AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23370.t1 MTR_4g072310 87.097 93 12 0 1 93 1 93 7.26e-59 175
MS.gene23370.t1 MTR_4g072250 92.473 93 6 1 1 93 1 92 8.12e-59 175
MS.gene23370.t1 MTR_4g072880 84.946 93 14 0 1 93 1 93 1.12e-57 172
MS.gene23370.t1 MTR_4g072270 83.871 93 15 0 1 93 1 93 7.48e-56 167
MS.gene23370.t1 MTR_4g072230 84.946 93 12 1 1 93 1 91 1.39e-55 167
MS.gene23370.t1 MTR_4g072860 81.720 93 17 0 1 93 1 93 5.72e-54 163
MS.gene23370.t1 MTR_3g084150 77.419 93 20 1 1 93 1 92 6.96e-51 155
MS.gene23370.t1 MTR_8g461410 76.344 93 21 1 1 93 1 92 1.71e-50 154
MS.gene23370.t1 MTR_3g084170 77.419 93 20 1 1 93 1 92 3.46e-50 153
MS.gene23370.t1 MTR_3g084180 76.344 93 21 1 1 93 1 92 5.79e-50 152
MS.gene23370.t1 MTR_4g072500 75.269 93 22 1 1 93 1 92 1.98e-49 151
MS.gene23370.t1 MTR_3g084240 76.344 93 21 1 1 93 1 92 3.46e-49 150
MS.gene23370.t1 MTR_4g072640 78.022 91 19 1 1 91 1 90 1.15e-48 149
MS.gene23370.t1 MTR_3g084220 75.269 93 22 1 1 93 1 92 1.59e-48 149
MS.gene23370.t1 MTR_3g110032 73.118 93 25 0 1 93 1 93 3.35e-48 148
MS.gene23370.t1 MTR_3g110038 75.269 93 22 1 1 93 1 92 4.09e-48 148
MS.gene23370.t1 MTR_4g050700 73.118 93 25 0 1 93 1 93 6.40e-48 147
MS.gene23370.t1 MTR_2g012410 73.118 93 25 0 1 93 1 93 6.40e-48 147
MS.gene23370.t1 MTR_4g072850 81.522 92 16 1 1 91 1 92 7.36e-48 147
MS.gene23370.t1 MTR_4g072480 75.269 93 22 1 1 93 1 92 1.56e-47 146
MS.gene23370.t1 MTR_4g072240 73.626 91 24 0 1 91 1 91 1.67e-47 146
MS.gene23370.t1 MTR_4g072530 74.725 91 22 1 1 91 1 90 1.69e-47 146
MS.gene23370.t1 MTR_4g072620 75.269 93 22 1 1 93 1 92 2.39e-47 146
MS.gene23370.t1 MTR_4g072730 76.087 92 21 1 1 92 1 91 4.10e-47 145
MS.gene23370.t1 MTR_4g072680 75.269 93 22 1 1 93 1 92 4.14e-47 145
MS.gene23370.t1 MTR_3g117630 78.409 88 19 0 4 91 3 90 5.22e-47 145
MS.gene23370.t1 MTR_4g072460 75.269 93 22 1 1 93 1 92 5.89e-47 145
MS.gene23370.t1 MTR_4g072570 74.194 93 23 1 1 93 1 92 2.35e-46 144
MS.gene23370.t1 MTR_3g110042 78.409 88 18 1 1 88 1 87 4.49e-46 143
MS.gene23370.t1 MTR_3g084260 72.043 93 26 0 1 93 1 93 5.63e-46 142
MS.gene23370.t1 MTR_4g072220 68.817 93 29 0 1 93 1 93 3.37e-45 140
MS.gene23370.t1 MTR_4g072300 69.231 91 28 0 1 91 1 91 8.33e-45 139
MS.gene23370.t1 MTR_4g072870 69.231 91 28 0 1 91 1 91 1.32e-44 139
MS.gene23370.t1 MTR_3g084250 69.892 93 27 1 1 93 1 92 3.38e-44 138
MS.gene23370.t1 MTR_4g072370 73.626 91 21 1 1 91 1 88 4.05e-44 138
MS.gene23370.t1 MTR_4g072940 78.261 92 19 1 3 93 33 124 7.73e-44 138
MS.gene23370.t1 MTR_4g072580 73.626 91 18 1 1 91 1 85 1.20e-43 136
MS.gene23370.t1 MTR_4g072830 75.556 90 19 1 1 90 1 87 2.89e-43 135
MS.gene23370.t1 MTR_4g072890 68.132 91 29 0 1 91 1 91 3.14e-43 135
MS.gene23370.t1 MTR_4g072740 73.626 91 18 1 1 91 1 85 5.09e-43 135
MS.gene23370.t1 MTR_4g072610 75.824 91 15 1 1 91 1 84 5.59e-43 135
MS.gene23370.t1 MTR_4g072260 65.591 93 32 0 1 93 1 93 7.11e-43 135
MS.gene23370.t1 MTR_4g072490 71.429 91 20 1 1 91 1 85 9.61e-43 134
MS.gene23370.t1 MTR_4g072330 69.231 91 25 1 1 91 1 88 1.30e-42 134
MS.gene23370.t1 MTR_4g072660 68.817 93 23 1 1 93 1 87 3.76e-42 133
MS.gene23370.t1 MTR_5g008370 71.579 95 20 2 1 92 1 91 5.49e-42 134
MS.gene23370.t1 MTR_5g008360 75.949 79 19 0 15 93 5 83 8.14e-42 132
MS.gene23370.t1 MTR_4g072290 68.817 93 15 1 1 93 1 79 1.58e-41 131
MS.gene23370.t1 MTR_4g072470 70.330 91 21 1 1 91 1 85 9.64e-41 129
MS.gene23370.t1 MTR_4g072650 71.429 91 19 1 1 91 1 84 2.16e-40 128
MS.gene23370.t1 MTR_4g072820 70.652 92 19 2 1 91 1 85 4.41e-40 127
MS.gene23370.t1 MTR_3g084210 72.043 93 25 1 1 93 1 92 4.61e-40 127
MS.gene23370.t1 MTR_4g072540 70.330 91 22 1 1 91 1 86 7.23e-40 127
MS.gene23370.t1 MTR_8g461420 68.817 93 28 1 1 93 1 92 8.53e-40 127
MS.gene23370.t1 MTR_4g072630 68.132 91 24 1 1 91 1 86 1.13e-39 126
MS.gene23370.t1 MTR_3g084190 69.231 91 27 1 1 91 1 90 1.35e-39 126
MS.gene23370.t1 MTR_3g084230 73.118 93 24 1 1 93 1 92 3.87e-39 125
MS.gene23370.t1 MTR_4g072600 68.132 91 23 1 1 91 1 85 4.55e-39 125
MS.gene23370.t1 MTR_4g072465 68.132 91 24 2 1 91 1 86 4.56e-39 125
MS.gene23370.t1 MTR_4g072670 69.231 91 23 1 1 91 1 86 1.68e-38 124
MS.gene23370.t1 MTR_4g072380 68.132 91 24 2 1 91 1 86 7.79e-38 122
MS.gene23370.t1 MTR_4g072550 64.444 90 30 1 4 93 16 103 1.15e-37 122
MS.gene23370.t1 MTR_3g084160 68.817 93 28 1 1 93 1 92 1.46e-37 121
MS.gene23370.t1 MTR_4g072720 68.132 91 24 1 1 91 1 86 1.80e-37 121
MS.gene23370.t1 MTR_3g110045 72.527 91 24 1 3 93 62 151 2.52e-37 122
MS.gene23370.t1 MTR_4g072590 68.132 91 23 1 1 91 1 85 1.20e-36 119
MS.gene23370.t1 MTR_4g072510 67.033 91 25 1 1 91 1 86 3.63e-36 117
MS.gene23370.t1 MTR_3g084200 71.233 73 20 1 1 73 1 72 3.74e-34 113
MS.gene23370.t1 MTR_4g072560 53.061 98 39 2 1 91 1 98 1.78e-33 111
MS.gene23370.t1 MTR_4g072690 64.835 91 26 1 1 91 1 85 2.38e-33 110
MS.gene23370.t1 MTR_4g072910 58.511 94 33 1 4 91 7 100 3.49e-33 110
MS.gene23370.t1 MTR_5g008350 66.250 80 21 1 1 80 1 74 1.16e-32 108
MS.gene23370.t1 MTR_4g072450 63.736 91 27 1 1 91 1 85 1.50e-32 108
MS.gene23370.t1 MTR_4g072980 54.737 95 41 2 1 93 1 95 1.68e-32 108
MS.gene23370.t1 MTR_4g072770 72.727 66 18 0 26 91 15 80 5.69e-31 104
MS.gene23370.t1 MTR_3g117640 66.667 69 22 1 25 92 33 101 3.10e-30 103
MS.gene23370.t1 MTR_3g110035 68.182 66 21 0 28 93 73 138 3.77e-29 101
MS.gene23370.t1 MTR_4g072750 65.333 75 23 2 1 73 1 74 4.87e-28 97.4
MS.gene23370.t1 MTR_4g072280 60.000 75 30 0 1 75 1 75 1.34e-27 96.3
MS.gene23370.t1 MTR_8g461400 53.763 93 16 2 1 93 1 66 5.90e-27 94.0
MS.gene23370.t1 MTR_3g113310 59.701 67 26 1 24 90 40 105 1.13e-26 94.4
MS.gene23370.t1 MTR_3g117610 63.077 65 23 1 24 88 43 106 8.92e-26 92.4
MS.gene23370.t1 MTR_6g077850 58.209 67 28 0 25 91 33 99 1.09e-25 92.0
MS.gene23370.t1 MTR_4g072190 61.194 67 25 1 24 90 34 99 2.07e-25 91.3
MS.gene23370.t1 MTR_4g072930 53.086 81 32 2 17 91 30 110 4.42e-23 85.5
MS.gene23370.t1 MTR_5g021820 56.061 66 28 1 25 90 39 103 1.96e-22 83.6
MS.gene23370.t1 MTR_8g076040 57.812 64 26 1 25 88 40 102 3.11e-22 83.2
MS.gene23370.t1 MTR_4g072840 50.000 92 13 3 1 91 1 60 2.11e-20 77.4
MS.gene23370.t1 MTR_2g043960 56.452 62 26 1 25 86 75 135 4.73e-18 74.3
MS.gene23370.t1 MTR_4g124750 54.688 64 28 1 25 88 68 130 1.13e-17 73.2
MS.gene23370.t1 MTR_1g024085 54.286 70 28 2 15 84 29 94 1.97e-17 72.0
MS.gene23370.t1 MTR_1g061570 45.882 85 42 2 8 92 4 84 9.63e-17 69.7
MS.gene23370.t1 MTR_7g118010 50.000 68 31 2 26 91 23 89 1.54e-16 68.9
MS.gene23370.t1 MTR_1g094750 48.148 81 38 2 9 86 30 109 2.88e-16 68.6
MS.gene23370.t1 MTR_4g025830 47.059 68 32 2 26 90 79 145 2.96e-16 69.3
MS.gene23370.t1 MTR_3g092220 51.515 66 29 2 21 84 28 92 5.38e-16 67.8
MS.gene23370.t1 MTR_1g009150 55.738 61 26 1 26 86 71 130 6.15e-16 68.9
MS.gene23370.t1 MTR_3g109160 53.731 67 30 1 26 92 69 134 6.53e-16 68.9
MS.gene23370.t1 MTR_4g005310 48.485 66 33 1 22 86 58 123 9.12e-16 68.2
MS.gene23370.t1 MTR_8g461210 42.857 91 48 3 4 92 14 102 1.36e-15 66.6
MS.gene23370.t1 MTR_4g005320 52.459 61 28 1 26 86 70 129 1.64e-15 67.8
MS.gene23370.t1 MTR_0388s0020 44.928 69 34 2 25 90 74 141 2.76e-15 66.6
MS.gene23370.t1 MTR_8g026730 45.588 68 34 2 26 91 27 93 4.69e-15 65.1
MS.gene23370.t1 MTR_4g072160 53.226 62 28 1 25 86 36 96 5.75e-15 65.5
MS.gene23370.t1 MTR_3g105900 76.316 38 9 0 23 60 1169 1206 1.82e-14 67.4
MS.gene23370.t1 MTR_7g101740 48.438 64 32 1 25 88 39 101 8.05e-14 62.0
MS.gene23370.t1 MTR_3g098970 37.037 81 49 2 13 93 41 119 8.30e-14 62.8
MS.gene23370.t1 MTR_1g063950 47.458 59 30 1 25 83 47 104 1.45e-13 61.6
MS.gene23370.t1 MTR_1g059770 40.000 65 38 1 26 90 49 112 4.23e-13 60.5
MS.gene23370.t1 MTR_8g101520 46.154 65 34 1 27 91 51 114 1.01e-12 60.5
MS.gene23370.t1 MTR_3g097120 41.772 79 37 2 21 91 4 81 3.87e-12 57.4
MS.gene23370.t1 MTR_7g405740 45.902 61 32 1 26 86 67 126 8.02e-12 58.2
MS.gene23370.t1 MTR_7g104940 38.710 62 37 1 29 90 53 113 9.55e-12 57.0
MS.gene23370.t1 MTR_2g095430 48.276 58 25 2 25 78 44 100 1.30e-11 56.6
MS.gene23370.t1 MTR_2g066830 37.879 66 40 1 26 91 58 122 5.21e-11 55.5
MS.gene23370.t1 MTR_8g096470 43.333 60 33 1 27 86 47 105 5.64e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23370.t1 AT4G38840 63.529 85 30 1 8 91 15 99 1.72e-34 114
MS.gene23370.t1 AT5G18060 67.105 76 24 1 17 91 15 90 5.80e-34 112
MS.gene23370.t1 AT5G18050 65.789 76 25 1 17 91 15 90 7.63e-34 112
MS.gene23370.t1 AT5G18020 64.474 76 26 1 17 91 15 90 4.84e-33 110
MS.gene23370.t1 AT5G18080 65.789 76 25 1 17 91 15 90 1.13e-32 109
MS.gene23370.t1 AT5G18030 66.667 72 23 1 21 91 17 88 6.10e-32 107
MS.gene23370.t1 AT2G21200 65.385 78 24 2 16 90 9 86 1.63e-31 106
MS.gene23370.t1 AT5G18010 63.158 76 27 1 17 91 15 90 1.64e-31 106
MS.gene23370.t1 AT3G03840 61.842 76 27 1 19 92 20 95 8.39e-31 104
MS.gene23370.t1 AT4G34770 65.789 76 24 1 19 92 28 103 1.90e-30 103
MS.gene23370.t1 AT2G21210 63.014 73 25 1 21 91 23 95 3.67e-30 103
MS.gene23370.t1 AT4G38825 63.889 72 25 1 21 91 18 89 5.36e-30 102
MS.gene23370.t1 AT3G03850 70.588 68 18 1 27 92 26 93 6.49e-30 102
MS.gene23370.t1 AT2G21210 63.014 73 25 1 21 91 90 162 1.86e-29 103
MS.gene23370.t1 AT3G03820 54.255 94 37 2 2 92 6 96 2.90e-29 100
MS.gene23370.t1 AT4G38850 56.322 87 25 2 8 91 13 89 9.05e-29 99.4
MS.gene23370.t1 AT3G03830 55.682 88 32 2 11 91 5 92 9.64e-29 99.4
MS.gene23370.t1 AT4G34810 64.286 70 20 2 26 90 48 117 3.19e-27 96.3
MS.gene23370.t1 AT4G34800 68.852 61 16 1 26 83 21 81 5.54e-27 95.1
MS.gene23370.t1 AT4G38860 58.824 68 28 0 24 91 38 105 2.44e-25 91.3
MS.gene23370.t1 AT4G13790 50.588 85 34 2 8 90 13 91 2.47e-25 90.9
MS.gene23370.t1 AT4G34780 50.000 94 41 2 4 91 3 96 2.48e-25 91.3
MS.gene23370.t1 AT2G21220 59.701 67 26 1 24 90 38 103 6.41e-25 90.1
MS.gene23370.t1 AT4G34760 61.538 65 24 1 24 88 41 104 1.19e-24 89.4
MS.gene23370.t1 AT1G75580 61.194 67 25 1 24 90 42 107 2.74e-24 88.6
MS.gene23370.t1 AT4G34790 56.923 65 26 1 26 88 39 103 1.82e-22 84.0
MS.gene23370.t1 AT2G16580 56.923 65 27 1 24 88 42 105 2.41e-21 81.3
MS.gene23370.t1 AT1G19830 60.294 68 25 2 24 90 46 112 3.40e-21 80.9
MS.gene23370.t1 AT4G36110 56.250 64 27 1 25 88 39 101 6.38e-21 80.1
MS.gene23370.t1 AT2G18010 54.688 64 28 1 25 88 47 109 1.02e-19 77.0
MS.gene23370.t1 AT3G20220 55.385 65 27 2 26 89 47 110 4.63e-19 75.5
MS.gene23370.t1 AT3G43120 54.839 62 27 1 25 86 78 138 2.77e-18 74.7
MS.gene23370.t1 AT5G66260 53.030 66 30 1 26 91 34 98 7.55e-18 72.0
MS.gene23370.t1 AT2G46690 44.706 85 42 3 12 92 9 92 1.09e-17 72.0
MS.gene23370.t1 AT5G20810 56.452 62 26 1 25 86 78 138 1.90e-17 72.8
MS.gene23370.t1 AT5G20810 56.452 62 26 1 25 86 78 138 4.73e-17 72.4
MS.gene23370.t1 AT1G75590 50.000 74 34 2 11 84 29 99 8.49e-17 70.9
MS.gene23370.t1 AT5G10990 53.333 60 27 1 25 84 40 98 3.09e-16 69.3
MS.gene23370.t1 AT3G51200 53.333 60 26 2 25 83 38 96 3.61e-16 67.8
MS.gene23370.t1 AT3G61900 45.833 72 35 2 23 91 27 97 3.76e-16 68.6
MS.gene23370.t1 AT4G34750 46.970 66 34 1 23 88 34 98 5.52e-16 68.6
MS.gene23370.t1 AT4G34750 46.970 66 34 1 23 88 34 98 5.52e-16 68.6
MS.gene23370.t1 AT1G19840 51.429 70 31 2 15 84 32 98 7.14e-16 68.2
MS.gene23370.t1 AT2G45210 42.466 73 38 2 21 90 74 145 1.44e-15 67.8
MS.gene23370.t1 AT3G60690 44.928 69 34 2 26 91 88 155 1.02e-14 65.9
MS.gene23370.t1 AT5G53590 35.417 96 56 2 1 91 21 115 1.03e-14 65.1
MS.gene23370.t1 AT4G00880 50.000 68 31 2 26 91 28 94 1.61e-14 63.9
MS.gene23370.t1 AT2G24400 48.529 68 34 1 19 86 57 123 2.49e-14 65.1
MS.gene23370.t1 AT4G31320 46.753 77 34 2 10 86 70 139 2.97e-14 65.1
MS.gene23370.t1 AT2G37030 50.847 59 28 1 25 83 48 105 9.58e-14 62.0
MS.gene23370.t1 AT4G12410 44.118 68 34 2 26 90 76 142 8.07e-13 60.5
MS.gene23370.t1 AT3G09870 48.438 64 30 2 25 86 44 106 2.00e-12 58.5
MS.gene23370.t1 AT4G09530 43.662 71 34 3 17 84 22 89 2.98e-12 57.8
MS.gene23370.t1 AT1G56150 43.939 66 36 1 26 91 38 102 3.21e-12 57.8
MS.gene23370.t1 AT3G12830 39.189 74 44 1 18 91 42 114 3.76e-12 58.2
MS.gene23370.t1 AT3G53250 47.458 59 27 1 25 83 51 105 3.90e-12 58.2
MS.gene23370.t1 AT3G53250 47.458 59 27 1 25 83 82 136 5.95e-12 58.2
MS.gene23370.t1 AT4G22620 40.278 72 39 2 22 90 75 145 6.71e-12 58.2
MS.gene23370.t1 AT1G16510 42.466 73 39 2 22 92 50 121 9.56e-12 57.4
MS.gene23370.t1 AT3G03847 64.286 42 14 1 42 83 87 127 2.68e-11 56.2
MS.gene23370.t1 AT2G36210 38.356 73 45 0 16 88 44 116 4.74e-11 55.5
MS.gene23370.t1 AT1G79130 41.538 65 37 1 26 90 48 111 9.72e-11 54.7

Find 24 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCAAGCCGAGGAAGAGTT+TGG 0.367159 4.4:-36906741 MS.gene23370:CDS
CACATAACATCTCGCTTGAA+CGG 0.512733 4.4:-36906663 MS.gene23370:CDS
CCGAGCAATTTCAAAAGTTG+TGG 0.513570 4.4:-36906865 MS.gene23370:CDS
AAAAGTTGTGGACGTGCCAA+AGG 0.522509 4.4:-36906853 MS.gene23370:CDS
GGATATCTTGCAGTGTATGT+TGG 0.530355 4.4:-36906831 MS.gene23370:CDS
ATCATATCCAAACTCTTCCT+CGG 0.532636 4.4:+36906734 None:intergenic
TACACTGCAAGATATCCCTT+TGG 0.539372 4.4:+36906837 None:intergenic
AGGAATGGTGAGGCCACCCA+TGG 0.554354 4.4:+36906707 None:intergenic
GATGACTTTCTGATGATACC+AGG 0.561136 4.4:+36906900 None:intergenic
GACATCTTCTGTGCAAGGAA+TGG 0.561649 4.4:+36906692 None:intergenic
AAAGTTGTGGACGTGCCAAA+GGG 0.566864 4.4:-36906852 MS.gene23370:CDS
GTTTGGATATGATCATCCCA+TGG 0.570301 4.4:-36906724 MS.gene23370:CDS
CTCAACAAGTCTTGAAACGA+TGG 0.576425 4.4:+36906762 None:intergenic
ACAAGTCTTGAAACGATGGT+TGG 0.594658 4.4:+36906766 None:intergenic
TGAAAGACATCTTCTGTGCA+AGG 0.597377 4.4:+36906687 None:intergenic
GGATATGATCATCCCATGGG+TGG 0.600402 4.4:-36906720 MS.gene23370:CDS
GGTTGGTTCAAGTATGACAT+GGG 0.614423 4.4:+36906783 None:intergenic
TGGTTGGTTCAAGTATGACA+TGG 0.614905 4.4:+36906782 None:intergenic
AGACTTGTTGAGTCAAGCCG+AGG 0.633253 4.4:-36906751 MS.gene23370:CDS
GGAATGGTGAGGCCACCCAT+GGG 0.636587 4.4:+36906708 None:intergenic
TTTGGATATGATCATCCCAT+GGG 0.641263 4.4:-36906723 MS.gene23370:CDS
ATGACTTTCTGATGATACCA+GGG 0.652192 4.4:+36906901 None:intergenic
GTTGGTTCAAGTATGACATG+GGG 0.711766 4.4:+36906784 None:intergenic
CTTCTGTGCAAGGAATGGTG+AGG 0.731861 4.4:+36906697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATCATATCCAAACTCTTCCT+CGG + chr4.4:36906840-36906859 None:intergenic 35.0%
ATGACTTTCTGATGATACCA+GGG + chr4.4:36906673-36906692 None:intergenic 35.0%
TTTGGATATGATCATCCCAT+GGG - chr4.4:36906848-36906867 MS.gene23370:CDS 35.0%
!!! CCACAACTTTTGAAATTGCT+CGG + chr4.4:36906709-36906728 None:intergenic 35.0%
ACAAGTCTTGAAACGATGGT+TGG + chr4.4:36906808-36906827 None:intergenic 40.0%
CACATAACATCTCGCTTGAA+CGG - chr4.4:36906908-36906927 MS.gene23370:CDS 40.0%
CCGAGCAATTTCAAAAGTTG+TGG - chr4.4:36906706-36906725 MS.gene23370:CDS 40.0%
CTCAACAAGTCTTGAAACGA+TGG + chr4.4:36906812-36906831 None:intergenic 40.0%
GATGACTTTCTGATGATACC+AGG + chr4.4:36906674-36906693 None:intergenic 40.0%
GGATATCTTGCAGTGTATGT+TGG - chr4.4:36906740-36906759 MS.gene23370:CDS 40.0%
GTTTGGATATGATCATCCCA+TGG - chr4.4:36906847-36906866 MS.gene23370:CDS 40.0%
TACACTGCAAGATATCCCTT+TGG + chr4.4:36906737-36906756 None:intergenic 40.0%
TGAAAGACATCTTCTGTGCA+AGG + chr4.4:36906887-36906906 None:intergenic 40.0%
! GGTTGGTTCAAGTATGACAT+GGG + chr4.4:36906791-36906810 None:intergenic 40.0%
! GTTGGTTCAAGTATGACATG+GGG + chr4.4:36906790-36906809 None:intergenic 40.0%
! TGGTTGGTTCAAGTATGACA+TGG + chr4.4:36906792-36906811 None:intergenic 40.0%
AAAAGTTGTGGACGTGCCAA+AGG - chr4.4:36906718-36906737 MS.gene23370:CDS 45.0%
AAAGTTGTGGACGTGCCAAA+GGG - chr4.4:36906719-36906738 MS.gene23370:CDS 45.0%
GACATCTTCTGTGCAAGGAA+TGG + chr4.4:36906882-36906901 None:intergenic 45.0%
AGTCAAGCCGAGGAAGAGTT+TGG - chr4.4:36906830-36906849 MS.gene23370:CDS 50.0%
CTTCTGTGCAAGGAATGGTG+AGG + chr4.4:36906877-36906896 None:intergenic 50.0%
GGATATGATCATCCCATGGG+TGG - chr4.4:36906851-36906870 MS.gene23370:CDS 50.0%
!! AGACTTGTTGAGTCAAGCCG+AGG - chr4.4:36906820-36906839 MS.gene23370:CDS 50.0%
AGGAATGGTGAGGCCACCCA+TGG + chr4.4:36906867-36906886 None:intergenic 60.0%
GGAATGGTGAGGCCACCCAT+GGG + chr4.4:36906866-36906885 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 36906656 36906937 36906656 ID=MS.gene23370
chr4.4 mRNA 36906656 36906937 36906656 ID=MS.gene23370.t1;Parent=MS.gene23370
chr4.4 exon 36906656 36906937 36906656 ID=MS.gene23370.t1.exon1;Parent=MS.gene23370.t1
chr4.4 CDS 36906656 36906937 36906656 ID=cds.MS.gene23370.t1;Parent=MS.gene23370.t1
Gene Sequence

>MS.gene23370

ATGGGTTTTCGTTTCCCTGGTATCATCAGAAAGTCATCATTTTCTGCAAGCCGAGCAATTTCAAAAGTTGTGGACGTGCCAAAGGGATATCTTGCAGTGTATGTTGGAGAGAAACAAAATCGATTTGTGATCCCCATGTCATACTTGAACCAACCATCGTTTCAAGACTTGTTGAGTCAAGCCGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACAGAAGATGTCTTTCAACACATAACATCTCGCTTGAACGGAATATGA
Protein sequence

>MS.gene23370.t1

MGFRFPGIIRKSSFSASRAISKVVDVPKGYLAVYVGEKQNRFVIPMSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSRLNGI