AlfalfaGEDB | MS.gene77526

M. sativa cultivar XinJiangDaYe / MS.gene77526

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77526.t1	AES71927.1	98.9	92	1	0	1	92	1	92	1.70E-43	184.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77526.t1	P33079	66.7	93	30	1	1	92	1	93	1.9e-30	132.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77526.t1	G7JAR0	98.9	92	1	0	1	92	1	92	1.2e-43	184.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049758	MS.gene77526	0.828114	1.08E-54	-1.69E-46
MS.gene051860	MS.gene77526	0.803519	3.35E-49	-1.69E-46
MS.gene053836	MS.gene77526	0.817025	4.08E-52	-1.69E-46
MS.gene055859	MS.gene77526	0.802556	5.30E-49	-1.69E-46
MS.gene05907	MS.gene77526	0.804176	2.45E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene062969	MS.gene77526	PPI
MS.gene77526	MS.gene062953	PPI
MS.gene057782	MS.gene77526	PPI
MS.gene003606	MS.gene77526	PPI
MS.gene77526	MS.gene003622	PPI
MS.gene003626	MS.gene77526	PPI
MS.gene77526	MS.gene003599	PPI
MS.gene77526	MS.gene23368	PPI
MS.gene50673	MS.gene77526	PPI
MS.gene062970	MS.gene77526	PPI
MS.gene77526	MS.gene057817	PPI
MS.gene77526	MS.gene50668	PPI
MS.gene77526	MS.gene003581	PPI
MS.gene77526	MS.gene70684	PPI
MS.gene062942	MS.gene77526	PPI
MS.gene003605	MS.gene77526	PPI
MS.gene77526	MS.gene062958	PPI
MS.gene77526	MS.gene057798	PPI
MS.gene77526	MS.gene003612	PPI
MS.gene77526	MS.gene062983	PPI
MS.gene77526	MS.gene057777	PPI
MS.gene003597	MS.gene77526	PPI
MS.gene77526	MS.gene062967	PPI
MS.gene77526	MS.gene003579	PPI
MS.gene062972	MS.gene77526	PPI
MS.gene77526	MS.gene062940	PPI
MS.gene77526	MS.gene062989	PPI
MS.gene77526	MS.gene003595	PPI
MS.gene77526	MS.gene062959	PPI
MS.gene77526	MS.gene003607	PPI
MS.gene77526	MS.gene50686	PPI
MS.gene003582	MS.gene77526	PPI
MS.gene77526	MS.gene50664	PPI
MS.gene77526	MS.gene057785	PPI
MS.gene77526	MS.gene70683	PPI
MS.gene77526	MS.gene50670	PPI
MS.gene057800	MS.gene77526	PPI
MS.gene50674	MS.gene77526	PPI
MS.gene77526	MS.gene50669	PPI
MS.gene77526	MS.gene70685	PPI
MS.gene057806	MS.gene77526	PPI
MS.gene77526	MS.gene062941	PPI
MS.gene057809	MS.gene77526	PPI
MS.gene062966	MS.gene77526	PPI
MS.gene77526	MS.gene50660	PPI
MS.gene77526	MS.gene003623	PPI
MS.gene062978	MS.gene77526	PPI
MS.gene77526	MS.gene057799	PPI
MS.gene77526	MS.gene057794	PPI
MS.gene77526	MS.gene50688	PPI
MS.gene77526	MS.gene003629	PPI
MS.gene003593	MS.gene77526	PPI
MS.gene77526	MS.gene062980	PPI
MS.gene77526	MS.gene23367	PPI
MS.gene77526	MS.gene003610	PPI
MS.gene003628	MS.gene77526	PPI
MS.gene003580	MS.gene77526	PPI
MS.gene77526	MS.gene057802	PPI
MS.gene77526	MS.gene50773	PPI
MS.gene77526	MS.gene057796	PPI
MS.gene003585	MS.gene77526	PPI
MS.gene77526	MS.gene50682	PPI
MS.gene77526	MS.gene50653	PPI
MS.gene77526	MS.gene003598	PPI
MS.gene77526	MS.gene50690	PPI
MS.gene057816	MS.gene77526	PPI
MS.gene50772	MS.gene77526	PPI
MS.gene77526	MS.gene057780	PPI
MS.gene77526	MS.gene057788	PPI
MS.gene77526	MS.gene50685	PPI
MS.gene77526	MS.gene003613	PPI
MS.gene057783	MS.gene77526	PPI
MS.gene77526	MS.gene003630	PPI
MS.gene062962	MS.gene77526	PPI
MS.gene77526	MS.gene057779	PPI
MS.gene50662	MS.gene77526	PPI
MS.gene50683	MS.gene77526	PPI
MS.gene77525	MS.gene77526	PPI
MS.gene77526	MS.gene062965	PPI
MS.gene057807	MS.gene77526	PPI
MS.gene77526	MS.gene50771	PPI
MS.gene77526	MS.gene022358	PPI
MS.gene77526	MS.gene23369	PPI
MS.gene77526	MS.gene062986	PPI
MS.gene77526	MS.gene50770	PPI
MS.gene77526	MS.gene062987	PPI
MS.gene77526	MS.gene057811	PPI
MS.gene003603	MS.gene77526	PPI
MS.gene062946	MS.gene77526	PPI
MS.gene057805	MS.gene77526	PPI
MS.gene77526	MS.gene062964	PPI
MS.gene77526	MS.gene062944	PPI
MS.gene77526	MS.gene50658	PPI
MS.gene77526	MS.gene50655	PPI
MS.gene77526	MS.gene28863	PPI
MS.gene77526	MS.gene003584	PPI
MS.gene77526	MS.gene062945	PPI
MS.gene77526	MS.gene057791	PPI
MS.gene062971	MS.gene77526	PPI
MS.gene23373	MS.gene77526	PPI
MS.gene77526	MS.gene057804	PPI
MS.gene062954	MS.gene77526	PPI
MS.gene50657	MS.gene77526	PPI
MS.gene77526	MS.gene50651	PPI
MS.gene062975	MS.gene77526	PPI
MS.gene77526	MS.gene50656	PPI
MS.gene50689	MS.gene77526	PPI
MS.gene77526	MS.gene50666	PPI
MS.gene003576	MS.gene77526	PPI
MS.gene77526	MS.gene062985	PPI
MS.gene77526	MS.gene057784	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77526.t1	MTR_3g084240	98.913	92	1	0	1	92	1	92	4.97e-65	191
MS.gene77526.t1	MTR_3g084170	97.826	92	2	0	1	92	1	92	3.63e-64	188
MS.gene77526.t1	MTR_3g084220	95.652	92	4	0	1	92	1	92	1.79e-62	184
MS.gene77526.t1	MTR_3g110038	92.391	92	7	0	1	92	1	92	1.32e-59	177
MS.gene77526.t1	MTR_4g050700	87.097	93	11	1	1	92	1	93	6.09e-56	167
MS.gene77526.t1	MTR_2g012410	87.097	93	11	1	1	92	1	93	6.09e-56	167
MS.gene77526.t1	MTR_3g084150	87.097	93	10	2	1	92	1	92	1.52e-55	167
MS.gene77526.t1	MTR_8g461410	86.022	93	11	2	1	92	1	92	2.66e-55	166
MS.gene77526.t1	MTR_3g084180	86.022	93	11	2	1	92	1	92	2.26e-54	164
MS.gene77526.t1	MTR_3g110032	83.871	93	14	1	1	92	1	93	2.32e-52	159
MS.gene77526.t1	MTR_3g084260	82.796	93	15	1	1	92	1	93	9.87e-52	157
MS.gene77526.t1	MTR_3g110042	85.227	88	11	2	1	87	1	87	1.62e-49	151
MS.gene77526.t1	MTR_3g117630	80.000	90	17	1	4	92	3	92	1.71e-48	149
MS.gene77526.t1	MTR_4g072310	74.194	93	23	1	1	92	1	93	1.72e-48	149
MS.gene77526.t1	MTR_4g072250	76.344	93	20	2	1	92	1	92	7.59e-48	147
MS.gene77526.t1	MTR_4g072880	73.118	93	24	1	1	92	1	93	2.10e-47	146
MS.gene77526.t1	MTR_4g072870	72.527	91	24	1	1	90	1	91	8.70e-47	144
MS.gene77526.t1	MTR_4g072230	76.344	93	19	2	1	92	1	91	8.99e-47	144
MS.gene77526.t1	MTR_4g072270	73.118	93	24	1	1	92	1	93	1.51e-46	144
MS.gene77526.t1	MTR_4g072370	74.444	90	21	1	1	90	1	88	1.60e-45	141
MS.gene77526.t1	MTR_4g072500	74.194	93	22	2	1	92	1	92	1.89e-45	141
MS.gene77526.t1	MTR_4g072490	72.222	90	20	1	1	90	1	85	4.56e-45	140
MS.gene77526.t1	MTR_4g072480	69.565	92	28	0	1	92	1	92	6.54e-45	140
MS.gene77526.t1	MTR_4g072860	72.043	93	25	1	1	92	1	93	1.06e-44	139
MS.gene77526.t1	MTR_3g084200	91.667	72	6	0	1	72	1	72	1.52e-44	139
MS.gene77526.t1	MTR_4g072240	70.330	91	26	1	1	90	1	91	2.89e-44	138
MS.gene77526.t1	MTR_4g072620	68.478	92	29	0	1	92	1	92	5.62e-44	137
MS.gene77526.t1	MTR_4g072330	72.222	90	23	1	1	90	1	88	7.12e-44	137
MS.gene77526.t1	MTR_4g072740	73.333	90	19	1	1	90	1	85	7.16e-44	137
MS.gene77526.t1	MTR_4g072680	68.478	92	29	0	1	92	1	92	7.31e-44	137
MS.gene77526.t1	MTR_4g072300	70.330	91	26	1	1	90	1	91	9.33e-44	137
MS.gene77526.t1	MTR_4g072260	68.817	93	28	1	1	92	1	93	1.25e-43	137
MS.gene77526.t1	MTR_4g072890	70.330	91	26	1	1	90	1	91	1.50e-43	136
MS.gene77526.t1	MTR_4g072220	69.892	93	27	1	1	92	1	93	1.75e-43	136
MS.gene77526.t1	MTR_4g072640	74.725	91	21	2	1	90	1	90	1.96e-43	136
MS.gene77526.t1	MTR_4g072470	72.222	90	20	1	1	90	1	85	3.44e-43	135
MS.gene77526.t1	MTR_4g072530	72.527	91	23	2	1	90	1	90	4.30e-43	135
MS.gene77526.t1	MTR_4g072730	68.132	91	29	0	1	91	1	91	4.88e-43	135
MS.gene77526.t1	MTR_4g072570	68.478	92	29	0	1	92	1	92	8.92e-43	134
MS.gene77526.t1	MTR_4g072630	71.111	90	22	1	1	90	1	86	1.08e-42	134
MS.gene77526.t1	MTR_4g072465	70.000	90	23	1	1	90	1	86	1.68e-42	134
MS.gene77526.t1	MTR_4g072830	74.157	89	21	1	1	89	1	87	1.96e-42	134
MS.gene77526.t1	MTR_4g072460	66.304	92	31	0	1	92	1	92	5.39e-42	132
MS.gene77526.t1	MTR_3g084250	69.892	93	26	2	1	92	1	92	6.15e-42	132
MS.gene77526.t1	MTR_4g072580	70.000	90	22	1	1	90	1	85	6.83e-42	132
MS.gene77526.t1	MTR_4g072850	71.277	94	25	1	1	92	1	94	3.00e-41	130
MS.gene77526.t1	MTR_4g072610	72.222	90	19	2	1	90	1	84	5.63e-41	130
MS.gene77526.t1	MTR_4g072660	67.391	92	25	1	1	92	1	87	7.63e-41	129
MS.gene77526.t1	MTR_4g072720	70.000	90	23	1	1	90	1	86	1.60e-40	129
MS.gene77526.t1	MTR_4g072540	70.000	90	23	1	1	90	1	86	1.99e-40	128
MS.gene77526.t1	MTR_4g072650	72.222	90	19	2	1	90	1	84	5.00e-40	127
MS.gene77526.t1	MTR_3g084210	66.304	92	31	0	1	92	1	92	1.05e-39	127
MS.gene77526.t1	MTR_4g072510	70.000	90	23	1	1	90	1	86	2.13e-39	125
MS.gene77526.t1	MTR_5g008360	77.027	74	17	0	19	92	10	83	1.89e-38	123
MS.gene77526.t1	MTR_4g072600	68.966	87	22	1	1	87	1	82	1.94e-38	123
MS.gene77526.t1	MTR_4g072670	67.778	90	25	1	1	90	1	86	2.32e-38	123
MS.gene77526.t1	MTR_3g084190	64.130	92	33	0	1	92	1	92	7.93e-38	122
MS.gene77526.t1	MTR_4g072380	68.889	90	24	1	1	90	1	86	9.73e-38	122
MS.gene77526.t1	MTR_4g072590	68.889	90	23	1	1	90	1	85	1.35e-37	121
MS.gene77526.t1	MTR_5g008370	83.824	68	11	0	24	91	24	91	1.88e-37	122
MS.gene77526.t1	MTR_8g461420	64.444	90	32	0	1	90	1	90	2.10e-37	121
MS.gene77526.t1	MTR_3g110045	66.667	90	30	0	3	92	62	151	2.79e-37	122
MS.gene77526.t1	MTR_8g461400	68.478	92	3	1	1	92	1	66	2.82e-37	120
MS.gene77526.t1	MTR_4g072820	67.778	90	24	2	1	90	1	85	3.89e-37	120
MS.gene77526.t1	MTR_3g084230	64.444	90	32	0	1	90	1	90	8.75e-37	119
MS.gene77526.t1	MTR_4g072940	75.000	72	18	0	21	92	53	124	1.99e-36	119
MS.gene77526.t1	MTR_3g084160	63.043	92	34	0	1	92	1	92	2.20e-36	118
MS.gene77526.t1	MTR_4g072690	67.778	90	24	1	1	90	1	85	1.35e-35	116
MS.gene77526.t1	MTR_4g072550	65.854	82	28	0	11	92	22	103	9.58e-35	114
MS.gene77526.t1	MTR_4g072450	66.667	90	25	1	1	90	1	85	1.13e-34	114
MS.gene77526.t1	MTR_5g008350	67.089	79	21	1	1	79	1	74	1.21e-34	113
MS.gene77526.t1	MTR_4g072980	56.842	95	38	2	1	92	1	95	2.37e-33	110
MS.gene77526.t1	MTR_4g072290	61.957	92	22	2	1	92	1	79	2.80e-33	110
MS.gene77526.t1	MTR_4g072770	74.242	66	17	0	25	90	15	80	5.84e-32	107
MS.gene77526.t1	MTR_4g072560	53.061	98	38	3	1	90	1	98	4.01e-31	105
MS.gene77526.t1	MTR_4g072910	60.465	86	27	1	5	90	22	100	7.26e-31	105
MS.gene77526.t1	MTR_3g117640	65.217	69	23	1	24	91	33	101	1.79e-29	101
MS.gene77526.t1	MTR_3g110035	66.667	66	22	0	27	92	73	138	1.05e-27	98.2
MS.gene77526.t1	MTR_4g072280	64.000	75	26	1	1	74	1	75	2.68e-27	95.1
MS.gene77526.t1	MTR_4g072750	66.216	74	21	2	1	71	1	73	1.10e-26	94.0
MS.gene77526.t1	MTR_3g113310	60.000	65	25	1	23	87	40	103	1.02e-24	89.7
MS.gene77526.t1	MTR_3g117610	61.538	65	24	1	23	87	43	106	6.27e-24	87.8
MS.gene77526.t1	MTR_4g072930	46.809	94	44	2	3	90	17	110	1.05e-23	87.0
MS.gene77526.t1	MTR_6g077850	55.224	67	30	0	24	90	33	99	1.42e-23	86.7
MS.gene77526.t1	MTR_4g072190	50.602	83	39	2	5	87	17	97	1.80e-23	86.3
MS.gene77526.t1	MTR_5g021820	46.429	84	42	2	4	87	21	101	5.25e-20	77.4
MS.gene77526.t1	MTR_8g076040	54.688	64	28	1	24	87	40	102	7.81e-20	77.0
