AlfalfaGEDB | MS.gene003594

M. sativa cultivar XinJiangDaYe / MS.gene003594

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003594.t1	AES89319.1	89.4	85	9	0	1	85	1	85	2.90E-37	164.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003594.t1	P33080	67.8	90	24	1	1	85	1	90	3.8e-30	131.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003594.t1	G7JL44	89.4	85	9	0	1	85	1	85	2.1e-37	164.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003594	MS.gene057782	PPI
MS.gene003594	MS.gene057779	PPI
MS.gene003594	MS.gene50673	PPI
MS.gene003594	MS.gene50689	PPI
MS.gene003594	MS.gene062965	PPI
MS.gene003594	MS.gene022358	PPI
MS.gene003594	MS.gene062954	PPI
MS.gene003594	MS.gene23369	PPI
MS.gene057816	MS.gene003594	PPI
MS.gene003594	MS.gene062986	PPI
MS.gene003594	MS.gene057783	PPI
MS.gene003594	MS.gene50770	PPI
MS.gene003594	MS.gene062987	PPI
MS.gene003594	MS.gene057811	PPI
MS.gene003594	MS.gene50771	PPI
MS.gene003594	MS.gene057806	PPI
MS.gene003594	MS.gene062964	PPI
MS.gene003594	MS.gene77525	PPI
MS.gene003594	MS.gene062944	PPI
MS.gene003594	MS.gene50658	PPI
MS.gene003594	MS.gene003626	PPI
MS.gene003594	MS.gene50655	PPI
MS.gene003594	MS.gene28863	PPI
MS.gene003594	MS.gene062945	PPI
MS.gene003594	MS.gene057804	PPI
MS.gene003594	MS.gene003580	PPI
MS.gene003594	MS.gene062971	PPI
MS.gene003594	MS.gene50651	PPI
MS.gene003594	MS.gene50656	PPI
MS.gene003594	MS.gene062969	PPI
MS.gene003594	MS.gene062962	PPI
MS.gene003594	MS.gene50666	PPI
MS.gene003594	MS.gene062985	PPI
MS.gene003594	MS.gene057784	PPI
MS.gene003594	MS.gene062953	PPI
MS.gene003594	MS.gene003622	PPI
MS.gene062946	MS.gene003594	PPI
MS.gene003594	MS.gene003599	PPI
MS.gene003594	MS.gene23368	PPI
MS.gene003594	MS.gene003585	PPI
MS.gene003605	MS.gene003594	PPI
MS.gene003594	MS.gene057817	PPI
MS.gene003594	MS.gene50668	PPI
MS.gene003594	MS.gene003581	PPI
MS.gene003594	MS.gene70684	PPI
MS.gene003594	MS.gene062958	PPI
MS.gene003594	MS.gene057798	PPI
MS.gene003594	MS.gene003612	PPI
MS.gene23373	MS.gene003594	PPI
MS.gene003594	MS.gene062983	PPI
MS.gene003594	MS.gene057777	PPI
MS.gene003594	MS.gene062967	PPI
MS.gene003594	MS.gene003579	PPI
MS.gene003594	MS.gene062940	PPI
MS.gene062975	MS.gene003594	PPI
MS.gene003594	MS.gene062989	PPI
MS.gene003594	MS.gene003595	PPI
MS.gene003594	MS.gene50657	PPI
MS.gene003594	MS.gene062959	PPI
MS.gene003594	MS.gene003607	PPI
MS.gene003594	MS.gene003606	PPI
MS.gene003594	MS.gene50686	PPI
MS.gene003594	MS.gene50664	PPI
MS.gene003594	MS.gene057785	PPI
MS.gene003594	MS.gene70683	PPI
MS.gene003594	MS.gene50670	PPI
MS.gene003594	MS.gene50669	PPI
MS.gene003594	MS.gene70685	PPI
MS.gene003594	MS.gene057807	PPI
MS.gene003594	MS.gene062941	PPI
MS.gene062970	MS.gene003594	PPI
MS.gene062942	MS.gene003594	PPI
MS.gene003594	MS.gene50662	PPI
MS.gene003594	MS.gene50660	PPI
MS.gene003594	MS.gene003623	PPI
MS.gene003594	MS.gene057799	PPI
MS.gene003594	MS.gene003628	PPI
MS.gene003594	MS.gene003582	PPI
MS.gene003594	MS.gene057794	PPI
MS.gene003594	MS.gene50688	PPI
MS.gene003594	MS.gene003629	PPI
MS.gene062972	MS.gene003594	PPI
MS.gene003594	MS.gene062966	PPI
MS.gene003594	MS.gene062980	PPI
MS.gene003594	MS.gene23367	PPI
MS.gene003594	MS.gene50683	PPI
MS.gene003594	MS.gene003610	PPI
MS.gene003594	MS.gene057809	PPI
MS.gene003594	MS.gene50772	PPI
MS.gene003594	MS.gene057802	PPI
MS.gene003594	MS.gene50773	PPI
MS.gene003594	MS.gene057796	PPI
MS.gene003594	MS.gene50682	PPI
MS.gene003594	MS.gene057805	PPI
MS.gene003594	MS.gene057800	PPI
MS.gene003594	MS.gene50653	PPI
MS.gene003594	MS.gene003597	PPI
MS.gene003594	MS.gene003598	PPI
MS.gene003594	MS.gene50690	PPI
MS.gene003594	MS.gene057780	PPI
MS.gene003594	MS.gene057788	PPI
MS.gene062978	MS.gene003594	PPI
MS.gene003594	MS.gene50685	PPI
MS.gene003594	MS.gene003613	PPI
MS.gene003594	MS.gene003584	PPI
MS.gene003594	MS.gene057791	PPI
MS.gene003594	MS.gene50674	PPI
MS.gene003593	MS.gene003594	PPI
MS.gene003594	MS.gene003603	PPI
MS.gene003594	MS.gene003630	PPI
MS.gene003594	MS.gene003576	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003594.t1	MTR_4g072490	89.412	85	9	0	1	85	1	85	5.98e-56	167
MS.gene003594.t1	MTR_4g072740	89.412	85	9	0	1	85	1	85	2.29e-54	163
MS.gene003594.t1	MTR_4g072465	88.372	86	9	1	1	85	1	86	7.67e-53	159
MS.gene003594.t1	MTR_4g072630	84.884	86	12	1	1	85	1	86	8.31e-52	157
MS.gene003594.t1	MTR_4g072470	85.882	85	12	0	1	85	1	85	5.27e-51	155
MS.gene003594.t1	MTR_4g072580	82.353	85	15	0	1	85	1	85	1.78e-49	151
MS.gene003594.t1	MTR_4g072370	81.818	88	13	1	1	85	1	88	7.42e-49	149
MS.gene003594.t1	MTR_4g072830	83.908	87	11	1	1	84	1	87	8.66e-49	149
MS.gene003594.t1	MTR_4g072720	88.372	86	9	1	1	85	1	86	1.54e-47	146
MS.gene003594.t1	MTR_4g072540	86.047	86	11	1	1	85	1	86	1.25e-46	144
MS.gene003594.t1	MTR_4g072600	78.824	85	18	0	1	85	1	85	1.42e-46	144
MS.gene003594.t1	MTR_4g072670	87.209	86	10	1	1	85	1	86	2.17e-46	143
MS.gene003594.t1	MTR_4g072510	83.721	86	13	1	1	85	1	86	6.57e-46	142
MS.gene003594.t1	MTR_3g084170	74.444	90	18	1	1	85	1	90	8.03e-46	142
MS.gene003594.t1	MTR_4g072330	75.000	88	19	1	1	85	1	88	4.05e-45	140
MS.gene003594.t1	MTR_3g084240	73.333	90	19	1	1	85	1	90	8.50e-45	139
MS.gene003594.t1	MTR_4g072610	76.471	85	19	1	1	85	1	84	3.34e-44	137
MS.gene003594.t1	MTR_4g072650	77.647	85	18	1	1	85	1	84	3.34e-44	137
MS.gene003594.t1	MTR_3g084150	71.111	90	21	1	1	85	1	90	5.49e-44	137
MS.gene003594.t1	MTR_3g084220	71.111	90	21	1	1	85	1	90	1.46e-43	136
MS.gene003594.t1	MTR_4g072870	69.231	91	22	1	1	85	1	91	1.48e-43	136
MS.gene003594.t1	MTR_4g072590	83.529	85	14	0	1	85	1	85	3.40e-43	135
MS.gene003594.t1	MTR_3g084180	70.000	90	22	1	1	85	1	90	4.98e-43	135
MS.gene003594.t1	MTR_3g110032	71.429	91	20	1	1	85	1	91	9.70e-43	134
MS.gene003594.t1	MTR_3g110038	70.000	90	22	1	1	85	1	90	1.27e-42	134
MS.gene003594.t1	MTR_5g008350	81.081	74	14	0	1	74	1	74	1.35e-42	133
MS.gene003594.t1	MTR_4g072880	70.330	91	21	1	1	85	1	91	1.46e-42	134
MS.gene003594.t1	MTR_4g072690	82.353	85	15	0	1	85	1	85	2.73e-42	132
MS.gene003594.t1	MTR_8g461410	67.778	90	24	1	1	85	1	90	2.95e-42	133
MS.gene003594.t1	MTR_4g072380	76.744	86	19	1	1	85	1	86	3.00e-42	133
MS.gene003594.t1	MTR_4g072310	71.429	91	20	1	1	85	1	91	3.46e-42	132
MS.gene003594.t1	MTR_4g050700	70.330	91	21	1	1	85	1	91	3.86e-42	132
MS.gene003594.t1	MTR_2g012410	70.330	91	21	1	1	85	1	91	3.86e-42	132
MS.gene003594.t1	MTR_4g072450	82.353	85	15	0	1	85	1	85	1.60e-41	130
MS.gene003594.t1	MTR_4g072250	72.527	91	18	2	1	85	1	90	1.34e-40	129
MS.gene003594.t1	MTR_4g072820	75.581	86	19	2	1	85	1	85	1.78e-40	128
MS.gene003594.t1	MTR_4g072480	67.778	90	24	1	1	85	1	90	1.86e-40	128
MS.gene003594.t1	MTR_4g072860	71.429	91	20	1	1	85	1	91	2.36e-40	128
MS.gene003594.t1	MTR_4g072270	67.033	91	24	1	1	85	1	91	8.08e-40	127
MS.gene003594.t1	MTR_3g110042	69.663	89	22	1	1	84	1	89	8.20e-40	127
MS.gene003594.t1	MTR_4g072240	63.736	91	27	1	1	85	1	91	1.81e-39	125
MS.gene003594.t1	MTR_3g084260	67.033	91	24	1	1	85	1	91	3.25e-39	125
MS.gene003594.t1	MTR_4g072850	70.652	92	20	1	1	85	1	92	3.28e-39	125
MS.gene003594.t1	MTR_4g072620	64.444	90	27	1	1	85	1	90	5.78e-39	124
MS.gene003594.t1	MTR_4g072680	65.556	90	26	1	1	85	1	90	1.02e-38	124
MS.gene003594.t1	MTR_4g072230	70.330	91	19	2	1	85	1	89	1.36e-38	124
MS.gene003594.t1	MTR_4g072500	68.132	91	22	2	1	85	1	90	2.33e-38	123
MS.gene003594.t1	MTR_3g084250	66.667	90	25	1	1	85	1	90	2.62e-38	123
MS.gene003594.t1	MTR_4g072570	66.667	90	25	1	1	85	1	90	3.13e-38	122
MS.gene003594.t1	MTR_4g072220	62.637	91	28	1	1	85	1	91	3.84e-38	122
MS.gene003594.t1	MTR_3g117630	69.318	88	21	1	4	85	3	90	3.94e-38	122
MS.gene003594.t1	MTR_4g072890	61.538	91	29	1	1	85	1	91	4.71e-38	122
MS.gene003594.t1	MTR_4g072640	68.132	91	22	2	1	85	1	90	7.86e-38	122
MS.gene003594.t1	MTR_4g072300	61.538	91	29	1	1	85	1	91	8.71e-38	121
MS.gene003594.t1	MTR_4g072660	63.529	85	31	0	1	85	1	85	1.09e-37	121
MS.gene003594.t1	MTR_4g072260	60.440	91	30	1	1	85	1	91	2.42e-37	120
MS.gene003594.t1	MTR_4g072730	62.222	90	29	1	1	85	1	90	3.10e-37	120
MS.gene003594.t1	MTR_4g072530	65.934	91	24	2	1	85	1	90	3.48e-37	120
MS.gene003594.t1	MTR_4g072460	63.333	90	28	1	1	85	1	90	3.94e-37	120
MS.gene003594.t1	MTR_3g084210	66.667	90	25	1	1	85	1	90	5.36e-37	119
MS.gene003594.t1	MTR_3g084190	65.556	90	26	1	1	85	1	90	1.15e-36	119
MS.gene003594.t1	MTR_8g461420	66.667	90	25	1	1	85	1	90	1.22e-36	119
MS.gene003594.t1	MTR_3g110045	68.182	88	23	1	3	85	62	149	5.34e-36	119
MS.gene003594.t1	MTR_3g084230	65.556	90	26	1	1	85	1	90	6.68e-36	117
MS.gene003594.t1	MTR_3g084160	65.934	91	24	2	1	85	1	90	1.79e-35	115
MS.gene003594.t1	MTR_5g008360	67.949	78	25	0	8	85	4	81	5.50e-35	114
MS.gene003594.t1	MTR_5g008370	64.444	90	27	1	1	85	1	90	5.09e-34	114
MS.gene003594.t1	MTR_4g072940	66.667	90	23	1	3	85	33	122	8.30e-34	112
MS.gene003594.t1	MTR_3g084200	69.444	72	17	1	1	67	1	72	3.63e-32	108
MS.gene003594.t1	MTR_4g072560	55.670	97	30	3	1	84	1	97	1.31e-31	106
MS.gene003594.t1	MTR_4g072980	54.348	92	34	2	1	84	1	92	2.35e-31	105
MS.gene003594.t1	MTR_4g072770	61.176	85	28	1	1	85	1	80	2.95e-30	102
MS.gene003594.t1	MTR_4g072910	66.234	77	24	1	9	85	26	100	3.28e-30	102
MS.gene003594.t1	MTR_3g117640	50.000	100	35	2	1	85	1	100	4.68e-29	100
MS.gene003594.t1	MTR_4g072550	61.972	71	27	0	15	85	31	101	1.34e-28	99.0
MS.gene003594.t1	MTR_4g072290	60.000	85	26	1	1	85	1	77	1.56e-28	98.2
MS.gene003594.t1	MTR_3g110035	62.500	64	24	0	22	85	73	136	1.44e-24	89.7
MS.gene003594.t1	MTR_4g072750	63.514	74	18	2	1	66	1	73	1.47e-24	88.2
MS.gene003594.t1	MTR_4g072280	56.000	75	27	1	1	69	1	75	2.75e-23	84.7
MS.gene003594.t1	MTR_6g077850	55.224	67	30	0	19	85	33	99	1.54e-22	83.6
MS.gene003594.t1	MTR_4g072190	51.220	82	35	2	5	82	17	97	1.64e-22	83.6
MS.gene003594.t1	MTR_4g072930	51.250	80	35	1	10	85	31	110	1.84e-22	83.6
MS.gene003594.t1	MTR_3g113310	55.224	67	29	1	18	84	40	105	4.58e-22	82.4
MS.gene003594.t1	MTR_3g117610	58.462	65	26	1	18	82	43	106	4.90e-22	82.4
MS.gene003594.t1	MTR_8g461400	47.778	90	16	2	1	85	1	64	9.68e-21	78.2
MS.gene003594.t1	MTR_4g072840	50.000	86	16	3	1	85	1	60	3.90e-19	73.9
MS.gene003594.t1	MTR_5g021820	54.545	66	29	1	19	84	39	103	6.23e-19	74.3
MS.gene003594.t1	MTR_8g076040	56.250	64	27	1	19	82	40	102	1.69e-18	73.6
MS.gene003594.t1	MTR_4g124750	55.932	59	25	1	19	77	68	125	3.12e-17	71.6
MS.gene003594.t1	MTR_2g043960	55.932	59	25	1	19	77	75	132	5.06e-17	71.2
MS.gene003594.t1	MTR_1g009150	53.623	69	31	1	12	80	63	130	6.82e-17	71.2
MS.gene003594.t1	MTR_1g094750	54.839	62	27	1	19	80	49	109	2.15e-16	68.6
MS.gene003594.t1	MTR_4g005320	52.459	61	28	1	20	80	70	129	4.38e-15	66.2
MS.gene003594.t1	MTR_4g005310	46.970	66	34	1	16	80	58	123	4.81e-15	65.9
MS.gene003594.t1	MTR_4g025830	47.059	68	32	2	20	84	79	145	1.11e-14	65.1
MS.gene003594.t1	MTR_3g109160	49.351	77	38	1	4	80	53	128	1.27e-14	65.1
MS.gene003594.t1	MTR_3g105900	69.048	42	13	0	19	60	1171	1212	1.46e-14	67.4
MS.gene003594.t1	MTR_1g063950	45.588	68	36	1	13	80	41	107	1.54e-14	63.9
MS.gene003594.t1	MTR_3g092220	41.558	77	42	2	3	77	16	91	1.71e-14	63.5
MS.gene003594.t1	MTR_7g101740	50.000	64	31	1	19	82	39	101	1.89e-14	63.5
MS.gene003594.t1	MTR_7g118010	49.231	65	30	2	20	82	23	86	2.44e-14	62.8
MS.gene003594.t1	MTR_1g061570	49.315	73	34	2	10	80	7	78	2.68e-14	63.2
MS.gene003594.t1	MTR_0388s0020	42.857	77	40	2	11	84	66	141	4.70e-14	63.2
MS.gene003594.t1	MTR_1g024085	43.902	82	37	3	4	77	13	93	7.50e-14	62.8
MS.gene003594.t1	MTR_5g008380	84.375	32	5	0	54	85	246	277	1.57e-13	63.9
MS.gene003594.t1	MTR_4g072160	46.479	71	37	1	10	80	27	96	2.39e-13	61.2
MS.gene003594.t1	MTR_8g026730	43.077	65	34	2	20	82	27	90	4.92e-12	57.0
MS.gene003594.t1	MTR_8g461210	47.458	59	30	1	19	77	34	91	5.99e-12	57.0
MS.gene003594.t1	MTR_4g021810	49.254	67	32	2	12	77	18	83	1.76e-11	55.5
MS.gene003594.t1	MTR_8g101530	36.364	77	48	1	8	84	28	103	2.58e-11	55.8
MS.gene003594.t1	MTR_7g405740	36.842	76	47	1	5	80	52	126	5.44e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003594.t1	AT4G38840	70.588	68	19	1	19	85	32	99	1.62e-32	108
MS.gene003594.t1	AT2G21200	61.842	76	28	1	10	84	11	86	2.73e-30	102
MS.gene003594.t1	AT5G18020	62.162	74	27	1	13	85	17	90	3.36e-30	102
MS.gene003594.t1	AT4G38825	62.500	72	26	1	15	85	18	89	5.86e-30	102
MS.gene003594.t1	AT5G18080	58.228	79	31	2	8	85	13	90	7.76e-30	101
MS.gene003594.t1	AT5G18030	59.494	79	28	2	8	85	13	88	1.10e-29	101
MS.gene003594.t1	AT5G18050	56.962	79	32	2	8	85	13	90	1.47e-29	100
MS.gene003594.t1	AT5G18060	58.228	79	31	2	8	85	13	90	1.53e-29	100
MS.gene003594.t1	AT4G34800	59.524	84	30	2	1	80	1	84	5.24e-29	99.8
MS.gene003594.t1	AT4G38850	58.025	81	27	2	8	85	13	89	7.70e-29	99.4
MS.gene003594.t1	AT2G21210	57.895	76	30	1	12	85	20	95	7.80e-29	99.4
MS.gene003594.t1	AT5G18010	56.962	79	32	2	8	85	13	90	8.37e-29	99.0
MS.gene003594.t1	AT4G34810	67.164	67	18	1	20	82	48	114	1.95e-28	99.0
MS.gene003594.t1	AT2G21210	57.895	76	30	1	12	85	87	162	4.04e-28	99.8
MS.gene003594.t1	AT3G03820	58.442	77	29	1	12	85	19	95	1.27e-27	96.3
MS.gene003594.t1	AT4G13790	50.000	84	40	1	3	84	8	91	5.10e-27	94.7
MS.gene003594.t1	AT3G03840	56.579	76	31	1	12	85	19	94	1.03e-26	94.0
MS.gene003594.t1	AT4G34770	57.143	84	31	2	4	85	22	102	2.68e-26	93.2
MS.gene003594.t1	AT3G03850	64.179	67	22	1	21	85	26	92	4.29e-26	92.4
MS.gene003594.t1	AT3G03830	58.442	77	26	2	12	85	19	92	1.23e-24	88.6
MS.gene003594.t1	AT4G34790	67.164	67	19	2	20	83	39	105	1.30e-24	89.0
MS.gene003594.t1	AT4G38860	48.352	91	37	1	5	85	15	105	1.94e-23	85.9
MS.gene003594.t1	AT4G34780	58.571	70	26	1	18	84	26	95	5.65e-22	82.4
MS.gene003594.t1	AT2G21220	48.864	88	34	2	5	82	15	101	2.50e-21	80.5
MS.gene003594.t1	AT1G75580	46.429	84	44	1	1	84	25	107	1.66e-20	78.6
MS.gene003594.t1	AT4G34760	56.923	65	27	1	18	82	41	104	3.26e-20	77.8
MS.gene003594.t1	AT4G36110	57.812	64	26	1	19	82	39	101	9.47e-20	76.6
MS.gene003594.t1	AT2G16580	55.385	65	28	1	18	82	42	105	1.74e-19	76.3
MS.gene003594.t1	AT2G18010	53.125	64	29	1	19	82	47	109	8.15e-18	72.0
MS.gene003594.t1	AT1G19830	55.556	63	27	1	15	77	43	104	1.85e-17	71.2
MS.gene003594.t1	AT3G43120	54.237	59	26	1	19	77	78	135	2.19e-17	72.0
MS.gene003594.t1	AT5G20810	55.932	59	25	1	19	77	78	135	1.39e-16	70.1
MS.gene003594.t1	AT5G20810	55.932	59	25	1	19	77	78	135	1.95e-16	70.5
MS.gene003594.t1	AT5G66260	43.478	92	43	3	2	85	8	98	4.46e-15	64.7
MS.gene003594.t1	AT3G51200	46.154	78	36	3	8	80	23	99	5.47e-15	64.7
MS.gene003594.t1	AT3G61900	42.169	83	44	2	6	85	16	97	7.01e-15	65.1
MS.gene003594.t1	AT2G37030	50.794	63	30	1	19	81	48	109	1.39e-14	63.9
MS.gene003594.t1	AT3G20220	50.000	62	29	2	20	80	47	107	1.91e-14	63.5
MS.gene003594.t1	AT4G34750	46.875	64	33	1	19	82	36	98	2.22e-14	63.9
MS.gene003594.t1	AT4G34750	46.875	64	33	1	19	82	36	98	2.22e-14	63.9
MS.gene003594.t1	AT1G75590	44.048	84	36	3	4	77	16	98	5.80e-14	63.2
MS.gene003594.t1	AT5G10990	47.887	71	33	2	7	77	31	97	7.11e-14	62.8
MS.gene003594.t1	AT4G31320	49.296	71	35	1	10	80	70	139	7.50e-14	63.5
MS.gene003594.t1	AT2G46690	43.056	72	37	2	9	77	13	83	1.74e-13	61.2
MS.gene003594.t1	AT2G24400	49.296	71	35	1	10	80	54	123	1.99e-13	62.4
MS.gene003594.t1	AT1G19840	48.571	70	33	2	10	77	29	97	2.22e-13	61.6
MS.gene003594.t1	AT2G45210	50.820	61	26	2	15	72	74	133	2.65e-13	61.6
MS.gene003594.t1	AT3G53250	44.444	63	31	1	19	81	51	109	1.26e-12	58.9
MS.gene003594.t1	AT3G53250	44.444	63	31	1	19	81	82	140	2.55e-12	58.9
MS.gene003594.t1	AT4G00880	44.156	77	38	3	3	77	13	86	5.57e-12	57.4
MS.gene003594.t1	AT4G22620	41.333	75	40	2	6	77	65	138	1.10e-11	57.4

Find 20 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTCGCTCAACAATTCT+TGG	0.215241	4.1:-30787721	None:intergenic
ACAATTCTTGGAATGAAGTT+TGG	0.300739	4.1:-30787709	None:intergenic
GTTTGGTTCAAATATGATAT+AGG	0.366300	4.1:-30787692	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.477829	4.1:-30787638	None:intergenic
TTCTGATGATACTAGGCAAA+CGG	0.500843	4.1:-30787586	None:intergenic
GATGCCCTTCTGATGATACT+AGG	0.525884	4.1:-30787593	None:intergenic
ATTTGAATTCGAGCATCCAA+TGG	0.533591	4.1:+30787751	MS.gene003594:CDS
TTTGAATTCGAGCATCCAAT+GGG	0.538697	4.1:+30787752	MS.gene003594:CDS
AAAAGCTGTGGACGTTCCAA+AGG	0.541170	4.1:+30787622	MS.gene003594:CDS
AACATCTTCTCTGCAAGGAA+TGG	0.541897	4.1:-30787783	None:intergenic
GGCATCATCTTCAAAAGCTG+TGG	0.574105	4.1:+30787610	MS.gene003594:CDS
GTTTGCCTAGTATCATCAGA+AGG	0.575146	4.1:+30787588	MS.gene003594:CDS
AAGAAAACATCTTCTCTGCA+AGG	0.587573	4.1:-30787788	None:intergenic
AAAGCTGTGGACGTTCCAAA+GGG	0.607015	4.1:+30787623	MS.gene003594:CDS
AGAATTGTTGAGCGAAGCTG+AGG	0.620230	4.1:+30787724	MS.gene003594:CDS
GGAATGGTAAGACCACCCAT+TGG	0.623464	4.1:-30787767	None:intergenic
GAATTCGAGCATCCAATGGG+TGG	0.626831	4.1:+30787755	MS.gene003594:CDS
TTTGCCTAGTATCATCAGAA+GGG	0.649454	4.1:+30787589	MS.gene003594:CDS
GGATATCTAGCAGTGTACGT+AGG	0.713792	4.1:+30787644	MS.gene003594:CDS
ACGTAGGAGAGAAAATGAAG+CGG	0.744637	4.1:+30787660	MS.gene003594:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTTGGTTCAAATATGATAT+AGG	-	chr4.1:30787695-30787714	None:intergenic	25.0%
	ACAATTCTTGGAATGAAGTT+TGG	-	chr4.1:30787712-30787731	None:intergenic	30.0%
	AAGAAAACATCTTCTCTGCA+AGG	-	chr4.1:30787791-30787810	None:intergenic	35.0%
	ATTTGAATTCGAGCATCCAA+TGG	+	chr4.1:30787751-30787770	MS.gene003594:CDS	35.0%
	TTCTGATGATACTAGGCAAA+CGG	-	chr4.1:30787589-30787608	None:intergenic	35.0%
	TTTGAATTCGAGCATCCAAT+GGG	+	chr4.1:30787752-30787771	MS.gene003594:CDS	35.0%
	TTTGCCTAGTATCATCAGAA+GGG	+	chr4.1:30787589-30787608	MS.gene003594:CDS	35.0%
	AACATCTTCTCTGCAAGGAA+TGG	-	chr4.1:30787786-30787805	None:intergenic	40.0%
	ACGTAGGAGAGAAAATGAAG+CGG	+	chr4.1:30787660-30787679	MS.gene003594:CDS	40.0%
	GTTTGCCTAGTATCATCAGA+AGG	+	chr4.1:30787588-30787607	MS.gene003594:CDS	40.0%
	TACACTGCTAGATATCCCTT+TGG	-	chr4.1:30787641-30787660	None:intergenic	40.0%
	AAAAGCTGTGGACGTTCCAA+AGG	+	chr4.1:30787622-30787641	MS.gene003594:CDS	45.0%
	AAAGCTGTGGACGTTCCAAA+GGG	+	chr4.1:30787623-30787642	MS.gene003594:CDS	45.0%
	AGAATTGTTGAGCGAAGCTG+AGG	+	chr4.1:30787724-30787743	MS.gene003594:CDS	45.0%
	CAGCTTCGCTCAACAATTCT+TGG	-	chr4.1:30787724-30787743	None:intergenic	45.0%
	GATGCCCTTCTGATGATACT+AGG	-	chr4.1:30787596-30787615	None:intergenic	45.0%
	GGATATCTAGCAGTGTACGT+AGG	+	chr4.1:30787644-30787663	MS.gene003594:CDS	45.0%
	GGCATCATCTTCAAAAGCTG+TGG	+	chr4.1:30787610-30787629	MS.gene003594:CDS	45.0%
	GAATTCGAGCATCCAATGGG+TGG	+	chr4.1:30787755-30787774	MS.gene003594:CDS	50.0%
	GGAATGGTAAGACCACCCAT+TGG	-	chr4.1:30787770-30787789	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30787578	30787835	30787578	ID=MS.gene003594
chr4.1	mRNA	30787578	30787835	30787578	ID=MS.gene003594.t1;Parent=MS.gene003594
chr4.1	exon	30787578	30787835	30787578	ID=MS.gene003594.t1.exon1;Parent=MS.gene003594.t1
chr4.1	CDS	30787578	30787835	30787578	ID=cds.MS.gene003594.t1;Parent=MS.gene003594.t1

Gene Sequence	>MS.gene003594 ATGGGTTTCCGTTTGCCTAGTATCATCAGAAGGGCATCATCTTCAAAAGCTGTGGACGTTCCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATTCCTATATCATATTTGAACCAAACTTCATTCCAAGAATTGTTGAGCGAAGCTGAGGAACAATTTGAATTCGAGCATCCAATGGGTGGTCTTACCATTCCTTGCAGAGAAGATGTTTTCTTAGATATCACTTCTCACTTGAATTGA
Protein sequence	>MS.gene003594.t1 MGFRLPSIIRRASSSKAVDVPKGYLAVYVGEKMKRFVIPISYLNQTSFQELLSEAEEQFEFEHPMGGLTIPCREDVFLDITSHLN