AlfalfaGEDB | MS.gene062979

M. sativa cultivar XinJiangDaYe / MS.gene062979

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062979.t1	XP_003607146.1	91.8	85	7	0	1	85	1	85	6.40E-37	162.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062979.t1	P33079	69.2	91	22	1	1	85	1	91	2.0e-31	136.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062979.t1	G7JMA0	91.8	85	7	0	1	85	1	85	4.6e-37	162.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062979	MS.gene057806	PPI
MS.gene062975	MS.gene062979	PPI
MS.gene062979	MS.gene062964	PPI
MS.gene50689	MS.gene062979	PPI
MS.gene062979	MS.gene77525	PPI
MS.gene062979	MS.gene50658	PPI
MS.gene062979	MS.gene057777	PPI
MS.gene062979	MS.gene28863	PPI
MS.gene003576	MS.gene062979	PPI
MS.gene062979	MS.gene062945	PPI
MS.gene062979	MS.gene057804	PPI
MS.gene062979	MS.gene50651	PPI
MS.gene062979	MS.gene003607	PPI
MS.gene062979	MS.gene50656	PPI
MS.gene062979	MS.gene062969	PPI
MS.gene062979	MS.gene50686	PPI
MS.gene062979	MS.gene70683	PPI
MS.gene062979	MS.gene062962	PPI
MS.gene062970	MS.gene062979	PPI
MS.gene062979	MS.gene50666	PPI
MS.gene062979	MS.gene062985	PPI
MS.gene062979	MS.gene057784	PPI
MS.gene062942	MS.gene062979	PPI
MS.gene062979	MS.gene50669	PPI
MS.gene062979	MS.gene062953	PPI
MS.gene062979	MS.gene003622	PPI
MS.gene062979	MS.gene003599	PPI
MS.gene062979	MS.gene23368	PPI
MS.gene062972	MS.gene062979	PPI
MS.gene062979	MS.gene003585	PPI
MS.gene062979	MS.gene003623	PPI
MS.gene062979	MS.gene057817	PPI
MS.gene062979	MS.gene50668	PPI
MS.gene062979	MS.gene003581	PPI
MS.gene062979	MS.gene70684	PPI
MS.gene062979	MS.gene062958	PPI
MS.gene062979	MS.gene003628	PPI
MS.gene062979	MS.gene057798	PPI
MS.gene003582	MS.gene062979	PPI
MS.gene062979	MS.gene003612	PPI
MS.gene062979	MS.gene062983	PPI
MS.gene062979	MS.gene062967	PPI
MS.gene062979	MS.gene003579	PPI
MS.gene062979	MS.gene062940	PPI
MS.gene062979	MS.gene062989	PPI
MS.gene062979	MS.gene003595	PPI
MS.gene50772	MS.gene062979	PPI
MS.gene062979	MS.gene062959	PPI
MS.gene057809	MS.gene062979	PPI
MS.gene062979	MS.gene003606	PPI
MS.gene062979	MS.gene50664	PPI
MS.gene062979	MS.gene50688	PPI
MS.gene062979	MS.gene057785	PPI
MS.gene062979	MS.gene50670	PPI
MS.gene062978	MS.gene062979	PPI
MS.gene062979	MS.gene057800	PPI
MS.gene062979	MS.gene70685	PPI
MS.gene062979	MS.gene062941	PPI
MS.gene003593	MS.gene062979	PPI
MS.gene062979	MS.gene50662	PPI
MS.gene062979	MS.gene50660	PPI
MS.gene003580	MS.gene062979	PPI
MS.gene062979	MS.gene057799	PPI
MS.gene062979	MS.gene057794	PPI
MS.gene062979	MS.gene003629	PPI
MS.gene062979	MS.gene003603	PPI
MS.gene062979	MS.gene003630	PPI
MS.gene062979	MS.gene062966	PPI
MS.gene062979	MS.gene062980	PPI
MS.gene062979	MS.gene23367	PPI
MS.gene062979	MS.gene003610	PPI
MS.gene057816	MS.gene062979	PPI
MS.gene062979	MS.gene057802	PPI
MS.gene062979	MS.gene50773	PPI
MS.gene062979	MS.gene057796	PPI
MS.gene062979	MS.gene50682	PPI
MS.gene062979	MS.gene50653	PPI
MS.gene062979	MS.gene003597	PPI
MS.gene062979	MS.gene003598	PPI
MS.gene50657	MS.gene062979	PPI
MS.gene062979	MS.gene50690	PPI
MS.gene062979	MS.gene057780	PPI
MS.gene062979	MS.gene057788	PPI
MS.gene50683	MS.gene062979	PPI
MS.gene062979	MS.gene062944	PPI
MS.gene062979	MS.gene50655	PPI
MS.gene062979	MS.gene50685	PPI
MS.gene057807	MS.gene062979	PPI
MS.gene062979	MS.gene003613	PPI
MS.gene062979	MS.gene003584	PPI
MS.gene062979	MS.gene057791	PPI
MS.gene062979	MS.gene50674	PPI
MS.gene062979	MS.gene057782	PPI
MS.gene062979	MS.gene057779	PPI
MS.gene003626	MS.gene062979	PPI
MS.gene062979	MS.gene50673	PPI
MS.gene062946	MS.gene062979	PPI
MS.gene062979	MS.gene062965	PPI
MS.gene062979	MS.gene50771	PPI
MS.gene057805	MS.gene062979	PPI
MS.gene003605	MS.gene062979	PPI
MS.gene062979	MS.gene022358	PPI
MS.gene062979	MS.gene062954	PPI
MS.gene062971	MS.gene062979	PPI
MS.gene23373	MS.gene062979	PPI
MS.gene062979	MS.gene23369	PPI
MS.gene062979	MS.gene062986	PPI
MS.gene062979	MS.gene057783	PPI
MS.gene062979	MS.gene50770	PPI
MS.gene062979	MS.gene062987	PPI
MS.gene062979	MS.gene057811	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062979.t1	MTR_4g072740	91.765	85	7	0	1	85	1	85	1.67e-54	163
MS.gene062979.t1	MTR_4g072490	87.059	85	11	0	1	85	1	85	5.41e-53	160
MS.gene062979.t1	MTR_4g072580	89.412	85	9	0	1	85	1	85	6.21e-53	159
MS.gene062979.t1	MTR_4g072600	87.059	85	11	0	1	85	1	85	7.53e-51	154
MS.gene062979.t1	MTR_4g072470	87.059	85	11	0	1	85	1	85	1.88e-50	153
MS.gene062979.t1	MTR_4g072370	85.227	88	10	1	1	85	1	88	1.90e-49	151
MS.gene062979.t1	MTR_4g072830	86.207	87	9	1	1	84	1	87	6.30e-49	149
MS.gene062979.t1	MTR_4g072330	81.818	88	13	1	1	85	1	88	6.95e-49	149
MS.gene062979.t1	MTR_4g072465	81.395	86	15	1	1	85	1	86	2.05e-47	145
MS.gene062979.t1	MTR_4g072630	80.233	86	16	1	1	85	1	86	4.56e-47	145
MS.gene062979.t1	MTR_3g084150	76.923	91	14	2	1	85	1	90	1.14e-45	141
MS.gene062979.t1	MTR_3g084170	75.556	90	17	1	1	85	1	90	2.54e-45	140
MS.gene062979.t1	MTR_8g461410	75.824	91	15	2	1	85	1	90	3.13e-45	140
MS.gene062979.t1	MTR_4g072540	83.721	86	13	1	1	85	1	86	4.11e-45	140
MS.gene062979.t1	MTR_3g084180	75.824	91	15	2	1	85	1	90	6.53e-45	139
MS.gene062979.t1	MTR_4g072380	80.233	86	16	1	1	85	1	86	1.15e-44	139
MS.gene062979.t1	MTR_4g072670	84.884	86	12	1	1	85	1	86	1.75e-44	138
MS.gene062979.t1	MTR_3g084240	74.444	90	18	1	1	85	1	90	1.89e-44	138
MS.gene062979.t1	MTR_4g072310	73.626	91	18	1	1	85	1	91	2.80e-44	138
MS.gene062979.t1	MTR_3g110038	73.333	90	19	1	1	85	1	90	3.54e-44	137
MS.gene062979.t1	MTR_4g072880	72.527	91	19	1	1	85	1	91	4.20e-44	137
MS.gene062979.t1	MTR_4g072610	77.647	85	18	1	1	85	1	84	5.24e-44	137
MS.gene062979.t1	MTR_4g072820	79.070	86	16	2	1	85	1	85	1.22e-43	136
MS.gene062979.t1	MTR_4g072650	77.647	85	18	1	1	85	1	84	2.90e-43	135
MS.gene062979.t1	MTR_4g072250	75.824	91	15	2	1	85	1	90	3.04e-43	135
MS.gene062979.t1	MTR_4g072720	81.395	86	15	1	1	85	1	86	5.37e-43	134
MS.gene062979.t1	MTR_3g084220	72.222	90	20	1	1	85	1	90	5.68e-43	134
MS.gene062979.t1	MTR_4g072590	84.706	85	13	0	1	85	1	85	6.64e-43	134
MS.gene062979.t1	MTR_4g050700	72.527	91	19	1	1	85	1	91	8.23e-43	134
MS.gene062979.t1	MTR_2g012410	72.527	91	19	1	1	85	1	91	8.23e-43	134
MS.gene062979.t1	MTR_3g110032	71.429	91	20	1	1	85	1	91	8.98e-43	134
MS.gene062979.t1	MTR_4g072870	70.330	91	21	1	1	85	1	91	1.26e-42	134
MS.gene062979.t1	MTR_5g008350	83.784	74	12	0	1	74	1	74	2.34e-42	132
MS.gene062979.t1	MTR_4g072510	80.233	86	16	1	1	85	1	86	2.88e-42	132
MS.gene062979.t1	MTR_3g084250	72.222	90	20	1	1	85	1	90	4.42e-42	132
MS.gene062979.t1	MTR_4g072690	82.353	85	15	0	1	85	1	85	6.58e-42	132
MS.gene062979.t1	MTR_4g072570	72.222	90	20	1	1	85	1	90	9.96e-42	131
MS.gene062979.t1	MTR_4g072450	83.529	85	14	0	1	85	1	85	1.19e-41	131
MS.gene062979.t1	MTR_4g072230	73.626	91	16	2	1	85	1	89	3.27e-41	130
MS.gene062979.t1	MTR_4g072270	69.231	91	22	1	1	85	1	91	6.55e-41	129
MS.gene062979.t1	MTR_4g072860	72.527	91	19	1	1	85	1	91	6.77e-41	129
MS.gene062979.t1	MTR_4g072480	68.889	90	23	1	1	85	1	90	8.74e-41	129
MS.gene062979.t1	MTR_3g110042	74.444	90	16	2	1	84	1	89	9.45e-41	129
MS.gene062979.t1	MTR_3g084260	70.330	91	21	1	1	85	1	91	1.07e-40	129
MS.gene062979.t1	MTR_4g072850	73.913	92	17	1	1	85	1	92	1.26e-40	129
MS.gene062979.t1	MTR_4g072240	67.033	91	24	1	1	85	1	91	1.75e-40	128
MS.gene062979.t1	MTR_3g117630	75.904	83	14	1	9	85	8	90	3.64e-40	127
MS.gene062979.t1	MTR_4g072660	68.235	85	27	0	1	85	1	85	4.51e-40	127
MS.gene062979.t1	MTR_4g072620	66.667	90	25	1	1	85	1	90	1.47e-39	126
MS.gene062979.t1	MTR_4g072300	65.934	91	25	1	1	85	1	91	1.81e-39	125
MS.gene062979.t1	MTR_4g072890	67.033	91	24	1	1	85	1	91	2.14e-39	125
MS.gene062979.t1	MTR_4g072220	67.033	91	24	1	1	85	1	91	2.56e-39	125
MS.gene062979.t1	MTR_4g072260	65.934	91	25	1	1	85	1	91	2.58e-39	125
MS.gene062979.t1	MTR_4g072680	66.667	90	25	1	1	85	1	90	5.12e-39	125
MS.gene062979.t1	MTR_4g072500	69.231	91	21	2	1	85	1	90	1.01e-38	124
MS.gene062979.t1	MTR_8g461420	68.889	90	23	1	1	85	1	90	3.06e-38	122
MS.gene062979.t1	MTR_3g084190	67.778	90	24	1	1	85	1	90	4.54e-38	122
MS.gene062979.t1	MTR_4g072640	69.231	91	21	2	1	85	1	90	5.53e-38	122
MS.gene062979.t1	MTR_4g072730	64.444	90	27	1	1	85	1	90	8.30e-38	122
MS.gene062979.t1	MTR_3g084210	67.778	90	24	1	1	85	1	90	9.90e-38	121
MS.gene062979.t1	MTR_4g072460	64.444	90	27	1	1	85	1	90	1.15e-37	121
MS.gene062979.t1	MTR_3g084230	67.778	90	24	1	1	85	1	90	1.29e-37	121
MS.gene062979.t1	MTR_4g072940	72.222	90	18	1	3	85	33	122	1.31e-37	122
MS.gene062979.t1	MTR_4g072530	67.033	91	23	2	1	85	1	90	2.20e-37	120
MS.gene062979.t1	MTR_3g110045	69.318	88	22	1	3	85	62	149	1.47e-36	120
MS.gene062979.t1	MTR_5g008360	70.513	78	23	0	8	85	4	81	2.41e-36	117
MS.gene062979.t1	MTR_3g084160	67.033	91	23	2	1	85	1	90	4.91e-36	117
MS.gene062979.t1	MTR_5g008370	67.778	90	24	2	1	85	1	90	1.08e-34	115
MS.gene062979.t1	MTR_4g072980	56.522	92	32	2	1	84	1	92	1.44e-32	108
MS.gene062979.t1	MTR_3g084200	70.833	72	16	1	1	67	1	72	2.89e-32	108
MS.gene062979.t1	MTR_4g072560	53.608	97	32	2	1	84	1	97	5.87e-32	107
MS.gene062979.t1	MTR_4g072770	63.529	85	26	1	1	85	1	80	1.07e-31	106
MS.gene062979.t1	MTR_4g072910	65.278	72	25	0	14	85	29	100	4.28e-31	105
MS.gene062979.t1	MTR_4g072550	66.197	71	24	0	15	85	31	101	2.37e-30	103
MS.gene062979.t1	MTR_4g072290	60.000	85	26	1	1	85	1	77	6.41e-29	99.0
MS.gene062979.t1	MTR_3g117640	48.000	100	37	2	1	85	1	100	9.64e-29	99.4
MS.gene062979.t1	MTR_3g110035	68.750	64	20	0	22	85	73	136	8.18e-28	98.2
MS.gene062979.t1	MTR_4g072750	64.000	75	18	2	1	67	1	74	4.75e-25	89.4
MS.gene062979.t1	MTR_4g072280	58.667	75	25	1	1	69	1	75	1.10e-24	88.2
MS.gene062979.t1	MTR_6g077850	58.209	67	28	0	19	85	33	99	1.63e-24	88.6
MS.gene062979.t1	MTR_3g113310	56.716	67	28	1	18	84	40	105	3.02e-23	85.5
MS.gene062979.t1	MTR_3g117610	60.000	65	25	1	18	82	43	106	4.85e-23	85.1
MS.gene062979.t1	MTR_4g072190	51.190	84	36	2	5	84	17	99	7.09e-23	84.3
MS.gene062979.t1	MTR_4g072930	51.250	80	34	2	11	85	31	110	2.92e-22	83.2
MS.gene062979.t1	MTR_4g072840	51.765	85	16	2	1	85	1	60	3.25e-21	79.0
MS.gene062979.t1	MTR_8g461400	48.889	90	15	2	1	85	1	64	2.02e-20	77.0
MS.gene062979.t1	MTR_5g021820	53.030	66	30	1	19	84	39	103	3.17e-19	75.1
MS.gene062979.t1	MTR_8g076040	54.688	64	28	1	19	82	40	102	1.31e-18	73.6
MS.gene062979.t1	MTR_2g043960	57.627	59	24	1	19	77	75	132	5.51e-18	73.6
MS.gene062979.t1	MTR_1g094750	54.839	62	27	1	19	80	49	109	7.07e-18	72.0
MS.gene062979.t1	MTR_4g124750	55.932	59	25	1	19	77	68	125	2.86e-17	71.6
MS.gene062979.t1	MTR_1g009150	53.623	69	31	1	12	80	63	130	1.20e-16	70.5
MS.gene062979.t1	MTR_7g101740	51.562	64	30	1	19	82	39	101	1.96e-16	68.6
MS.gene062979.t1	MTR_4g005310	50.000	66	32	1	16	80	58	123	2.10e-16	69.3
MS.gene062979.t1	MTR_1g063950	48.387	62	31	1	19	80	47	107	2.68e-16	68.2
MS.gene062979.t1	MTR_7g118010	39.759	83	47	2	5	85	8	89	6.60e-16	67.0
MS.gene062979.t1	MTR_3g092220	38.824	85	49	2	3	85	16	99	7.95e-16	67.0
MS.gene062979.t1	MTR_4g025830	47.059	68	32	2	20	84	79	145	8.17e-16	68.2
MS.gene062979.t1	MTR_3g105900	68.182	44	14	0	17	60	1169	1212	1.81e-15	69.7
MS.gene062979.t1	MTR_0388s0020	44.156	77	39	2	11	84	66	141	3.49e-15	66.2
MS.gene062979.t1	MTR_1g061570	53.226	62	28	1	19	80	18	78	3.74e-15	65.5
MS.gene062979.t1	MTR_1g024085	52.459	61	28	1	19	79	36	95	5.62e-15	65.5
MS.gene062979.t1	MTR_4g005320	50.820	61	29	1	20	80	70	129	8.69e-15	65.5
MS.gene062979.t1	MTR_4g072160	47.887	71	36	1	10	80	27	96	1.21e-14	64.3
MS.gene062979.t1	MTR_8g461210	50.000	68	30	2	19	83	34	100	1.46e-14	63.5
MS.gene062979.t1	MTR_3g109160	54.098	61	27	1	20	80	69	128	6.55e-14	63.2
MS.gene062979.t1	MTR_8g026730	42.647	68	36	2	20	85	27	93	1.35e-13	60.8
MS.gene062979.t1	MTR_7g405740	39.474	76	45	1	5	80	52	126	5.23e-13	60.8
MS.gene062979.t1	MTR_8g101520	46.154	65	34	1	21	85	51	114	2.50e-12	58.9
MS.gene062979.t1	MTR_2g095430	45.833	72	32	3	8	73	31	101	4.12e-12	57.8
MS.gene062979.t1	MTR_5g008380	81.250	32	6	0	54	85	246	277	7.81e-12	59.3
MS.gene062979.t1	MTR_3g097120	42.308	78	36	2	15	84	4	80	8.91e-12	56.2
MS.gene062979.t1	MTR_1g059770	38.462	65	39	1	20	84	49	112	1.38e-11	56.2
MS.gene062979.t1	MTR_4g021810	49.254	67	32	2	12	77	18	83	1.78e-11	55.5
MS.gene062979.t1	MTR_3g098970	31.081	74	50	1	12	85	45	117	2.01e-11	56.2
MS.gene062979.t1	MTR_8g096470	45.000	60	32	1	21	80	47	105	2.58e-11	55.1
MS.gene062979.t1	MTR_2g066830	39.744	78	41	3	2	77	41	114	4.07e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062979.t1	AT4G38840	70.588	68	19	1	19	85	32	99	4.38e-33	110
MS.gene062979.t1	AT5G18050	60.256	78	30	1	9	85	13	90	1.47e-31	106
MS.gene062979.t1	AT5G18060	61.538	78	29	1	9	85	13	90	3.77e-31	105
MS.gene062979.t1	AT5G18020	62.162	74	27	1	13	85	17	90	1.11e-30	103
MS.gene062979.t1	AT2G21200	60.526	76	29	1	10	84	11	86	1.37e-30	103
MS.gene062979.t1	AT5G18080	59.494	79	30	2	8	85	13	90	1.53e-30	103
MS.gene062979.t1	AT5G18030	58.537	82	33	1	5	85	7	88	3.19e-30	102
MS.gene062979.t1	AT4G38825	61.111	72	27	1	15	85	18	89	5.03e-30	102
MS.gene062979.t1	AT4G34800	62.195	82	27	2	1	78	1	82	7.38e-30	102
MS.gene062979.t1	AT4G38850	59.259	81	26	2	8	85	13	89	1.03e-29	101
MS.gene062979.t1	AT2G21210	57.895	76	30	1	12	85	20	95	1.58e-29	101
MS.gene062979.t1	AT4G34810	67.089	79	21	2	11	84	39	117	1.72e-29	101
MS.gene062979.t1	AT5G18010	56.962	79	32	2	8	85	13	90	8.94e-29	99.0
MS.gene062979.t1	AT2G21210	57.895	76	30	1	12	85	87	162	9.21e-29	101
MS.gene062979.t1	AT4G13790	50.000	84	40	1	3	84	8	91	1.97e-28	98.2
MS.gene062979.t1	AT3G03840	54.023	87	32	2	1	85	14	94	9.00e-28	96.7
MS.gene062979.t1	AT4G34770	61.333	75	27	1	13	85	28	102	3.00e-27	95.5
MS.gene062979.t1	AT3G03850	56.627	83	30	2	5	85	14	92	1.64e-26	93.6
MS.gene062979.t1	AT3G03820	54.545	77	32	1	12	85	19	95	3.04e-26	92.8
MS.gene062979.t1	AT4G34780	61.972	71	24	1	17	84	25	95	9.53e-26	92.0
MS.gene062979.t1	AT3G03830	54.762	84	30	2	5	85	14	92	1.06e-25	91.3
MS.gene062979.t1	AT4G34790	61.538	65	23	1	20	82	39	103	7.55e-24	87.0
MS.gene062979.t1	AT4G38860	55.882	68	30	0	18	85	38	105	7.29e-23	84.7
MS.gene062979.t1	AT1G75580	58.209	67	27	1	18	84	42	107	2.16e-21	80.9
MS.gene062979.t1	AT2G21220	55.224	67	29	1	18	84	38	103	2.50e-21	80.5
MS.gene062979.t1	AT4G34760	55.224	67	29	1	18	84	41	106	6.77e-21	79.7
MS.gene062979.t1	AT1G19830	57.353	68	27	2	18	84	46	112	1.50e-18	73.9
MS.gene062979.t1	AT3G43120	55.932	59	25	1	19	77	78	135	3.44e-18	74.3
MS.gene062979.t1	AT2G16580	52.308	65	30	1	18	82	42	105	5.20e-18	72.4
MS.gene062979.t1	AT4G36110	53.125	64	29	1	19	82	39	101	7.11e-18	72.0
MS.gene062979.t1	AT3G20220	55.385	65	27	2	20	83	47	110	9.67e-18	72.0
MS.gene062979.t1	AT5G20810	57.627	59	24	1	19	77	78	135	2.05e-17	72.4
MS.gene062979.t1	AT5G20810	57.627	59	24	1	19	77	78	135	4.25e-17	72.0
MS.gene062979.t1	AT2G18010	51.562	64	30	1	19	82	47	109	1.07e-16	68.9
MS.gene062979.t1	AT5G66260	51.515	66	31	1	20	85	34	98	1.70e-16	68.2
MS.gene062979.t1	AT3G61900	40.964	83	45	2	6	85	16	97	2.80e-16	68.6
MS.gene062979.t1	AT2G37030	52.381	63	29	1	19	81	48	109	3.34e-16	68.2
MS.gene062979.t1	AT2G46690	41.250	80	43	2	9	85	13	91	6.10e-16	67.4
MS.gene062979.t1	AT3G51200	46.154	78	36	3	8	80	23	99	1.45e-15	65.9
MS.gene062979.t1	AT1G75590	52.459	61	28	1	19	79	41	100	3.80e-15	66.2
MS.gene062979.t1	AT5G10990	47.887	71	33	2	9	79	33	99	8.29e-15	65.1
MS.gene062979.t1	AT1G19840	50.000	72	33	2	10	79	29	99	9.49e-15	65.1
MS.gene062979.t1	AT3G53250	46.032	63	30	1	19	81	51	109	1.14e-14	64.3
MS.gene062979.t1	AT3G53250	46.032	63	30	1	19	81	82	140	1.82e-14	64.3
MS.gene062979.t1	AT4G34750	40.541	74	43	1	9	82	26	98	4.15e-14	63.5
MS.gene062979.t1	AT4G34750	40.541	74	43	1	9	82	26	98	4.15e-14	63.5
MS.gene062979.t1	AT4G22620	40.244	82	45	2	6	84	65	145	8.15e-14	62.8
MS.gene062979.t1	AT2G24400	49.315	73	35	2	9	80	52	123	1.97e-13	62.4
MS.gene062979.t1	AT4G12410	45.588	68	33	2	20	84	76	142	2.04e-13	61.6
MS.gene062979.t1	AT2G45210	41.096	73	39	2	15	84	74	145	2.21e-13	61.6
MS.gene062979.t1	AT4G31320	46.575	73	37	2	9	80	68	139	4.57e-13	61.6
MS.gene062979.t1	AT3G60690	44.118	68	34	2	20	84	88	154	5.78e-13	60.8
MS.gene062979.t1	AT4G00880	53.333	60	25	2	20	77	28	86	7.82e-13	59.3
MS.gene062979.t1	AT3G12830	39.474	76	45	1	9	84	39	113	5.17e-12	57.8
MS.gene062979.t1	AT1G56150	43.939	66	36	1	20	85	38	102	1.87e-11	55.5
MS.gene062979.t1	AT5G53590	38.889	72	38	2	19	85	45	115	2.81e-11	55.8
MS.gene062979.t1	AT1G16510	39.437	71	42	1	14	84	48	117	7.08e-11	55.1

Find 20 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTGGCTTAACAATTCT+TGG	0.200185	4.2:-35432159	None:intergenic
GGTTGGTTCAAGTATGATAT+AGG	0.341940	4.2:-35432130	None:intergenic
CTTAACAATTCTTGGAATGA+TGG	0.439859	4.2:-35432151	None:intergenic
GTTGGTTCAAGTATGATATA+GGG	0.441635	4.2:-35432129	None:intergenic
ATTCAAATTGTTCCTCAGCT+TGG	0.480012	4.2:-35432174	None:intergenic
ACAATTCTTGGAATGATGGT+TGG	0.495577	4.2:-35432147	None:intergenic
TTTGAATATGATCATCCAAC+GGG	0.507858	4.2:+35432190	MS.gene062979:CDS
GGATATCTTGCAGTATATGT+TGG	0.514243	4.2:+35432082	MS.gene062979:CDS
AAAAGTTGTGGACGTGCCAA+AGG	0.525848	4.2:+35432060	MS.gene062979:CDS
GTTTACCTGGTATCATCAGA+AGG	0.541572	4.2:+35432026	MS.gene062979:CDS
TATACTGCAAGATATCCCTT+TGG	0.554191	4.2:-35432076	None:intergenic
AAAGTTGTGGACGTGCCAAA+GGG	0.566864	4.2:+35432061	MS.gene062979:CDS
ATGTTGGAGAAGAAATGAAA+CGG	0.571742	4.2:+35432098	MS.gene062979:CDS
GACATCGTCTTCAAAAGTTG+TGG	0.583482	4.2:+35432048	MS.gene062979:CDS
AAGAAAACGTCTTCTCTGCA+AGG	0.585314	4.2:-35432226	None:intergenic
ATTTGAATATGATCATCCAA+CGG	0.606980	4.2:+35432189	MS.gene062979:CDS
GGAATAGTGAGACCACCCGT+TGG	0.627472	4.2:-35432205	None:intergenic
GATGTCCTTCTGATGATACC+AGG	0.639955	4.2:-35432031	None:intergenic
GAATATGATCATCCAACGGG+TGG	0.646056	4.2:+35432193	MS.gene062979:CDS
AGAATTGTTAAGCCAAGCTG+AGG	0.653696	4.2:+35432162	MS.gene062979:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTTGAATATGATCATCCAA+CGG	+	chr4.2:35432189-35432208	MS.gene062979:CDS	25.0%
	ATGTTGGAGAAGAAATGAAA+CGG	+	chr4.2:35432098-35432117	MS.gene062979:CDS	30.0%
	CTTAACAATTCTTGGAATGA+TGG	-	chr4.2:35432154-35432173	None:intergenic	30.0%
	TTTGAATATGATCATCCAAC+GGG	+	chr4.2:35432190-35432209	MS.gene062979:CDS	30.0%
!	GTTGGTTCAAGTATGATATA+GGG	-	chr4.2:35432132-35432151	None:intergenic	30.0%
	ACAATTCTTGGAATGATGGT+TGG	-	chr4.2:35432150-35432169	None:intergenic	35.0%
	ATTCAAATTGTTCCTCAGCT+TGG	-	chr4.2:35432177-35432196	None:intergenic	35.0%
	GGATATCTTGCAGTATATGT+TGG	+	chr4.2:35432082-35432101	MS.gene062979:CDS	35.0%
	TATACTGCAAGATATCCCTT+TGG	-	chr4.2:35432079-35432098	None:intergenic	35.0%
!	GGTTGGTTCAAGTATGATAT+AGG	-	chr4.2:35432133-35432152	None:intergenic	35.0%
	AAGAAAACGTCTTCTCTGCA+AGG	-	chr4.2:35432229-35432248	None:intergenic	40.0%
	AGAATTGTTAAGCCAAGCTG+AGG	+	chr4.2:35432162-35432181	MS.gene062979:CDS	40.0%
	CAGCTTGGCTTAACAATTCT+TGG	-	chr4.2:35432162-35432181	None:intergenic	40.0%
	GACATCGTCTTCAAAAGTTG+TGG	+	chr4.2:35432048-35432067	MS.gene062979:CDS	40.0%
	GTTTACCTGGTATCATCAGA+AGG	+	chr4.2:35432026-35432045	MS.gene062979:CDS	40.0%
	AAAAGTTGTGGACGTGCCAA+AGG	+	chr4.2:35432060-35432079	MS.gene062979:CDS	45.0%
	AAAGTTGTGGACGTGCCAAA+GGG	+	chr4.2:35432061-35432080	MS.gene062979:CDS	45.0%
	GAATATGATCATCCAACGGG+TGG	+	chr4.2:35432193-35432212	MS.gene062979:CDS	45.0%
	GATGTCCTTCTGATGATACC+AGG	-	chr4.2:35432034-35432053	None:intergenic	45.0%
	GGAATAGTGAGACCACCCGT+TGG	-	chr4.2:35432208-35432227	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35432016	35432273	35432016	ID=MS.gene062979
chr4.2	mRNA	35432016	35432273	35432016	ID=MS.gene062979.t1;Parent=MS.gene062979
chr4.2	exon	35432016	35432273	35432016	ID=MS.gene062979.t1.exon1;Parent=MS.gene062979.t1
chr4.2	CDS	35432016	35432273	35432016	ID=cds.MS.gene062979.t1;Parent=MS.gene062979.t1

Gene Sequence	>MS.gene062979 ATGGGTTTTCGTTTACCTGGTATCATCAGAAGGACATCGTCTTCAAAAGTTGTGGACGTGCCAAAGGGATATCTTGCAGTATATGTTGGAGAAGAAATGAAACGGTTTGTGATCCCTATATCATACTTGAACCAACCATCATTCCAAGAATTGTTAAGCCAAGCTGAGGAACAATTTGAATATGATCATCCAACGGGTGGTCTCACTATTCCTTGCAGAGAAGACGTTTTCTTAGAGATCACTTCTCGTTTGAATTGA
Protein sequence	>MS.gene062979.t1 MGFRLPGIIRRTSSSKVVDVPKGYLAVYVGEEMKRFVIPISYLNQPSFQELLSQAEEQFEYDHPTGGLTIPCREDVFLEITSRLN