AlfalfaGEDB | MS.gene057790

M. sativa cultivar XinJiangDaYe / MS.gene057790

KEGG: -
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057790.t1	XP_003607146.1	93	86	5	1	1	86	1	85	4.20E-36	160.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057790.t1	P33080	67.8	90	25	1	1	86	1	90	3.3e-29	128.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057790.t1	G7JMA0	93.0	86	5	1	1	86	1	85	3.0e-36	160.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062975	MS.gene057790	PPI
MS.gene057790	MS.gene057802	PPI
MS.gene057790	MS.gene50773	PPI
MS.gene50689	MS.gene057790	PPI
MS.gene057790	MS.gene057796	PPI
MS.gene057790	MS.gene50682	PPI
MS.gene003576	MS.gene057790	PPI
MS.gene057790	MS.gene50653	PPI
MS.gene057790	MS.gene003597	PPI
MS.gene057790	MS.gene003598	PPI
MS.gene057790	MS.gene50690	PPI
MS.gene057790	MS.gene057806	PPI
MS.gene057790	MS.gene057780	PPI
MS.gene057790	MS.gene057788	PPI
MS.gene057790	MS.gene062944	PPI
MS.gene057790	MS.gene50655	PPI
MS.gene057790	MS.gene50685	PPI
MS.gene057790	MS.gene003613	PPI
MS.gene057790	MS.gene003584	PPI
MS.gene062970	MS.gene057790	PPI
MS.gene057790	MS.gene057791	PPI
MS.gene057790	MS.gene50674	PPI
MS.gene062942	MS.gene057790	PPI
MS.gene057790	MS.gene057782	PPI
MS.gene057790	MS.gene057779	PPI
MS.gene057790	MS.gene50673	PPI
MS.gene062972	MS.gene057790	PPI
MS.gene057790	MS.gene062965	PPI
MS.gene057790	MS.gene50771	PPI
MS.gene057790	MS.gene022358	PPI
MS.gene057790	MS.gene062953	PPI
MS.gene003582	MS.gene057790	PPI
MS.gene057790	MS.gene062954	PPI
MS.gene057790	MS.gene062986	PPI
MS.gene057790	MS.gene057783	PPI
MS.gene057790	MS.gene50770	PPI
MS.gene057790	MS.gene062987	PPI
MS.gene057790	MS.gene057811	PPI
MS.gene057790	MS.gene057817	PPI
MS.gene50772	MS.gene057790	PPI
MS.gene057790	MS.gene062964	PPI
MS.gene057809	MS.gene057790	PPI
MS.gene057790	MS.gene77525	PPI
MS.gene057790	MS.gene50658	PPI
MS.gene057790	MS.gene057777	PPI
MS.gene057790	MS.gene28863	PPI
MS.gene057790	MS.gene062945	PPI
MS.gene062978	MS.gene057790	PPI
MS.gene057790	MS.gene057804	PPI
MS.gene057790	MS.gene50651	PPI
MS.gene057790	MS.gene003607	PPI
MS.gene057790	MS.gene50656	PPI
MS.gene057790	MS.gene062969	PPI
MS.gene003593	MS.gene057790	PPI
MS.gene057790	MS.gene50686	PPI
MS.gene057790	MS.gene70683	PPI
MS.gene057790	MS.gene062962	PPI
MS.gene057790	MS.gene50666	PPI
MS.gene057790	MS.gene062985	PPI
MS.gene057790	MS.gene057784	PPI
MS.gene003580	MS.gene057790	PPI
MS.gene057790	MS.gene50669	PPI
MS.gene057790	MS.gene003622	PPI
MS.gene057790	MS.gene003599	PPI
MS.gene057790	MS.gene23368	PPI
MS.gene057790	MS.gene003585	PPI
MS.gene057790	MS.gene003623	PPI
MS.gene057816	MS.gene057790	PPI
MS.gene057790	MS.gene50668	PPI
MS.gene057790	MS.gene003581	PPI
MS.gene057790	MS.gene70684	PPI
MS.gene057790	MS.gene062958	PPI
MS.gene057790	MS.gene003628	PPI
MS.gene057790	MS.gene057798	PPI
MS.gene057790	MS.gene003612	PPI
MS.gene057790	MS.gene003629	PPI
MS.gene057790	MS.gene062983	PPI
MS.gene057790	MS.gene062967	PPI
MS.gene057790	MS.gene003579	PPI
MS.gene057790	MS.gene062940	PPI
MS.gene50657	MS.gene057790	PPI
MS.gene057790	MS.gene062989	PPI
MS.gene057790	MS.gene003595	PPI
MS.gene057790	MS.gene062959	PPI
MS.gene057790	MS.gene003606	PPI
MS.gene057790	MS.gene50664	PPI
MS.gene057790	MS.gene057785	PPI
MS.gene50683	MS.gene057790	PPI
MS.gene057790	MS.gene50670	PPI
MS.gene057807	MS.gene057790	PPI
MS.gene057790	MS.gene057800	PPI
MS.gene057790	MS.gene70685	PPI
MS.gene057790	MS.gene062941	PPI
MS.gene003626	MS.gene057790	PPI
MS.gene057790	MS.gene50662	PPI
MS.gene057790	MS.gene50660	PPI
MS.gene062946	MS.gene057790	PPI
MS.gene057805	MS.gene057790	PPI
MS.gene057790	MS.gene057799	PPI
MS.gene003605	MS.gene057790	PPI
MS.gene057790	MS.gene057794	PPI
MS.gene057790	MS.gene50688	PPI
MS.gene057790	MS.gene003603	PPI
MS.gene057790	MS.gene003630	PPI
MS.gene057790	MS.gene062966	PPI
MS.gene057790	MS.gene23369	PPI
MS.gene062971	MS.gene057790	PPI
MS.gene23373	MS.gene057790	PPI
MS.gene057790	MS.gene062980	PPI
MS.gene057790	MS.gene23367	PPI
MS.gene057790	MS.gene003610	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057790.t1	MTR_4g072740	93.023	86	5	1	1	86	1	85	1.74e-54	163
MS.gene057790.t1	MTR_4g072490	87.209	86	10	1	1	86	1	85	5.85e-52	157
MS.gene057790.t1	MTR_4g072630	83.721	86	14	0	1	86	1	86	2.46e-51	155
MS.gene057790.t1	MTR_4g072465	81.395	86	16	0	1	86	1	86	3.39e-50	152
MS.gene057790.t1	MTR_4g072470	83.721	86	13	1	1	86	1	85	7.12e-49	149
MS.gene057790.t1	MTR_4g072580	80.233	86	16	1	1	86	1	85	5.17e-47	145
MS.gene057790.t1	MTR_4g072370	79.545	88	16	1	1	86	1	88	5.35e-47	145
MS.gene057790.t1	MTR_4g072670	88.372	86	10	0	1	86	1	86	1.17e-46	144
MS.gene057790.t1	MTR_4g072830	80.460	87	15	1	1	85	1	87	3.82e-46	142
MS.gene057790.t1	MTR_3g084150	75.556	90	18	1	1	86	1	90	6.36e-46	142
MS.gene057790.t1	MTR_4g072330	76.404	89	17	2	1	86	1	88	2.41e-45	140
MS.gene057790.t1	MTR_4g072720	87.209	86	11	0	1	86	1	86	3.59e-45	140
MS.gene057790.t1	MTR_3g084180	74.444	90	19	1	1	86	1	90	3.89e-45	140
MS.gene057790.t1	MTR_4g072540	86.047	86	12	0	1	86	1	86	4.05e-45	140
MS.gene057790.t1	MTR_4g072510	86.047	86	12	0	1	86	1	86	6.56e-45	139
MS.gene057790.t1	MTR_4g072600	77.907	86	18	1	1	86	1	85	8.06e-45	139
MS.gene057790.t1	MTR_8g461410	73.333	90	20	1	1	86	1	90	9.25e-45	139
MS.gene057790.t1	MTR_3g084170	73.333	90	20	1	1	86	1	90	2.62e-44	138
MS.gene057790.t1	MTR_4g072610	76.744	86	18	1	1	86	1	84	2.93e-43	135
MS.gene057790.t1	MTR_3g084240	72.222	90	21	1	1	86	1	90	3.65e-43	135
MS.gene057790.t1	MTR_3g110038	71.111	90	22	1	1	86	1	90	4.97e-43	135
MS.gene057790.t1	MTR_4g072650	75.581	86	19	1	1	86	1	84	1.85e-42	133
MS.gene057790.t1	MTR_3g084220	70.000	90	23	1	1	86	1	90	6.33e-42	132
MS.gene057790.t1	MTR_4g050700	70.330	91	22	1	1	86	1	91	7.95e-42	132
MS.gene057790.t1	MTR_2g012410	70.330	91	22	1	1	86	1	91	7.95e-42	132
MS.gene057790.t1	MTR_3g110032	69.231	91	23	1	1	86	1	91	1.27e-41	131
MS.gene057790.t1	MTR_4g072250	73.626	91	18	2	1	86	1	90	3.51e-41	130
MS.gene057790.t1	MTR_4g072310	69.231	91	23	1	1	86	1	91	4.75e-41	130
MS.gene057790.t1	MTR_4g072870	70.652	92	20	2	1	86	1	91	5.64e-41	129
MS.gene057790.t1	MTR_4g072590	80.233	86	16	1	1	86	1	85	6.36e-41	129
MS.gene057790.t1	MTR_4g072880	69.231	91	23	1	1	86	1	91	9.70e-41	129
MS.gene057790.t1	MTR_4g072570	68.889	90	24	1	1	86	1	90	1.76e-40	128
MS.gene057790.t1	MTR_3g084260	68.132	91	24	1	1	86	1	91	2.00e-40	128
MS.gene057790.t1	MTR_4g072480	68.889	90	24	1	1	86	1	90	2.34e-40	128
MS.gene057790.t1	MTR_4g072380	75.862	87	19	2	1	86	1	86	5.25e-40	127
MS.gene057790.t1	MTR_5g008350	80.000	75	14	1	1	75	1	74	6.37e-40	126
MS.gene057790.t1	MTR_4g072850	70.652	92	21	1	1	86	1	92	7.68e-40	127
MS.gene057790.t1	MTR_3g084250	70.000	90	23	1	1	86	1	90	9.85e-40	126
MS.gene057790.t1	MTR_4g072300	67.033	91	25	1	1	86	1	91	1.30e-39	126
MS.gene057790.t1	MTR_4g072820	73.563	87	20	2	1	86	1	85	1.56e-39	126
MS.gene057790.t1	MTR_3g110042	69.663	89	23	1	1	85	1	89	1.92e-39	126
MS.gene057790.t1	MTR_4g072240	65.934	91	26	1	1	86	1	91	2.74e-39	125
MS.gene057790.t1	MTR_4g072690	77.907	86	18	1	1	86	1	85	3.41e-39	125
MS.gene057790.t1	MTR_4g072620	65.556	90	27	1	1	86	1	90	5.76e-39	124
MS.gene057790.t1	MTR_4g072450	77.907	86	18	1	1	86	1	85	1.09e-38	124
MS.gene057790.t1	MTR_4g072860	70.652	92	20	2	1	86	1	91	1.10e-38	124
MS.gene057790.t1	MTR_4g072680	66.667	90	26	1	1	86	1	90	1.16e-38	124
MS.gene057790.t1	MTR_4g072270	67.033	91	25	1	1	86	1	91	1.22e-38	124
MS.gene057790.t1	MTR_4g072220	64.835	91	27	1	1	86	1	91	5.87e-38	122
MS.gene057790.t1	MTR_4g072890	64.835	91	27	1	1	86	1	91	6.82e-38	122
MS.gene057790.t1	MTR_4g072260	63.736	91	28	1	1	86	1	91	9.51e-38	121
MS.gene057790.t1	MTR_3g117630	76.712	73	17	0	14	86	18	90	9.65e-38	121
MS.gene057790.t1	MTR_4g072660	66.279	86	28	1	1	86	1	85	1.03e-37	121
MS.gene057790.t1	MTR_4g072730	64.444	90	28	1	1	86	1	90	1.08e-37	121
MS.gene057790.t1	MTR_4g072460	64.444	90	28	1	1	86	1	90	2.48e-37	120
MS.gene057790.t1	MTR_4g072230	68.132	91	22	2	1	86	1	89	3.20e-37	120
MS.gene057790.t1	MTR_4g072500	65.556	90	27	1	1	86	1	90	3.60e-37	120
MS.gene057790.t1	MTR_3g084210	65.556	90	27	1	1	86	1	90	1.63e-36	118
MS.gene057790.t1	MTR_3g084190	67.778	90	25	1	1	86	1	90	2.77e-36	118
MS.gene057790.t1	MTR_4g072640	64.835	91	26	2	1	86	1	90	3.80e-36	117
MS.gene057790.t1	MTR_8g461420	66.667	90	26	1	1	86	1	90	5.06e-36	117
MS.gene057790.t1	MTR_4g072530	63.333	90	29	1	1	86	1	90	6.63e-36	117
MS.gene057790.t1	MTR_3g084230	65.556	90	27	1	1	86	1	90	2.01e-35	115
MS.gene057790.t1	MTR_3g084160	66.667	90	26	1	1	86	1	90	6.23e-35	114
MS.gene057790.t1	MTR_4g072940	66.667	90	24	1	3	86	33	122	9.08e-35	115
MS.gene057790.t1	MTR_5g008370	63.333	90	29	1	1	86	1	90	3.46e-34	114
MS.gene057790.t1	MTR_3g110045	67.045	88	25	1	3	86	62	149	4.48e-34	114
MS.gene057790.t1	MTR_5g008360	66.667	78	26	0	9	86	4	81	8.51e-34	111
MS.gene057790.t1	MTR_3g084200	69.444	72	18	1	1	68	1	72	1.89e-31	106
MS.gene057790.t1	MTR_4g072770	59.302	86	29	1	1	86	1	80	8.69e-30	101
MS.gene057790.t1	MTR_4g072980	53.261	92	36	2	1	85	1	92	9.18e-30	101
MS.gene057790.t1	MTR_4g072560	49.485	97	37	3	1	85	1	97	1.65e-29	101
MS.gene057790.t1	MTR_4g072550	64.789	71	25	0	16	86	31	101	3.37e-29	100
MS.gene057790.t1	MTR_4g072910	59.740	77	30	1	10	86	25	100	8.14e-28	97.1
MS.gene057790.t1	MTR_3g117640	47.000	100	39	2	1	86	1	100	3.92e-27	95.5
MS.gene057790.t1	MTR_3g110035	65.625	64	22	0	23	86	73	136	1.82e-25	92.0
MS.gene057790.t1	MTR_4g072290	55.814	86	29	2	1	86	1	77	1.30e-24	88.2
MS.gene057790.t1	MTR_4g072280	57.333	75	27	1	1	70	1	75	7.27e-24	86.3
MS.gene057790.t1	MTR_4g072750	61.644	73	22	2	1	67	1	73	1.61e-23	85.5
MS.gene057790.t1	MTR_6g077850	53.731	67	31	0	20	86	33	99	3.26e-22	82.8
MS.gene057790.t1	MTR_3g113310	52.239	67	31	1	19	85	40	105	5.93e-21	79.7
MS.gene057790.t1	MTR_3g117610	55.385	65	28	1	19	83	43	106	9.69e-21	79.3
MS.gene057790.t1	MTR_4g072190	48.000	75	38	1	11	85	26	99	3.20e-20	77.8
MS.gene057790.t1	MTR_4g072930	48.148	81	37	2	11	86	30	110	3.26e-20	78.2
MS.gene057790.t1	MTR_4g072840	51.724	87	14	3	1	86	1	60	6.80e-20	75.9
MS.gene057790.t1	MTR_8g461400	46.667	90	18	2	1	86	1	64	1.32e-19	75.1
MS.gene057790.t1	MTR_2g043960	54.237	59	26	1	20	78	75	132	2.91e-17	72.0
MS.gene057790.t1	MTR_5g021820	48.485	66	33	1	20	85	39	103	5.52e-17	69.7
MS.gene057790.t1	MTR_8g076040	50.000	64	31	1	20	83	40	102	1.48e-16	68.6
MS.gene057790.t1	MTR_4g124750	52.542	59	27	1	20	78	68	125	1.76e-16	69.7
MS.gene057790.t1	MTR_1g094750	53.226	62	28	1	20	81	49	109	9.04e-16	67.0
MS.gene057790.t1	MTR_1g009150	50.000	68	33	1	14	81	64	130	3.68e-15	66.6
MS.gene057790.t1	MTR_3g105900	69.048	42	13	0	20	61	1171	1212	4.84e-15	68.6
MS.gene057790.t1	MTR_1g061570	45.570	79	40	2	5	81	1	78	9.03e-15	64.3
MS.gene057790.t1	MTR_7g101740	52.308	65	28	2	20	83	39	101	1.04e-14	63.9
MS.gene057790.t1	MTR_4g005310	45.455	66	35	1	17	81	58	123	1.07e-14	65.1
MS.gene057790.t1	MTR_1g063950	47.826	69	33	2	14	81	41	107	1.82e-14	63.5
MS.gene057790.t1	MTR_7g118010	47.059	68	33	2	21	86	23	89	8.91e-14	61.6
MS.gene057790.t1	MTR_1g024085	46.575	73	36	2	10	80	24	95	1.16e-13	62.0
MS.gene057790.t1	MTR_3g092220	40.260	77	43	2	12	86	24	99	1.21e-13	61.2
MS.gene057790.t1	MTR_4g005320	47.541	61	31	1	21	81	70	129	2.11e-13	62.0
MS.gene057790.t1	MTR_4g072160	51.613	62	29	1	20	81	36	96	4.67e-13	60.5
MS.gene057790.t1	MTR_3g109160	52.459	61	28	1	21	81	69	128	5.23e-13	60.8
MS.gene057790.t1	MTR_8g461210	47.059	68	32	2	20	84	34	100	2.71e-12	57.8
MS.gene057790.t1	MTR_8g026730	41.176	68	37	2	21	86	27	93	1.38e-11	55.8
MS.gene057790.t1	MTR_7g405740	40.260	77	44	2	5	81	52	126	2.04e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057790.t1	AT4G38840	54.545	99	32	2	1	86	1	99	3.91e-32	107
MS.gene057790.t1	AT5G18080	60.759	79	29	2	9	86	13	90	1.03e-29	101
MS.gene057790.t1	AT4G34800	57.317	82	32	1	1	79	1	82	1.04e-29	101
MS.gene057790.t1	AT2G21210	54.321	81	35	1	8	86	15	95	2.41e-29	100
MS.gene057790.t1	AT5G18060	59.494	79	30	2	9	86	13	90	2.55e-29	100
MS.gene057790.t1	AT5G18050	58.228	79	31	2	9	86	13	90	2.94e-29	100
MS.gene057790.t1	AT5G18020	58.228	79	31	2	9	86	13	90	3.49e-29	100
MS.gene057790.t1	AT4G38825	57.500	80	30	2	8	86	13	89	7.18e-29	99.4
MS.gene057790.t1	AT2G21210	54.321	81	35	1	8	86	82	162	1.22e-28	100
MS.gene057790.t1	AT2G21200	62.500	72	26	1	15	85	15	86	1.49e-28	98.6
MS.gene057790.t1	AT5G18030	59.494	79	28	2	9	86	13	88	1.49e-28	98.6
MS.gene057790.t1	AT4G34810	61.728	81	26	2	10	85	37	117	3.78e-28	98.6
MS.gene057790.t1	AT5G18010	56.962	79	32	2	9	86	13	90	1.70e-27	95.9
MS.gene057790.t1	AT4G38850	54.878	82	29	2	8	86	13	89	1.04e-26	94.0
MS.gene057790.t1	AT4G34770	55.952	84	35	1	5	86	19	102	2.52e-26	93.2
MS.gene057790.t1	AT3G03840	56.410	78	32	1	11	86	17	94	3.18e-26	92.8
MS.gene057790.t1	AT3G03820	54.430	79	33	1	11	86	17	95	2.12e-25	90.9
MS.gene057790.t1	AT4G13790	48.235	85	41	2	3	85	8	91	2.73e-25	90.5
MS.gene057790.t1	AT3G03850	62.687	67	23	1	22	86	26	92	8.76e-25	89.0
MS.gene057790.t1	AT3G03830	54.545	77	32	1	13	86	16	92	3.38e-24	87.4
MS.gene057790.t1	AT4G34790	60.000	65	24	1	21	83	39	103	2.10e-23	85.9
MS.gene057790.t1	AT4G34780	57.143	70	27	1	19	85	26	95	4.72e-22	82.4
MS.gene057790.t1	AT4G38860	51.471	68	33	0	19	86	38	105	1.06e-20	79.0
MS.gene057790.t1	AT2G21220	50.000	68	33	1	19	86	38	104	4.11e-19	75.1
MS.gene057790.t1	AT1G75580	53.731	67	30	1	19	85	42	107	4.50e-19	75.1
MS.gene057790.t1	AT4G34760	50.746	67	32	1	19	85	41	106	1.21e-18	73.9
MS.gene057790.t1	AT3G43120	54.237	59	26	1	20	78	78	135	9.03e-18	73.2
MS.gene057790.t1	AT2G16580	49.231	65	32	1	19	83	42	105	2.32e-17	70.9
MS.gene057790.t1	AT4G36110	42.500	80	45	1	4	83	23	101	2.64e-17	70.5
MS.gene057790.t1	AT5G20810	54.237	59	26	1	20	78	78	135	1.28e-16	70.1
MS.gene057790.t1	AT5G20810	54.237	59	26	1	20	78	78	135	1.92e-16	70.5
MS.gene057790.t1	AT1G19830	52.941	68	30	2	19	85	46	112	2.75e-16	68.2
MS.gene057790.t1	AT2G18010	48.438	64	32	1	20	83	47	109	3.00e-16	68.2
MS.gene057790.t1	AT3G20220	50.769	65	30	2	21	84	47	110	1.88e-15	66.2
MS.gene057790.t1	AT5G66260	46.970	66	34	1	21	86	34	98	3.62e-14	62.4
MS.gene057790.t1	AT2G37030	47.619	63	32	1	20	82	48	109	1.46e-13	61.6
MS.gene057790.t1	AT1G75590	46.575	73	36	2	10	80	29	100	2.25e-13	61.6
MS.gene057790.t1	AT3G51200	41.463	82	42	3	5	81	19	99	3.22e-13	60.1
MS.gene057790.t1	AT2G46690	42.857	77	40	2	5	78	8	83	3.31e-13	60.5
MS.gene057790.t1	AT5G10990	44.156	77	37	2	4	80	29	99	7.72e-13	60.1
MS.gene057790.t1	AT3G53250	44.444	63	31	1	20	82	51	109	1.71e-12	58.5
MS.gene057790.t1	AT3G53250	44.444	63	31	1	20	82	82	140	2.40e-12	58.9
MS.gene057790.t1	AT1G19840	45.455	77	36	2	4	80	29	99	2.87e-12	58.9
MS.gene057790.t1	AT4G31320	45.588	68	36	1	14	81	73	139	3.65e-12	59.3
MS.gene057790.t1	AT4G12410	45.588	68	33	2	21	85	76	142	4.97e-12	58.2
MS.gene057790.t1	AT4G34750	42.188	64	36	1	20	83	36	98	6.38e-12	57.8
MS.gene057790.t1	AT4G34750	42.188	64	36	1	20	83	36	98	6.38e-12	57.8
MS.gene057790.t1	AT4G22620	40.789	76	41	2	13	85	71	145	1.21e-11	57.4
MS.gene057790.t1	AT4G00880	42.308	78	39	3	3	78	13	86	2.24e-11	55.8
MS.gene057790.t1	AT2G45210	38.889	72	40	2	17	85	75	145	2.35e-11	56.6
MS.gene057790.t1	AT2G24400	49.180	61	30	1	21	81	64	123	2.97e-11	56.6
MS.gene057790.t1	AT5G03310	47.059	68	29	3	20	81	38	104	4.35e-11	54.7

Find 16 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTGGCTTAACAATTCT+TGG	0.200185	4.4:-36651282	None:intergenic
ACAATTCTTGGAATGAGGTT+TGG	0.397053	4.4:-36651270	None:intergenic
GTTTGGTTCAAGTATGATAC+AGG	0.430787	4.4:-36651253	None:intergenic
GCTTAACAATTCTTGGAATG+AGG	0.457370	4.4:-36651275	None:intergenic
ATTGAATATGATCATCCAAC+GGG	0.473372	4.4:+36651313	MS.gene057790:CDS
TACCAAGTATCATCAGATCA+AGG	0.490956	4.4:+36651149	MS.gene057790:CDS
GCCCTTGATCTGATGATACT+TGG	0.512708	4.4:-36651151	None:intergenic
TACACAGCTAGATATCCCTT+TGG	0.526180	4.4:-36651199	None:intergenic
GGATATCTAGCTGTGTATGT+AGG	0.572626	4.4:+36651205	MS.gene057790:CDS
AAGAAAACGTCTTCTCTGCA+AGG	0.585314	4.4:-36651349	None:intergenic
AAAACTGTGGACGTTCCAAA+GGG	0.591452	4.4:+36651184	MS.gene057790:CDS
AATTGAATATGATCATCCAA+CGG	0.593128	4.4:+36651312	MS.gene057790:CDS
ACCAAGTATCATCAGATCAA+GGG	0.600732	4.4:+36651150	MS.gene057790:CDS
GGAATAGTGAGACCACCCGT+TGG	0.627472	4.4:-36651328	None:intergenic
GAATATGATCATCCAACGGG+TGG	0.646056	4.4:+36651316	MS.gene057790:CDS
AGAATTGTTAAGCCAAGCTG+AGG	0.653696	4.4:+36651285	MS.gene057790:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATTGAATATGATCATCCAA+CGG	+	chr4.4:36651312-36651331	MS.gene057790:CDS	25.0%
	ATTGAATATGATCATCCAAC+GGG	+	chr4.4:36651313-36651332	MS.gene057790:CDS	30.0%
!!!	ATTCAATTTTTTCCTCAGCT+TGG	-	chr4.4:36651300-36651319	None:intergenic	30.0%
	ACAATTCTTGGAATGAGGTT+TGG	-	chr4.4:36651273-36651292	None:intergenic	35.0%
	ACCAAGTATCATCAGATCAA+GGG	+	chr4.4:36651150-36651169	MS.gene057790:CDS	35.0%
	GCTTAACAATTCTTGGAATG+AGG	-	chr4.4:36651278-36651297	None:intergenic	35.0%
	TACCAAGTATCATCAGATCA+AGG	+	chr4.4:36651149-36651168	MS.gene057790:CDS	35.0%
!	GTTTGGTTCAAGTATGATAC+AGG	-	chr4.4:36651256-36651275	None:intergenic	35.0%
	AAAAACTGTGGACGTTCCAA+AGG	+	chr4.4:36651183-36651202	MS.gene057790:CDS	40.0%
	AAAACTGTGGACGTTCCAAA+GGG	+	chr4.4:36651184-36651203	MS.gene057790:CDS	40.0%
	AAGAAAACGTCTTCTCTGCA+AGG	-	chr4.4:36651352-36651371	None:intergenic	40.0%
	AGAATTGTTAAGCCAAGCTG+AGG	+	chr4.4:36651285-36651304	MS.gene057790:CDS	40.0%
	CAGCTTGGCTTAACAATTCT+TGG	-	chr4.4:36651285-36651304	None:intergenic	40.0%
	GGATATCTAGCTGTGTATGT+AGG	+	chr4.4:36651205-36651224	MS.gene057790:CDS	40.0%
	GGCATCATCTTCAAAAACTG+TGG	+	chr4.4:36651171-36651190	MS.gene057790:CDS	40.0%
	TACACAGCTAGATATCCCTT+TGG	-	chr4.4:36651202-36651221	None:intergenic	40.0%
	GAATATGATCATCCAACGGG+TGG	+	chr4.4:36651316-36651335	MS.gene057790:CDS	45.0%
	GCCCTTGATCTGATGATACT+TGG	-	chr4.4:36651154-36651173	None:intergenic	45.0%
	GGAATAGTGAGACCACCCGT+TGG	-	chr4.4:36651331-36651350	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36651136	36651396	36651136	ID=MS.gene057790
chr4.4	mRNA	36651136	36651396	36651136	ID=MS.gene057790.t1;Parent=MS.gene057790
chr4.4	exon	36651136	36651396	36651136	ID=MS.gene057790.t1.exon1;Parent=MS.gene057790.t1
chr4.4	CDS	36651136	36651396	36651136	ID=cds.MS.gene057790.t1;Parent=MS.gene057790.t1

Gene Sequence	>MS.gene057790 ATGGGTTTTCGTTTACCAAGTATCATCAGATCAAGGGCATCATCTTCAAAAACTGTGGACGTTCCAAAGGGATATCTAGCTGTGTATGTAGGAGAGCAAATGAAGCGATTTGTGATTCCTGTATCATACTTGAACCAAACCTCATTCCAAGAATTGTTAAGCCAAGCTGAGGAAAAAATTGAATATGATCATCCAACGGGTGGTCTCACTATTCCTTGCAGAGAAGACGTTTTCTTAGAGATCACTTCTCGTTTGAATTGA
Protein sequence	>MS.gene057790.t1 MGFRLPSIIRSRASSSKTVDVPKGYLAVYVGEQMKRFVIPVSYLNQTSFQELLSQAEEKIEYDHPTGGLTIPCREDVFLEITSRLN