MS.gene77526.t1	MTR_4g072840	51.111	90	14	4	1	90	1	60	2.23e-19	74.7
MS.gene77526.t1	MTR_2g043960	54.839	62	27	1	24	85	75	135	6.15e-19	76.3
MS.gene77526.t1	MTR_1g094750	49.412	85	38	2	5	85	26	109	1.46e-18	74.3
MS.gene77526.t1	MTR_4g124750	53.125	64	29	1	24	87	68	130	1.84e-18	75.1
MS.gene77526.t1	MTR_4g005310	46.053	76	40	1	11	85	48	123	1.90e-17	72.4
MS.gene77526.t1	MTR_1g009150	56.452	62	26	1	24	85	70	130	3.14e-17	72.4
MS.gene77526.t1	MTR_4g005320	54.098	61	27	1	25	85	70	129	8.48e-17	70.9
MS.gene77526.t1	MTR_3g105900	83.333	36	6	0	24	59	1171	1206	2.92e-15	69.7
MS.gene77526.t1	MTR_3g109160	52.239	67	31	1	25	91	69	134	4.27e-15	66.6
MS.gene77526.t1	MTR_8g461210	44.186	86	40	3	4	82	7	91	4.37e-15	65.5
MS.gene77526.t1	MTR_1g024085	45.783	83	39	3	4	82	13	93	7.91e-15	65.5
MS.gene77526.t1	MTR_7g118010	43.836	73	38	2	17	87	15	86	1.18e-14	63.9
MS.gene77526.t1	MTR_0388s0020	40.000	80	44	2	11	87	61	139	2.23e-14	64.3
MS.gene77526.t1	MTR_4g072160	52.381	63	27	2	24	85	36	96	3.50e-14	63.5
MS.gene77526.t1	MTR_3g092220	47.692	65	31	2	20	82	28	91	5.08e-14	62.4
MS.gene77526.t1	MTR_3g098970	33.750	80	52	1	13	92	41	119	6.26e-14	63.2
MS.gene77526.t1	MTR_7g101740	48.438	64	32	1	24	87	39	101	1.52e-13	61.2
MS.gene77526.t1	MTR_1g061570	47.059	68	35	1	24	91	18	84	2.26e-13	61.2
MS.gene77526.t1	MTR_8g026730	46.032	63	31	2	25	85	27	88	3.90e-13	60.1
MS.gene77526.t1	MTR_4g021810	45.570	79	39	3	5	82	8	83	5.42e-13	59.7
MS.gene77526.t1	MTR_7g405740	47.541	61	31	1	25	85	67	126	7.55e-13	60.5
MS.gene77526.t1	MTR_1g063950	45.161	62	33	1	24	85	47	107	9.37e-13	59.7
MS.gene77526.t1	MTR_3g097120	43.421	76	34	2	18	85	2	76	1.02e-12	58.9
MS.gene77526.t1	MTR_8g101530	39.726	73	43	1	16	88	31	102	1.02e-11	57.4
MS.gene77526.t1	MTR_1g059770	37.838	74	39	2	14	87	44	110	5.37e-11	55.1
MS.gene77526.t1	MTR_5g008380	75.000	32	8	0	59	90	246	277	8.04e-11	56.6
MS.gene77526.t1	MTR_8g101520	36.364	88	50	2	8	90	28	114	8.09e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77526.t1	AT4G38840	73.529	68	17	1	24	90	32	99	3.48e-35	115
MS.gene77526.t1	AT5G18020	64.474	76	26	1	16	90	15	90	3.91e-33	110
MS.gene77526.t1	AT5G18050	63.158	76	27	1	16	90	15	90	3.22e-32	108
MS.gene77526.t1	AT5G18060	63.158	76	27	1	16	90	15	90	6.78e-32	107
MS.gene77526.t1	AT2G21200	66.667	72	23	1	19	89	15	86	1.53e-31	106
MS.gene77526.t1	AT5G18080	68.657	67	20	1	25	90	24	90	1.58e-31	106
MS.gene77526.t1	AT5G18030	67.164	67	21	1	25	90	22	88	3.46e-31	105
MS.gene77526.t1	AT4G38825	63.889	72	25	1	20	90	18	89	9.54e-31	104
MS.gene77526.t1	AT4G34770	66.667	75	23	1	19	91	29	103	5.21e-30	102
MS.gene77526.t1	AT5G18010	65.672	67	22	1	25	90	24	90	6.19e-30	102
MS.gene77526.t1	AT2G21210	50.526	95	42	2	1	90	1	95	6.59e-30	102
MS.gene77526.t1	AT4G34800	53.261	92	36	2	1	89	1	88	3.07e-29	100
MS.gene77526.t1	AT3G03820	55.682	88	36	1	7	91	9	96	5.62e-29	100
MS.gene77526.t1	AT2G21210	50.526	95	42	2	1	90	68	162	5.80e-29	102
MS.gene77526.t1	AT3G03840	61.644	73	26	1	21	91	23	95	1.16e-28	99.4
MS.gene77526.t1	AT3G03850	66.176	68	21	1	26	91	26	93	2.47e-28	98.2
MS.gene77526.t1	AT4G38850	57.831	83	23	2	9	88	14	87	3.10e-28	97.8
MS.gene77526.t1	AT4G34810	63.235	68	21	1	24	87	47	114	6.22e-28	98.2
MS.gene77526.t1	AT3G03830	50.549	91	37	2	8	90	2	92	4.97e-26	92.4
MS.gene77526.t1	AT4G13790	52.439	82	32	2	9	88	14	90	8.87e-26	92.0
MS.gene77526.t1	AT4G34790	65.672	67	20	2	25	88	39	105	7.28e-25	90.1
MS.gene77526.t1	AT4G34780	55.844	77	31	1	17	90	20	96	1.01e-24	89.7
MS.gene77526.t1	AT4G38860	60.000	65	26	0	23	87	38	102	3.93e-24	88.2
MS.gene77526.t1	AT1G75580	55.405	74	32	1	14	87	33	105	1.91e-23	86.3
MS.gene77526.t1	AT4G34760	58.462	65	26	1	23	87	41	104	3.57e-22	83.2
MS.gene77526.t1	AT2G21220	55.385	65	28	1	23	87	38	101	1.49e-21	81.6
MS.gene77526.t1	AT4G36110	54.545	66	29	1	24	89	39	103	2.04e-20	78.6
MS.gene77526.t1	AT2G16580	55.385	65	28	1	23	87	42	105	3.18e-20	78.2
MS.gene77526.t1	AT2G18010	53.030	66	30	1	24	89	47	111	1.14e-19	77.0
MS.gene77526.t1	AT3G43120	53.226	62	28	1	24	85	78	138	2.80e-19	77.4
MS.gene77526.t1	AT1G19830	60.000	60	23	1	23	82	46	104	3.04e-19	75.9
MS.gene77526.t1	AT5G20810	54.839	62	27	1	24	85	78	138	1.98e-18	75.1
MS.gene77526.t1	AT5G20810	54.839	62	27	1	24	85	78	138	4.75e-18	74.7
MS.gene77526.t1	AT3G20220	54.839	62	26	2	25	85	47	107	1.04e-17	72.0
MS.gene77526.t1	AT5G10990	48.611	72	36	1	11	82	27	97	1.79e-16	69.7
MS.gene77526.t1	AT1G75590	48.810	84	37	3	4	82	16	98	1.94e-16	69.7
MS.gene77526.t1	AT5G66260	43.478	92	48	2	2	90	8	98	2.59e-16	68.2
MS.gene77526.t1	AT4G34750	41.026	78	45	1	10	87	22	98	6.26e-16	68.6
MS.gene77526.t1	AT4G34750	41.026	78	45	1	10	87	22	98	6.26e-16	68.6
MS.gene77526.t1	AT1G19840	46.988	83	39	2	4	82	16	97	1.29e-15	67.8
MS.gene77526.t1	AT2G46690	35.955	89	53	2	6	91	5	92	5.60e-15	65.1
MS.gene77526.t1	AT3G51200	50.820	61	28	2	24	83	38	97	1.77e-14	63.5
MS.gene77526.t1	AT2G24400	51.515	66	31	1	20	85	59	123	2.12e-14	65.1
MS.gene77526.t1	AT4G31320	52.459	61	28	1	25	85	80	139	2.22e-14	65.1
MS.gene77526.t1	AT3G61900	39.286	84	47	2	10	90	15	97	2.52e-14	63.9
MS.gene77526.t1	AT2G37030	41.026	78	43	2	11	86	33	109	4.94e-14	62.8
MS.gene77526.t1	AT3G12830	37.805	82	50	1	4	85	29	109	8.98e-13	59.7
MS.gene77526.t1	AT4G00880	50.000	64	29	2	24	85	27	89	1.37e-12	59.3
MS.gene77526.t1	AT3G53250	44.444	63	31	1	24	86	51	109	2.15e-12	58.5
MS.gene77526.t1	AT5G53590	42.029	69	34	2	24	87	45	112	2.59e-12	58.9
MS.gene77526.t1	AT3G53250	44.444	63	31	1	24	86	82	140	4.05e-12	58.5
MS.gene77526.t1	AT3G60690	40.580	69	37	2	25	90	88	155	6.12e-12	58.5
MS.gene77526.t1	AT3G03847	42.353	85	45	4	3	85	48	130	7.54e-12	57.4
MS.gene77526.t1	AT2G45210	39.437	71	39	2	20	87	74	143	8.47e-12	57.8
MS.gene77526.t1	AT4G09530	40.964	83	36	4	13	88	22	98	1.64e-11	55.8
MS.gene77526.t1	AT1G56150	45.902	61	32	1	25	85	38	97	2.16e-11	55.8
MS.gene77526.t1	AT3G09870	50.000	56	25	2	24	77	44	98	2.52e-11	55.8

Find 23 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATATTACTTCTCACTTCAA+TGG	0.336576	3.2:-72565848	MS.gene77526:CDS
GTCTAATAGCTGCAGATAAA+CGG	0.400045	3.2:+72566089	None:intergenic
ATATTACTTCTCACTTCAAT+GGG	0.449975	3.2:-72565847	MS.gene77526:CDS
AGTCAAGCCGAGGAAGAATT+CGG	0.460318	3.2:-72565926	MS.gene77526:CDS
GTTTATCTGCAGCTATTAGA+CGG	0.469528	3.2:-72566087	MS.gene77526:CDS
GTCATATCCGAATTCTTCCT+CGG	0.504640	3.2:+72565919	None:intergenic
TTTATCTGCAGCTATTAGAC+GGG	0.506635	3.2:-72566086	MS.gene77526:CDS
GGAATTGTGAGGCCACCCAT+TGG	0.542714	3.2:+72565893	None:intergenic
TTCGGATATGACCATCCAAT+GGG	0.544317	3.2:-72565908	MS.gene77526:CDS
AAAGTATTGAATGTGCCAAA+GGG	0.551978	3.2:-72566037	MS.gene77526:CDS
AAAAGTATTGAATGTGCCAA+AGG	0.551994	3.2:-72566038	MS.gene77526:CDS
GGCTATCTTGCAGTGTACGT+TGG	0.552838	3.2:-72566016	MS.gene77526:CDS
TACACTGCAAGATAGCCCTT+TGG	0.556003	3.2:+72566022	None:intergenic
AAGAAAACGTCTTCTGTGCA+AGG	0.577878	3.2:+72565872	None:intergenic
TTGTGAGGCCACCCATTGGA+TGG	0.581207	3.2:+72565897	None:intergenic
ATTCGGATATGACCATCCAA+TGG	0.587373	3.2:-72565909	MS.gene77526:CDS
AGCTTGGTTCAAGTATGACA+TGG	0.610689	3.2:+72565967	None:intergenic
GCTTGGTTCAAGTATGACAT+GGG	0.618074	3.2:+72565968	None:intergenic
AAATTTGTTGAGTCAAGCCG+AGG	0.657386	3.2:-72565936	MS.gene77526:CDS
GGATATGACCATCCAATGGG+TGG	0.665818	3.2:-72565905	MS.gene77526:CDS
CTTGGTTCAAGTATGACATG+GGG	0.689184	3.2:+72565969	None:intergenic
ACGTTGGAGAGCAAATGAAG+CGG	0.725765	3.2:-72566000	MS.gene77526:CDS
CTTCTGTGCAAGGAATTGTG+AGG	0.728722	3.2:+72565882	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATATTACTTCTCACTTCAAT+GGG	-	chr3.2:72566091-72566110	MS.gene77526:CDS	25.0%
!!	CATTCAATACTTTTGATGTT+TGG	+	chr3.2:72565894-72565913	None:intergenic	25.0%
!!!	ACAAATTTTGAAATGAAGCT+TGG	+	chr3.2:72565990-72566009	None:intergenic	25.0%
	CATATTACTTCTCACTTCAA+TGG	-	chr3.2:72566090-72566109	MS.gene77526:CDS	30.0%
!!	AAAAGTATTGAATGTGCCAA+AGG	-	chr3.2:72565900-72565919	MS.gene77526:CDS	30.0%
!!	AAAGTATTGAATGTGCCAAA+GGG	-	chr3.2:72565901-72565920	MS.gene77526:CDS	30.0%
	GTCTAATAGCTGCAGATAAA+CGG	+	chr3.2:72565852-72565871	None:intergenic	35.0%
	GTTTATCTGCAGCTATTAGA+CGG	-	chr3.2:72565851-72565870	MS.gene77526:CDS	35.0%
	TTTATCTGCAGCTATTAGAC+GGG	-	chr3.2:72565852-72565871	MS.gene77526:CDS	35.0%
	AAGAAAACGTCTTCTGTGCA+AGG	+	chr3.2:72566069-72566088	None:intergenic	40.0%
	AGCTTGGTTCAAGTATGACA+TGG	+	chr3.2:72565974-72565993	None:intergenic	40.0%
	ATTCGGATATGACCATCCAA+TGG	-	chr3.2:72566029-72566048	MS.gene77526:CDS	40.0%
	CTTGGTTCAAGTATGACATG+GGG	+	chr3.2:72565972-72565991	None:intergenic	40.0%
	GCTTGGTTCAAGTATGACAT+GGG	+	chr3.2:72565973-72565992	None:intergenic	40.0%
	GTCATATCCGAATTCTTCCT+CGG	+	chr3.2:72566022-72566041	None:intergenic	40.0%
	TTCGGATATGACCATCCAAT+GGG	-	chr3.2:72566030-72566049	MS.gene77526:CDS	40.0%
!!	AAATTTGTTGAGTCAAGCCG+AGG	-	chr3.2:72566002-72566021	MS.gene77526:CDS	40.0%
	ACGTTGGAGAGCAAATGAAG+CGG	-	chr3.2:72565938-72565957	MS.gene77526:CDS	45.0%
	AGTCAAGCCGAGGAAGAATT+CGG	-	chr3.2:72566012-72566031	MS.gene77526:CDS	45.0%
	CTTCTGTGCAAGGAATTGTG+AGG	+	chr3.2:72566059-72566078	None:intergenic	45.0%
	TACACTGCAAGATAGCCCTT+TGG	+	chr3.2:72565919-72565938	None:intergenic	45.0%
	GGATATGACCATCCAATGGG+TGG	-	chr3.2:72566033-72566052	MS.gene77526:CDS	50.0%
	GGCTATCTTGCAGTGTACGT+TGG	-	chr3.2:72565922-72565941	MS.gene77526:CDS	50.0%
	GGAATTGTGAGGCCACCCAT+TGG	+	chr3.2:72566048-72566067	None:intergenic	55.0%
	TTGTGAGGCCACCCATTGGA+TGG	+	chr3.2:72566044-72566063	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	72565841	72566119	72565841	ID=MS.gene77526
chr3.2	mRNA	72565841	72566119	72565841	ID=MS.gene77526.t1;Parent=MS.gene77526
chr3.2	exon	72565841	72566119	72565841	ID=MS.gene77526.t1.exon1;Parent=MS.gene77526.t1
chr3.2	CDS	72565841	72566119	72565841	ID=cds.MS.gene77526.t1;Parent=MS.gene77526.t1

Gene Sequence	>MS.gene77526 ATGGGTTTCCGTTTATCTGCAGCTATTAGACGGGCTTCATTCAGCAGTAGCCAAACATCAAAAGTATTGAATGTGCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCAAGCTTCATTTCAAAATTTGTTGAGTCAAGCCGAGGAAGAATTCGGATATGACCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGACGTTTTCTTGCATATTACTTCTCACTTCAATGGGCTATAA
Protein sequence	>MS.gene77526.t1 MGFRLSAAIRRASFSSSQTSKVLNVPKGYLAVYVGEQMKRFVIPMSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFLHITSHFNGL