AlfalfaGEDB | MS.gene50684

M. sativa cultivar XinJiangDaYe / MS.gene50684

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50684.t1	XP_003607106.1	91.2	91	8	0	1	91	1	91	2.30E-40	174.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50684.t1	P33079	72.5	91	25	0	1	91	1	91	1.0e-33	143.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50684.t1	G7JL28	91.2	91	8	0	1	91	1	91	1.6e-40	174.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50674	MS.gene50684	PPI
MS.gene057817	MS.gene50684	PPI
MS.gene23367	MS.gene50684	PPI
MS.gene003612	MS.gene50684	PPI
MS.gene057806	MS.gene50684	PPI
MS.gene70683	MS.gene50684	PPI
MS.gene057809	MS.gene50684	PPI
MS.gene062966	MS.gene50684	PPI
MS.gene003613	MS.gene50684	PPI
MS.gene057784	MS.gene50684	PPI
MS.gene062978	MS.gene50684	PPI
MS.gene50684	MS.gene50656	PPI
MS.gene057779	MS.gene50684	PPI
MS.gene50684	MS.gene50686	PPI
MS.gene50669	MS.gene50684	PPI
MS.gene50668	MS.gene50684	PPI
MS.gene022358	MS.gene50684	PPI
MS.gene50684	MS.gene062985	PPI
MS.gene003593	MS.gene50684	PPI
MS.gene003579	MS.gene50684	PPI
MS.gene057785	MS.gene50684	PPI
MS.gene003610	MS.gene50684	PPI
MS.gene50684	MS.gene003622	PPI
MS.gene003628	MS.gene50684	PPI
MS.gene003599	MS.gene50684	PPI
MS.gene003580	MS.gene50684	PPI
MS.gene003585	MS.gene50684	PPI
MS.gene057800	MS.gene50684	PPI
MS.gene057796	MS.gene50684	PPI
MS.gene50684	MS.gene057794	PPI
MS.gene057777	MS.gene50684	PPI
MS.gene057816	MS.gene50684	PPI
MS.gene50772	MS.gene50684	PPI
MS.gene062983	MS.gene50684	PPI
MS.gene057799	MS.gene50684	PPI
MS.gene062965	MS.gene50684	PPI
MS.gene062945	MS.gene50684	PPI
MS.gene057802	MS.gene50684	PPI
MS.gene50684	MS.gene003595	PPI
MS.gene057783	MS.gene50684	PPI
MS.gene50688	MS.gene50684	PPI
MS.gene50773	MS.gene50684	PPI
MS.gene50684	MS.gene50670	PPI
MS.gene50651	MS.gene50684	PPI
MS.gene062962	MS.gene50684	PPI
MS.gene50662	MS.gene50684	PPI
MS.gene50683	MS.gene50684	PPI
MS.gene77525	MS.gene50684	PPI
MS.gene057807	MS.gene50684	PPI
MS.gene003607	MS.gene50684	PPI
MS.gene50666	MS.gene50684	PPI
MS.gene003623	MS.gene50684	PPI
MS.gene23369	MS.gene50684	PPI
MS.gene23368	MS.gene50684	PPI
MS.gene003581	MS.gene50684	PPI
MS.gene50655	MS.gene50684	PPI
MS.gene062941	MS.gene50684	PPI
MS.gene50653	MS.gene50684	PPI
MS.gene003603	MS.gene50684	PPI
MS.gene50684	MS.gene70684	PPI
MS.gene062946	MS.gene50684	PPI
MS.gene057805	MS.gene50684	PPI
MS.gene062959	MS.gene50684	PPI
MS.gene062944	MS.gene50684	PPI
MS.gene057798	MS.gene50684	PPI
MS.gene062971	MS.gene50684	PPI
MS.gene50660	MS.gene50684	PPI
MS.gene057780	MS.gene50684	PPI
MS.gene057788	MS.gene50684	PPI
MS.gene062986	MS.gene50684	PPI
MS.gene057811	MS.gene50684	PPI
MS.gene062954	MS.gene50684	PPI
MS.gene062987	MS.gene50684	PPI
MS.gene50657	MS.gene50684	PPI
MS.gene50684	MS.gene50682	PPI
MS.gene50685	MS.gene50684	PPI
MS.gene062975	MS.gene50684	PPI
MS.gene50664	MS.gene50684	PPI
MS.gene50689	MS.gene50684	PPI
MS.gene003576	MS.gene50684	PPI
MS.gene062969	MS.gene50684	PPI
MS.gene057782	MS.gene50684	PPI
MS.gene003606	MS.gene50684	PPI
MS.gene50684	MS.gene28863	PPI
MS.gene062940	MS.gene50684	PPI
MS.gene50658	MS.gene50684	PPI
MS.gene003626	MS.gene50684	PPI
MS.gene003598	MS.gene50684	PPI
MS.gene057791	MS.gene50684	PPI
MS.gene50673	MS.gene50684	PPI
MS.gene062970	MS.gene50684	PPI
MS.gene062967	MS.gene50684	PPI
MS.gene062942	MS.gene50684	PPI
MS.gene062964	MS.gene50684	PPI
MS.gene003605	MS.gene50684	PPI
MS.gene003629	MS.gene50684	PPI
MS.gene003630	MS.gene50684	PPI
MS.gene50690	MS.gene50684	PPI
MS.gene003597	MS.gene50684	PPI
MS.gene057804	MS.gene50684	PPI
MS.gene23373	MS.gene50684	PPI
MS.gene062989	MS.gene50684	PPI
MS.gene062980	MS.gene50684	PPI
MS.gene062972	MS.gene50684	PPI
MS.gene50771	MS.gene50684	PPI
MS.gene50684	MS.gene062953	PPI
MS.gene062958	MS.gene50684	PPI
MS.gene70685	MS.gene50684	PPI
MS.gene003582	MS.gene50684	PPI
MS.gene003584	MS.gene50684	PPI
MS.gene50770	MS.gene50684	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50684.t1	MTR_4g072300	91.209	91	8	0	1	91	1	91	4.62e-59	176
MS.gene50684.t1	MTR_4g072240	90.110	91	9	0	1	91	1	91	5.34e-58	173
MS.gene50684.t1	MTR_4g072220	87.912	91	11	0	1	91	1	91	4.20e-56	168
MS.gene50684.t1	MTR_4g072260	85.714	91	13	0	1	91	1	91	1.19e-55	167
MS.gene50684.t1	MTR_4g072890	85.714	91	13	0	1	91	1	91	2.08e-55	166
MS.gene50684.t1	MTR_4g072870	84.615	91	14	0	1	91	1	91	1.82e-54	164
MS.gene50684.t1	MTR_3g084150	72.527	91	24	1	1	91	1	90	3.71e-45	140
MS.gene50684.t1	MTR_4g072310	68.132	91	29	0	1	91	1	91	6.69e-45	140
MS.gene50684.t1	MTR_4g072330	72.527	91	22	1	1	91	1	88	6.97e-45	140
MS.gene50684.t1	MTR_4g072570	71.429	91	25	1	1	91	1	90	7.91e-45	139
MS.gene50684.t1	MTR_4g072500	70.330	91	26	1	1	91	1	90	1.43e-44	139
MS.gene50684.t1	MTR_3g110038	73.626	91	23	1	1	91	1	90	2.34e-44	138
MS.gene50684.t1	MTR_3g084180	71.429	91	25	1	1	91	1	90	2.37e-44	138
MS.gene50684.t1	MTR_4g072370	70.330	91	24	1	1	91	1	88	4.65e-44	137
MS.gene50684.t1	MTR_3g084240	71.429	91	25	1	1	91	1	90	4.68e-44	137
MS.gene50684.t1	MTR_4g072640	70.330	91	26	1	1	91	1	90	7.92e-44	137
MS.gene50684.t1	MTR_4g072280	85.333	75	11	0	1	75	1	75	8.91e-44	136
MS.gene50684.t1	MTR_8g461410	70.330	91	26	1	1	91	1	90	1.03e-43	137
MS.gene50684.t1	MTR_3g084170	71.429	91	25	1	1	91	1	90	2.30e-43	136
MS.gene50684.t1	MTR_4g072530	68.132	91	28	1	1	91	1	90	5.44e-43	135
MS.gene50684.t1	MTR_4g072230	68.132	91	27	1	1	91	1	89	5.92e-43	135
MS.gene50684.t1	MTR_4g072250	69.231	91	27	1	1	91	1	90	1.07e-42	134
MS.gene50684.t1	MTR_4g072880	67.033	91	30	0	1	91	1	91	1.17e-42	134
MS.gene50684.t1	MTR_4g072740	70.330	91	21	1	1	91	1	85	1.64e-42	134
MS.gene50684.t1	MTR_3g084250	70.330	91	26	1	1	91	1	90	2.20e-42	133
MS.gene50684.t1	MTR_4g072830	71.111	90	23	1	1	90	1	87	2.53e-42	133
MS.gene50684.t1	MTR_3g110032	67.033	91	30	0	1	91	1	91	6.64e-42	132
MS.gene50684.t1	MTR_4g050700	68.132	91	29	0	1	91	1	91	1.15e-41	132
MS.gene50684.t1	MTR_2g012410	68.132	91	29	0	1	91	1	91	1.15e-41	132
MS.gene50684.t1	MTR_4g072630	69.231	91	23	1	1	91	1	86	2.13e-41	130
MS.gene50684.t1	MTR_4g072730	65.934	91	30	1	1	91	1	90	3.98e-41	130
MS.gene50684.t1	MTR_4g072580	68.132	91	23	1	1	91	1	85	4.47e-41	130
MS.gene50684.t1	MTR_4g072600	69.231	91	22	1	1	91	1	85	4.88e-41	130
MS.gene50684.t1	MTR_3g117630	67.045	88	29	0	4	91	3	90	6.04e-41	130
MS.gene50684.t1	MTR_3g084220	68.132	91	28	1	1	91	1	90	8.49e-41	129
MS.gene50684.t1	MTR_4g072860	65.934	91	31	0	1	91	1	91	9.86e-41	129
MS.gene50684.t1	MTR_4g072480	65.934	91	30	1	1	91	1	90	1.60e-40	129
MS.gene50684.t1	MTR_3g110042	68.889	90	27	1	1	90	1	89	4.03e-40	128
MS.gene50684.t1	MTR_4g072270	63.736	91	33	0	1	91	1	91	8.10e-40	127
MS.gene50684.t1	MTR_4g072680	63.736	91	32	1	1	91	1	90	1.98e-39	126
MS.gene50684.t1	MTR_4g072620	62.637	91	33	1	1	91	1	90	3.46e-39	125
MS.gene50684.t1	MTR_3g084260	64.835	91	32	0	1	91	1	91	7.76e-39	124
MS.gene50684.t1	MTR_4g072490	65.934	91	25	1	1	91	1	85	7.99e-39	124
MS.gene50684.t1	MTR_4g072820	65.934	91	25	1	1	91	1	85	2.04e-38	123
MS.gene50684.t1	MTR_4g072660	63.736	91	27	1	1	91	1	85	2.10e-38	123
MS.gene50684.t1	MTR_4g072470	64.835	91	26	1	1	91	1	85	2.45e-38	123
MS.gene50684.t1	MTR_4g072460	62.637	91	33	1	1	91	1	90	3.13e-38	123
MS.gene50684.t1	MTR_4g072850	67.391	92	29	1	1	91	1	92	4.62e-38	122
MS.gene50684.t1	MTR_4g072610	63.736	91	26	1	1	91	1	84	1.83e-37	121
MS.gene50684.t1	MTR_4g072540	67.033	91	25	1	1	91	1	86	2.38e-37	120
MS.gene50684.t1	MTR_3g084190	71.429	91	25	1	1	91	1	90	3.24e-37	120
MS.gene50684.t1	MTR_3g084210	69.231	91	27	1	1	91	1	90	4.55e-37	120
MS.gene50684.t1	MTR_8g461420	70.330	91	26	1	1	91	1	90	7.06e-37	119
MS.gene50684.t1	MTR_3g084160	70.330	91	26	1	1	91	1	90	7.79e-37	119
MS.gene50684.t1	MTR_4g072465	62.637	91	29	1	1	91	1	86	8.70e-37	119
MS.gene50684.t1	MTR_4g072650	63.736	91	26	1	1	91	1	84	1.77e-36	118
MS.gene50684.t1	MTR_3g084230	70.330	91	26	1	1	91	1	90	1.79e-36	119
MS.gene50684.t1	MTR_4g072670	64.835	91	27	1	1	91	1	86	4.22e-36	117
MS.gene50684.t1	MTR_4g072510	65.934	91	26	1	1	91	1	86	4.98e-36	117
MS.gene50684.t1	MTR_4g072940	75.714	70	17	0	22	91	53	122	7.77e-36	118
MS.gene50684.t1	MTR_4g072720	64.835	91	27	1	1	91	1	86	1.24e-35	116
MS.gene50684.t1	MTR_3g110045	72.289	83	23	0	9	91	67	149	2.58e-35	117
MS.gene50684.t1	MTR_4g072590	68.293	82	26	0	10	91	4	85	5.00e-35	114
MS.gene50684.t1	MTR_5g008360	64.198	81	29	0	11	91	1	81	1.27e-34	114
MS.gene50684.t1	MTR_4g072690	64.835	91	26	1	1	91	1	85	1.24e-33	111
MS.gene50684.t1	MTR_4g072380	63.043	92	27	2	1	91	1	86	1.33e-33	111
MS.gene50684.t1	MTR_4g072910	63.529	85	30	1	7	91	17	100	1.79e-33	111
MS.gene50684.t1	MTR_4g072450	63.736	91	27	1	1	91	1	85	2.10e-33	110
MS.gene50684.t1	MTR_5g008370	69.863	73	22	0	19	91	18	90	7.98e-33	111
MS.gene50684.t1	MTR_4g072550	60.920	87	33	1	6	91	15	101	1.64e-32	108
MS.gene50684.t1	MTR_3g084200	69.863	73	21	1	1	73	1	72	3.83e-32	108
MS.gene50684.t1	MTR_5g008350	63.750	80	23	1	1	80	1	74	7.61e-32	106
MS.gene50684.t1	MTR_4g072770	68.182	66	21	0	26	91	15	80	1.22e-30	103
MS.gene50684.t1	MTR_4g072980	62.338	77	25	2	15	90	19	92	8.33e-30	102
MS.gene50684.t1	MTR_3g117640	65.672	67	22	1	26	91	34	100	2.10e-29	101
MS.gene50684.t1	MTR_4g072560	63.636	66	23	1	26	90	32	97	5.32e-29	100
MS.gene50684.t1	MTR_4g072930	48.039	102	42	2	1	91	9	110	2.37e-28	99.0
MS.gene50684.t1	MTR_4g072750	66.667	75	22	2	1	73	1	74	5.19e-28	97.1
MS.gene50684.t1	MTR_4g072290	52.747	91	29	1	1	91	1	77	5.97e-28	97.1
MS.gene50684.t1	MTR_3g110035	65.625	64	22	0	28	91	73	136	3.41e-25	91.7
MS.gene50684.t1	MTR_6g077850	52.239	67	32	0	25	91	33	99	1.89e-23	86.3
MS.gene50684.t1	MTR_3g113310	55.224	67	29	1	24	90	40	105	4.06e-23	85.5
MS.gene50684.t1	MTR_3g117610	58.462	65	26	1	24	88	43	106	1.38e-22	84.3
MS.gene50684.t1	MTR_4g072190	51.316	76	36	1	15	90	25	99	5.85e-22	82.4
MS.gene50684.t1	MTR_2g043960	53.086	81	36	2	4	83	53	132	3.37e-21	82.0
MS.gene50684.t1	MTR_4g124750	50.000	86	38	2	7	88	46	130	5.57e-21	81.3
MS.gene50684.t1	MTR_8g461400	48.352	91	20	2	1	91	1	64	1.43e-20	77.8
MS.gene50684.t1	MTR_5g021820	47.619	84	40	3	10	90	21	103	9.32e-20	77.0
MS.gene50684.t1	MTR_8g076040	54.688	64	28	1	25	88	40	102	2.50e-19	75.9
MS.gene50684.t1	MTR_4g072160	45.783	83	44	1	4	86	15	96	1.82e-18	74.7
MS.gene50684.t1	MTR_3g092220	44.156	77	40	2	9	83	16	91	2.00e-18	73.6
MS.gene50684.t1	MTR_4g025830	50.704	71	31	2	23	90	76	145	3.36e-18	74.3
MS.gene50684.t1	MTR_4g005310	55.000	60	26	1	25	83	61	120	9.11e-18	73.2
MS.gene50684.t1	MTR_1g009150	52.239	67	31	1	17	83	62	127	2.42e-17	72.8
MS.gene50684.t1	MTR_0388s0020	42.529	87	45	3	7	90	57	141	2.51e-17	72.0
MS.gene50684.t1	MTR_4g072840	46.739	92	16	3	1	91	1	60	4.39e-17	68.9
MS.gene50684.t1	MTR_7g118010	48.529	68	32	2	26	91	23	89	4.76e-17	70.1
MS.gene50684.t1	MTR_1g094750	45.679	81	40	2	9	86	30	109	6.05e-17	70.1
MS.gene50684.t1	MTR_1g024085	46.250	80	31	2	4	83	26	93	2.43e-16	69.3
MS.gene50684.t1	MTR_3g097120	45.570	79	34	2	21	91	4	81	5.76e-16	67.4
MS.gene50684.t1	MTR_1g061570	54.237	59	26	1	25	83	18	75	7.01e-16	67.4
MS.gene50684.t1	MTR_8g026730	51.667	60	26	2	26	83	27	85	9.65e-16	66.6
MS.gene50684.t1	MTR_7g101740	48.438	64	32	1	25	88	39	101	1.65e-15	66.2
MS.gene50684.t1	MTR_3g109160	48.684	76	38	1	8	83	51	125	1.68e-15	67.8
MS.gene50684.t1	MTR_1g063950	45.161	62	33	1	25	86	47	107	2.56e-15	66.2
MS.gene50684.t1	MTR_4g005320	51.724	58	27	1	26	83	70	126	1.37e-14	65.1
MS.gene50684.t1	MTR_8g461210	49.153	59	29	1	25	83	34	91	1.42e-14	63.9
MS.gene50684.t1	MTR_7g405740	49.180	61	30	1	26	86	67	126	2.11e-14	64.7
MS.gene50684.t1	MTR_1g059770	39.474	76	38	2	22	90	38	112	5.09e-14	62.8
MS.gene50684.t1	MTR_8g094980	43.038	79	31	2	25	90	2	79	1.96e-13	60.8
MS.gene50684.t1	MTR_2g066830	40.541	74	33	2	5	78	47	109	1.96e-13	61.6
MS.gene50684.t1	MTR_8g101520	44.615	65	35	1	27	91	51	114	2.79e-13	61.6
MS.gene50684.t1	MTR_3g098970	35.526	76	48	1	16	91	43	117	7.65e-13	60.5
MS.gene50684.t1	MTR_7g104950	40.323	62	36	1	29	90	53	113	9.63e-13	59.7
MS.gene50684.t1	MTR_8g096440	38.158	76	46	1	10	85	29	103	1.29e-12	59.7
MS.gene50684.t1	MTR_8g096470	43.333	60	33	1	27	86	47	105	1.59e-12	58.5
MS.gene50684.t1	MTR_4g021810	47.059	68	33	3	17	83	18	83	1.88e-12	58.2
MS.gene50684.t1	MTR_7g104940	38.710	62	37	1	29	90	53	113	8.36e-12	57.4
MS.gene50684.t1	MTR_3g105900	66.667	36	12	0	25	60	1171	1206	9.52e-12	59.7
MS.gene50684.t1	MTR_8g096500	45.763	59	31	1	27	85	50	107	1.32e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50684.t1	AT4G38840	73.529	68	17	1	25	91	32	99	1.69e-33	111
MS.gene50684.t1	AT2G21210	53.684	95	40	2	1	91	1	95	6.45e-33	110
MS.gene50684.t1	AT2G21210	53.684	95	40	2	1	91	68	162	4.06e-32	110
MS.gene50684.t1	AT5G18080	62.667	75	27	1	17	90	15	89	6.10e-32	107
MS.gene50684.t1	AT5G18020	59.036	83	29	2	10	91	12	90	5.32e-31	105
MS.gene50684.t1	AT5G18060	68.182	66	20	1	27	91	25	90	7.26e-31	104
MS.gene50684.t1	AT3G03820	56.989	93	34	2	2	91	6	95	1.21e-30	104
MS.gene50684.t1	AT4G38825	61.333	75	28	1	18	91	15	89	1.30e-30	103
MS.gene50684.t1	AT5G18050	66.667	66	21	1	26	90	24	89	2.37e-30	103
MS.gene50684.t1	AT4G34770	62.500	80	28	1	14	91	23	102	3.20e-30	103
MS.gene50684.t1	AT2G21200	63.889	72	25	1	20	90	15	86	3.46e-30	102
MS.gene50684.t1	AT5G18010	57.895	76	31	1	17	91	15	90	6.15e-30	102
MS.gene50684.t1	AT5G18030	62.500	72	26	1	21	91	17	88	6.34e-30	102
MS.gene50684.t1	AT4G34800	52.809	89	34	2	1	86	1	84	2.48e-29	100
MS.gene50684.t1	AT3G03840	62.500	72	25	1	22	91	23	94	4.27e-29	100
MS.gene50684.t1	AT3G03850	65.672	67	21	1	27	91	26	92	2.00e-28	98.6
MS.gene50684.t1	AT4G38850	60.870	69	24	1	26	91	21	89	2.53e-28	98.2
MS.gene50684.t1	AT4G34790	64.615	65	21	1	26	88	39	103	4.90e-27	95.5
MS.gene50684.t1	AT4G34810	60.563	71	23	2	25	90	47	117	8.23e-27	95.1
MS.gene50684.t1	AT3G03830	58.571	70	26	1	25	91	23	92	1.22e-25	91.3
MS.gene50684.t1	AT4G34780	62.319	69	23	2	26	91	28	96	2.06e-25	91.3
MS.gene50684.t1	AT4G13790	50.685	73	34	1	20	90	19	91	4.36e-25	90.1
MS.gene50684.t1	AT4G38860	54.412	68	31	0	24	91	38	105	9.92e-23	84.3
MS.gene50684.t1	AT1G75580	48.889	90	38	2	8	90	19	107	1.35e-21	81.6
MS.gene50684.t1	AT3G43120	53.623	69	31	1	15	83	68	135	2.38e-21	82.4
MS.gene50684.t1	AT5G20810	55.882	68	29	1	16	83	69	135	1.01e-20	80.9
MS.gene50684.t1	AT4G34760	53.731	67	30	1	24	90	41	106	1.14e-20	79.3
MS.gene50684.t1	AT2G21220	53.030	66	30	1	25	90	39	103	1.23e-20	79.0
MS.gene50684.t1	AT5G20810	55.882	68	29	1	16	83	69	135	1.71e-20	80.9
MS.gene50684.t1	AT1G19830	53.731	67	30	1	24	90	46	111	2.25e-19	76.3
MS.gene50684.t1	AT5G66260	54.545	66	29	1	26	91	34	98	9.97e-19	74.3
MS.gene50684.t1	AT4G36110	53.125	64	29	1	25	88	39	101	2.90e-18	73.2
MS.gene50684.t1	AT2G16580	53.846	65	29	1	24	88	42	105	6.37e-18	72.4
MS.gene50684.t1	AT3G20220	52.308	65	29	2	26	89	47	110	1.03e-17	72.0
MS.gene50684.t1	AT2G18010	53.125	64	29	1	25	88	47	109	1.14e-17	71.6
MS.gene50684.t1	AT3G51200	48.148	81	40	2	7	86	20	99	3.17e-17	70.5
MS.gene50684.t1	AT2G37030	49.206	63	31	1	25	87	48	109	6.47e-17	70.1
MS.gene50684.t1	AT1G75590	54.237	59	26	1	25	83	41	98	1.69e-16	70.1
MS.gene50684.t1	AT2G45210	45.588	68	33	2	26	90	79	145	4.53e-16	68.9
MS.gene50684.t1	AT5G10990	52.542	59	27	1	25	83	40	97	4.66e-16	68.6
MS.gene50684.t1	AT3G60690	46.377	69	33	2	26	91	88	155	5.15e-16	68.9
MS.gene50684.t1	AT1G19840	54.237	59	26	1	25	83	40	97	7.72e-16	68.2
MS.gene50684.t1	AT4G12410	50.000	68	30	2	26	90	76	142	8.04e-16	68.2
MS.gene50684.t1	AT3G61900	38.947	95	52	3	2	91	4	97	1.16e-15	67.4
MS.gene50684.t1	AT3G53250	46.032	63	30	1	25	87	51	109	2.16e-15	66.2
MS.gene50684.t1	AT2G46690	47.826	69	32	2	18	83	16	83	2.98e-15	65.9
MS.gene50684.t1	AT3G53250	46.032	63	30	1	25	87	82	140	3.36e-15	66.6
MS.gene50684.t1	AT4G00880	55.738	61	24	2	25	83	27	86	5.36e-15	65.1
MS.gene50684.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.35e-14	65.1
MS.gene50684.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.35e-14	65.1
MS.gene50684.t1	AT4G22620	45.588	68	33	2	26	90	79	145	4.90e-14	63.5
MS.gene50684.t1	AT4G31320	46.053	76	34	2	8	83	68	136	8.22e-14	63.5
MS.gene50684.t1	AT3G12830	42.857	77	39	2	15	91	43	114	9.96e-14	62.4
MS.gene50684.t1	AT5G53590	40.278	72	37	2	25	91	45	115	1.47e-13	62.0
MS.gene50684.t1	AT2G24400	46.053	76	34	2	8	83	52	120	8.72e-13	60.8
MS.gene50684.t1	AT4G09530	41.096	73	40	2	17	86	19	91	1.17e-12	58.9
MS.gene50684.t1	AT1G56150	42.424	66	37	1	26	91	38	102	1.56e-12	58.5
MS.gene50684.t1	AT3G03847	54.717	53	22	2	34	86	80	130	3.95e-12	58.2
MS.gene50684.t1	AT1G16510	41.538	65	37	1	26	90	54	117	4.70e-12	58.2
MS.gene50684.t1	AT5G03310	44.118	68	31	3	25	86	38	104	5.79e-12	57.4
MS.gene50684.t1	AT2G36210	38.235	68	42	0	16	83	44	111	9.46e-11	54.7

Find 18 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAGTAATTCTTGAAATAA+TGG	0.257115	4.3:-33550649	None:intergenic
AATCAAGCCGAAGAAGAATT+TGG	0.279106	4.3:+33550670	MS.gene50684:CDS
ATCATATCCAAATTCTTCTT+CGG	0.372966	4.3:-33550677	None:intergenic
GGTTGATTCAAGTATGATAC+TGG	0.378919	4.3:-33550628	None:intergenic
TAGACTGCAAGATAGCCTTT+TGG	0.442040	4.3:-33550574	None:intergenic
TTTGGATATGATCATCCAAC+GGG	0.514979	4.3:+33550688	MS.gene50684:CDS
GGCTATCTTGCAGTCTACGT+TGG	0.536328	4.3:+33550580	MS.gene50684:CDS
AAGGGATTCGAAGTCCCAAA+AGG	0.563694	4.3:+33550559	MS.gene50684:CDS
CTCAACACAAGCATCTAGCA+AGG	0.576789	4.3:+33550540	MS.gene50684:CDS
AAGAAAGTATCTTCACTGCA+AGG	0.617328	4.3:-33550724	None:intergenic
CTTGCTAGATGCTTGTGTTG+AGG	0.618806	4.3:-33550539	None:intergenic
ATTTGGATATGATCATCCAA+CGG	0.621388	4.3:+33550687	MS.gene50684:CDS
TCTACGTTGGAGATCAAATG+AGG	0.626265	4.3:+33550593	MS.gene50684:CDS
GCTTGTGTTGAGGAAAATGA+TGG	0.641773	4.3:-33550529	None:intergenic
GGAATTGTGAGACCACCCGT+TGG	0.645717	4.3:-33550703	None:intergenic
TCAACACAAGCATCTAGCAA+GGG	0.660224	4.3:+33550541	MS.gene50684:CDS
GGATATGATCATCCAACGGG+TGG	0.666271	4.3:+33550691	MS.gene50684:CDS
ACGTTGGAGATCAAATGAGG+CGG	0.704375	4.3:+33550596	MS.gene50684:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTAGTAATTCTTGAAATAA+TGG	-	chr4.3:33550652-33550671	None:intergenic	15.0%
!	ATCATATCCAAATTCTTCTT+CGG	-	chr4.3:33550680-33550699	None:intergenic	25.0%
	ATTTGGATATGATCATCCAA+CGG	+	chr4.3:33550687-33550706	MS.gene50684:CDS	30.0%
!!	TTCTGATAAGTTTTGCTATG+CGG	-	chr4.3:33550507-33550526	None:intergenic	30.0%
	AATCAAGCCGAAGAAGAATT+TGG	+	chr4.3:33550670-33550689	MS.gene50684:CDS	35.0%
	TTTGGATATGATCATCCAAC+GGG	+	chr4.3:33550688-33550707	MS.gene50684:CDS	35.0%
!	GGTTGATTCAAGTATGATAC+TGG	-	chr4.3:33550631-33550650	None:intergenic	35.0%
!!	AAGAAAGTATCTTCACTGCA+AGG	-	chr4.3:33550727-33550746	None:intergenic	35.0%
	GCTTGTGTTGAGGAAAATGA+TGG	-	chr4.3:33550532-33550551	None:intergenic	40.0%
	TCAACACAAGCATCTAGCAA+GGG	+	chr4.3:33550541-33550560	MS.gene50684:CDS	40.0%
	TCTACGTTGGAGATCAAATG+AGG	+	chr4.3:33550593-33550612	MS.gene50684:CDS	40.0%
!	AGACTGCAAGATAGCCTTTT+GGG	-	chr4.3:33550576-33550595	None:intergenic	40.0%
!	TAGACTGCAAGATAGCCTTT+TGG	-	chr4.3:33550577-33550596	None:intergenic	40.0%
	AAGGGATTCGAAGTCCCAAA+AGG	+	chr4.3:33550559-33550578	MS.gene50684:CDS	45.0%
	ACGTTGGAGATCAAATGAGG+CGG	+	chr4.3:33550596-33550615	MS.gene50684:CDS	45.0%
	CTCAACACAAGCATCTAGCA+AGG	+	chr4.3:33550540-33550559	MS.gene50684:CDS	45.0%
	CTTGCTAGATGCTTGTGTTG+AGG	-	chr4.3:33550542-33550561	None:intergenic	45.0%
	GGATATGATCATCCAACGGG+TGG	+	chr4.3:33550691-33550710	MS.gene50684:CDS	50.0%
	GGCTATCTTGCAGTCTACGT+TGG	+	chr4.3:33550580-33550599	MS.gene50684:CDS	50.0%
	GGAATTGTGAGACCACCCGT+TGG	-	chr4.3:33550706-33550725	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	33550496	33550771	33550496	ID=MS.gene50684
chr4.3	mRNA	33550496	33550771	33550496	ID=MS.gene50684.t1;Parent=MS.gene50684
chr4.3	exon	33550496	33550771	33550496	ID=MS.gene50684.t1.exon1;Parent=MS.gene50684.t1
chr4.3	CDS	33550496	33550771	33550496	ID=cds.MS.gene50684.t1;Parent=MS.gene50684.t1

Gene Sequence	>MS.gene50684 ATGGGTTTCCGCATAGCAAAACTTATCAGAATGCCATCATTTTCCTCAACACAAGCATCTAGCAAGGGATTCGAAGTCCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATCAAATGAGGCGGTTTGTGATTCCAGTATCATACTTGAATCAACCATTATTTCAAGAATTACTAAATCAAGCCGAAGAAGAATTTGGATATGATCATCCAACGGGTGGTCTCACAATTCCTTGCAGTGAAGATACTTTCTTACAACTCACTTCTCGCTTGAATTGA
Protein sequence	>MS.gene50684.t1 MGFRIAKLIRMPSFSSTQASSKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPLFQELLNQAEEEFGYDHPTGGLTIPCSEDTFLQLTSRLN