AlfalfaGEDB | MS.gene23372

M. sativa cultivar XinJiangDaYe / MS.gene23372

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23372.t1	XP_003607106.1	89	91	10	0	1	91	1	91	2.50E-39	171

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23372.t1	P33079	71.4	91	26	0	1	91	1	91	5.1e-33	141.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23372.t1	G7JL28	89.0	91	10	0	1	91	1	91	1.8e-39	171.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049758	MS.gene23372	0.85355	2.22E-61	-1.69E-46
MS.gene050128	MS.gene23372	0.814191	1.75E-51	-1.69E-46
MS.gene050301	MS.gene23372	0.820676	6.05E-53	-1.69E-46
MS.gene051860	MS.gene23372	0.814759	1.31E-51	-1.69E-46
MS.gene052178	MS.gene23372	0.811999	5.28E-51	-1.69E-46
MS.gene052207	MS.gene23372	0.802581	5.24E-49	-1.69E-46
MS.gene053074	MS.gene23372	0.813975	1.95E-51	-1.69E-46
MS.gene053184	MS.gene23372	0.822524	2.26E-53	-1.69E-46
MS.gene053836	MS.gene23372	0.845733	3.38E-59	-1.69E-46
MS.gene054184	MS.gene23372	0.813075	3.08E-51	-1.69E-46
MS.gene054185	MS.gene23372	0.817646	2.96E-52	-1.69E-46
MS.gene054473	MS.gene23372	0.81264	3.83E-51	-1.69E-46
MS.gene054542	MS.gene23372	0.8008	1.22E-48	-1.69E-46
MS.gene054618	MS.gene23372	0.810526	1.10E-50	-1.69E-46
MS.gene055116	MS.gene23372	0.803033	4.23E-49	-1.69E-46
MS.gene055277	MS.gene23372	0.809396	1.93E-50	-1.69E-46
MS.gene055390	MS.gene23372	0.811239	7.73E-51	-1.69E-46
MS.gene055422	MS.gene23372	0.838022	3.68E-57	-1.69E-46
MS.gene056191	MS.gene23372	0.804462	2.14E-49	-1.69E-46
MS.gene05702	MS.gene23372	0.806384	8.44E-50	-1.69E-46
MS.gene057448	MS.gene23372	0.807102	5.95E-50	-1.69E-46
MS.gene057450	MS.gene23372	0.818995	1.46E-52	-1.69E-46
MS.gene057754	MS.gene23372	0.814332	1.63E-51	-1.69E-46
MS.gene057779	MS.gene23372	0.841965	3.45E-58	-1.69E-46
MS.gene057782	MS.gene23372	0.822404	2.41E-53	-1.69E-46
MS.gene058002	MS.gene23372	0.813449	2.55E-51	-1.69E-46
MS.gene05811	MS.gene23372	0.803276	3.77E-49	-1.69E-46
MS.gene058168	MS.gene23372	0.800999	1.11E-48	-1.69E-46
MS.gene058845	MS.gene23372	0.804895	1.73E-49	-1.69E-46
MS.gene05907	MS.gene23372	0.80287	4.57E-49	-1.69E-46
MS.gene059228	MS.gene23372	0.821575	3.75E-53	-1.69E-46
MS.gene059518	MS.gene23372	0.810464	1.14E-50	-1.69E-46
MS.gene06037	MS.gene23372	0.874002	9.49E-68	-1.69E-46
MS.gene060476	MS.gene23372	0.824525	7.70E-54	-1.69E-46
MS.gene061049	MS.gene23372	0.838141	3.43E-57	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene003582	MS.gene23372	PPI
MS.gene23372	MS.gene50653	PPI
MS.gene23372	MS.gene003598	PPI
MS.gene23372	MS.gene70685	PPI
MS.gene23372	MS.gene50690	PPI
MS.gene50674	MS.gene23372	PPI
MS.gene23372	MS.gene062941	PPI
MS.gene057806	MS.gene23372	PPI
MS.gene057809	MS.gene23372	PPI
MS.gene062966	MS.gene23372	PPI
MS.gene50673	MS.gene23372	PPI
MS.gene23372	MS.gene057799	PPI
MS.gene23372	MS.gene50688	PPI
MS.gene23372	MS.gene003630	PPI
MS.gene23372	MS.gene057779	PPI
MS.gene23372	MS.gene062980	PPI
MS.gene003597	MS.gene23372	PPI
MS.gene23372	MS.gene003610	PPI
MS.gene003593	MS.gene23372	PPI
MS.gene23372	MS.gene50771	PPI
MS.gene062972	MS.gene23372	PPI
MS.gene23372	MS.gene022358	PPI
MS.gene003628	MS.gene23372	PPI
MS.gene23372	MS.gene057802	PPI
MS.gene23372	MS.gene057796	PPI
MS.gene003580	MS.gene23372	PPI
MS.gene23372	MS.gene50682	PPI
MS.gene057800	MS.gene23372	PPI
MS.gene23372	MS.gene057780	PPI
MS.gene23372	MS.gene057788	PPI
MS.gene23372	MS.gene062944	PPI
MS.gene50772	MS.gene23372	PPI
MS.gene23372	MS.gene50658	PPI
MS.gene23372	MS.gene50655	PPI
MS.gene23372	MS.gene28863	PPI
MS.gene23372	MS.gene50685	PPI
MS.gene23372	MS.gene003613	PPI
MS.gene23372	MS.gene003584	PPI
MS.gene23372	MS.gene057791	PPI
MS.gene057783	MS.gene23372	PPI
MS.gene062978	MS.gene23372	PPI
MS.gene23372	MS.gene062965	PPI
MS.gene23372	MS.gene50666	PPI
MS.gene50662	MS.gene23372	PPI
MS.gene50683	MS.gene23372	PPI
MS.gene057807	MS.gene23372	PPI
MS.gene23372	MS.gene062953	PPI
MS.gene23372	MS.gene23369	PPI
MS.gene23372	MS.gene062986	PPI
MS.gene003585	MS.gene23372	PPI
MS.gene23372	MS.gene50770	PPI
MS.gene23372	MS.gene062987	PPI
MS.gene23372	MS.gene057811	PPI
MS.gene23372	MS.gene057817	PPI
MS.gene23372	MS.gene70684	PPI
MS.gene23372	MS.gene062964	PPI
MS.gene057816	MS.gene23372	PPI
MS.gene003603	MS.gene23372	PPI
MS.gene062946	MS.gene23372	PPI
MS.gene23372	MS.gene057777	PPI
MS.gene23372	MS.gene062945	PPI
MS.gene23372	MS.gene057804	PPI
MS.gene23372	MS.gene003579	PPI
MS.gene23372	MS.gene062989	PPI
MS.gene23372	MS.gene50651	PPI
MS.gene23372	MS.gene003607	PPI
MS.gene062954	MS.gene23372	PPI
MS.gene50657	MS.gene23372	PPI
MS.gene23372	MS.gene50656	PPI
MS.gene23372	MS.gene50686	PPI
MS.gene23372	MS.gene70683	PPI
MS.gene062962	MS.gene23372	PPI
MS.gene062975	MS.gene23372	PPI
MS.gene23372	MS.gene062985	PPI
MS.gene23372	MS.gene057784	PPI
MS.gene50689	MS.gene23372	PPI
MS.gene23372	MS.gene50669	PPI
MS.gene77525	MS.gene23372	PPI
MS.gene003576	MS.gene23372	PPI
MS.gene23372	MS.gene003622	PPI
MS.gene062969	MS.gene23372	PPI
MS.gene057782	MS.gene23372	PPI
MS.gene23372	MS.gene003599	PPI
MS.gene003606	MS.gene23372	PPI
MS.gene23372	MS.gene23368	PPI
MS.gene23372	MS.gene50660	PPI
MS.gene23372	MS.gene003623	PPI
MS.gene003626	MS.gene23372	PPI
MS.gene23372	MS.gene50668	PPI
MS.gene23372	MS.gene003581	PPI
MS.gene23372	MS.gene062958	PPI
MS.gene23372	MS.gene057798	PPI
MS.gene23372	MS.gene003612	PPI
MS.gene062970	MS.gene23372	PPI
MS.gene23372	MS.gene057794	PPI
MS.gene23372	MS.gene003629	PPI
MS.gene23372	MS.gene062983	PPI
MS.gene057805	MS.gene23372	PPI
MS.gene062942	MS.gene23372	PPI
MS.gene003605	MS.gene23372	PPI
MS.gene23372	MS.gene062967	PPI
MS.gene23372	MS.gene23367	PPI
MS.gene23372	MS.gene062940	PPI
MS.gene062971	MS.gene23372	PPI
MS.gene23373	MS.gene23372	PPI
MS.gene23372	MS.gene003595	PPI
MS.gene23372	MS.gene062959	PPI
MS.gene23372	MS.gene50664	PPI
MS.gene23372	MS.gene057785	PPI
MS.gene23372	MS.gene50773	PPI
MS.gene23372	MS.gene50670	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23372.t1	MTR_4g072300	89.011	91	10	0	1	91	1	91	1.08e-57	172
MS.gene23372.t1	MTR_4g072240	87.912	91	11	0	1	91	1	91	1.38e-56	169
MS.gene23372.t1	MTR_4g072220	86.813	91	12	0	1	91	1	91	2.43e-55	166
MS.gene23372.t1	MTR_4g072260	84.615	91	14	0	1	91	1	91	9.50e-55	164
MS.gene23372.t1	MTR_4g072890	84.615	91	14	0	1	91	1	91	1.26e-54	164
MS.gene23372.t1	MTR_4g072870	83.516	91	15	0	1	91	1	91	2.84e-53	161
MS.gene23372.t1	MTR_4g072500	70.330	91	26	1	1	91	1	90	5.81e-45	140
MS.gene23372.t1	MTR_4g072310	68.132	91	29	0	1	91	1	91	1.14e-44	139
MS.gene23372.t1	MTR_3g084150	71.429	91	25	1	1	91	1	90	2.15e-44	138
MS.gene23372.t1	MTR_3g110038	73.626	91	23	1	1	91	1	90	2.85e-44	138
MS.gene23372.t1	MTR_3g084240	72.527	91	24	1	1	91	1	90	3.52e-44	138
MS.gene23372.t1	MTR_4g072640	70.330	91	26	1	1	91	1	90	4.38e-44	137
MS.gene23372.t1	MTR_4g072370	70.330	91	24	1	1	91	1	88	4.92e-44	137
MS.gene23372.t1	MTR_4g072570	70.330	91	26	1	1	91	1	90	7.83e-44	137
MS.gene23372.t1	MTR_4g072330	70.330	91	24	1	1	91	1	88	1.26e-43	136
MS.gene23372.t1	MTR_3g084170	72.527	91	24	1	1	91	1	90	1.63e-43	136
MS.gene23372.t1	MTR_3g084180	70.330	91	26	1	1	91	1	90	1.95e-43	136
MS.gene23372.t1	MTR_4g072530	68.132	91	28	1	1	91	1	90	2.55e-43	135
MS.gene23372.t1	MTR_8g461410	69.231	91	27	1	1	91	1	90	7.03e-43	135
MS.gene23372.t1	MTR_4g072280	82.667	75	13	0	1	75	1	75	1.69e-42	133
MS.gene23372.t1	MTR_4g072880	67.033	91	30	0	1	91	1	91	2.24e-42	133
MS.gene23372.t1	MTR_4g072250	69.231	91	27	1	1	91	1	90	2.48e-42	133
MS.gene23372.t1	MTR_4g072740	70.330	91	21	1	1	91	1	85	2.96e-42	133
MS.gene23372.t1	MTR_3g084250	70.330	91	26	1	1	91	1	90	3.34e-42	133
MS.gene23372.t1	MTR_4g072230	67.033	91	28	1	1	91	1	89	4.92e-42	132
MS.gene23372.t1	MTR_4g050700	69.231	91	28	0	1	91	1	91	5.27e-42	132
MS.gene23372.t1	MTR_2g012410	69.231	91	28	0	1	91	1	91	5.27e-42	132
MS.gene23372.t1	MTR_3g117630	68.182	88	28	0	4	91	3	90	3.61e-41	130
MS.gene23372.t1	MTR_3g084220	69.231	91	27	1	1	91	1	90	5.78e-41	130
MS.gene23372.t1	MTR_4g072830	68.889	90	25	1	1	90	1	87	6.15e-41	130
MS.gene23372.t1	MTR_4g072480	67.033	91	29	1	1	91	1	90	6.24e-41	130
MS.gene23372.t1	MTR_3g110032	65.934	91	31	0	1	91	1	91	7.92e-41	129
MS.gene23372.t1	MTR_4g072630	68.132	91	24	1	1	91	1	86	1.44e-40	129
MS.gene23372.t1	MTR_4g072580	67.033	91	24	1	1	91	1	85	2.98e-40	128
MS.gene23372.t1	MTR_4g072600	68.132	91	23	1	1	91	1	85	3.59e-40	127
MS.gene23372.t1	MTR_4g072860	64.835	91	32	0	1	91	1	91	6.80e-40	127
MS.gene23372.t1	MTR_4g072270	63.736	91	33	0	1	91	1	91	1.71e-39	126
MS.gene23372.t1	MTR_4g072730	63.736	91	32	1	1	91	1	90	2.11e-39	126
MS.gene23372.t1	MTR_4g072820	67.033	91	24	1	1	91	1	85	2.46e-39	125
MS.gene23372.t1	MTR_4g072620	63.736	91	32	1	1	91	1	90	2.63e-39	125
MS.gene23372.t1	MTR_3g110042	67.778	90	28	1	1	90	1	89	3.35e-39	125
MS.gene23372.t1	MTR_3g084260	65.934	91	31	0	1	91	1	91	3.64e-39	125
MS.gene23372.t1	MTR_4g072490	65.934	91	25	1	1	91	1	85	1.99e-38	123
MS.gene23372.t1	MTR_4g072680	62.637	91	33	1	1	91	1	90	2.00e-38	123
MS.gene23372.t1	MTR_4g072470	64.835	91	26	1	1	91	1	85	5.21e-38	122
MS.gene23372.t1	MTR_4g072850	67.391	92	29	1	1	91	1	92	1.16e-37	121
MS.gene23372.t1	MTR_4g072660	62.637	91	28	1	1	91	1	85	2.62e-37	120
MS.gene23372.t1	MTR_4g072610	63.736	91	26	1	1	91	1	84	4.31e-37	120
MS.gene23372.t1	MTR_4g072460	61.538	91	34	1	1	91	1	90	4.50e-37	120
MS.gene23372.t1	MTR_3g084190	71.429	91	25	1	1	91	1	90	9.28e-37	119
MS.gene23372.t1	MTR_3g084210	69.231	91	27	1	1	91	1	90	1.12e-36	119
MS.gene23372.t1	MTR_4g072540	65.934	91	26	1	1	91	1	86	1.64e-36	118
MS.gene23372.t1	MTR_8g461420	70.330	91	26	1	1	91	1	90	1.66e-36	119
MS.gene23372.t1	MTR_3g084160	70.330	91	26	1	1	91	1	90	2.11e-36	118
MS.gene23372.t1	MTR_4g072465	62.637	91	29	1	1	91	1	86	2.33e-36	118
MS.gene23372.t1	MTR_4g072650	63.736	91	26	1	1	91	1	84	4.27e-36	117
MS.gene23372.t1	MTR_3g084230	70.330	91	26	1	1	91	1	90	5.02e-36	117
MS.gene23372.t1	MTR_4g072940	75.714	70	17	0	22	91	53	122	2.01e-35	117
MS.gene23372.t1	MTR_4g072670	63.736	91	28	1	1	91	1	86	2.34e-35	115
MS.gene23372.t1	MTR_4g072720	64.835	91	27	1	1	91	1	86	2.91e-35	115
MS.gene23372.t1	MTR_4g072510	64.835	91	27	1	1	91	1	86	3.17e-35	115
MS.gene23372.t1	MTR_3g110045	72.289	83	23	0	9	91	67	149	7.43e-35	116
MS.gene23372.t1	MTR_4g072590	68.293	82	26	0	10	91	4	85	1.02e-34	114
MS.gene23372.t1	MTR_5g008360	62.963	81	30	0	11	91	1	81	1.44e-33	111
MS.gene23372.t1	MTR_4g072380	63.043	92	27	2	1	91	1	86	3.44e-33	110
MS.gene23372.t1	MTR_4g072450	63.736	91	27	1	1	91	1	85	4.78e-33	109
MS.gene23372.t1	MTR_4g072690	63.736	91	27	1	1	91	1	85	6.87e-33	109
MS.gene23372.t1	MTR_3g084200	71.233	73	20	1	1	73	1	72	1.84e-32	108
MS.gene23372.t1	MTR_5g008370	74.627	67	17	0	25	91	24	90	1.89e-32	110
MS.gene23372.t1	MTR_4g072910	62.353	85	31	1	7	91	17	100	4.05e-32	108
MS.gene23372.t1	MTR_4g072550	59.770	87	34	1	6	91	15	101	6.50e-32	107
MS.gene23372.t1	MTR_5g008350	62.500	80	24	1	1	80	1	74	5.36e-31	104
MS.gene23372.t1	MTR_4g072770	68.182	66	21	0	26	91	15	80	2.28e-30	103
MS.gene23372.t1	MTR_4g072980	61.538	78	28	2	14	90	16	92	7.38e-30	102
MS.gene23372.t1	MTR_4g072560	63.636	66	23	1	26	90	32	97	1.49e-28	99.0
MS.gene23372.t1	MTR_3g117640	63.235	68	24	1	25	91	33	100	2.51e-28	98.6
MS.gene23372.t1	MTR_4g072930	48.039	102	42	2	1	91	9	110	6.14e-28	97.8
MS.gene23372.t1	MTR_4g072750	65.333	75	23	2	1	73	1	74	3.49e-27	95.1
MS.gene23372.t1	MTR_4g072290	51.648	91	30	1	1	91	1	77	8.56e-27	94.0
MS.gene23372.t1	MTR_3g110035	53.571	84	33	1	8	91	59	136	2.66e-25	92.0
MS.gene23372.t1	MTR_3g113310	56.716	67	28	1	24	90	40	105	5.38e-24	87.8
MS.gene23372.t1	MTR_6g077850	52.239	67	32	0	25	91	33	99	1.77e-23	86.3
MS.gene23372.t1	MTR_3g117610	58.462	65	26	1	24	88	43	106	2.19e-22	83.6
MS.gene23372.t1	MTR_4g072190	51.316	76	36	1	15	90	25	99	7.60e-22	82.0
MS.gene23372.t1	MTR_2g043960	53.086	81	36	2	4	83	53	132	3.52e-21	82.0
MS.gene23372.t1	MTR_4g124750	50.000	86	41	2	4	88	46	130	4.95e-21	81.6
MS.gene23372.t1	MTR_8g461400	49.451	91	19	2	1	91	1	64	6.44e-21	78.6
MS.gene23372.t1	MTR_5g021820	47.619	84	40	3	10	90	21	103	9.53e-20	76.6
MS.gene23372.t1	MTR_8g076040	54.688	64	28	1	25	88	40	102	3.07e-19	75.5
MS.gene23372.t1	MTR_4g025830	50.704	71	31	2	23	90	76	145	7.13e-18	73.6
MS.gene23372.t1	MTR_3g092220	44.156	77	40	2	9	83	16	91	8.14e-18	72.0
MS.gene23372.t1	MTR_4g072160	44.578	83	45	1	4	86	15	96	9.06e-18	72.8
MS.gene23372.t1	MTR_1g009150	52.239	67	31	1	17	83	62	127	1.93e-17	72.8
MS.gene23372.t1	MTR_4g005310	52.381	63	29	1	25	86	61	123	2.38e-17	72.0
MS.gene23372.t1	MTR_0388s0020	42.529	87	45	3	7	90	57	141	4.11e-17	71.2
MS.gene23372.t1	MTR_4g072840	47.253	91	17	3	1	91	1	60	6.22e-17	68.6
MS.gene23372.t1	MTR_7g118010	48.529	68	32	2	26	91	23	89	9.97e-17	69.3
MS.gene23372.t1	MTR_1g094750	45.679	81	40	2	9	86	30	109	1.61e-16	68.9
MS.gene23372.t1	MTR_1g024085	46.250	80	31	2	4	83	26	93	2.92e-16	68.9
MS.gene23372.t1	MTR_1g061570	54.237	59	26	1	25	83	18	75	1.50e-15	66.6
MS.gene23372.t1	MTR_8g026730	45.588	68	34	2	26	91	27	93	1.72e-15	66.2
MS.gene23372.t1	MTR_7g101740	48.438	64	32	1	25	88	39	101	2.55e-15	65.9
MS.gene23372.t1	MTR_3g109160	48.684	76	38	1	8	83	51	125	2.74e-15	67.0
MS.gene23372.t1	MTR_3g097120	45.570	79	34	2	21	91	4	81	2.88e-15	65.5
MS.gene23372.t1	MTR_4g005320	51.724	58	27	1	26	83	70	126	1.43e-14	65.1
MS.gene23372.t1	MTR_1g063950	45.161	62	33	1	25	86	47	107	1.59e-14	63.9
MS.gene23372.t1	MTR_7g405740	49.180	61	30	1	26	86	67	126	1.60e-14	65.1
MS.gene23372.t1	MTR_1g059770	42.188	64	36	1	27	90	50	112	6.73e-14	62.4
MS.gene23372.t1	MTR_8g461210	47.458	59	30	1	25	83	34	91	1.17e-13	61.6
MS.gene23372.t1	MTR_8g101520	44.615	65	35	1	27	91	51	114	8.37e-13	60.5
MS.gene23372.t1	MTR_8g094980	43.038	79	31	2	25	90	2	79	8.56e-13	59.3
MS.gene23372.t1	MTR_7g104950	40.323	62	36	1	29	90	53	113	8.74e-13	59.7
MS.gene23372.t1	MTR_3g098970	34.884	86	53	2	8	91	33	117	1.45e-12	59.7
MS.gene23372.t1	MTR_2g066830	39.189	74	34	2	5	78	47	109	1.49e-12	59.3
MS.gene23372.t1	MTR_4g021810	47.059	68	33	3	17	83	18	83	1.67e-12	58.5
MS.gene23372.t1	MTR_8g096440	38.158	76	46	1	10	85	29	103	1.69e-12	59.3
MS.gene23372.t1	MTR_8g096470	43.333	60	33	1	27	86	47	105	1.78e-12	58.5
MS.gene23372.t1	MTR_7g104940	37.333	75	42	2	16	90	44	113	3.94e-12	58.2
MS.gene23372.t1	MTR_8g096500	45.763	59	31	1	27	85	50	107	1.45e-11	57.0
MS.gene23372.t1	MTR_3g105900	66.667	36	12	0	25	60	1171	1206	1.49e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23372.t1	AT4G38840	73.529	68	17	1	25	91	32	99	1.45e-33	111
MS.gene23372.t1	AT2G21210	53.684	95	40	2	1	91	1	95	1.44e-32	109
MS.gene23372.t1	AT5G18080	62.667	75	27	1	17	90	15	89	8.20e-32	107
MS.gene23372.t1	AT2G21210	53.684	95	40	2	1	91	68	162	8.24e-32	109
MS.gene23372.t1	AT3G03820	56.989	93	34	2	2	91	6	95	1.43e-30	103
MS.gene23372.t1	AT5G18020	58.667	75	30	1	17	90	15	89	1.59e-30	103
MS.gene23372.t1	AT5G18060	68.182	66	20	1	27	91	25	90	1.78e-30	103
MS.gene23372.t1	AT2G21200	63.889	72	25	1	20	90	15	86	6.06e-30	102
MS.gene23372.t1	AT5G18050	66.667	66	21	1	26	90	24	89	6.35e-30	102
MS.gene23372.t1	AT4G38825	61.333	75	28	1	18	91	15	89	6.52e-30	102
MS.gene23372.t1	AT5G18010	57.895	76	31	1	17	91	15	90	9.63e-30	101
MS.gene23372.t1	AT5G18030	60.811	74	28	1	19	91	15	88	1.28e-29	101
MS.gene23372.t1	AT4G34800	52.809	89	34	2	1	86	1	84	4.53e-29	100
MS.gene23372.t1	AT3G03840	62.500	72	25	1	22	91	23	94	9.19e-29	99.4
MS.gene23372.t1	AT4G34770	58.333	84	30	2	10	91	22	102	1.41e-28	99.4
MS.gene23372.t1	AT3G03850	65.672	67	21	1	27	91	26	92	5.71e-28	97.4
MS.gene23372.t1	AT4G38850	61.765	68	23	1	27	91	22	89	7.16e-28	97.1
MS.gene23372.t1	AT4G34810	61.429	70	22	2	26	90	48	117	1.93e-26	94.4
MS.gene23372.t1	AT4G34790	63.077	65	22	1	26	88	39	103	6.68e-26	92.4
MS.gene23372.t1	AT3G03830	58.571	70	26	1	25	91	23	92	2.75e-25	90.5
MS.gene23372.t1	AT4G34780	62.319	69	23	2	26	91	28	96	3.29e-25	90.9
MS.gene23372.t1	AT4G13790	50.685	73	34	1	20	90	19	91	4.50e-25	90.1
MS.gene23372.t1	AT4G38860	54.412	68	31	0	24	91	38	105	1.69e-22	84.0
MS.gene23372.t1	AT1G75580	48.889	90	38	2	8	90	19	107	1.20e-21	81.6
MS.gene23372.t1	AT3G43120	53.623	69	31	1	15	83	68	135	3.12e-21	82.0
MS.gene23372.t1	AT5G20810	55.882	68	29	1	16	83	69	135	8.86e-21	81.3
MS.gene23372.t1	AT5G20810	55.882	68	29	1	16	83	69	135	1.53e-20	81.3
MS.gene23372.t1	AT4G34760	53.731	67	30	1	24	90	41	106	1.65e-20	79.0
MS.gene23372.t1	AT2G21220	53.030	66	30	1	25	90	39	103	1.84e-20	78.6
MS.gene23372.t1	AT1G19830	53.731	67	30	1	24	90	46	111	2.23e-19	76.3
MS.gene23372.t1	AT5G66260	54.545	66	29	1	26	91	34	98	1.92e-18	73.6
MS.gene23372.t1	AT4G36110	53.125	64	29	1	25	88	39	101	5.81e-18	72.4
MS.gene23372.t1	AT2G16580	53.846	65	29	1	24	88	42	105	8.83e-18	72.0
MS.gene23372.t1	AT2G18010	53.125	64	29	1	25	88	47	109	1.83e-17	71.2
MS.gene23372.t1	AT3G20220	52.308	65	29	2	26	89	47	110	3.83e-17	70.5
MS.gene23372.t1	AT3G51200	48.148	81	40	2	7	86	20	99	3.94e-17	70.1
MS.gene23372.t1	AT2G37030	49.206	63	31	1	25	87	48	109	1.75e-16	68.9
MS.gene23372.t1	AT1G75590	54.237	59	26	1	25	83	41	98	2.36e-16	69.7
MS.gene23372.t1	AT5G10990	52.542	59	27	1	25	83	40	97	6.10e-16	68.2
MS.gene23372.t1	AT3G60690	47.059	68	32	2	26	90	88	154	6.51e-16	68.9
MS.gene23372.t1	AT2G45210	43.836	73	37	2	21	90	74	145	8.35e-16	68.2
MS.gene23372.t1	AT1G19840	54.237	59	26	1	25	83	40	97	9.37e-16	67.8
MS.gene23372.t1	AT3G61900	38.947	95	52	3	2	91	4	97	1.24e-15	67.4
MS.gene23372.t1	AT4G12410	50.000	68	30	2	26	90	76	142	1.41e-15	67.8
MS.gene23372.t1	AT3G53250	46.032	63	30	1	25	87	51	109	6.18e-15	65.1
MS.gene23372.t1	AT2G46690	47.826	69	32	2	18	83	16	83	7.01e-15	65.1
MS.gene23372.t1	AT3G53250	46.032	63	30	1	25	87	82	140	1.02e-14	65.5
MS.gene23372.t1	AT4G00880	55.738	61	24	2	25	83	27	86	1.27e-14	64.3
MS.gene23372.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.36e-14	65.1
MS.gene23372.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.36e-14	65.1
MS.gene23372.t1	AT4G22620	45.588	68	33	2	26	90	79	145	6.33e-14	63.5
MS.gene23372.t1	AT3G12830	48.438	64	28	2	15	78	43	101	1.58e-13	61.6
MS.gene23372.t1	AT4G31320	44.737	76	35	2	8	83	68	136	4.89e-13	61.6
MS.gene23372.t1	AT5G53590	40.278	72	37	2	25	91	45	115	4.91e-13	60.8
MS.gene23372.t1	AT2G24400	51.724	58	27	1	26	83	64	120	1.26e-12	60.5
MS.gene23372.t1	AT3G03847	40.000	85	48	3	3	86	48	130	2.21e-12	58.9
MS.gene23372.t1	AT1G56150	42.424	66	37	1	26	91	38	102	3.63e-12	57.8
MS.gene23372.t1	AT4G09530	41.096	73	40	2	17	86	19	91	5.87e-12	57.0
MS.gene23372.t1	AT5G03310	44.118	68	31	3	25	86	38	104	2.59e-11	55.5
MS.gene23372.t1	AT1G16510	40.000	65	38	1	26	90	54	117	4.91e-11	55.5

Find 18 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCAAGCAGAAGAAGAATT+TGG	0.279041	4.4:+36901498	MS.gene23372:CDS
TGTAGTAATTCTTGAAATAA+TGG	0.319917	4.4:-36901477	None:intergenic
GGTTGGTTCAAGTATGATAC+TGG	0.408482	4.4:-36901456	None:intergenic
TAGACTGCAAGATAGCCTTT+TGG	0.442040	4.4:-36901402	None:intergenic
TTTGGATATGATCATCCAAC+GGG	0.502771	4.4:+36901516	MS.gene23372:CDS
GTAATTCTTGAAATAATGGT+TGG	0.504955	4.4:-36901473	None:intergenic
GGCTATCTTGCAGTCTACGT+TGG	0.536328	4.4:+36901408	MS.gene23372:CDS
AAGGGATTCGAAGTCCCAAA+AGG	0.563694	4.4:+36901387	MS.gene23372:CDS
CTCAACACAAACATCTAGCA+AGG	0.567306	4.4:+36901368	MS.gene23372:CDS
GTTTGTGTTGAGGAAAATGA+TGG	0.569824	4.4:-36901357	None:intergenic
CTTGCTAGATGTTTGTGTTG+AGG	0.597187	4.4:-36901367	None:intergenic
AAGAAAGTATCTTCACTGCA+AGG	0.617328	4.4:-36901552	None:intergenic
TCTACGTTGGAGATCAAATG+AGG	0.626265	4.4:+36901421	MS.gene23372:CDS
ATTTGGATATGATCATCCAA+CGG	0.627068	4.4:+36901515	MS.gene23372:CDS
GGAATTGTGAGACCTCCCGT+TGG	0.646900	4.4:-36901531	None:intergenic
TCAACACAAACATCTAGCAA+GGG	0.670347	4.4:+36901369	MS.gene23372:CDS
GGATATGATCATCCAACGGG+AGG	0.675863	4.4:+36901519	MS.gene23372:CDS
ACGTTGGAGATCAAATGAGG+CGG	0.704375	4.4:+36901424	MS.gene23372:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTAGTAATTCTTGAAATAA+TGG	-	chr4.4:36901480-36901499	None:intergenic	20.0%
!	GTAATTCTTGAAATAATGGT+TGG	-	chr4.4:36901476-36901495	None:intergenic	25.0%
	ATTTGGATATGATCATCCAA+CGG	+	chr4.4:36901515-36901534	MS.gene23372:CDS	30.0%
	CATCAAGCAGAAGAAGAATT+TGG	+	chr4.4:36901498-36901517	MS.gene23372:CDS	35.0%
	GTTTGTGTTGAGGAAAATGA+TGG	-	chr4.4:36901360-36901379	None:intergenic	35.0%
	TCAACACAAACATCTAGCAA+GGG	+	chr4.4:36901369-36901388	MS.gene23372:CDS	35.0%
	TTTGGATATGATCATCCAAC+GGG	+	chr4.4:36901516-36901535	MS.gene23372:CDS	35.0%
!!	AAGAAAGTATCTTCACTGCA+AGG	-	chr4.4:36901555-36901574	None:intergenic	35.0%
	CTCAACACAAACATCTAGCA+AGG	+	chr4.4:36901368-36901387	MS.gene23372:CDS	40.0%
	CTTGCTAGATGTTTGTGTTG+AGG	-	chr4.4:36901370-36901389	None:intergenic	40.0%
	TCTACGTTGGAGATCAAATG+AGG	+	chr4.4:36901421-36901440	MS.gene23372:CDS	40.0%
!	AGACTGCAAGATAGCCTTTT+GGG	-	chr4.4:36901404-36901423	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+TGG	-	chr4.4:36901459-36901478	None:intergenic	40.0%
!	TAGACTGCAAGATAGCCTTT+TGG	-	chr4.4:36901405-36901424	None:intergenic	40.0%
	AAGGGATTCGAAGTCCCAAA+AGG	+	chr4.4:36901387-36901406	MS.gene23372:CDS	45.0%
	ACGTTGGAGATCAAATGAGG+CGG	+	chr4.4:36901424-36901443	MS.gene23372:CDS	45.0%
	GGATATGATCATCCAACGGG+AGG	+	chr4.4:36901519-36901538	MS.gene23372:CDS	50.0%
	GGCTATCTTGCAGTCTACGT+TGG	+	chr4.4:36901408-36901427	MS.gene23372:CDS	50.0%
	GGAATTGTGAGACCTCCCGT+TGG	-	chr4.4:36901534-36901553	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36901324	36901599	36901324	ID=MS.gene23372
chr4.4	mRNA	36901324	36901599	36901324	ID=MS.gene23372.t1;Parent=MS.gene23372
chr4.4	exon	36901324	36901599	36901324	ID=MS.gene23372.t1.exon1;Parent=MS.gene23372.t1
chr4.4	CDS	36901324	36901599	36901324	ID=cds.MS.gene23372.t1;Parent=MS.gene23372.t1

Gene Sequence	>MS.gene23372 ATGGGTTTTCGCATAGCAAAGCTTATCAGAATGCCATCATTTTCCTCAACACAAACATCTAGCAAGGGATTCGAAGTCCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATCAAATGAGGCGGTTTGTGATTCCAGTATCATACTTGAACCAACCATTATTTCAAGAATTACTACATCAAGCAGAAGAAGAATTTGGATATGATCATCCAACGGGAGGTCTCACAATTCCTTGCAGTGAAGATACTTTCTTACAACTGACTTCTCGCTTGAATTGA
Protein sequence	>MS.gene23372.t1 MGFRIAKLIRMPSFSSTQTSSKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPLFQELLHQAEEEFGYDHPTGGLTIPCSEDTFLQLTSRLN