AlfalfaGEDB | MS.gene79888

M. sativa cultivar XinJiangDaYe / MS.gene79888

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79888.t1	AES71920.1	98.9	92	1	0	1	92	1	92	4.50E-44	186.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79888.t1	P33083	74.7	91	21	2	1	90	1	90	2.9e-31	135.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79888.t1	G7JAQ3	98.9	92	1	0	1	92	1	92	3.2e-44	186.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049758	MS.gene79888	0.805927	1.05E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene50660	MS.gene79888	PPI
MS.gene057780	MS.gene79888	PPI
MS.gene057788	MS.gene79888	PPI
MS.gene50773	MS.gene79888	PPI
MS.gene057811	MS.gene79888	PPI
MS.gene062954	MS.gene79888	PPI
MS.gene79888	MS.gene062986	PPI
MS.gene50685	MS.gene79888	PPI
MS.gene062962	MS.gene79888	PPI
MS.gene062975	MS.gene79888	PPI
MS.gene50664	MS.gene79888	PPI
MS.gene50689	MS.gene79888	PPI
MS.gene79888	MS.gene062964	PPI
MS.gene003576	MS.gene79888	PPI
MS.gene79888	MS.gene50658	PPI
MS.gene79888	MS.gene50655	PPI
MS.gene79888	MS.gene28863	PPI
MS.gene79888	MS.gene062945	PPI
MS.gene062969	MS.gene79888	PPI
MS.gene057782	MS.gene79888	PPI
MS.gene003606	MS.gene79888	PPI
MS.gene003626	MS.gene79888	PPI
MS.gene003598	MS.gene79888	PPI
MS.gene057791	MS.gene79888	PPI
MS.gene79888	MS.gene50656	PPI
MS.gene062970	MS.gene79888	PPI
MS.gene062967	MS.gene79888	PPI
MS.gene057805	MS.gene79888	PPI
MS.gene062942	MS.gene79888	PPI
MS.gene003605	MS.gene79888	PPI
MS.gene79888	MS.gene50666	PPI
MS.gene79888	MS.gene062985	PPI
MS.gene003629	MS.gene79888	PPI
MS.gene003630	MS.gene79888	PPI
MS.gene003597	MS.gene79888	PPI
MS.gene057804	MS.gene79888	PPI
MS.gene79888	MS.gene062953	PPI
MS.gene062971	MS.gene79888	PPI
MS.gene23373	MS.gene79888	PPI
MS.gene79888	MS.gene003622	PPI
MS.gene062989	MS.gene79888	PPI
MS.gene062987	MS.gene79888	PPI
MS.gene062980	MS.gene79888	PPI
MS.gene70685	MS.gene79888	PPI
MS.gene50657	MS.gene79888	PPI
MS.gene003582	MS.gene79888	PPI
MS.gene79888	MS.gene70684	PPI
MS.gene003584	MS.gene79888	PPI
MS.gene79888	MS.gene062958	PPI
MS.gene50770	MS.gene79888	PPI
MS.gene79888	MS.gene062983	PPI
MS.gene50674	MS.gene79888	PPI
MS.gene79888	MS.gene057777	PPI
MS.gene057817	MS.gene79888	PPI
MS.gene23367	MS.gene79888	PPI
MS.gene062940	MS.gene79888	PPI
MS.gene003612	MS.gene79888	PPI
MS.gene057806	MS.gene79888	PPI
MS.gene70683	MS.gene79888	PPI
MS.gene057809	MS.gene79888	PPI
MS.gene79888	MS.gene003595	PPI
MS.gene062966	MS.gene79888	PPI
MS.gene003613	MS.gene79888	PPI
MS.gene50673	MS.gene79888	PPI
MS.gene057784	MS.gene79888	PPI
MS.gene79888	MS.gene50686	PPI
MS.gene062978	MS.gene79888	PPI
MS.gene79888	MS.gene057785	PPI
MS.gene79888	MS.gene50670	PPI
MS.gene057779	MS.gene79888	PPI
MS.gene50669	MS.gene79888	PPI
MS.gene50668	MS.gene79888	PPI
MS.gene022358	MS.gene79888	PPI
MS.gene003593	MS.gene79888	PPI
MS.gene003579	MS.gene79888	PPI
MS.gene062972	MS.gene79888	PPI
MS.gene79888	MS.gene062941	PPI
MS.gene003610	MS.gene79888	PPI
MS.gene003628	MS.gene79888	PPI
MS.gene003580	MS.gene79888	PPI
MS.gene79888	MS.gene003623	PPI
MS.gene79888	MS.gene057794	PPI
MS.gene057800	MS.gene79888	PPI
MS.gene057816	MS.gene79888	PPI
MS.gene50772	MS.gene79888	PPI
MS.gene057799	MS.gene79888	PPI
MS.gene062965	MS.gene79888	PPI
MS.gene79888	MS.gene057802	PPI
MS.gene057783	MS.gene79888	PPI
MS.gene50688	MS.gene79888	PPI
MS.gene79888	MS.gene50682	PPI
MS.gene50651	MS.gene79888	PPI
MS.gene79888	MS.gene50690	PPI
MS.gene50662	MS.gene79888	PPI
MS.gene50683	MS.gene79888	PPI
MS.gene003599	MS.gene79888	PPI
MS.gene057807	MS.gene79888	PPI
MS.gene003607	MS.gene79888	PPI
MS.gene77525	MS.gene79888	PPI
MS.gene23369	MS.gene79888	PPI
MS.gene003585	MS.gene79888	PPI
MS.gene23368	MS.gene79888	PPI
MS.gene003581	MS.gene79888	PPI
MS.gene057796	MS.gene79888	PPI
MS.gene50653	MS.gene79888	PPI
MS.gene003603	MS.gene79888	PPI
MS.gene062946	MS.gene79888	PPI
MS.gene062959	MS.gene79888	PPI
MS.gene062944	MS.gene79888	PPI
MS.gene79888	MS.gene50771	PPI
MS.gene057798	MS.gene79888	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79888.t1	MTR_3g084170	98.913	92	1	0	1	92	1	92	5.26e-65	191
MS.gene79888.t1	MTR_3g084240	97.826	92	2	0	1	92	1	92	6.50e-64	188
MS.gene79888.t1	MTR_3g084220	94.565	92	5	0	1	92	1	92	1.80e-61	182
MS.gene79888.t1	MTR_3g110038	93.478	92	6	0	1	92	1	92	1.78e-60	179
MS.gene79888.t1	MTR_4g050700	89.247	93	9	1	1	92	1	93	7.88e-58	172
MS.gene79888.t1	MTR_2g012410	89.247	93	9	1	1	92	1	93	7.88e-58	172
MS.gene79888.t1	MTR_3g084150	88.172	93	9	2	1	92	1	92	1.84e-56	169
MS.gene79888.t1	MTR_8g461410	87.097	93	10	2	1	92	1	92	3.81e-56	168
MS.gene79888.t1	MTR_3g084180	87.097	93	10	2	1	92	1	92	1.75e-55	166
MS.gene79888.t1	MTR_3g110032	84.946	93	13	1	1	92	1	93	1.24e-53	162
MS.gene79888.t1	MTR_3g084260	83.871	93	14	1	1	92	1	93	1.06e-52	159
MS.gene79888.t1	MTR_3g110042	86.364	88	10	2	1	87	1	87	1.05e-50	154
MS.gene79888.t1	MTR_4g072250	78.495	93	18	2	1	92	1	92	1.56e-49	151
MS.gene79888.t1	MTR_4g072880	75.269	93	22	1	1	92	1	93	4.71e-49	150
MS.gene79888.t1	MTR_4g072310	75.269	93	22	1	1	92	1	93	1.44e-48	149
MS.gene79888.t1	MTR_3g117630	80.000	90	17	1	4	92	3	92	7.67e-48	147
MS.gene79888.t1	MTR_4g072270	74.194	93	23	1	1	92	1	93	2.42e-47	146
MS.gene79888.t1	MTR_3g084200	94.444	72	4	0	1	72	1	72	1.16e-46	145
MS.gene79888.t1	MTR_4g072230	76.344	93	19	2	1	92	1	91	2.14e-46	144
MS.gene79888.t1	MTR_4g072740	75.556	90	17	1	1	90	1	85	1.47e-45	141
MS.gene79888.t1	MTR_4g072370	75.556	90	20	1	1	90	1	88	1.93e-45	141
MS.gene79888.t1	MTR_4g072860	73.118	93	24	1	1	92	1	93	2.13e-45	141
MS.gene79888.t1	MTR_4g072330	74.444	90	21	1	1	90	1	88	2.95e-45	140
MS.gene79888.t1	MTR_4g072870	71.429	91	25	1	1	90	1	91	7.01e-45	140
MS.gene79888.t1	MTR_4g072470	74.444	90	18	1	1	90	1	85	8.24e-45	139
MS.gene79888.t1	MTR_4g072490	72.222	90	20	1	1	90	1	85	9.61e-45	139
MS.gene79888.t1	MTR_4g072500	74.194	93	22	2	1	92	1	92	1.28e-44	139
MS.gene79888.t1	MTR_4g072240	71.429	91	25	1	1	90	1	91	2.50e-44	138
MS.gene79888.t1	MTR_4g072480	69.565	92	28	0	1	92	1	92	4.27e-44	138
MS.gene79888.t1	MTR_4g072300	71.429	91	25	1	1	90	1	91	7.41e-44	137
MS.gene79888.t1	MTR_3g084250	72.043	93	24	2	1	92	1	92	1.15e-43	137
MS.gene79888.t1	MTR_4g072260	69.892	93	27	1	1	92	1	93	1.18e-43	137
MS.gene79888.t1	MTR_4g072620	68.478	92	29	0	1	92	1	92	1.41e-43	136
MS.gene79888.t1	MTR_4g072890	71.429	91	25	1	1	90	1	91	1.45e-43	136
MS.gene79888.t1	MTR_4g072220	70.968	93	26	1	1	92	1	93	1.77e-43	136
MS.gene79888.t1	MTR_4g072580	72.222	90	20	1	1	90	1	85	2.06e-43	136
MS.gene79888.t1	MTR_4g072830	75.281	89	20	1	1	89	1	87	3.31e-43	135
MS.gene79888.t1	MTR_4g072680	68.478	92	29	0	1	92	1	92	3.43e-43	135
MS.gene79888.t1	MTR_4g072850	73.404	94	23	1	1	92	1	94	3.85e-43	135
MS.gene79888.t1	MTR_4g072570	69.565	92	28	0	1	92	1	92	7.48e-43	134
MS.gene79888.t1	MTR_4g072640	74.725	91	21	2	1	90	1	90	1.17e-42	134
MS.gene79888.t1	MTR_4g072730	68.132	91	29	0	1	91	1	91	1.38e-42	134
MS.gene79888.t1	MTR_4g072630	71.111	90	22	1	1	90	1	86	1.84e-42	133
MS.gene79888.t1	MTR_4g072530	72.527	91	23	2	1	90	1	90	3.13e-42	133
MS.gene79888.t1	MTR_4g072610	73.333	90	18	2	1	90	1	84	4.18e-42	132
MS.gene79888.t1	MTR_4g072465	70.000	90	23	1	1	90	1	86	5.15e-42	132
MS.gene79888.t1	MTR_4g072460	66.304	92	31	0	1	92	1	92	1.56e-41	131
MS.gene79888.t1	MTR_4g072650	73.333	90	18	2	1	90	1	84	3.88e-41	130
MS.gene79888.t1	MTR_3g084210	67.391	92	30	0	1	92	1	92	1.34e-40	129
MS.gene79888.t1	MTR_4g072660	67.391	92	25	1	1	92	1	87	2.26e-40	128
MS.gene79888.t1	MTR_4g072670	70.000	90	23	1	1	90	1	86	6.29e-40	127
MS.gene79888.t1	MTR_4g072540	70.000	90	23	1	1	90	1	86	8.94e-40	127
MS.gene79888.t1	MTR_4g072380	71.111	90	22	1	1	90	1	86	1.10e-39	127
MS.gene79888.t1	MTR_4g072510	70.000	90	23	1	1	90	1	86	3.64e-39	125
MS.gene79888.t1	MTR_4g072820	70.000	90	22	2	1	90	1	85	4.53e-39	125
MS.gene79888.t1	MTR_4g072720	70.000	90	23	1	1	90	1	86	4.84e-39	125
MS.gene79888.t1	MTR_4g072600	70.115	87	21	1	1	87	1	82	5.04e-39	125
MS.gene79888.t1	MTR_3g084190	65.217	92	32	0	1	92	1	92	8.95e-39	124
MS.gene79888.t1	MTR_4g072590	70.000	90	22	1	1	90	1	85	2.78e-38	123
MS.gene79888.t1	MTR_8g461420	65.556	90	31	0	1	90	1	90	2.99e-38	123
MS.gene79888.t1	MTR_4g072940	70.652	92	25	1	3	92	33	124	4.27e-38	124
MS.gene79888.t1	MTR_5g008360	77.027	74	17	0	19	92	10	83	4.34e-38	122
MS.gene79888.t1	MTR_3g084230	65.556	90	31	0	1	90	1	90	9.15e-38	122
MS.gene79888.t1	MTR_3g084160	64.130	92	33	0	1	92	1	92	2.27e-37	121
MS.gene79888.t1	MTR_5g008370	67.021	94	25	2	1	91	1	91	2.52e-37	122
MS.gene79888.t1	MTR_8g461400	68.478	92	3	1	1	92	1	66	2.61e-37	120
MS.gene79888.t1	MTR_3g110045	66.667	90	30	0	3	92	62	151	7.14e-37	121
MS.gene79888.t1	MTR_4g072690	68.889	90	23	1	1	90	1	85	3.24e-36	117
MS.gene79888.t1	MTR_4g072550	63.043	92	31	1	4	92	12	103	1.47e-35	117
MS.gene79888.t1	MTR_5g008350	68.354	79	20	1	1	79	1	74	1.80e-35	115
MS.gene79888.t1	MTR_4g072450	67.778	90	24	1	1	90	1	85	2.12e-35	115
MS.gene79888.t1	MTR_4g072980	57.895	95	37	2	1	92	1	95	2.70e-34	113
MS.gene79888.t1	MTR_4g072560	54.082	98	37	3	1	90	1	98	4.84e-32	107
MS.gene79888.t1	MTR_4g072770	74.242	66	17	0	25	90	15	80	1.17e-31	106
MS.gene79888.t1	MTR_4g072290	59.783	92	24	2	1	92	1	79	5.28e-31	104
MS.gene79888.t1	MTR_4g072910	66.197	71	24	0	20	90	30	100	1.99e-30	103
MS.gene79888.t1	MTR_3g117640	50.495	101	40	2	1	91	1	101	6.84e-30	102
MS.gene79888.t1	MTR_3g110035	68.182	66	21	0	27	92	73	138	2.53e-28	99.8
MS.gene79888.t1	MTR_4g072280	64.000	75	26	1	1	74	1	75	1.02e-26	94.0
MS.gene79888.t1	MTR_4g072750	66.216	74	21	2	1	71	1	73	8.78e-26	91.7
MS.gene79888.t1	MTR_4g072930	50.588	85	37	2	11	90	26	110	1.49e-24	89.4
MS.gene79888.t1	MTR_3g113310	60.000	65	25	1	23	87	40	103	2.03e-24	89.0
MS.gene79888.t1	MTR_3g117610	61.538	65	24	1	23	87	43	106	1.52e-23	86.7
MS.gene79888.t1	MTR_6g077850	55.224	67	30	0	24	90	33	99	3.91e-23	85.5
MS.gene79888.t1	MTR_4g072190	50.602	83	39	2	5	87	17	97	6.68e-23	84.7
MS.gene79888.t1	MTR_4g072840	54.023	87	10	4	1	87	1	57	2.47e-20	77.0
MS.gene79888.t1	MTR_2g043960	56.452	62	26	1	24	85	75	135	1.33e-19	78.2
MS.gene79888.t1	MTR_8g076040	54.688	64	28	1	24	87	40	102	1.85e-19	76.3
MS.gene79888.t1	MTR_5g021820	54.688	64	28	1	24	87	39	101	1.88e-19	76.3
MS.gene79888.t1	MTR_4g124750	54.688	64	28	1	24	87	68	130	3.88e-19	76.6
MS.gene79888.t1	MTR_1g094750	49.412	85	38	2	5	85	26	109	2.49e-18	73.6
MS.gene79888.t1	MTR_1g009150	58.065	62	25	1	24	85	70	130	5.14e-18	74.3
MS.gene79888.t1	MTR_4g005310	46.053	76	40	1	11	85	48	123	4.51e-17	71.2
MS.gene79888.t1	MTR_3g109160	53.731	67	30	1	25	91	69	134	7.48e-16	68.6
MS.gene79888.t1	MTR_4g005320	52.459	61	28	1	25	85	70	129	8.16e-16	68.6
MS.gene79888.t1	MTR_8g461210	48.571	70	33	2	24	91	34	102	1.11e-14	64.3
MS.gene79888.t1	MTR_1g024085	52.542	59	27	1	24	82	36	93	1.19e-14	65.1
MS.gene79888.t1	MTR_3g098970	35.000	80	51	1	13	92	41	119	1.59e-14	64.7
MS.gene79888.t1	MTR_7g118010	50.794	63	28	2	25	85	23	84	2.01e-14	63.2
MS.gene79888.t1	MTR_4g072160	52.381	63	27	2	24	85	36	96	2.73e-14	63.9
MS.gene79888.t1	MTR_3g105900	70.732	41	12	0	24	64	1171	1211	4.05e-14	66.2
MS.gene79888.t1	MTR_0388s0020	40.000	80	44	2	11	87	61	139	4.44e-14	63.5
MS.gene79888.t1	MTR_3g092220	44.928	69	35	2	16	82	24	91	6.31e-14	62.4
MS.gene79888.t1	MTR_4g025830	44.118	68	34	2	25	89	79	145	1.09e-13	62.8
MS.gene79888.t1	MTR_7g405740	49.180	61	30	1	25	85	67	126	1.36e-13	62.4
MS.gene79888.t1	MTR_7g101740	48.438	64	32	1	24	87	39	101	2.10e-13	60.8
MS.gene79888.t1	MTR_1g061570	47.059	68	35	1	24	91	18	84	2.38e-13	61.2
MS.gene79888.t1	MTR_4g021810	45.570	79	39	3	5	82	8	83	3.05e-13	60.5
MS.gene79888.t1	MTR_3g097120	41.975	81	38	2	18	90	2	81	3.93e-13	60.1
MS.gene79888.t1	MTR_8g026730	46.032	63	31	2	25	85	27	88	5.11e-13	59.7
MS.gene79888.t1	MTR_1g063950	40.000	80	45	2	8	85	29	107	1.01e-12	59.3
MS.gene79888.t1	MTR_1g059770	39.189	74	38	2	14	87	44	110	1.01e-11	57.0
MS.gene79888.t1	MTR_8g101520	37.500	88	49	2	8	90	28	114	1.24e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79888.t1	AT4G38840	75.000	68	16	1	24	90	32	99	1.06e-35	117
MS.gene79888.t1	AT5G18020	65.789	76	25	1	16	90	15	90	3.00e-33	110
MS.gene79888.t1	AT5G18050	64.474	76	26	1	16	90	15	90	2.17e-32	108
MS.gene79888.t1	AT5G18060	71.212	66	18	1	26	90	25	90	4.99e-32	107
MS.gene79888.t1	AT5G18080	70.149	67	19	1	25	90	24	90	6.70e-32	107
MS.gene79888.t1	AT2G21200	66.667	72	23	1	19	89	15	86	3.57e-31	105
MS.gene79888.t1	AT5G18030	68.657	67	20	1	25	90	22	88	3.58e-31	105
MS.gene79888.t1	AT4G38825	63.889	72	25	1	20	90	18	89	1.50e-30	103
MS.gene79888.t1	AT2G21210	58.974	78	30	1	15	90	18	95	1.55e-30	103
MS.gene79888.t1	AT5G18010	67.164	67	21	1	25	90	24	90	6.68e-30	102
MS.gene79888.t1	AT4G34770	66.667	75	23	1	19	91	29	103	9.73e-30	102
MS.gene79888.t1	AT2G21210	58.974	78	30	1	15	90	85	162	1.17e-29	103
MS.gene79888.t1	AT3G03840	63.014	73	25	1	21	91	23	95	4.16e-29	100
MS.gene79888.t1	AT3G03820	55.682	88	36	1	7	91	9	96	1.20e-28	99.4
MS.gene79888.t1	AT3G03850	66.176	68	21	1	26	91	26	93	3.87e-28	97.8
MS.gene79888.t1	AT4G34800	52.174	92	37	2	1	89	1	88	4.44e-28	97.8
MS.gene79888.t1	AT4G38850	57.831	83	23	2	9	88	14	87	5.92e-28	97.4
MS.gene79888.t1	AT4G34810	63.235	68	21	1	24	87	47	114	1.38e-27	97.1
MS.gene79888.t1	AT3G03830	51.648	91	36	2	8	90	2	92	1.64e-26	93.6
MS.gene79888.t1	AT4G13790	52.439	82	32	2	9	88	14	90	2.54e-25	90.9
MS.gene79888.t1	AT4G34780	57.143	77	30	1	17	90	20	96	2.90e-25	90.9
MS.gene79888.t1	AT4G34790	61.538	65	23	1	25	87	39	103	8.68e-24	87.4
MS.gene79888.t1	AT4G38860	60.000	65	26	0	23	87	38	102	9.12e-24	87.0
MS.gene79888.t1	AT1G75580	55.405	74	32	1	14	87	33	105	4.77e-23	85.5
MS.gene79888.t1	AT4G34760	58.462	65	26	1	23	87	41	104	8.56e-22	82.0
MS.gene79888.t1	AT2G21220	55.385	65	28	1	23	87	38	101	3.41e-21	80.5
MS.gene79888.t1	AT4G36110	54.545	66	29	1	24	89	39	103	2.38e-20	78.6
MS.gene79888.t1	AT3G43120	54.839	62	27	1	24	85	78	138	6.25e-20	79.0
MS.gene79888.t1	AT2G16580	55.385	65	28	1	23	87	42	105	6.45e-20	77.4
MS.gene79888.t1	AT2G18010	53.030	66	30	1	24	89	47	111	2.40e-19	76.3
MS.gene79888.t1	AT3G20220	54.545	66	28	2	25	89	47	111	3.15e-19	75.9
MS.gene79888.t1	AT5G20810	56.452	62	26	1	24	85	78	138	4.47e-19	77.0
MS.gene79888.t1	AT1G19830	60.000	60	23	1	23	82	46	104	6.94e-19	75.1
MS.gene79888.t1	AT5G20810	56.452	62	26	1	24	85	78	138	8.77e-19	76.6
MS.gene79888.t1	AT5G10990	48.611	72	36	1	11	82	27	97	1.68e-16	69.7
MS.gene79888.t1	AT1G75590	48.810	84	37	3	4	82	16	98	2.88e-16	69.3
MS.gene79888.t1	AT5G66260	43.820	89	46	2	5	90	11	98	4.18e-16	67.4
MS.gene79888.t1	AT4G34750	41.026	78	45	1	10	87	22	98	5.62e-16	68.6
MS.gene79888.t1	AT4G34750	41.026	78	45	1	10	87	22	98	5.62e-16	68.6
MS.gene79888.t1	AT1G19840	46.988	83	39	2	4	82	16	97	1.77e-15	67.4
MS.gene79888.t1	AT4G31320	54.098	61	27	1	25	85	80	139	4.30e-15	67.0
MS.gene79888.t1	AT2G24400	54.688	64	28	1	22	85	61	123	4.72e-15	66.6
MS.gene79888.t1	AT2G46690	41.026	78	42	2	17	91	16	92	5.25e-15	65.5
MS.gene79888.t1	AT3G51200	50.820	61	28	2	24	83	38	97	3.92e-14	62.8
MS.gene79888.t1	AT3G61900	39.286	84	47	2	10	90	15	97	4.45e-14	63.2
MS.gene79888.t1	AT2G37030	41.026	78	43	2	11	86	33	109	8.66e-14	62.4
MS.gene79888.t1	AT3G12830	38.667	75	45	1	11	85	36	109	1.81e-12	58.9
MS.gene79888.t1	AT4G00880	50.000	64	29	2	24	85	27	89	2.51e-12	58.5
MS.gene79888.t1	AT4G09530	43.836	73	32	3	13	82	22	88	6.01e-12	57.0
MS.gene79888.t1	AT5G53590	42.029	69	34	2	24	87	45	112	8.96e-12	57.4
MS.gene79888.t1	AT3G03847	42.353	85	45	4	3	85	48	130	1.18e-11	57.0
MS.gene79888.t1	AT1G56150	45.902	61	32	1	25	85	38	97	1.38e-11	56.2
MS.gene79888.t1	AT1G16510	38.750	80	46	2	14	91	43	121	3.43e-11	56.2

Find 25 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTCAATACTTTCGATGTT+TGG	0.306604	3.1:-65470366	None:intergenic
CATATTACTTCTCGCTTCAA+TGG	0.344439	3.1:+65470565	MS.gene79888:CDS
GTCTAATAGCAGCAGGTAAA+CGG	0.414146	3.1:-65470324	None:intergenic
AGTCAAGCCGAGGAAGAATT+CGG	0.460318	3.1:+65470487	MS.gene79888:CDS
ATATTACTTCTCGCTTCAAT+GGG	0.480545	3.1:+65470566	MS.gene79888:CDS
GTTTACCTGCTGCTATTAGA+CGG	0.483432	3.1:+65470326	MS.gene79888:CDS
TTTACCTGCTGCTATTAGAC+GGG	0.491252	3.1:+65470327	MS.gene79888:CDS
GTCATATCCGAATTCTTCCT+CGG	0.504640	3.1:-65470494	None:intergenic
GGAATTGTGAGGCCGCCCAT+TGG	0.522416	3.1:-65470520	None:intergenic
TTCGGATATGACCATCCAAT+GGG	0.541939	3.1:+65470505	MS.gene79888:CDS
TTGTGAGGCCGCCCATTGGA+TGG	0.552821	3.1:-65470516	None:intergenic
GGCTATCTTGCAGTGTACGT+TGG	0.552838	3.1:+65470397	MS.gene79888:CDS
TACACTGCAAGATAGCCCTT+TGG	0.556003	3.1:-65470391	None:intergenic
AAAGTATTGAATGTGCCAAA+GGG	0.569914	3.1:+65470376	MS.gene79888:CDS
GAAAGTATTGAATGTGCCAA+AGG	0.571367	3.1:+65470375	MS.gene79888:CDS
GAAGCCCGTCTAATAGCAGC+AGG	0.573365	3.1:-65470331	None:intergenic
AAGAAAACGTCTTCTGTGCA+AGG	0.577878	3.1:-65470541	None:intergenic
ATTCGGATATGACCATCCAA+TGG	0.589403	3.1:+65470504	MS.gene79888:CDS
AAACTTGTTGAGTCAAGCCG+AGG	0.626433	3.1:+65470477	MS.gene79888:CDS
GCTTGGTTCAAGTATGACGT+GGG	0.632091	3.1:-65470445	None:intergenic
AGCTTGGTTCAAGTATGACG+TGG	0.646004	3.1:-65470446	None:intergenic
GGATATGACCATCCAATGGG+CGG	0.678665	3.1:+65470508	MS.gene79888:CDS
CTTGGTTCAAGTATGACGTG+GGG	0.704961	3.1:-65470444	None:intergenic
ACGTTGGAGAGCAAATGAAG+CGG	0.725765	3.1:+65470413	MS.gene79888:CDS
CTTCTGTGCAAGGAATTGTG+AGG	0.726703	3.1:-65470531	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATATTACTTCTCGCTTCAAT+GGG	+	chr3.1:65470566-65470585	MS.gene79888:CDS	30.0%
	CATTCAATACTTTCGATGTT+TGG	-	chr3.1:65470369-65470388	None:intergenic	30.0%
!!	AAAGTATTGAATGTGCCAAA+GGG	+	chr3.1:65470376-65470395	MS.gene79888:CDS	30.0%
!!!	ACAAGTTTTGAAATGAAGCT+TGG	-	chr3.1:65470465-65470484	None:intergenic	30.0%
	CATATTACTTCTCGCTTCAA+TGG	+	chr3.1:65470565-65470584	MS.gene79888:CDS	35.0%
!!	GAAAGTATTGAATGTGCCAA+AGG	+	chr3.1:65470375-65470394	MS.gene79888:CDS	35.0%
	AAGAAAACGTCTTCTGTGCA+AGG	-	chr3.1:65470544-65470563	None:intergenic	40.0%
	ATTCGGATATGACCATCCAA+TGG	+	chr3.1:65470504-65470523	MS.gene79888:CDS	40.0%
	GTCATATCCGAATTCTTCCT+CGG	-	chr3.1:65470497-65470516	None:intergenic	40.0%
	GTCTAATAGCAGCAGGTAAA+CGG	-	chr3.1:65470327-65470346	None:intergenic	40.0%
	GTTTACCTGCTGCTATTAGA+CGG	+	chr3.1:65470326-65470345	MS.gene79888:CDS	40.0%
	TTCGGATATGACCATCCAAT+GGG	+	chr3.1:65470505-65470524	MS.gene79888:CDS	40.0%
	TTTACCTGCTGCTATTAGAC+GGG	+	chr3.1:65470327-65470346	MS.gene79888:CDS	40.0%
	ACGTTGGAGAGCAAATGAAG+CGG	+	chr3.1:65470413-65470432	MS.gene79888:CDS	45.0%
	AGCTTGGTTCAAGTATGACG+TGG	-	chr3.1:65470449-65470468	None:intergenic	45.0%
	AGTCAAGCCGAGGAAGAATT+CGG	+	chr3.1:65470487-65470506	MS.gene79888:CDS	45.0%
	CTTCTGTGCAAGGAATTGTG+AGG	-	chr3.1:65470534-65470553	None:intergenic	45.0%
	CTTGGTTCAAGTATGACGTG+GGG	-	chr3.1:65470447-65470466	None:intergenic	45.0%
	GCTTGGTTCAAGTATGACGT+GGG	-	chr3.1:65470448-65470467	None:intergenic	45.0%
	TACACTGCAAGATAGCCCTT+TGG	-	chr3.1:65470394-65470413	None:intergenic	45.0%
!!	AAACTTGTTGAGTCAAGCCG+AGG	+	chr3.1:65470477-65470496	MS.gene79888:CDS	45.0%
	GGATATGACCATCCAATGGG+CGG	+	chr3.1:65470508-65470527	MS.gene79888:CDS	50.0%
	GGCTATCTTGCAGTGTACGT+TGG	+	chr3.1:65470397-65470416	MS.gene79888:CDS	50.0%
	GAAGCCCGTCTAATAGCAGC+AGG	-	chr3.1:65470334-65470353	None:intergenic	55.0%
	GGAATTGTGAGGCCGCCCAT+TGG	-	chr3.1:65470523-65470542	None:intergenic	60.0%
	TTGTGAGGCCGCCCATTGGA+TGG	-	chr3.1:65470519-65470538	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	65470316	65470594	65470316	ID=MS.gene79888
chr3.1	mRNA	65470316	65470594	65470316	ID=MS.gene79888.t1;Parent=MS.gene79888
chr3.1	exon	65470316	65470594	65470316	ID=MS.gene79888.t1.exon1;Parent=MS.gene79888.t1
chr3.1	CDS	65470316	65470594	65470316	ID=cds.MS.gene79888.t1;Parent=MS.gene79888.t1

Gene Sequence	>MS.gene79888 ATGGGTTTCCGTTTACCTGCTGCTATTAGACGGGCTTCATTCAGCAGTAGCCAAACATCGAAAGTATTGAATGTGCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCACGTCATACTTGAACCAAGCTTCATTTCAAAACTTGTTGAGTCAAGCCGAGGAAGAATTCGGATATGACCATCCAATGGGCGGCCTCACAATTCCTTGCACAGAAGACGTTTTCTTGCATATTACTTCTCGCTTCAATGGGCTATAA
Protein sequence	>MS.gene79888.t1 MGFRLPAAIRRASFSSSQTSKVLNVPKGYLAVYVGEQMKRFVIPTSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFLHITSRFNGL