AlfalfaGEDB | MS.gene50675

M. sativa cultivar XinJiangDaYe / MS.gene50675

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50675.t1	GAU32267.1	90.5	84	8	0	1	84	1	84	2.90E-37	164.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50675.t1	P33081	75.0	84	19	1	1	84	1	82	7.8e-31	134.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50675.t1	A0A2Z6NQN8	90.5	84	8	0	1	84	1	84	2.1e-37	164.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50675	MS.gene062944	PPI
MS.gene50675	MS.gene50658	PPI
MS.gene50662	MS.gene50675	PPI
MS.gene50675	MS.gene057777	PPI
MS.gene50675	MS.gene50655	PPI
MS.gene50675	MS.gene28863	PPI
MS.gene003628	MS.gene50675	PPI
MS.gene50675	MS.gene062945	PPI
MS.gene057807	MS.gene50675	PPI
MS.gene50675	MS.gene057804	PPI
MS.gene50675	MS.gene50651	PPI
MS.gene003585	MS.gene50675	PPI
MS.gene50675	MS.gene50656	PPI
MS.gene50675	MS.gene70683	PPI
MS.gene057816	MS.gene50675	PPI
MS.gene003603	MS.gene50675	PPI
MS.gene50675	MS.gene50666	PPI
MS.gene062946	MS.gene50675	PPI
MS.gene50675	MS.gene062985	PPI
MS.gene50675	MS.gene057784	PPI
MS.gene50675	MS.gene50653	PPI
MS.gene50675	MS.gene062953	PPI
MS.gene50675	MS.gene003622	PPI
MS.gene50675	MS.gene003599	PPI
MS.gene50675	MS.gene23368	PPI
MS.gene062954	MS.gene50675	PPI
MS.gene50657	MS.gene50675	PPI
MS.gene50675	MS.gene057817	PPI
MS.gene50675	MS.gene50668	PPI
MS.gene50675	MS.gene003581	PPI
MS.gene50675	MS.gene70684	PPI
MS.gene062962	MS.gene50675	PPI
MS.gene50675	MS.gene062958	PPI
MS.gene50675	MS.gene057798	PPI
MS.gene50675	MS.gene003612	PPI
MS.gene50675	MS.gene062983	PPI
MS.gene50683	MS.gene50675	PPI
MS.gene77525	MS.gene50675	PPI
MS.gene003576	MS.gene50675	PPI
MS.gene50675	MS.gene062967	PPI
MS.gene50675	MS.gene003579	PPI
MS.gene062969	MS.gene50675	PPI
MS.gene50675	MS.gene062940	PPI
MS.gene057782	MS.gene50675	PPI
MS.gene50675	MS.gene062989	PPI
MS.gene50675	MS.gene003595	PPI
MS.gene50675	MS.gene062959	PPI
MS.gene50675	MS.gene003607	PPI
MS.gene003626	MS.gene50675	PPI
MS.gene50675	MS.gene50686	PPI
MS.gene50675	MS.gene50664	PPI
MS.gene50675	MS.gene057785	PPI
MS.gene50675	MS.gene50670	PPI
MS.gene057805	MS.gene50675	PPI
MS.gene062942	MS.gene50675	PPI
MS.gene003605	MS.gene50675	PPI
MS.gene50675	MS.gene50669	PPI
MS.gene50675	MS.gene70685	PPI
MS.gene50675	MS.gene062941	PPI
MS.gene062971	MS.gene50675	PPI
MS.gene23373	MS.gene50675	PPI
MS.gene50675	MS.gene50660	PPI
MS.gene50675	MS.gene003623	PPI
MS.gene062975	MS.gene50675	PPI
MS.gene50675	MS.gene057799	PPI
MS.gene50675	MS.gene057794	PPI
MS.gene50675	MS.gene50688	PPI
MS.gene50675	MS.gene003629	PPI
MS.gene50689	MS.gene50675	PPI
MS.gene50674	MS.gene50675	PPI
MS.gene50675	MS.gene062980	PPI
MS.gene50675	MS.gene23367	PPI
MS.gene50675	MS.gene003610	PPI
MS.gene003606	MS.gene50675	PPI
MS.gene057806	MS.gene50675	PPI
MS.gene057809	MS.gene50675	PPI
MS.gene50675	MS.gene057802	PPI
MS.gene50675	MS.gene50773	PPI
MS.gene50675	MS.gene057796	PPI
MS.gene50673	MS.gene50675	PPI
MS.gene50675	MS.gene50682	PPI
MS.gene062970	MS.gene50675	PPI
MS.gene50675	MS.gene003598	PPI
MS.gene50675	MS.gene50690	PPI
MS.gene003597	MS.gene50675	PPI
MS.gene50675	MS.gene057780	PPI
MS.gene50675	MS.gene057788	PPI
MS.gene003593	MS.gene50675	PPI
MS.gene062972	MS.gene50675	PPI
MS.gene50675	MS.gene50685	PPI
MS.gene50675	MS.gene003613	PPI
MS.gene50675	MS.gene003584	PPI
MS.gene50675	MS.gene057791	PPI
MS.gene003580	MS.gene50675	PPI
MS.gene003582	MS.gene50675	PPI
MS.gene50675	MS.gene003630	PPI
MS.gene057800	MS.gene50675	PPI
MS.gene50675	MS.gene057779	PPI
MS.gene50675	MS.gene062965	PPI
MS.gene50675	MS.gene50771	PPI
MS.gene50772	MS.gene50675	PPI
MS.gene50675	MS.gene022358	PPI
MS.gene062966	MS.gene50675	PPI
MS.gene057783	MS.gene50675	PPI
MS.gene50675	MS.gene23369	PPI
MS.gene062978	MS.gene50675	PPI
MS.gene50675	MS.gene062986	PPI
MS.gene50675	MS.gene50770	PPI
MS.gene50675	MS.gene062987	PPI
MS.gene50675	MS.gene057811	PPI
MS.gene50675	MS.gene062964	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50675.t1	MTR_4g072490	82.353	85	14	1	1	84	1	85	1.47e-47	146
MS.gene50675.t1	MTR_4g072610	77.907	86	19	0	1	86	1	86	3.77e-47	145
MS.gene50675.t1	MTR_4g072740	82.353	85	14	1	1	84	1	85	6.85e-47	144
MS.gene50675.t1	MTR_4g072650	77.907	86	19	0	1	86	1	86	2.00e-46	143
MS.gene50675.t1	MTR_4g072580	78.161	87	18	1	1	86	1	87	2.30e-46	143
MS.gene50675.t1	MTR_4g072470	81.176	85	15	1	1	84	1	85	4.99e-46	142
MS.gene50675.t1	MTR_4g072370	77.778	90	16	1	1	86	1	90	1.44e-45	141
MS.gene50675.t1	MTR_4g072600	77.011	87	19	1	1	86	1	87	3.28e-45	140
MS.gene50675.t1	MTR_4g072630	76.744	86	18	1	1	84	1	86	3.84e-44	137
MS.gene50675.t1	MTR_3g084150	71.111	90	20	1	1	84	1	90	8.31e-44	137
MS.gene50675.t1	MTR_4g072465	75.581	86	19	1	1	84	1	86	2.13e-43	135
MS.gene50675.t1	MTR_3g084180	70.000	90	21	1	1	84	1	90	6.54e-43	134
MS.gene50675.t1	MTR_8g461410	68.889	90	22	1	1	84	1	90	1.05e-42	134
MS.gene50675.t1	MTR_4g072330	73.333	90	20	2	1	86	1	90	8.86e-42	132
MS.gene50675.t1	MTR_4g072820	74.118	85	21	1	1	84	1	85	3.00e-41	130
MS.gene50675.t1	MTR_4g072590	80.000	85	16	1	1	84	1	85	3.08e-41	130
MS.gene50675.t1	MTR_4g072670	77.907	86	17	1	1	84	1	86	3.17e-41	130
MS.gene50675.t1	MTR_4g072830	75.862	87	17	1	1	83	1	87	4.91e-41	130
MS.gene50675.t1	MTR_4g072540	77.907	86	17	1	1	84	1	86	5.80e-41	129
MS.gene50675.t1	MTR_4g072720	77.907	86	17	1	1	84	1	86	6.92e-41	129
MS.gene50675.t1	MTR_3g084170	70.000	90	21	1	1	84	1	90	8.81e-41	129
MS.gene50675.t1	MTR_4g072510	75.581	86	19	1	1	84	1	86	4.05e-40	127
MS.gene50675.t1	MTR_3g110042	71.264	87	19	1	1	81	1	87	8.45e-40	127
MS.gene50675.t1	MTR_3g084240	68.889	90	22	1	1	84	1	90	1.03e-39	126
MS.gene50675.t1	MTR_4g072310	69.231	91	21	1	1	84	1	91	1.21e-39	126
MS.gene50675.t1	MTR_4g072880	68.132	91	22	1	1	84	1	91	1.94e-39	125
MS.gene50675.t1	MTR_3g117630	76.712	73	17	0	12	84	18	90	3.84e-39	125
MS.gene50675.t1	MTR_8g461420	67.778	90	23	1	1	84	1	90	6.02e-39	124
MS.gene50675.t1	MTR_3g084230	67.778	90	23	1	1	84	1	90	6.29e-39	124
MS.gene50675.t1	MTR_3g084190	66.667	90	24	1	1	84	1	90	6.43e-39	124
MS.gene50675.t1	MTR_4g072500	67.778	90	23	1	1	84	1	90	7.58e-39	124
MS.gene50675.t1	MTR_3g110038	66.667	90	24	1	1	84	1	90	8.36e-39	124
MS.gene50675.t1	MTR_3g084210	66.667	90	24	1	1	84	1	90	9.33e-39	124
MS.gene50675.t1	MTR_4g072870	65.934	91	24	2	1	84	1	91	1.06e-38	124
MS.gene50675.t1	MTR_3g084220	66.667	90	24	1	1	84	1	90	1.09e-38	124
MS.gene50675.t1	MTR_3g084250	65.556	90	25	1	1	84	1	90	1.90e-38	123
MS.gene50675.t1	MTR_4g050700	67.033	91	23	2	1	84	1	91	1.96e-38	123
MS.gene50675.t1	MTR_2g012410	67.033	91	23	2	1	84	1	91	1.96e-38	123
MS.gene50675.t1	MTR_4g072860	69.231	91	21	1	1	84	1	91	2.00e-38	123
MS.gene50675.t1	MTR_4g072850	66.667	93	23	1	1	85	1	93	3.46e-38	122
MS.gene50675.t1	MTR_4g072270	65.934	91	24	1	1	84	1	91	5.62e-38	122
MS.gene50675.t1	MTR_4g072640	67.778	90	23	1	1	84	1	90	9.97e-38	121
MS.gene50675.t1	MTR_4g072240	62.637	91	27	1	1	84	1	91	1.22e-37	121
MS.gene50675.t1	MTR_4g072480	64.444	90	26	1	1	84	1	90	1.33e-37	121
MS.gene50675.t1	MTR_4g072570	67.778	90	23	1	1	84	1	90	1.39e-37	121
MS.gene50675.t1	MTR_4g072250	69.231	91	20	2	1	84	1	90	1.43e-37	121
MS.gene50675.t1	MTR_4g072530	65.556	90	25	1	1	84	1	90	2.03e-37	120
MS.gene50675.t1	MTR_3g084160	65.556	90	25	1	1	84	1	90	2.35e-37	120
MS.gene50675.t1	MTR_3g110032	65.934	91	24	2	1	84	1	91	2.79e-37	120
MS.gene50675.t1	MTR_4g072890	61.538	91	28	1	1	84	1	91	3.13e-37	120
MS.gene50675.t1	MTR_4g072380	69.767	86	24	2	1	84	1	86	3.59e-37	120
MS.gene50675.t1	MTR_4g072620	63.333	90	27	1	1	84	1	90	1.07e-36	119
MS.gene50675.t1	MTR_4g072300	60.440	91	29	1	1	84	1	91	1.28e-36	119
MS.gene50675.t1	MTR_4g072680	63.333	90	27	1	1	84	1	90	1.86e-36	118
MS.gene50675.t1	MTR_4g072230	68.132	91	20	2	1	84	1	89	1.98e-36	118
MS.gene50675.t1	MTR_4g072260	60.440	91	29	1	1	84	1	91	2.67e-36	118
MS.gene50675.t1	MTR_4g072690	72.941	85	22	1	1	84	1	85	2.97e-36	117
MS.gene50675.t1	MTR_4g072220	60.440	91	29	1	1	84	1	91	3.47e-36	117
MS.gene50675.t1	MTR_4g072450	72.941	85	22	1	1	84	1	85	3.58e-36	117
MS.gene50675.t1	MTR_3g110045	67.045	88	23	1	3	84	62	149	3.87e-36	119
MS.gene50675.t1	MTR_3g084260	64.835	91	25	2	1	84	1	91	4.14e-36	117
MS.gene50675.t1	MTR_4g072730	62.222	90	28	1	1	84	1	90	7.42e-36	117
MS.gene50675.t1	MTR_5g008350	72.973	74	19	1	1	73	1	74	1.08e-35	116
MS.gene50675.t1	MTR_4g072660	63.529	85	30	1	1	84	1	85	2.98e-35	115
MS.gene50675.t1	MTR_4g072460	61.111	90	29	1	1	84	1	90	5.77e-35	114
MS.gene50675.t1	MTR_4g072770	67.059	85	24	2	1	85	1	81	1.15e-34	113
MS.gene50675.t1	MTR_5g008360	70.667	75	22	0	10	84	7	81	3.07e-34	112
MS.gene50675.t1	MTR_4g072940	63.736	91	25	1	3	85	33	123	3.21e-33	111
MS.gene50675.t1	MTR_5g008370	73.973	73	19	0	12	84	18	90	8.78e-33	110
MS.gene50675.t1	MTR_4g072980	52.632	95	36	2	1	86	1	95	3.46e-30	102
MS.gene50675.t1	MTR_4g072550	55.952	84	37	0	1	84	18	101	1.52e-29	101
MS.gene50675.t1	MTR_3g084200	66.667	72	18	1	1	66	1	72	1.53e-29	101
MS.gene50675.t1	MTR_4g072910	64.000	75	26	1	10	84	27	100	8.82e-29	99.4
MS.gene50675.t1	MTR_4g072560	51.546	97	33	3	1	83	1	97	4.12e-28	97.8
MS.gene50675.t1	MTR_3g117640	60.000	70	27	1	18	86	33	102	5.18e-28	97.4
MS.gene50675.t1	MTR_4g072750	63.514	74	19	1	1	66	1	74	3.34e-26	92.4
MS.gene50675.t1	MTR_4g072290	55.294	85	29	2	1	84	1	77	5.06e-26	91.7
MS.gene50675.t1	MTR_3g110035	62.295	61	23	0	24	84	76	136	6.01e-23	85.9
MS.gene50675.t1	MTR_4g072280	54.667	75	27	1	1	68	1	75	1.40e-22	83.2
MS.gene50675.t1	MTR_3g113310	52.941	68	31	1	17	84	40	106	1.60e-22	83.6
MS.gene50675.t1	MTR_3g117610	55.224	67	29	1	17	83	43	108	4.23e-22	82.8
MS.gene50675.t1	MTR_6g077850	52.174	69	33	0	16	84	31	99	8.61e-22	81.6
MS.gene50675.t1	MTR_4g072190	48.750	80	36	2	8	83	21	99	2.11e-21	80.9
MS.gene50675.t1	MTR_4g072930	55.072	69	27	1	20	84	42	110	4.07e-21	80.5
MS.gene50675.t1	MTR_4g072840	51.765	85	15	3	1	84	1	60	6.30e-20	75.9
MS.gene50675.t1	MTR_5g021820	51.515	66	31	1	18	83	39	103	2.27e-19	75.5
MS.gene50675.t1	MTR_8g076040	53.030	66	30	1	18	83	40	104	5.46e-19	74.7
MS.gene50675.t1	MTR_7g118010	44.186	86	41	3	2	85	10	90	3.11e-17	70.1
MS.gene50675.t1	MTR_3g092220	41.558	77	42	2	10	84	24	99	6.85e-17	69.7
MS.gene50675.t1	MTR_2g043960	54.237	59	26	1	18	76	75	132	2.52e-16	69.3
MS.gene50675.t1	MTR_8g461400	44.444	90	18	2	1	84	1	64	8.93e-16	65.5
MS.gene50675.t1	MTR_1g061570	52.055	73	32	2	9	79	7	78	2.84e-15	65.9
MS.gene50675.t1	MTR_4g124750	50.847	59	28	1	18	76	68	125	4.82e-15	65.9
MS.gene50675.t1	MTR_1g024085	46.575	73	34	2	4	76	26	93	5.35e-15	65.5
MS.gene50675.t1	MTR_1g094750	50.000	62	30	1	18	79	49	109	1.78e-14	63.5
MS.gene50675.t1	MTR_0388s0020	41.772	79	42	2	10	85	66	143	1.92e-14	64.3
MS.gene50675.t1	MTR_1g009150	43.836	73	40	1	11	83	63	134	4.39e-14	63.9
MS.gene50675.t1	MTR_7g405740	39.474	76	44	2	5	79	52	126	5.64e-14	63.2
MS.gene50675.t1	MTR_4g005310	46.774	62	32	1	19	79	62	123	6.08e-14	63.2
MS.gene50675.t1	MTR_7g101740	47.059	68	35	1	18	85	39	105	1.16e-13	61.2
MS.gene50675.t1	MTR_4g072160	47.761	67	32	2	18	83	36	100	1.40e-13	61.6
MS.gene50675.t1	MTR_8g026730	42.029	69	37	2	19	85	27	94	2.80e-13	60.1
MS.gene50675.t1	MTR_4g025830	44.286	70	35	2	19	85	79	147	3.22e-13	61.2
MS.gene50675.t1	MTR_4g005320	43.284	67	37	1	19	85	70	135	3.55e-13	61.2
MS.gene50675.t1	MTR_3g098970	35.135	74	47	1	12	85	46	118	1.07e-12	59.7
MS.gene50675.t1	MTR_1g063950	42.647	68	38	1	18	85	47	113	1.66e-12	58.5
MS.gene50675.t1	MTR_8g461210	43.939	66	36	1	18	83	34	98	2.82e-12	57.8
MS.gene50675.t1	MTR_3g105900	63.415	41	15	0	18	58	1171	1211	6.85e-12	59.7
MS.gene50675.t1	MTR_3g109160	40.000	75	44	1	9	83	59	132	2.23e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50675.t1	AT4G38840	66.176	68	22	1	18	84	32	99	6.67e-31	104
MS.gene50675.t1	AT4G38850	57.692	78	30	1	7	81	9	86	9.24e-29	99.0
MS.gene50675.t1	AT2G21210	55.844	77	32	1	11	85	20	96	9.26e-29	99.4
MS.gene50675.t1	AT2G21210	55.844	77	32	1	11	85	87	163	3.77e-28	99.8
MS.gene50675.t1	AT5G18060	63.636	66	23	1	20	84	25	90	3.78e-28	97.4
MS.gene50675.t1	AT5G18080	62.687	67	24	1	19	84	24	90	5.49e-28	97.1
MS.gene50675.t1	AT5G18020	65.625	64	21	1	19	81	24	87	5.77e-28	97.1
MS.gene50675.t1	AT5G18050	61.194	67	25	1	19	84	24	90	1.60e-27	95.9
MS.gene50675.t1	AT4G38825	58.333	72	29	1	14	84	18	89	2.53e-27	95.5
MS.gene50675.t1	AT2G21200	56.579	76	32	1	9	83	11	86	2.80e-27	95.1
MS.gene50675.t1	AT5G18030	61.194	67	25	1	19	84	22	88	4.07e-27	94.7
MS.gene50675.t1	AT4G34770	61.333	75	27	1	12	84	28	102	6.57e-27	94.7
MS.gene50675.t1	AT3G03820	58.108	74	28	1	11	81	19	92	8.79e-27	94.4
MS.gene50675.t1	AT4G34810	59.701	67	23	1	19	81	48	114	1.79e-26	94.0
MS.gene50675.t1	AT5G18010	59.701	67	26	1	19	84	24	90	4.63e-26	92.4
MS.gene50675.t1	AT4G34800	52.222	90	35	3	1	85	1	87	5.71e-26	92.0
MS.gene50675.t1	AT3G03840	53.012	83	32	2	1	81	14	91	9.30e-26	91.7
MS.gene50675.t1	AT3G03850	62.687	67	23	1	20	84	26	92	9.56e-25	89.0
MS.gene50675.t1	AT4G13790	47.368	76	38	1	8	81	14	89	1.51e-24	88.6
MS.gene50675.t1	AT3G03830	52.703	74	32	1	14	84	19	92	1.07e-22	84.0
MS.gene50675.t1	AT4G34780	56.338	71	28	1	17	84	26	96	1.21e-22	84.0
MS.gene50675.t1	AT4G38860	54.412	68	31	0	17	84	38	105	1.58e-22	83.6
MS.gene50675.t1	AT4G34790	58.462	65	25	1	19	81	39	103	7.62e-22	82.0
MS.gene50675.t1	AT2G21220	53.731	67	30	1	17	83	38	103	4.06e-21	80.1
MS.gene50675.t1	AT1G75580	55.224	67	29	1	17	83	42	107	1.44e-20	79.0
MS.gene50675.t1	AT4G34760	51.471	68	32	1	17	84	41	107	4.85e-20	77.4
MS.gene50675.t1	AT2G16580	51.471	68	32	1	17	84	42	108	1.27e-19	76.6
MS.gene50675.t1	AT4G36110	50.000	66	32	1	18	83	39	103	1.20e-18	73.9
MS.gene50675.t1	AT2G18010	50.000	66	32	1	18	83	47	111	1.58e-18	73.9
MS.gene50675.t1	AT1G19830	55.072	69	29	2	17	84	46	113	1.20e-17	71.6
MS.gene50675.t1	AT5G20810	54.237	59	26	1	18	76	78	135	6.81e-17	70.9
MS.gene50675.t1	AT5G20810	54.237	59	26	1	18	76	78	135	1.24e-16	70.9
MS.gene50675.t1	AT4G34750	43.478	69	38	1	18	86	36	103	2.49e-16	69.3
MS.gene50675.t1	AT4G34750	43.478	69	38	1	18	86	36	103	2.49e-16	69.3
MS.gene50675.t1	AT3G43120	50.847	59	28	1	18	76	78	135	2.56e-16	69.3
MS.gene50675.t1	AT3G20220	50.725	69	32	2	19	86	47	114	2.82e-16	68.2
MS.gene50675.t1	AT2G46690	41.250	80	43	2	8	84	13	91	3.34e-16	68.2
MS.gene50675.t1	AT3G61900	44.286	70	35	2	18	84	29	97	1.15e-15	67.0
MS.gene50675.t1	AT5G66260	48.000	75	35	2	13	84	25	98	2.90e-15	65.1
MS.gene50675.t1	AT4G00880	41.176	85	46	3	3	85	13	95	7.27e-15	64.7
MS.gene50675.t1	AT2G37030	44.595	74	40	1	7	80	37	109	3.21e-14	63.2
MS.gene50675.t1	AT5G10990	42.466	73	38	2	4	76	29	97	4.04e-14	63.5
MS.gene50675.t1	AT5G53590	41.096	73	37	2	18	85	45	116	5.38e-14	63.2
MS.gene50675.t1	AT3G51200	42.169	83	42	3	8	85	24	105	7.13e-14	61.6
MS.gene50675.t1	AT1G75590	49.153	59	29	1	18	76	41	98	9.75e-14	62.4
MS.gene50675.t1	AT1G19840	45.205	73	36	2	4	76	29	97	3.61e-13	61.2
MS.gene50675.t1	AT3G60690	44.286	70	35	2	19	85	88	156	1.93e-12	59.7
MS.gene50675.t1	AT3G53250	40.541	74	40	1	7	80	40	109	2.01e-12	58.5
MS.gene50675.t1	AT3G53250	40.541	74	40	1	7	80	71	140	3.45e-12	58.5
MS.gene50675.t1	AT2G45210	44.286	70	35	2	19	85	79	147	4.34e-12	58.5
MS.gene50675.t1	AT2G24400	42.308	78	43	2	8	84	52	128	1.14e-11	57.8
MS.gene50675.t1	AT4G31320	40.260	77	44	2	8	83	68	143	2.25e-11	57.0
MS.gene50675.t1	AT4G12410	51.786	56	23	2	19	71	76	130	4.59e-11	55.8

Find 24 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCGTTTGCCTGGTATTAAA+AGG	0.258888	4.3:+33494029	MS.gene50675:CDS
GTTTGGTTCAAGTATGATAT+AGG	0.309966	4.3:-33494133	None:intergenic
AGCCAAGCTGAGGAACAATT+TGG	0.345134	4.3:+33494175	MS.gene50675:CDS
ACAACTCCTGGAATGTGGTT+TGG	0.422583	4.3:-33494150	None:intergenic
TTTGGTTCAAGTATGATATA+GGG	0.441381	4.3:-33494132	None:intergenic
AAAATGGGATTTCGTTTGCC+TGG	0.458807	4.3:+33494019	None:intergenic
CTTGAACCAAACCACATTCC+AGG	0.460016	4.3:+33494144	MS.gene50675:CDS
CAGCTTGGCTCAACAACTCC+TGG	0.464846	4.3:-33494162	None:intergenic
ATCCAAATTGTTCCTCAGCT+TGG	0.484148	4.3:-33494177	None:intergenic
GGATGTCTTGCGGTGTATGT+AGG	0.513609	4.3:+33494085	MS.gene50675:CDS
TCGTTTGCCTGGTATTAAAA+GGG	0.524585	4.3:+33494030	MS.gene50675:CDS
AAAGATGTAGACGTGCCAAC+GGG	0.527939	4.3:+33494064	MS.gene50675:CDS
TTTGGATATGATCATCCAAT+GGG	0.539208	4.3:+33494193	MS.gene50675:CDS
ATTTGGATATGATCATCCAA+TGG	0.556875	4.3:+33494192	MS.gene50675:CDS
GCTCAACAACTCCTGGAATG+TGG	0.576803	4.3:-33494155	None:intergenic
AAAAGATGTAGACGTGCCAA+CGG	0.600098	4.3:+33494063	MS.gene50675:CDS
CGTGCCAACGGGATGTCTTG+CGG	0.605574	4.3:+33494075	MS.gene50675:CDS
GGAATTGTGATACCACCCAT+TGG	0.617222	4.3:-33494208	None:intergenic
GGAGTTGTTGAGCCAAGCTG+AGG	0.641874	4.3:+33494165	MS.gene50675:CDS
GGTGGTATCACAATTCCTTG+TGG	0.652485	4.3:+33494214	MS.gene50675:CDS
GGATATGATCATCCAATGGG+TGG	0.655640	4.3:+33494196	MS.gene50675:CDS
AAGAACAAGTCTTCTCCACA+AGG	0.663379	4.3:-33494229	None:intergenic
TACACCGCAAGACATCCCGT+TGG	0.695701	4.3:-33494079	None:intergenic
ATGTAGGAGAGAAAATGAAG+CGG	0.712638	4.3:+33494101	MS.gene50675:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGGTTCAAGTATGATATA+GGG	-	chr4.3:33494135-33494154	None:intergenic	25.0%
	ATTTGGATATGATCATCCAA+TGG	+	chr4.3:33494192-33494211	MS.gene50675:CDS	30.0%
	TTTGGATATGATCATCCAAT+GGG	+	chr4.3:33494193-33494212	MS.gene50675:CDS	30.0%
!	GTTTGGTTCAAGTATGATAT+AGG	-	chr4.3:33494136-33494155	None:intergenic	30.0%
	ATGTAGGAGAGAAAATGAAG+CGG	+	chr4.3:33494101-33494120	MS.gene50675:CDS	35.0%
	TCGTTTGCCTGGTATTAAAA+GGG	+	chr4.3:33494030-33494049	MS.gene50675:CDS	35.0%
	TTCGTTTGCCTGGTATTAAA+AGG	+	chr4.3:33494029-33494048	MS.gene50675:CDS	35.0%
	AAAAGATGTAGACGTGCCAA+CGG	+	chr4.3:33494063-33494082	MS.gene50675:CDS	40.0%
	AAGAACAAGTCTTCTCCACA+AGG	-	chr4.3:33494232-33494251	None:intergenic	40.0%
	ATCCAAATTGTTCCTCAGCT+TGG	-	chr4.3:33494180-33494199	None:intergenic	40.0%
	AAAGATGTAGACGTGCCAAC+GGG	+	chr4.3:33494064-33494083	MS.gene50675:CDS	45.0%
	ACAACTCCTGGAATGTGGTT+TGG	-	chr4.3:33494153-33494172	None:intergenic	45.0%
	AGCCAAGCTGAGGAACAATT+TGG	+	chr4.3:33494175-33494194	MS.gene50675:CDS	45.0%
	CTTGAACCAAACCACATTCC+AGG	+	chr4.3:33494144-33494163	MS.gene50675:CDS	45.0%
	GGAATTGTGATACCACCCAT+TGG	-	chr4.3:33494211-33494230	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.3:33494196-33494215	MS.gene50675:CDS	45.0%
	GGTGGTATCACAATTCCTTG+TGG	+	chr4.3:33494214-33494233	MS.gene50675:CDS	45.0%
!	GATGCTGCCCTTTTAATACC+AGG	-	chr4.3:33494040-33494059	None:intergenic	45.0%
	GCTCAACAACTCCTGGAATG+TGG	-	chr4.3:33494158-33494177	None:intergenic	50.0%
	GGATGTCTTGCGGTGTATGT+AGG	+	chr4.3:33494085-33494104	MS.gene50675:CDS	50.0%
	CAGCTTGGCTCAACAACTCC+TGG	-	chr4.3:33494165-33494184	None:intergenic	55.0%
	GGAGTTGTTGAGCCAAGCTG+AGG	+	chr4.3:33494165-33494184	MS.gene50675:CDS	55.0%
	TACACCGCAAGACATCCCGT+TGG	-	chr4.3:33494082-33494101	None:intergenic	55.0%
	CGTGCCAACGGGATGTCTTG+CGG	+	chr4.3:33494075-33494094	MS.gene50675:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	33494022	33494282	33494022	ID=MS.gene50675
chr4.3	mRNA	33494022	33494282	33494022	ID=MS.gene50675.t1;Parent=MS.gene50675
chr4.3	exon	33494022	33494282	33494022	ID=MS.gene50675.t1.exon1;Parent=MS.gene50675.t1
chr4.3	CDS	33494022	33494282	33494022	ID=cds.MS.gene50675.t1;Parent=MS.gene50675.t1

Gene Sequence	>MS.gene50675 ATGGGATTTCGTTTGCCTGGTATTAAAAGGGCAGCATCTTCAAAAGATGTAGACGTGCCAACGGGATGTCTTGCGGTGTATGTAGGAGAGAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAACCAAACCACATTCCAGGAGTTGTTGAGCCAAGCTGAGGAACAATTTGGATATGATCATCCAATGGGTGGTATCACAATTCCTTGTGGAGAAGACTTGTTCTTAGATATCACTTCTCTCTTAAATTCGTGCTAA
Protein sequence	>MS.gene50675.t1 MGFRLPGIKRAASSKDVDVPTGCLAVYVGEKMKRFVIPISYLNQTTFQELLSQAEEQFGYDHPMGGITIPCGEDLFLDITSLLNSC