AlfalfaGEDB | MS.gene045368

M. sativa cultivar XinJiangDaYe / MS.gene045368

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045368.t1	XP_003601667.1	95.7	92	4	0	1	92	1	92	3.80E-43	183.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045368.t1	P33080	72.8	92	25	0	1	92	1	92	1.2e-34	146.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045368.t1	G7JAQ1	95.7	92	4	0	1	92	1	92	2.7e-43	183.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50657	MS.gene045368	PPI
MS.gene045368	MS.gene23368	PPI
MS.gene50651	MS.gene045368	PPI
MS.gene50685	MS.gene045368	PPI
MS.gene045368	MS.gene057817	PPI
MS.gene062962	MS.gene045368	PPI
MS.gene045368	MS.gene50668	PPI
MS.gene045368	MS.gene70684	PPI
MS.gene045368	MS.gene062958	PPI
MS.gene50683	MS.gene045368	PPI
MS.gene045368	MS.gene003612	PPI
MS.gene045368	MS.gene062983	PPI
MS.gene045368	MS.gene057777	PPI
MS.gene77525	MS.gene045368	PPI
MS.gene057807	MS.gene045368	PPI
MS.gene062969	MS.gene045368	PPI
MS.gene045368	MS.gene062940	PPI
MS.gene23369	MS.gene045368	PPI
MS.gene045368	MS.gene062989	PPI
MS.gene045368	MS.gene003595	PPI
MS.gene045368	MS.gene70685	PPI
MS.gene045368	MS.gene062959	PPI
MS.gene003626	MS.gene045368	PPI
MS.gene045368	MS.gene50686	PPI
MS.gene045368	MS.gene50664	PPI
MS.gene045368	MS.gene057785	PPI
MS.gene045368	MS.gene70683	PPI
MS.gene062946	MS.gene045368	PPI
MS.gene062967	MS.gene045368	PPI
MS.gene045368	MS.gene50670	PPI
MS.gene057805	MS.gene045368	PPI
MS.gene003605	MS.gene045368	PPI
MS.gene062944	MS.gene045368	PPI
MS.gene057798	MS.gene045368	PPI
MS.gene062971	MS.gene045368	PPI
MS.gene23373	MS.gene045368	PPI
MS.gene045368	MS.gene062941	PPI
MS.gene062954	MS.gene045368	PPI
MS.gene045368	MS.gene50660	PPI
MS.gene045368	MS.gene003623	PPI
MS.gene062975	MS.gene045368	PPI
MS.gene50689	MS.gene045368	PPI
MS.gene045368	MS.gene057794	PPI
MS.gene003576	MS.gene045368	PPI
MS.gene50674	MS.gene045368	PPI
MS.gene045368	MS.gene062980	PPI
MS.gene045368	MS.gene23367	PPI
MS.gene057782	MS.gene045368	PPI
MS.gene003606	MS.gene045368	PPI
MS.gene057806	MS.gene045368	PPI
MS.gene045368	MS.gene057802	PPI
MS.gene50673	MS.gene045368	PPI
MS.gene045368	MS.gene057796	PPI
MS.gene062970	MS.gene045368	PPI
MS.gene045368	MS.gene50682	PPI
MS.gene062942	MS.gene045368	PPI
MS.gene057779	MS.gene045368	PPI
MS.gene003629	MS.gene045368	PPI
MS.gene045368	MS.gene003598	PPI
MS.gene045368	MS.gene50690	PPI
MS.gene003597	MS.gene045368	PPI
MS.gene062972	MS.gene045368	PPI
MS.gene003610	MS.gene045368	PPI
MS.gene045368	MS.gene003613	PPI
MS.gene003580	MS.gene045368	PPI
MS.gene045368	MS.gene057799	PPI
MS.gene003582	MS.gene045368	PPI
MS.gene045368	MS.gene003630	PPI
MS.gene057800	MS.gene045368	PPI
MS.gene50772	MS.gene045368	PPI
MS.gene045368	MS.gene062965	PPI
MS.gene045368	MS.gene50771	PPI
MS.gene057809	MS.gene045368	PPI
MS.gene062966	MS.gene045368	PPI
MS.gene045368	MS.gene022358	PPI
MS.gene057784	MS.gene045368	PPI
MS.gene057783	MS.gene045368	PPI
MS.gene062978	MS.gene045368	PPI
MS.gene50688	MS.gene045368	PPI
MS.gene045368	MS.gene062986	PPI
MS.gene50669	MS.gene045368	PPI
MS.gene045368	MS.gene50770	PPI
MS.gene045368	MS.gene062987	PPI
MS.gene045368	MS.gene057811	PPI
MS.gene003593	MS.gene045368	PPI
MS.gene045368	MS.gene062964	PPI
MS.gene003579	MS.gene045368	PPI
MS.gene50662	MS.gene045368	PPI
MS.gene045368	MS.gene50658	PPI
MS.gene003628	MS.gene045368	PPI
MS.gene045368	MS.gene50655	PPI
MS.gene045368	MS.gene28863	PPI
MS.gene003607	MS.gene045368	PPI
MS.gene045368	MS.gene003584	PPI
MS.gene045368	MS.gene062945	PPI
MS.gene045368	MS.gene057791	PPI
MS.gene045368	MS.gene057804	PPI
MS.gene003585	MS.gene045368	PPI
MS.gene003581	MS.gene045368	PPI
MS.gene045368	MS.gene50656	PPI
MS.gene50653	MS.gene045368	PPI
MS.gene057816	MS.gene045368	PPI
MS.gene003603	MS.gene045368	PPI
MS.gene045368	MS.gene50666	PPI
MS.gene045368	MS.gene062985	PPI
MS.gene045368	MS.gene062953	PPI
MS.gene045368	MS.gene003622	PPI
MS.gene057780	MS.gene045368	PPI
MS.gene057788	MS.gene045368	PPI
MS.gene50773	MS.gene045368	PPI
MS.gene045368	MS.gene003599	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045368.t1	MTR_3g084150	95.652	92	4	0	1	92	1	92	8.09e-64	187
MS.gene045368.t1	MTR_3g084180	94.565	92	5	0	1	92	1	92	5.53e-63	185
MS.gene045368.t1	MTR_8g461410	92.391	92	7	0	1	92	1	92	3.00e-62	184
MS.gene045368.t1	MTR_3g110042	90.805	87	8	0	1	87	1	87	9.00e-56	167
MS.gene045368.t1	MTR_3g084170	87.097	93	10	2	1	92	1	92	3.86e-55	166
MS.gene045368.t1	MTR_3g084240	86.022	93	11	2	1	92	1	92	4.05e-54	163
MS.gene045368.t1	MTR_3g110038	86.022	93	11	2	1	92	1	92	4.51e-54	163
MS.gene045368.t1	MTR_3g084220	84.946	93	12	2	1	92	1	92	1.82e-53	161
MS.gene045368.t1	MTR_3g110032	81.720	93	16	1	1	92	1	93	9.63e-53	159
MS.gene045368.t1	MTR_3g117630	87.209	86	11	0	7	92	7	92	1.91e-52	159
MS.gene045368.t1	MTR_4g050700	80.645	93	17	1	1	92	1	93	1.99e-52	159
MS.gene045368.t1	MTR_2g012410	80.645	93	17	1	1	92	1	93	1.99e-52	159
MS.gene045368.t1	MTR_3g084260	78.495	93	19	1	1	92	1	93	5.54e-50	152
MS.gene045368.t1	MTR_4g072880	75.269	93	22	1	1	92	1	93	4.81e-49	150
MS.gene045368.t1	MTR_3g084250	73.913	92	24	0	1	92	1	92	4.58e-48	148
MS.gene045368.t1	MTR_4g072500	75.000	92	23	0	1	92	1	92	5.40e-48	147
MS.gene045368.t1	MTR_4g072310	74.194	93	23	1	1	92	1	93	8.44e-48	147
MS.gene045368.t1	MTR_4g072250	76.344	93	20	2	1	92	1	92	1.34e-47	147
MS.gene045368.t1	MTR_4g072570	76.087	92	22	0	1	92	1	92	2.77e-47	146
MS.gene045368.t1	MTR_4g072480	72.826	92	25	0	1	92	1	92	3.10e-46	143
MS.gene045368.t1	MTR_4g072270	72.043	93	25	1	1	92	1	93	3.37e-46	143
MS.gene045368.t1	MTR_4g072680	72.826	92	25	0	1	92	1	92	5.24e-46	142
MS.gene045368.t1	MTR_4g072620	71.739	92	26	0	1	92	1	92	7.87e-46	142
MS.gene045368.t1	MTR_4g072230	76.344	93	19	2	1	92	1	91	7.98e-46	142
MS.gene045368.t1	MTR_4g072330	72.222	90	23	1	1	90	1	88	1.43e-45	141
MS.gene045368.t1	MTR_4g072730	72.527	91	25	0	1	91	1	91	1.50e-45	141
MS.gene045368.t1	MTR_4g072610	74.444	90	17	1	1	90	1	84	1.52e-45	141
MS.gene045368.t1	MTR_4g072370	74.444	90	21	1	1	90	1	88	1.80e-45	141
MS.gene045368.t1	MTR_4g072530	73.333	90	24	0	1	90	1	90	1.90e-45	141
MS.gene045368.t1	MTR_4g072640	74.444	90	23	0	1	90	1	90	2.31e-45	141
MS.gene045368.t1	MTR_4g072860	73.118	93	24	1	1	92	1	93	2.51e-45	141
MS.gene045368.t1	MTR_4g072870	69.231	91	27	1	1	90	1	91	1.27e-44	139
MS.gene045368.t1	MTR_4g072740	73.333	90	19	1	1	90	1	85	1.34e-44	139
MS.gene045368.t1	MTR_4g072240	71.429	91	25	1	1	90	1	91	1.40e-44	139
MS.gene045368.t1	MTR_4g072460	70.652	92	27	0	1	92	1	92	1.94e-44	139
MS.gene045368.t1	MTR_4g072490	73.626	91	17	2	1	90	1	85	2.05e-44	138
MS.gene045368.t1	MTR_4g072830	75.281	89	20	1	1	89	1	87	3.20e-44	138
MS.gene045368.t1	MTR_4g072300	71.429	91	25	1	1	90	1	91	5.70e-44	137
MS.gene045368.t1	MTR_4g072470	72.222	90	20	1	1	90	1	85	1.06e-43	136
MS.gene045368.t1	MTR_4g072580	73.626	91	17	2	1	90	1	85	1.99e-43	136
MS.gene045368.t1	MTR_4g072650	72.222	90	19	1	1	90	1	84	2.31e-43	135
MS.gene045368.t1	MTR_4g072220	68.817	93	28	1	1	92	1	93	4.65e-43	135
MS.gene045368.t1	MTR_4g072260	66.667	93	30	1	1	92	1	93	5.99e-43	135
MS.gene045368.t1	MTR_4g072465	70.000	90	23	1	1	90	1	86	6.00e-43	135
MS.gene045368.t1	MTR_4g072820	72.527	91	18	2	1	90	1	85	1.40e-42	134
MS.gene045368.t1	MTR_3g084210	72.826	92	25	0	1	92	1	92	2.39e-42	133
MS.gene045368.t1	MTR_4g072630	68.889	90	24	1	1	90	1	86	5.26e-42	132
MS.gene045368.t1	MTR_4g072890	67.033	91	29	1	1	90	1	91	5.41e-42	132
MS.gene045368.t1	MTR_4g072850	73.404	94	23	1	1	92	1	94	1.93e-41	131
MS.gene045368.t1	MTR_4g072540	73.333	90	20	1	1	90	1	86	3.55e-41	130
MS.gene045368.t1	MTR_4g072670	71.111	90	22	1	1	90	1	86	7.33e-41	129
MS.gene045368.t1	MTR_5g008360	77.215	79	18	0	14	92	5	83	8.64e-41	129
MS.gene045368.t1	MTR_4g072660	67.391	92	25	1	1	92	1	87	1.51e-40	129
MS.gene045368.t1	MTR_3g084190	70.652	92	27	0	1	92	1	92	3.26e-40	128
MS.gene045368.t1	MTR_4g072720	71.111	90	22	1	1	90	1	86	4.83e-40	127
MS.gene045368.t1	MTR_8g461420	71.111	90	26	0	1	90	1	90	9.55e-40	127
MS.gene045368.t1	MTR_4g072600	72.727	88	17	2	1	87	1	82	1.28e-39	126
MS.gene045368.t1	MTR_3g084200	84.932	73	9	2	1	72	1	72	1.32e-39	127
MS.gene045368.t1	MTR_3g084160	69.565	92	28	0	1	92	1	92	1.71e-39	126
MS.gene045368.t1	MTR_3g084230	71.111	90	26	0	1	90	1	90	2.40e-39	125
MS.gene045368.t1	MTR_4g072510	70.000	90	23	1	1	90	1	86	4.95e-39	125
MS.gene045368.t1	MTR_4g072590	71.111	90	21	1	1	90	1	85	6.75e-39	124
MS.gene045368.t1	MTR_3g110045	72.222	90	25	0	3	92	62	151	7.58e-39	126
MS.gene045368.t1	MTR_4g072380	70.330	91	21	2	1	90	1	86	1.44e-38	124
MS.gene045368.t1	MTR_5g008370	67.033	91	30	0	1	91	1	91	5.51e-38	124
MS.gene045368.t1	MTR_4g072940	70.652	92	25	1	3	92	33	124	7.44e-37	120
MS.gene045368.t1	MTR_4g072690	70.000	90	22	1	1	90	1	85	1.56e-36	118
MS.gene045368.t1	MTR_4g072450	68.889	90	23	1	1	90	1	85	8.15e-36	117
MS.gene045368.t1	MTR_5g008350	71.250	80	16	2	1	79	1	74	8.35e-36	116
MS.gene045368.t1	MTR_4g072550	71.233	73	21	0	20	92	31	103	1.69e-34	114
MS.gene045368.t1	MTR_4g072980	56.842	95	38	2	1	92	1	95	3.19e-34	113
MS.gene045368.t1	MTR_4g072560	52.041	98	39	3	1	90	1	98	6.80e-32	107
MS.gene045368.t1	MTR_4g072770	58.889	90	27	1	1	90	1	80	1.64e-31	105
MS.gene045368.t1	MTR_4g072910	59.036	83	34	0	8	90	18	100	1.71e-31	106
MS.gene045368.t1	MTR_3g117640	66.667	69	22	1	24	91	33	101	2.55e-30	103
MS.gene045368.t1	MTR_4g072750	68.919	74	21	1	1	72	1	74	5.98e-30	102
MS.gene045368.t1	MTR_4g072290	58.065	93	24	2	1	92	1	79	8.55e-30	101
MS.gene045368.t1	MTR_8g461400	58.065	93	11	3	1	92	1	66	2.24e-28	97.4
MS.gene045368.t1	MTR_4g072280	62.667	75	27	1	1	74	1	75	4.95e-27	94.7
MS.gene045368.t1	MTR_3g110035	65.152	66	23	0	27	92	73	138	5.12e-27	96.3
MS.gene045368.t1	MTR_4g072930	48.936	94	42	2	3	90	17	110	1.15e-25	92.0
MS.gene045368.t1	MTR_3g113310	58.462	65	26	1	23	87	40	103	1.74e-24	89.0
MS.gene045368.t1	MTR_3g117610	60.000	65	25	1	23	87	43	106	1.81e-23	86.7
MS.gene045368.t1	MTR_6g077850	55.224	67	30	0	24	90	33	99	1.84e-23	86.3
MS.gene045368.t1	MTR_4g072190	51.250	80	36	2	8	87	21	97	4.61e-23	85.1
MS.gene045368.t1	MTR_4g072840	52.273	88	10	3	1	87	1	57	2.04e-22	82.4
MS.gene045368.t1	MTR_5g021820	54.688	64	28	1	24	87	39	101	7.78e-20	77.0
MS.gene045368.t1	MTR_8g076040	50.000	74	36	1	14	87	30	102	8.53e-20	77.0
MS.gene045368.t1	MTR_2g043960	53.030	66	30	1	17	82	68	132	8.78e-19	75.9
MS.gene045368.t1	MTR_4g124750	53.125	64	29	1	24	87	68	130	5.70e-18	73.6
MS.gene045368.t1	MTR_1g009150	52.113	71	33	1	15	85	61	130	7.56e-18	73.9
MS.gene045368.t1	MTR_4g005310	50.000	66	32	1	21	85	58	123	6.30e-17	70.9
MS.gene045368.t1	MTR_4g005320	54.098	61	27	1	25	85	70	129	7.14e-17	71.2
MS.gene045368.t1	MTR_1g094750	44.318	88	45	2	1	85	23	109	1.14e-16	69.3
MS.gene045368.t1	MTR_3g105900	83.333	36	6	0	24	59	1171	1206	2.36e-15	69.7
MS.gene045368.t1	MTR_1g024085	49.254	67	33	1	16	82	28	93	3.42e-15	66.2
MS.gene045368.t1	MTR_3g109160	52.239	67	31	1	25	91	69	134	4.75e-15	66.6
MS.gene045368.t1	MTR_4g072160	50.000	70	32	2	17	85	29	96	6.53e-15	65.5
MS.gene045368.t1	MTR_8g461210	42.529	87	47	2	7	91	17	102	8.84e-15	64.7
MS.gene045368.t1	MTR_7g118010	50.794	63	28	2	25	85	23	84	2.19e-14	63.2
MS.gene045368.t1	MTR_3g092220	41.667	84	43	4	1	82	12	91	3.02e-14	63.2
MS.gene045368.t1	MTR_4g025830	44.776	67	33	2	25	88	79	144	3.90e-14	63.9
MS.gene045368.t1	MTR_1g061570	42.169	83	44	2	9	91	6	84	5.92e-14	62.8
MS.gene045368.t1	MTR_0388s0020	41.975	81	42	3	10	87	61	139	6.81e-14	63.2
MS.gene045368.t1	MTR_7g101740	46.875	64	33	1	24	87	39	101	1.10e-13	61.6
MS.gene045368.t1	MTR_7g405740	40.476	84	45	3	6	85	44	126	2.63e-13	62.0
MS.gene045368.t1	MTR_1g063950	40.580	69	40	1	17	85	40	107	3.71e-13	60.5
MS.gene045368.t1	MTR_8g026730	48.333	60	28	2	25	82	27	85	6.42e-13	59.7
MS.gene045368.t1	MTR_8g101520	37.500	88	50	2	7	90	28	114	1.66e-12	59.7
MS.gene045368.t1	MTR_3g098970	34.211	76	49	1	17	92	45	119	2.05e-12	59.3
MS.gene045368.t1	MTR_4g021810	52.542	59	26	2	25	82	26	83	2.44e-12	58.2
MS.gene045368.t1	MTR_1g059770	31.707	82	55	1	6	87	30	110	1.30e-11	56.6
MS.gene045368.t1	MTR_3g097120	38.750	80	40	2	19	90	3	81	1.77e-11	55.8
MS.gene045368.t1	MTR_8g096470	41.667	60	34	1	26	85	47	105	4.54e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045368.t1	AT4G38840	59.596	99	31	2	1	90	1	99	2.65e-36	118
MS.gene045368.t1	AT5G18020	67.105	76	24	1	16	90	15	90	1.56e-34	114
MS.gene045368.t1	AT5G18060	68.919	74	21	2	19	90	17	90	3.88e-33	110
MS.gene045368.t1	AT5G18050	63.158	76	27	1	16	90	15	90	9.53e-33	109
MS.gene045368.t1	AT4G38825	65.333	75	25	1	17	90	15	89	1.13e-32	109
MS.gene045368.t1	AT5G18030	68.056	72	22	1	20	90	17	88	1.21e-32	108
MS.gene045368.t1	AT5G18080	64.474	76	26	1	16	90	15	90	1.23e-32	108
MS.gene045368.t1	AT2G21200	66.667	72	23	1	19	89	15	86	6.75e-32	107
MS.gene045368.t1	AT2G21210	63.514	74	25	1	19	90	22	95	1.18e-31	107
MS.gene045368.t1	AT5G18010	61.842	76	28	1	16	90	15	90	2.94e-31	105
MS.gene045368.t1	AT2G21210	63.514	74	25	1	19	90	89	162	7.40e-31	107
MS.gene045368.t1	AT4G34770	65.789	76	24	1	18	91	28	103	1.08e-30	104
MS.gene045368.t1	AT3G03840	61.644	73	26	1	21	91	23	95	1.12e-29	101
MS.gene045368.t1	AT4G34800	56.322	87	34	2	7	89	2	88	1.65e-29	101
MS.gene045368.t1	AT3G03850	67.647	68	20	1	26	91	26	93	9.43e-29	99.4
MS.gene045368.t1	AT4G38850	56.098	82	31	2	12	88	6	87	2.94e-28	98.2
MS.gene045368.t1	AT3G03820	57.143	77	30	1	18	91	20	96	4.26e-28	97.8
MS.gene045368.t1	AT4G34810	61.765	68	22	1	24	87	47	114	8.00e-28	97.8
MS.gene045368.t1	AT3G03830	51.648	91	37	2	7	90	2	92	1.21e-26	94.0
MS.gene045368.t1	AT4G13790	50.602	83	34	2	8	88	13	90	2.08e-25	90.9
MS.gene045368.t1	AT4G34780	59.155	71	26	1	23	90	26	96	8.11e-25	89.7
MS.gene045368.t1	AT1G75580	51.899	79	37	1	9	87	28	105	1.34e-23	86.7
MS.gene045368.t1	AT4G34790	60.000	65	24	1	25	87	39	103	2.03e-23	86.3
MS.gene045368.t1	AT4G38860	56.923	65	28	0	23	87	38	102	2.14e-23	86.3
MS.gene045368.t1	AT4G34760	46.429	84	44	1	4	87	22	104	4.90e-22	82.8
MS.gene045368.t1	AT2G21220	56.923	65	27	1	23	87	38	101	5.05e-22	82.8
MS.gene045368.t1	AT4G36110	47.619	84	41	2	8	89	21	103	4.58e-21	80.1
MS.gene045368.t1	AT2G16580	49.315	73	36	1	15	87	34	105	4.36e-20	77.8
MS.gene045368.t1	AT3G43120	50.725	69	33	1	14	82	68	135	6.60e-20	79.0
MS.gene045368.t1	AT2G18010	53.030	66	30	1	24	89	47	111	7.24e-20	77.4
MS.gene045368.t1	AT3G20220	48.052	77	38	2	14	89	36	111	1.42e-19	77.0
MS.gene045368.t1	AT1G19830	45.977	87	34	2	8	82	19	104	7.10e-19	75.1
MS.gene045368.t1	AT5G20810	53.030	66	30	1	17	82	71	135	3.11e-18	74.7
MS.gene045368.t1	AT5G20810	53.030	66	30	1	17	82	71	135	3.52e-18	75.1
MS.gene045368.t1	AT5G66260	47.674	86	40	3	8	90	15	98	1.10e-16	68.9
MS.gene045368.t1	AT1G75590	54.237	59	26	1	24	82	41	98	6.18e-16	68.6
MS.gene045368.t1	AT5G10990	48.611	72	30	2	24	89	40	110	2.16e-15	67.0
MS.gene045368.t1	AT4G31320	48.101	79	33	3	8	85	68	139	3.33e-15	67.4
MS.gene045368.t1	AT1G19840	54.237	59	26	1	24	82	40	97	8.41e-15	65.5
MS.gene045368.t1	AT4G34750	37.975	79	48	1	9	87	21	98	9.60e-15	65.5
MS.gene045368.t1	AT4G34750	37.975	79	48	1	9	87	21	98	9.60e-15	65.5
MS.gene045368.t1	AT3G51200	46.269	67	34	2	20	85	34	99	2.43e-14	63.2
MS.gene045368.t1	AT2G24400	49.367	79	32	3	8	85	52	123	3.72e-14	64.3
MS.gene045368.t1	AT2G37030	46.032	63	33	1	24	86	48	109	1.20e-13	62.0
MS.gene045368.t1	AT2G46690	39.744	78	43	2	17	91	16	92	1.30e-13	61.6
MS.gene045368.t1	AT3G61900	44.286	70	35	2	24	90	29	97	4.31e-13	60.8
MS.gene045368.t1	AT3G12830	38.095	84	47	2	6	85	27	109	2.39e-12	58.9
MS.gene045368.t1	AT3G53250	42.857	63	32	1	24	86	51	109	3.04e-12	58.2
MS.gene045368.t1	AT4G00880	52.459	61	26	2	24	82	27	86	3.18e-12	58.2
MS.gene045368.t1	AT3G09870	47.692	65	31	2	15	77	35	98	4.63e-12	57.4
MS.gene045368.t1	AT3G53250	42.857	63	32	1	24	86	82	140	5.69e-12	58.2
MS.gene045368.t1	AT1G56150	45.902	61	32	1	25	85	38	97	1.22e-11	56.2
MS.gene045368.t1	AT4G09530	41.667	72	37	3	14	82	19	88	1.56e-11	55.8
MS.gene045368.t1	AT4G12410	42.647	68	35	2	25	89	76	142	2.11e-11	57.0
MS.gene045368.t1	AT5G53590	41.791	67	33	2	24	85	45	110	2.47e-11	56.2

Find 22 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTAGACGAACTTCATTTAC+AGG	0.268008	3.4:-78886387	MS.gene045368:CDS
CAAATTACTTCTCGCTTCAA+TGG	0.364677	3.4:-78886159	MS.gene045368:CDS
TTCGTCTAATAGCAGGTAAA+CGG	0.451949	3.4:+78886400	None:intergenic
AAATTACTTCTCGCTTCAAT+GGG	0.465238	3.4:-78886158	MS.gene045368:CDS
AGTCAAGCAGAGGAAGAATT+CGG	0.474154	3.4:-78886237	MS.gene045368:CDS
GAATTGTGAGGCCACCCATT+GGG	0.504738	3.4:+78886205	None:intergenic
GGATATCTTGCAGTATATGT+TGG	0.514243	3.4:-78886327	MS.gene045368:CDS
AATGAAGTTCGTCTAATAGC+AGG	0.529225	3.4:+78886393	None:intergenic
TTCGGATATGATCACCCAAT+GGG	0.534324	3.4:-78886219	MS.gene045368:CDS
GGAATTGTGAGGCCACCCAT+TGG	0.541668	3.4:+78886204	None:intergenic
TATACTGCAAGATATCCCTT+TGG	0.554191	3.4:+78886333	None:intergenic
ATGAAAACATCTTCTGTGCA+AGG	0.577322	3.4:+78886183	None:intergenic
AAAGCTGTGAATGTGCCAAA+GGG	0.583150	3.4:-78886348	MS.gene045368:CDS
AAAAGCTGTGAATGTGCCAA+AGG	0.600085	3.4:-78886349	MS.gene045368:CDS
ATTCGGATATGATCACCCAA+TGG	0.609742	3.4:-78886220	MS.gene045368:CDS
AGCTTGGTTCAAGTATGACA+TGG	0.610689	3.4:+78886278	None:intergenic
GCTTGGTTCAAGTATGACAT+GGG	0.618074	3.4:+78886279	None:intergenic
AAATTTATTGAGTCAAGCAG+AGG	0.625368	3.4:-78886247	MS.gene045368:CDS
GGATATGATCACCCAATGGG+TGG	0.648309	3.4:-78886216	MS.gene045368:CDS
CTTGGTTCAAGTATGACATG+GGG	0.689184	3.4:+78886280	None:intergenic
ATGTTGGAGAGCAAATGAAG+CGG	0.701417	3.4:-78886311	MS.gene045368:CDS
CTTCTGTGCAAGGAATTGTG+AGG	0.738315	3.4:+78886193	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAAATTTTGAAATGAAGCT+TGG	+	chr3.4:78886301-78886320	None:intergenic	20.0%
	AAATTACTTCTCGCTTCAAT+GGG	-	chr3.4:78886402-78886421	MS.gene045368:CDS	30.0%
	AAATTTATTGAGTCAAGCAG+AGG	-	chr3.4:78886313-78886332	MS.gene045368:CDS	30.0%
	ATTAGACGAACTTCATTTAC+AGG	-	chr3.4:78886173-78886192	MS.gene045368:CDS	30.0%
	AATGAAGTTCGTCTAATAGC+AGG	+	chr3.4:78886170-78886189	None:intergenic	35.0%
	ATGAAAACATCTTCTGTGCA+AGG	+	chr3.4:78886380-78886399	None:intergenic	35.0%
	CAAATTACTTCTCGCTTCAA+TGG	-	chr3.4:78886401-78886420	MS.gene045368:CDS	35.0%
	GGATATCTTGCAGTATATGT+TGG	-	chr3.4:78886233-78886252	MS.gene045368:CDS	35.0%
	TATACTGCAAGATATCCCTT+TGG	+	chr3.4:78886230-78886249	None:intergenic	35.0%
	TTCGTCTAATAGCAGGTAAA+CGG	+	chr3.4:78886163-78886182	None:intergenic	35.0%
	AAAAGCTGTGAATGTGCCAA+AGG	-	chr3.4:78886211-78886230	MS.gene045368:CDS	40.0%
	AAAGCTGTGAATGTGCCAAA+GGG	-	chr3.4:78886212-78886231	MS.gene045368:CDS	40.0%
	AGCTTGGTTCAAGTATGACA+TGG	+	chr3.4:78886285-78886304	None:intergenic	40.0%
	AGTCAAGCAGAGGAAGAATT+CGG	-	chr3.4:78886323-78886342	MS.gene045368:CDS	40.0%
	ATGTTGGAGAGCAAATGAAG+CGG	-	chr3.4:78886249-78886268	MS.gene045368:CDS	40.0%
	ATTCGGATATGATCACCCAA+TGG	-	chr3.4:78886340-78886359	MS.gene045368:CDS	40.0%
	CTTGGTTCAAGTATGACATG+GGG	+	chr3.4:78886283-78886302	None:intergenic	40.0%
	GCTTGGTTCAAGTATGACAT+GGG	+	chr3.4:78886284-78886303	None:intergenic	40.0%
	TTCGGATATGATCACCCAAT+GGG	-	chr3.4:78886341-78886360	MS.gene045368:CDS	40.0%
!!!	TCACAGCTTTTGATGATGCT+TGG	+	chr3.4:78886202-78886221	None:intergenic	40.0%
	CTTCTGTGCAAGGAATTGTG+AGG	+	chr3.4:78886370-78886389	None:intergenic	45.0%
	GAATTGTGAGGCCACCCATT+GGG	+	chr3.4:78886358-78886377	None:intergenic	50.0%
	GGATATGATCACCCAATGGG+TGG	-	chr3.4:78886344-78886363	MS.gene045368:CDS	50.0%
	GGAATTGTGAGGCCACCCAT+TGG	+	chr3.4:78886359-78886378	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	78886152	78886430	78886152	ID=MS.gene045368
chr3.4	mRNA	78886152	78886430	78886152	ID=MS.gene045368.t1;Parent=MS.gene045368
chr3.4	exon	78886152	78886430	78886152	ID=MS.gene045368.t1.exon1;Parent=MS.gene045368.t1
chr3.4	CDS	78886152	78886430	78886152	ID=cds.MS.gene045368.t1;Parent=MS.gene045368.t1

Gene Sequence	>MS.gene045368 ATGGGTTTCCGTTTACCTGCTATTAGACGAACTTCATTTACAGGTAGCCAAGCATCATCAAAAGCTGTGAATGTGCCAAAGGGATATCTTGCAGTATATGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCAAGCTTCATTTCAAAATTTATTGAGTCAAGCAGAGGAAGAATTCGGATATGATCACCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATGTTTTCATTCAAATTACTTCTCGCTTCAATGGGCTATAA
Protein sequence	>MS.gene045368.t1 MGFRLPAIRRTSFTGSQASSKAVNVPKGYLAVYVGEQMKRFVIPMSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFIQITSRFNGL