AlfalfaGEDB | MS.gene045365

M. sativa cultivar XinJiangDaYe / MS.gene045365

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045365.t1	AES71924.1	95.7	92	4	0	1	92	1	92	1.20E-41	178.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045365.t1	P33080	71.7	92	26	0	1	92	1	92	5.8e-32	137.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045365.t1	G7JAQ7	95.7	92	4	0	1	92	1	92	8.8e-42	178.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045365	MS.gene50690	PPI
MS.gene045365	MS.gene057780	PPI
MS.gene045365	MS.gene057788	PPI
MS.gene045365	MS.gene50685	PPI
MS.gene045365	MS.gene003613	PPI
MS.gene045365	MS.gene50674	PPI
MS.gene045365	MS.gene057799	PPI
MS.gene062970	MS.gene045365	PPI
MS.gene045365	MS.gene003603	PPI
MS.gene045365	MS.gene003630	PPI
MS.gene062942	MS.gene045365	PPI
MS.gene003605	MS.gene045365	PPI
MS.gene045365	MS.gene057782	PPI
MS.gene045365	MS.gene057779	PPI
MS.gene045365	MS.gene50673	PPI
MS.gene045365	MS.gene50689	PPI
MS.gene045365	MS.gene50683	PPI
MS.gene23373	MS.gene045365	PPI
MS.gene045365	MS.gene062965	PPI
MS.gene045365	MS.gene50771	PPI
MS.gene062972	MS.gene045365	PPI
MS.gene045365	MS.gene50772	PPI
MS.gene045365	MS.gene022358	PPI
MS.gene045365	MS.gene057802	PPI
MS.gene045365	MS.gene057796	PPI
MS.gene045365	MS.gene062954	PPI
MS.gene045365	MS.gene23369	PPI
MS.gene045365	MS.gene003597	PPI
MS.gene045365	MS.gene062986	PPI
MS.gene045365	MS.gene057783	PPI
MS.gene045365	MS.gene50770	PPI
MS.gene045365	MS.gene057811	PPI
MS.gene045365	MS.gene057806	PPI
MS.gene045365	MS.gene77525	PPI
MS.gene045365	MS.gene062944	PPI
MS.gene045365	MS.gene50658	PPI
MS.gene045365	MS.gene003626	PPI
MS.gene045365	MS.gene50655	PPI
MS.gene045365	MS.gene28863	PPI
MS.gene045365	MS.gene003584	PPI
MS.gene045365	MS.gene057791	PPI
MS.gene045365	MS.gene057804	PPI
MS.gene045365	MS.gene003580	PPI
MS.gene045365	MS.gene062971	PPI
MS.gene045365	MS.gene50651	PPI
MS.gene062978	MS.gene045365	PPI
MS.gene045365	MS.gene003576	PPI
MS.gene045365	MS.gene062969	PPI
MS.gene045365	MS.gene062962	PPI
MS.gene045365	MS.gene50666	PPI
MS.gene045365	MS.gene062985	PPI
MS.gene045365	MS.gene057784	PPI
MS.gene003593	MS.gene045365	PPI
MS.gene045365	MS.gene062953	PPI
MS.gene045365	MS.gene23368	PPI
MS.gene045365	MS.gene062987	PPI
MS.gene045365	MS.gene057817	PPI
MS.gene045365	MS.gene70684	PPI
MS.gene045365	MS.gene062964	PPI
MS.gene045365	MS.gene062958	PPI
MS.gene045365	MS.gene057798	PPI
MS.gene057816	MS.gene045365	PPI
MS.gene045365	MS.gene003612	PPI
MS.gene045365	MS.gene062983	PPI
MS.gene045365	MS.gene057777	PPI
MS.gene045365	MS.gene062945	PPI
MS.gene045365	MS.gene062967	PPI
MS.gene045365	MS.gene003579	PPI
MS.gene045365	MS.gene062989	PPI
MS.gene045365	MS.gene003595	PPI
MS.gene045365	MS.gene50657	PPI
MS.gene045365	MS.gene003607	PPI
MS.gene045365	MS.gene50656	PPI
MS.gene045365	MS.gene003606	PPI
MS.gene045365	MS.gene50686	PPI
MS.gene045365	MS.gene057785	PPI
MS.gene045365	MS.gene70683	PPI
MS.gene045365	MS.gene50670	PPI
MS.gene045365	MS.gene50669	PPI
MS.gene045365	MS.gene70685	PPI
MS.gene045365	MS.gene003622	PPI
MS.gene045365	MS.gene057807	PPI
MS.gene045365	MS.gene062941	PPI
MS.gene045365	MS.gene003599	PPI
MS.gene045365	MS.gene50662	PPI
MS.gene045365	MS.gene003585	PPI
MS.gene045365	MS.gene50660	PPI
MS.gene045365	MS.gene003623	PPI
MS.gene045365	MS.gene50668	PPI
MS.gene045365	MS.gene003581	PPI
MS.gene045365	MS.gene003628	PPI
MS.gene045365	MS.gene003582	PPI
MS.gene045365	MS.gene057794	PPI
MS.gene045365	MS.gene50688	PPI
MS.gene045365	MS.gene003629	PPI
MS.gene062946	MS.gene045365	PPI
MS.gene045365	MS.gene062966	PPI
MS.gene045365	MS.gene062980	PPI
MS.gene045365	MS.gene23367	PPI
MS.gene045365	MS.gene062940	PPI
MS.gene045365	MS.gene003610	PPI
MS.gene045365	MS.gene057809	PPI
MS.gene045365	MS.gene062959	PPI
MS.gene045365	MS.gene50664	PPI
MS.gene045365	MS.gene50773	PPI
MS.gene045365	MS.gene50682	PPI
MS.gene062975	MS.gene045365	PPI
MS.gene045365	MS.gene057805	PPI
MS.gene045365	MS.gene057800	PPI
MS.gene045365	MS.gene50653	PPI
MS.gene045365	MS.gene003598	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045365.t1	MTR_3g084210	95.652	92	4	0	1	92	1	92	2.52e-55	166
MS.gene045365.t1	MTR_3g084250	82.609	92	16	0	1	92	1	92	1.14e-52	159
MS.gene045365.t1	MTR_3g084230	94.444	90	5	0	1	90	1	90	4.69e-52	158
MS.gene045365.t1	MTR_3g084160	90.217	92	9	0	1	92	1	92	1.75e-51	156
MS.gene045365.t1	MTR_8g461420	92.222	90	7	0	1	90	1	90	3.50e-51	155
MS.gene045365.t1	MTR_3g084190	88.043	92	11	0	1	92	1	92	5.20e-50	152
MS.gene045365.t1	MTR_3g110045	88.889	90	10	0	3	92	62	151	6.30e-47	147
MS.gene045365.t1	MTR_3g084150	70.652	92	27	0	1	92	1	92	2.13e-46	144
MS.gene045365.t1	MTR_4g072500	72.826	92	25	0	1	92	1	92	5.92e-46	142
MS.gene045365.t1	MTR_8g461410	69.565	92	28	0	1	92	1	92	1.44e-45	141
MS.gene045365.t1	MTR_3g084180	69.565	92	28	0	1	92	1	92	3.03e-45	140
MS.gene045365.t1	MTR_3g110042	73.563	87	23	0	1	87	1	87	1.97e-43	136
MS.gene045365.t1	MTR_4g072530	71.111	90	26	0	1	90	1	90	2.13e-43	136
MS.gene045365.t1	MTR_4g072480	68.478	92	29	0	1	92	1	92	7.90e-43	134
MS.gene045365.t1	MTR_3g084170	72.043	93	24	2	1	92	1	92	9.52e-43	134
MS.gene045365.t1	MTR_4g072640	71.111	90	26	0	1	90	1	90	9.95e-43	134
MS.gene045365.t1	MTR_4g050700	69.892	93	27	1	1	92	1	93	1.52e-42	134
MS.gene045365.t1	MTR_2g012410	69.892	93	27	1	1	92	1	93	1.52e-42	134
MS.gene045365.t1	MTR_4g072310	68.817	93	28	1	1	92	1	93	1.57e-42	134
MS.gene045365.t1	MTR_4g072620	66.304	92	31	0	1	92	1	92	8.00e-42	132
MS.gene045365.t1	MTR_4g072880	65.591	93	31	1	1	92	1	93	8.90e-42	132
MS.gene045365.t1	MTR_4g072570	68.478	92	29	0	1	92	1	92	9.23e-42	132
MS.gene045365.t1	MTR_3g084240	70.968	93	25	2	1	92	1	92	1.08e-41	132
MS.gene045365.t1	MTR_4g072680	67.391	92	30	0	1	92	1	92	1.90e-41	131
MS.gene045365.t1	MTR_4g072270	66.667	93	30	1	1	92	1	93	2.55e-41	131
MS.gene045365.t1	MTR_4g072730	65.934	91	31	0	1	91	1	91	5.16e-41	130
MS.gene045365.t1	MTR_3g110032	66.667	93	30	1	1	92	1	93	5.81e-41	130
MS.gene045365.t1	MTR_4g072860	66.667	93	30	1	1	92	1	93	1.32e-40	129
MS.gene045365.t1	MTR_4g072230	68.817	93	26	2	1	92	1	91	1.59e-40	129
MS.gene045365.t1	MTR_4g072250	69.892	93	26	2	1	92	1	92	1.69e-40	129
MS.gene045365.t1	MTR_4g072370	69.231	91	24	2	1	90	1	88	1.76e-40	129
MS.gene045365.t1	MTR_3g084220	68.817	93	27	2	1	92	1	92	2.37e-40	128
MS.gene045365.t1	MTR_4g072870	67.033	91	29	1	1	90	1	91	2.49e-40	128
MS.gene045365.t1	MTR_4g072330	65.556	90	29	1	1	90	1	88	5.09e-40	127
MS.gene045365.t1	MTR_3g117630	69.767	86	26	0	7	92	7	92	7.93e-40	127
MS.gene045365.t1	MTR_4g072830	68.539	89	26	1	1	89	1	87	8.52e-40	127
MS.gene045365.t1	MTR_4g072460	65.217	92	32	0	1	92	1	92	9.34e-40	127
MS.gene045365.t1	MTR_4g072240	65.934	91	30	1	1	90	1	91	1.60e-39	126
MS.gene045365.t1	MTR_4g072490	67.033	91	23	2	1	90	1	85	1.81e-39	126
MS.gene045365.t1	MTR_4g072740	68.132	91	22	2	1	90	1	85	3.17e-39	125
MS.gene045365.t1	MTR_3g110038	67.742	93	28	2	1	92	1	92	3.26e-39	125
MS.gene045365.t1	MTR_4g072630	67.778	90	25	1	1	90	1	86	7.59e-39	124
MS.gene045365.t1	MTR_4g072220	64.516	93	32	1	1	92	1	93	5.38e-38	122
MS.gene045365.t1	MTR_4g072300	63.736	91	32	1	1	90	1	91	7.45e-38	122
MS.gene045365.t1	MTR_4g072890	63.736	91	32	1	1	90	1	91	1.36e-37	121
MS.gene045365.t1	MTR_4g072260	62.366	93	34	1	1	92	1	93	1.48e-37	121
MS.gene045365.t1	MTR_3g084260	63.441	93	33	1	1	92	1	93	2.61e-37	120
MS.gene045365.t1	MTR_4g072470	67.033	91	23	2	1	90	1	85	3.62e-37	120
MS.gene045365.t1	MTR_4g072610	65.556	90	25	1	1	90	1	84	6.31e-37	119
MS.gene045365.t1	MTR_4g072820	68.889	90	23	1	1	90	1	85	8.21e-37	119
MS.gene045365.t1	MTR_4g072850	65.957	94	30	1	1	92	1	94	9.18e-37	119
MS.gene045365.t1	MTR_4g072600	66.667	90	25	1	1	90	1	85	9.63e-37	119
MS.gene045365.t1	MTR_4g072465	65.556	90	27	1	1	90	1	86	1.45e-36	119
MS.gene045365.t1	MTR_4g072580	64.835	91	25	2	1	90	1	85	3.92e-36	117
MS.gene045365.t1	MTR_4g072540	67.778	90	25	1	1	90	1	86	6.59e-36	117
MS.gene045365.t1	MTR_4g072650	64.444	90	26	1	1	90	1	84	1.30e-35	116
MS.gene045365.t1	MTR_4g072590	67.778	90	24	1	1	90	1	85	1.44e-35	116
MS.gene045365.t1	MTR_4g072670	66.667	90	26	1	1	90	1	86	1.75e-35	116
MS.gene045365.t1	MTR_4g072660	60.870	92	31	1	1	92	1	87	2.15e-35	115
MS.gene045365.t1	MTR_4g072720	67.778	90	25	1	1	90	1	86	4.54e-35	115
MS.gene045365.t1	MTR_4g072510	64.444	90	28	1	1	90	1	86	2.51e-34	113
MS.gene045365.t1	MTR_4g072380	64.835	91	26	2	1	90	1	86	1.28e-33	111
MS.gene045365.t1	MTR_5g008360	65.823	79	27	0	14	92	5	83	4.21e-33	110
MS.gene045365.t1	MTR_4g072450	65.556	90	26	1	1	90	1	85	1.10e-32	108
MS.gene045365.t1	MTR_4g072690	65.556	90	26	1	1	90	1	85	3.70e-32	107
MS.gene045365.t1	MTR_4g072940	64.444	90	30	1	3	90	33	122	6.94e-32	108
MS.gene045365.t1	MTR_5g008370	58.242	91	38	0	1	91	1	91	1.03e-31	108
MS.gene045365.t1	MTR_4g072980	54.737	95	40	2	1	92	1	95	3.58e-31	105
MS.gene045365.t1	MTR_3g110035	74.242	66	17	0	27	92	73	138	2.70e-30	104
MS.gene045365.t1	MTR_5g008350	61.250	80	24	2	1	79	1	74	3.60e-30	102
MS.gene045365.t1	MTR_4g072550	59.036	83	33	1	10	92	22	103	1.56e-29	101
MS.gene045365.t1	MTR_4g072910	56.627	83	36	0	8	90	18	100	2.69e-29	100
MS.gene045365.t1	MTR_3g084200	67.123	73	22	2	1	72	1	72	4.39e-29	100
MS.gene045365.t1	MTR_4g072750	62.500	80	28	1	1	78	1	80	8.27e-28	96.7
MS.gene045365.t1	MTR_4g072770	55.556	90	30	1	1	90	1	80	8.72e-28	96.7
MS.gene045365.t1	MTR_4g072560	49.485	97	41	3	1	89	1	97	9.32e-28	97.1
MS.gene045365.t1	MTR_4g072280	58.667	75	30	1	1	74	1	75	7.84e-27	94.0
MS.gene045365.t1	MTR_4g072290	54.839	93	27	2	1	92	1	79	1.02e-25	91.3
MS.gene045365.t1	MTR_3g117640	60.870	69	26	1	24	91	33	101	3.81e-25	90.5
MS.gene045365.t1	MTR_3g117610	49.451	91	37	2	7	89	19	108	6.21e-23	85.1
MS.gene045365.t1	MTR_3g113310	57.353	68	28	1	22	89	39	105	4.61e-22	82.8
MS.gene045365.t1	MTR_4g072190	50.602	83	38	2	7	89	20	99	1.26e-21	81.6
MS.gene045365.t1	MTR_4g072930	49.383	81	35	2	16	90	30	110	4.07e-21	80.5
MS.gene045365.t1	MTR_8g461400	51.613	93	17	3	1	92	1	66	4.98e-21	79.0
MS.gene045365.t1	MTR_6g077850	50.746	67	33	0	24	90	33	99	1.55e-20	78.6
MS.gene045365.t1	MTR_5g021820	45.977	87	42	2	7	89	18	103	2.10e-19	75.9
MS.gene045365.t1	MTR_8g076040	45.977	87	42	2	7	89	19	104	2.62e-19	75.9
MS.gene045365.t1	MTR_4g072840	49.451	91	14	3	1	90	1	60	1.80e-18	72.4
MS.gene045365.t1	MTR_4g025830	50.617	81	30	4	5	82	65	138	1.97e-18	75.1
MS.gene045365.t1	MTR_2g043960	44.565	92	41	2	2	84	44	134	7.98e-18	73.6
MS.gene045365.t1	MTR_4g124750	45.570	79	42	1	11	89	55	132	2.15e-17	72.4
MS.gene045365.t1	MTR_1g094750	47.500	80	38	2	8	84	30	108	5.21e-16	67.8
MS.gene045365.t1	MTR_1g024085	44.872	78	40	2	7	82	17	93	8.25e-16	67.8
MS.gene045365.t1	MTR_4g072160	55.357	56	24	1	24	79	36	90	8.41e-16	67.8
MS.gene045365.t1	MTR_4g005310	50.000	72	33	2	13	82	50	120	1.64e-15	67.4
MS.gene045365.t1	MTR_8g461210	45.333	75	40	1	8	82	18	91	2.93e-15	65.9
MS.gene045365.t1	MTR_0388s0020	47.143	70	33	2	12	78	62	130	3.34e-15	66.6
MS.gene045365.t1	MTR_1g063950	46.479	71	37	1	13	83	36	105	7.67e-15	64.7
MS.gene045365.t1	MTR_1g009150	48.529	68	34	1	15	82	61	127	1.07e-14	65.9
MS.gene045365.t1	MTR_7g101740	46.053	76	40	1	13	88	28	102	1.18e-14	64.3
MS.gene045365.t1	MTR_1g061570	52.542	59	27	1	24	82	18	75	2.72e-14	63.5
MS.gene045365.t1	MTR_7g118010	44.118	68	35	2	25	90	23	89	4.67e-13	59.7
MS.gene045365.t1	MTR_4g005320	50.000	58	28	1	25	82	70	126	8.25e-13	60.5
MS.gene045365.t1	MTR_7g405740	40.244	82	42	3	6	82	44	123	1.61e-12	59.7
MS.gene045365.t1	MTR_3g109160	46.269	67	35	1	25	91	69	134	3.93e-12	58.9
MS.gene045365.t1	MTR_3g092220	42.647	68	36	2	17	82	25	91	1.26e-11	56.2
MS.gene045365.t1	MTR_8g026730	41.176	68	37	2	25	90	27	93	2.45e-11	55.5
MS.gene045365.t1	MTR_3g097120	43.836	73	32	2	20	84	4	75	4.16e-11	54.7
MS.gene045365.t1	MTR_2g066830	39.286	84	38	3	2	82	41	114	4.25e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045365.t1	AT4G38840	50.505	99	40	2	1	90	1	99	9.18e-29	99.8
MS.gene045365.t1	AT2G21210	52.632	95	40	2	1	90	1	95	1.02e-28	99.4
MS.gene045365.t1	AT2G21200	63.889	72	25	1	19	89	15	86	1.67e-28	98.6
MS.gene045365.t1	AT4G34770	63.158	76	26	1	18	91	28	103	2.30e-28	98.6
MS.gene045365.t1	AT2G21210	52.632	95	40	2	1	90	68	162	4.88e-28	99.8
MS.gene045365.t1	AT4G34800	58.750	80	27	2	14	90	10	86	1.50e-27	96.3
MS.gene045365.t1	AT5G18020	57.534	73	30	1	16	87	15	87	1.34e-26	94.0
MS.gene045365.t1	AT4G34810	68.254	63	16	1	25	83	48	110	1.40e-26	94.7
MS.gene045365.t1	AT3G03820	57.895	76	29	1	19	91	21	96	1.43e-26	94.0
MS.gene045365.t1	AT5G18080	55.263	76	33	1	16	90	15	90	4.03e-26	92.8
MS.gene045365.t1	AT4G38850	53.571	84	26	2	7	87	13	86	5.88e-26	92.0
MS.gene045365.t1	AT5G18010	53.947	76	34	1	16	90	15	90	8.49e-26	91.7
MS.gene045365.t1	AT3G03840	57.534	73	29	1	21	91	23	95	1.23e-25	91.7
MS.gene045365.t1	AT5G18050	53.947	76	34	1	16	90	15	90	1.33e-25	91.3
MS.gene045365.t1	AT5G18060	55.263	76	33	1	16	90	15	90	1.40e-25	91.3
MS.gene045365.t1	AT5G18030	50.588	85	32	2	7	90	13	88	3.72e-25	90.1
MS.gene045365.t1	AT4G38825	54.667	75	33	1	17	90	15	89	5.92e-25	89.7
MS.gene045365.t1	AT3G03850	61.765	68	24	1	26	91	26	93	1.14e-24	89.0
MS.gene045365.t1	AT4G38860	50.000	88	40	1	7	90	18	105	4.95e-24	87.8
MS.gene045365.t1	AT4G34790	64.516	62	20	1	25	84	39	100	1.57e-23	86.7
MS.gene045365.t1	AT2G21220	50.575	87	38	2	7	89	18	103	1.50e-22	84.0
MS.gene045365.t1	AT4G13790	48.193	83	35	2	7	87	13	89	1.10e-21	81.6
MS.gene045365.t1	AT1G75580	50.617	81	39	1	9	89	28	107	4.42e-21	80.5
MS.gene045365.t1	AT4G34780	55.714	70	28	1	23	89	26	95	1.26e-20	79.3
MS.gene045365.t1	AT3G03830	50.000	76	35	1	18	90	17	92	3.40e-20	77.8
MS.gene045365.t1	AT4G34760	56.716	67	28	1	23	89	41	106	5.52e-20	77.8
MS.gene045365.t1	AT4G36110	48.235	85	41	2	7	89	20	103	5.87e-20	77.4
MS.gene045365.t1	AT3G43120	46.250	80	42	1	3	82	57	135	8.51e-19	75.9
MS.gene045365.t1	AT5G20810	51.389	72	34	1	11	82	65	135	3.53e-18	74.7
MS.gene045365.t1	AT5G20810	51.389	72	34	1	11	82	65	135	3.88e-18	75.1
MS.gene045365.t1	AT1G19830	46.591	88	34	2	7	82	18	104	3.95e-18	73.2
MS.gene045365.t1	AT2G16580	53.731	67	30	1	23	89	42	107	4.27e-18	72.8
MS.gene045365.t1	AT5G66260	48.810	84	39	2	10	90	16	98	4.30e-17	70.1
MS.gene045365.t1	AT2G18010	53.030	66	30	1	24	89	47	111	4.39e-17	70.5
MS.gene045365.t1	AT1G75590	48.000	75	36	2	10	82	25	98	6.18e-16	68.6
MS.gene045365.t1	AT3G20220	47.887	71	35	2	13	82	35	104	6.52e-16	67.4
MS.gene045365.t1	AT2G45210	52.459	61	25	2	20	77	74	133	9.64e-16	68.2
MS.gene045365.t1	AT5G10990	43.038	79	41	2	7	82	20	97	4.16e-15	66.2
MS.gene045365.t1	AT1G19840	45.570	79	39	2	7	82	20	97	7.89e-15	65.5
MS.gene045365.t1	AT2G37030	50.000	62	30	1	24	85	48	108	7.95e-15	65.1
MS.gene045365.t1	AT4G34750	47.458	59	30	1	24	82	36	93	4.31e-14	63.5
MS.gene045365.t1	AT4G34750	47.458	59	30	1	24	82	36	93	4.31e-14	63.5
MS.gene045365.t1	AT3G60690	47.059	68	32	2	25	89	88	154	4.78e-14	63.9
MS.gene045365.t1	AT3G61900	39.286	84	47	2	10	90	15	97	6.92e-14	62.8
MS.gene045365.t1	AT3G51200	40.698	86	46	3	7	92	23	103	3.82e-13	60.1
MS.gene045365.t1	AT2G46690	39.744	78	43	2	17	91	16	92	4.27e-13	60.5
MS.gene045365.t1	AT4G00880	46.377	69	34	2	24	90	27	94	1.78e-12	58.9
MS.gene045365.t1	AT3G53250	41.270	63	33	1	24	86	51	109	4.16e-12	57.8
MS.gene045365.t1	AT3G53250	41.270	63	33	1	24	86	82	140	5.75e-12	58.2
MS.gene045365.t1	AT4G09530	44.286	70	33	3	16	82	22	88	7.47e-12	56.6
MS.gene045365.t1	AT3G12830	43.662	71	38	2	13	82	37	106	8.94e-12	57.4
MS.gene045365.t1	AT5G53590	41.667	72	36	2	24	90	45	115	1.02e-11	57.4
MS.gene045365.t1	AT2G24400	50.000	58	28	1	25	82	64	120	1.77e-11	57.4
MS.gene045365.t1	AT4G31320	48.276	58	29	1	25	82	80	136	2.23e-11	57.4
MS.gene045365.t1	AT4G22620	42.647	68	35	2	18	82	72	138	6.54e-11	55.5
MS.gene045365.t1	AT1G56150	46.552	58	30	1	25	82	38	94	9.08e-11	54.3

Find 19 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCCAAGCTGAAGAGGAATT+TGG	0.271127	3.4:+78891074	MS.gene045365:CDS
TGCTCATTCAAGAATGATAT+TGG	0.293309	3.4:-78891032	None:intergenic
TAAGAATACGTCTTCCTTGC+AGG	0.307779	3.4:-78891129	None:intergenic
TACACTGCAAGATGGCCTTT+TGG	0.332894	3.4:-78890978	None:intergenic
GATGATGATCTTCTAATAAC+AGG	0.376829	3.4:-78890918	None:intergenic
ATTTGGTTATTGTCATCCAA+TGG	0.460408	3.4:+78891091	MS.gene045365:CDS
TTTGGTTATTGTCATCCAAT+GGG	0.488777	3.4:+78891092	MS.gene045365:CDS
AACCAAATTCCTCTTCAGCT+TGG	0.499563	3.4:-78891076	None:intergenic
ATTGCTTAGCCAAGCTGAAG+AGG	0.528923	3.4:+78891067	MS.gene045365:CDS
GGCCATCTTGCAGTGTATGT+TGG	0.549018	3.4:+78890984	MS.gene045365:CDS
AAACAAGTGGAAGTCCCAAA+AGG	0.554243	3.4:+78890963	MS.gene045365:CDS
TCAATCATCTAGCAAACAAG+TGG	0.562035	3.4:+78890950	MS.gene045365:CDS
GGTTATTGTCATCCAATGGG+TGG	0.563773	3.4:+78891095	MS.gene045365:CDS
AAGAATACGTCTTCCTTGCA+GGG	0.578410	3.4:-78891128	None:intergenic
GGAATTGTGAGACCACCCAT+TGG	0.586231	3.4:-78891107	None:intergenic
TGGTCTCACAATTCCCTGCA+AGG	0.602403	3.4:+78891115	MS.gene045365:CDS
CTCCAACATACACTGCAAGA+TGG	0.603726	3.4:-78890986	None:intergenic
CATACAGCTTCTCTTCTGAA+CGG	0.650400	3.4:+78891152	MS.gene045365:CDS
ATGTTGGAGAGAAAATGAGA+AGG	0.713407	3.4:+78891000	MS.gene045365:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATTTGGTTATTGTCATCCAA+TGG	+	chr3.4:78891091-78891110	MS.gene045365:CDS	30.0%
	GATGATGATCTTCTAATAAC+AGG	-	chr3.4:78890921-78890940	None:intergenic	30.0%
	TGCTCATTCAAGAATGATAT+TGG	-	chr3.4:78891035-78891054	None:intergenic	30.0%
	TTTGGTTATTGTCATCCAAT+GGG	+	chr3.4:78891092-78891111	MS.gene045365:CDS	30.0%
	ATGTTGGAGAGAAAATGAGA+AGG	+	chr3.4:78891000-78891019	MS.gene045365:CDS	35.0%
	TCAATCATCTAGCAAACAAG+TGG	+	chr3.4:78890950-78890969	MS.gene045365:CDS	35.0%
	AAACAAGTGGAAGTCCCAAA+AGG	+	chr3.4:78890963-78890982	MS.gene045365:CDS	40.0%
	AACCAAATTCCTCTTCAGCT+TGG	-	chr3.4:78891079-78891098	None:intergenic	40.0%
	AAGAATACGTCTTCCTTGCA+GGG	-	chr3.4:78891131-78891150	None:intergenic	40.0%
	CATACAGCTTCTCTTCTGAA+CGG	+	chr3.4:78891152-78891171	MS.gene045365:CDS	40.0%
	TAAGAATACGTCTTCCTTGC+AGG	-	chr3.4:78891132-78891151	None:intergenic	40.0%
	AGCCAAGCTGAAGAGGAATT+TGG	+	chr3.4:78891074-78891093	MS.gene045365:CDS	45.0%
	ATTGCTTAGCCAAGCTGAAG+AGG	+	chr3.4:78891067-78891086	MS.gene045365:CDS	45.0%
	CTCCAACATACACTGCAAGA+TGG	-	chr3.4:78890989-78891008	None:intergenic	45.0%
	GGTTATTGTCATCCAATGGG+TGG	+	chr3.4:78891095-78891114	MS.gene045365:CDS	45.0%
!	ACACTGCAAGATGGCCTTTT+GGG	-	chr3.4:78890980-78890999	None:intergenic	45.0%
!	TACACTGCAAGATGGCCTTT+TGG	-	chr3.4:78890981-78891000	None:intergenic	45.0%
	GGAATTGTGAGACCACCCAT+TGG	-	chr3.4:78891110-78891129	None:intergenic	50.0%
	GGCCATCTTGCAGTGTATGT+TGG	+	chr3.4:78890984-78891003	MS.gene045365:CDS	50.0%
	TGGTCTCACAATTCCCTGCA+AGG	+	chr3.4:78891115-78891134	MS.gene045365:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	78890903	78891181	78890903	ID=MS.gene045365
chr3.4	mRNA	78890903	78891181	78890903	ID=MS.gene045365.t1;Parent=MS.gene045365
chr3.4	exon	78890903	78891181	78890903	ID=MS.gene045365.t1.exon1;Parent=MS.gene045365.t1
chr3.4	CDS	78890903	78891181	78890903	ID=cds.MS.gene045365.t1;Parent=MS.gene045365.t1

Gene Sequence	>MS.gene045365 ATGGGTTTTCGCTTACCTGTTATTAGAAGATCATCATCTAGTGCAAGTCAATCATCTAGCAAACAAGTGGAAGTCCCAAAAGGCCATCTTGCAGTGTATGTTGGAGAGAAAATGAGAAGGTTCATGATTCCAATATCATTCTTGAATGAGCATTTATTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAATTTGGTTATTGTCATCCAATGGGTGGTCTCACAATTCCCTGCAAGGAAGACGTATTCTTACATACAGCTTCTCTTCTGAACGGTCTATAA
Protein sequence	>MS.gene045365.t1 MGFRLPVIRRSSSSASQSSSKQVEVPKGHLAVYVGEKMRRFMIPISFLNEHLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASLLNGL