AlfalfaGEDB | MS.gene062952

M. sativa cultivar XinJiangDaYe / MS.gene062952

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062952.t1	AES89311.1	94.4	90	5	0	1	90	1	90	9.10E-42	179.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062952.t1	P33080	73.3	90	22	1	1	88	1	90	3.0e-33	142.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062952.t1	G7JL36	94.4	90	5	0	1	90	1	90	6.6e-42	179.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057818	MS.gene062952	0.86925	3.57E-66	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene062952	MS.gene50772	PPI
MS.gene062975	MS.gene062952	PPI
MS.gene062952	MS.gene022358	PPI
MS.gene062952	MS.gene057802	PPI
MS.gene062952	MS.gene057796	PPI
MS.gene062952	MS.gene062954	PPI
MS.gene062952	MS.gene23369	PPI
MS.gene062952	MS.gene003597	PPI
MS.gene062952	MS.gene062986	PPI
MS.gene062952	MS.gene057783	PPI
MS.gene062952	MS.gene50770	PPI
MS.gene062952	MS.gene057811	PPI
MS.gene062952	MS.gene057806	PPI
MS.gene062952	MS.gene062944	PPI
MS.gene062952	MS.gene50658	PPI
MS.gene062952	MS.gene003626	PPI
MS.gene062952	MS.gene50655	PPI
MS.gene062952	MS.gene28863	PPI
MS.gene062952	MS.gene003584	PPI
MS.gene062952	MS.gene057791	PPI
MS.gene062970	MS.gene062952	PPI
MS.gene062942	MS.gene062952	PPI
MS.gene062952	MS.gene057804	PPI
MS.gene062952	MS.gene003580	PPI
MS.gene062952	MS.gene062971	PPI
MS.gene062952	MS.gene50651	PPI
MS.gene062952	MS.gene003576	PPI
MS.gene062952	MS.gene057782	PPI
MS.gene062952	MS.gene062969	PPI
MS.gene062972	MS.gene062952	PPI
MS.gene062952	MS.gene062962	PPI
MS.gene062952	MS.gene50666	PPI
MS.gene062952	MS.gene062985	PPI
MS.gene062952	MS.gene057784	PPI
MS.gene062952	MS.gene062953	PPI
MS.gene062952	MS.gene23368	PPI
MS.gene062952	MS.gene062987	PPI
MS.gene062952	MS.gene057817	PPI
MS.gene062952	MS.gene70684	PPI
MS.gene062952	MS.gene062964	PPI
MS.gene062952	MS.gene062958	PPI
MS.gene062952	MS.gene057798	PPI
MS.gene062952	MS.gene003612	PPI
MS.gene062952	MS.gene77525	PPI
MS.gene062952	MS.gene057777	PPI
MS.gene062952	MS.gene062945	PPI
MS.gene062952	MS.gene062967	PPI
MS.gene062978	MS.gene062952	PPI
MS.gene062952	MS.gene003579	PPI
MS.gene062952	MS.gene062989	PPI
MS.gene062952	MS.gene003595	PPI
MS.gene062952	MS.gene50657	PPI
MS.gene062952	MS.gene003607	PPI
MS.gene062952	MS.gene50656	PPI
MS.gene062952	MS.gene003606	PPI
MS.gene062952	MS.gene50686	PPI
MS.gene003593	MS.gene062952	PPI
MS.gene062952	MS.gene057785	PPI
MS.gene062952	MS.gene70683	PPI
MS.gene062952	MS.gene50670	PPI
MS.gene062952	MS.gene50669	PPI
MS.gene062952	MS.gene70685	PPI
MS.gene062952	MS.gene003622	PPI
MS.gene062952	MS.gene057807	PPI
MS.gene062952	MS.gene003599	PPI
MS.gene062952	MS.gene50662	PPI
MS.gene062952	MS.gene003585	PPI
MS.gene062952	MS.gene50660	PPI
MS.gene062952	MS.gene003623	PPI
MS.gene057816	MS.gene062952	PPI
MS.gene062952	MS.gene50668	PPI
MS.gene062952	MS.gene003581	PPI
MS.gene062952	MS.gene003628	PPI
MS.gene062952	MS.gene003582	PPI
MS.gene062952	MS.gene057794	PPI
MS.gene062952	MS.gene50688	PPI
MS.gene062952	MS.gene003629	PPI
MS.gene062952	MS.gene062983	PPI
MS.gene062952	MS.gene062966	PPI
MS.gene062952	MS.gene062980	PPI
MS.gene062952	MS.gene23367	PPI
MS.gene062952	MS.gene062940	PPI
MS.gene062952	MS.gene003610	PPI
MS.gene062952	MS.gene057809	PPI
MS.gene062952	MS.gene062959	PPI
MS.gene062952	MS.gene50664	PPI
MS.gene062952	MS.gene50773	PPI
MS.gene062952	MS.gene50682	PPI
MS.gene062952	MS.gene057805	PPI
MS.gene062952	MS.gene057800	PPI
MS.gene062952	MS.gene50653	PPI
MS.gene062952	MS.gene003598	PPI
MS.gene062952	MS.gene50690	PPI
MS.gene062952	MS.gene062941	PPI
MS.gene062952	MS.gene057780	PPI
MS.gene062952	MS.gene057788	PPI
MS.gene062952	MS.gene50685	PPI
MS.gene062952	MS.gene003613	PPI
MS.gene062946	MS.gene062952	PPI
MS.gene062952	MS.gene50674	PPI
MS.gene062952	MS.gene057799	PPI
MS.gene003605	MS.gene062952	PPI
MS.gene062952	MS.gene003603	PPI
MS.gene062952	MS.gene003630	PPI
MS.gene062952	MS.gene057779	PPI
MS.gene23373	MS.gene062952	PPI
MS.gene062952	MS.gene50673	PPI
MS.gene062952	MS.gene50689	PPI
MS.gene062952	MS.gene50683	PPI
MS.gene062952	MS.gene062965	PPI
MS.gene062952	MS.gene50771	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062952.t1	MTR_4g072370	94.444	90	5	0	1	90	1	90	7.72e-61	180
MS.gene062952.t1	MTR_4g072330	83.333	90	15	0	1	90	1	90	2.52e-54	163
MS.gene062952.t1	MTR_4g072830	87.778	90	9	1	1	90	1	88	1.90e-53	161
MS.gene062952.t1	MTR_4g072580	82.222	90	13	1	1	90	1	87	3.94e-50	153
MS.gene062952.t1	MTR_4g072740	84.091	88	11	1	1	88	1	85	5.96e-50	152
MS.gene062952.t1	MTR_4g072600	80.000	90	15	1	1	90	1	87	6.57e-48	147
MS.gene062952.t1	MTR_4g072490	78.409	88	16	1	1	88	1	85	9.95e-47	144
MS.gene062952.t1	MTR_4g072630	78.409	88	17	1	1	88	1	86	1.29e-46	144
MS.gene062952.t1	MTR_4g072310	73.626	91	21	1	1	88	1	91	3.28e-46	143
MS.gene062952.t1	MTR_4g072870	72.527	91	22	1	1	88	1	91	6.03e-46	142
MS.gene062952.t1	MTR_4g072470	79.545	88	15	1	1	88	1	85	6.15e-46	142
MS.gene062952.t1	MTR_3g084150	73.333	90	22	1	1	88	1	90	8.09e-46	142
MS.gene062952.t1	MTR_4g072240	70.330	91	24	1	1	88	1	91	4.50e-45	140
MS.gene062952.t1	MTR_3g084180	72.222	90	23	1	1	88	1	90	4.79e-45	140
MS.gene062952.t1	MTR_3g084240	74.444	90	21	1	1	88	1	90	5.52e-45	140
MS.gene062952.t1	MTR_4g072880	72.527	91	22	1	1	88	1	91	6.86e-45	140
MS.gene062952.t1	MTR_3g110038	74.444	90	21	1	1	88	1	90	1.47e-44	139
MS.gene062952.t1	MTR_3g084170	74.444	90	21	1	1	88	1	90	2.57e-44	138
MS.gene062952.t1	MTR_4g072465	73.864	88	21	1	1	88	1	86	2.79e-44	138
MS.gene062952.t1	MTR_8g461410	71.111	90	24	1	1	88	1	90	2.80e-44	138
MS.gene062952.t1	MTR_4g072230	74.725	91	18	2	1	88	1	89	4.65e-44	137
MS.gene062952.t1	MTR_4g072540	78.409	88	17	1	1	88	1	86	4.94e-44	137
MS.gene062952.t1	MTR_4g072610	73.333	90	20	1	1	90	1	86	5.16e-44	137
MS.gene062952.t1	MTR_4g072300	69.231	91	25	1	1	88	1	91	5.49e-44	137
MS.gene062952.t1	MTR_3g110032	71.429	91	23	1	1	88	1	91	1.16e-43	137
MS.gene062952.t1	MTR_4g050700	72.527	91	22	1	1	88	1	91	1.71e-43	136
MS.gene062952.t1	MTR_2g012410	72.527	91	22	1	1	88	1	91	1.71e-43	136
MS.gene062952.t1	MTR_4g072650	74.444	90	19	2	1	90	1	86	2.83e-43	135
MS.gene062952.t1	MTR_4g072220	69.231	91	25	1	1	88	1	91	3.12e-43	135
MS.gene062952.t1	MTR_4g072890	68.132	91	26	1	1	88	1	91	6.92e-43	134
MS.gene062952.t1	MTR_4g072270	70.330	91	24	1	1	88	1	91	1.07e-42	134
MS.gene062952.t1	MTR_4g072670	77.273	88	18	1	1	88	1	86	1.32e-42	134
MS.gene062952.t1	MTR_4g072260	67.033	91	27	1	1	88	1	91	1.97e-42	134
MS.gene062952.t1	MTR_3g084220	71.111	90	24	1	1	88	1	90	2.26e-42	133
MS.gene062952.t1	MTR_3g117630	75.904	83	17	1	9	88	8	90	2.33e-42	133
MS.gene062952.t1	MTR_4g072570	71.111	90	24	1	1	88	1	90	2.36e-42	133
MS.gene062952.t1	MTR_4g072480	70.000	90	25	1	1	88	1	90	3.50e-42	133
MS.gene062952.t1	MTR_3g084250	71.111	90	24	1	1	88	1	90	6.26e-42	132
MS.gene062952.t1	MTR_3g084260	70.330	91	24	1	1	88	1	91	1.57e-41	131
MS.gene062952.t1	MTR_4g072510	75.000	88	20	1	1	88	1	86	1.57e-41	131
MS.gene062952.t1	MTR_4g072720	73.864	88	21	1	1	88	1	86	2.54e-41	130
MS.gene062952.t1	MTR_4g072250	71.429	91	22	2	1	88	1	90	2.55e-41	130
MS.gene062952.t1	MTR_4g072500	70.330	91	23	2	1	88	1	90	2.94e-41	130
MS.gene062952.t1	MTR_4g072620	67.778	90	27	1	1	88	1	90	7.47e-41	129
MS.gene062952.t1	MTR_4g072730	66.667	90	28	1	1	88	1	90	3.07e-40	128
MS.gene062952.t1	MTR_4g072660	68.182	88	25	1	1	88	1	85	3.20e-40	128
MS.gene062952.t1	MTR_4g072860	70.330	91	24	1	1	88	1	91	3.49e-40	128
MS.gene062952.t1	MTR_4g072820	71.910	89	20	2	1	88	1	85	3.54e-40	127
MS.gene062952.t1	MTR_4g072680	66.667	90	28	1	1	88	1	90	4.71e-40	127
MS.gene062952.t1	MTR_4g072530	68.132	91	25	2	1	88	1	90	6.82e-40	127
MS.gene062952.t1	MTR_4g072640	69.231	91	24	2	1	88	1	90	7.15e-40	127
MS.gene062952.t1	MTR_4g072380	71.111	90	22	2	1	89	1	87	1.73e-39	126
MS.gene062952.t1	MTR_3g110042	72.414	87	22	1	1	85	1	87	1.78e-39	126
MS.gene062952.t1	MTR_5g008350	77.922	77	14	1	1	77	1	74	5.40e-39	124
MS.gene062952.t1	MTR_4g072590	72.727	88	21	1	1	88	1	85	8.47e-39	124
MS.gene062952.t1	MTR_4g072460	64.444	90	30	1	1	88	1	90	1.09e-38	124
MS.gene062952.t1	MTR_4g072690	72.727	88	21	1	1	88	1	85	5.41e-38	122
MS.gene062952.t1	MTR_4g072850	70.652	92	23	1	1	88	1	92	9.25e-38	122
MS.gene062952.t1	MTR_3g084190	65.556	90	29	1	1	88	1	90	5.69e-37	120
MS.gene062952.t1	MTR_8g461420	65.556	90	29	1	1	88	1	90	6.42e-37	119
MS.gene062952.t1	MTR_4g072450	71.591	88	22	1	1	88	1	85	7.77e-37	119
MS.gene062952.t1	MTR_3g084230	64.444	90	30	1	1	88	1	90	2.37e-36	118
MS.gene062952.t1	MTR_3g084210	63.333	90	31	1	1	88	1	90	2.67e-36	118
MS.gene062952.t1	MTR_5g008360	65.432	81	28	0	8	88	1	81	1.26e-35	116
MS.gene062952.t1	MTR_3g110045	65.909	88	28	1	3	88	62	149	2.64e-35	117
MS.gene062952.t1	MTR_3g084160	63.736	91	29	2	1	88	1	90	4.09e-35	115
MS.gene062952.t1	MTR_4g072940	70.000	90	23	1	3	88	33	122	5.47e-35	115
MS.gene062952.t1	MTR_5g008370	76.812	69	16	0	20	88	22	90	1.07e-33	113
MS.gene062952.t1	MTR_4g072550	60.465	86	33	1	4	88	16	101	8.52e-33	109
MS.gene062952.t1	MTR_3g084200	70.833	72	19	1	1	70	1	72	5.96e-32	107
MS.gene062952.t1	MTR_4g072560	63.768	69	24	1	22	89	31	99	1.06e-31	107
MS.gene062952.t1	MTR_4g072770	61.798	89	24	2	1	88	1	80	2.70e-31	105
MS.gene062952.t1	MTR_3g117640	62.857	70	25	1	22	90	33	102	5.15e-31	105
MS.gene062952.t1	MTR_4g072910	56.471	85	36	1	4	88	17	100	4.61e-30	102
MS.gene062952.t1	MTR_4g072980	52.273	88	38	2	1	87	8	92	4.68e-30	102
MS.gene062952.t1	MTR_4g072750	64.865	74	22	1	1	70	1	74	1.48e-29	100
MS.gene062952.t1	MTR_4g072280	62.667	75	25	1	1	72	1	75	7.12e-29	99.4
MS.gene062952.t1	MTR_4g072290	56.044	91	23	2	1	88	1	77	6.48e-28	96.7
MS.gene062952.t1	MTR_3g110035	58.750	80	28	1	9	88	62	136	4.44e-27	96.3
MS.gene062952.t1	MTR_6g077850	47.674	86	45	0	3	88	14	99	6.15e-25	89.7
MS.gene062952.t1	MTR_3g117610	60.000	65	25	1	21	85	43	106	5.15e-24	87.8
MS.gene062952.t1	MTR_4g072930	51.220	82	35	2	13	89	30	111	5.59e-24	87.8
MS.gene062952.t1	MTR_3g113310	45.161	93	37	2	6	85	12	103	6.59e-24	87.4
MS.gene062952.t1	MTR_4g072190	50.000	82	39	2	5	85	17	97	1.24e-23	86.7
MS.gene062952.t1	MTR_8g461400	48.889	90	18	2	1	88	1	64	5.85e-20	76.3
MS.gene062952.t1	MTR_2g043960	48.148	81	37	2	4	80	53	132	6.19e-20	79.0
MS.gene062952.t1	MTR_5g021820	54.688	64	28	1	22	85	39	101	9.80e-20	76.6
MS.gene062952.t1	MTR_8g076040	54.688	64	28	1	22	85	40	102	2.86e-19	75.5
MS.gene062952.t1	MTR_1g094750	56.452	62	26	1	22	83	49	109	7.22e-19	74.7
MS.gene062952.t1	MTR_4g072840	49.451	91	15	4	1	90	1	61	2.68e-18	72.0
MS.gene062952.t1	MTR_4g124750	57.627	59	24	1	22	80	68	125	2.77e-18	74.3
MS.gene062952.t1	MTR_1g009150	50.000	74	36	1	10	83	58	130	9.47e-18	73.6
MS.gene062952.t1	MTR_4g005310	51.613	62	29	1	23	83	62	123	2.94e-17	71.6
MS.gene062952.t1	MTR_1g061570	56.452	62	26	1	22	83	18	78	5.59e-17	70.5
MS.gene062952.t1	MTR_4g025830	43.590	78	40	2	12	86	68	144	7.48e-17	70.9
MS.gene062952.t1	MTR_3g092220	47.826	69	33	2	14	80	24	91	9.25e-17	69.3
MS.gene062952.t1	MTR_7g118010	52.381	63	27	2	23	83	23	84	1.00e-16	68.9
MS.gene062952.t1	MTR_1g024085	45.122	82	39	2	4	80	13	93	2.13e-16	69.3
MS.gene062952.t1	MTR_8g461210	55.932	59	25	1	22	80	34	91	2.20e-16	68.6
MS.gene062952.t1	MTR_4g005320	52.459	61	28	1	23	83	70	129	3.86e-16	68.9
MS.gene062952.t1	MTR_1g063950	42.857	70	39	1	14	83	39	107	4.00e-16	68.2
MS.gene062952.t1	MTR_4g072160	45.679	81	41	2	4	83	18	96	6.30e-16	68.2
MS.gene062952.t1	MTR_0388s0020	47.222	72	34	2	17	85	69	139	8.64e-16	67.8
MS.gene062952.t1	MTR_7g101740	50.000	64	31	1	22	85	39	101	1.54e-15	66.2
MS.gene062952.t1	MTR_3g109160	55.738	61	26	1	23	83	69	128	2.33e-15	67.4
MS.gene062952.t1	MTR_8g026730	47.619	63	30	2	23	83	27	88	7.02e-15	64.3
MS.gene062952.t1	MTR_3g105900	80.556	36	7	0	22	57	1171	1206	3.18e-14	66.6
MS.gene062952.t1	MTR_2g095430	43.836	73	36	2	8	76	30	101	3.76e-13	60.5
MS.gene062952.t1	MTR_7g101890	41.429	70	38	2	9	76	38	106	4.57e-13	60.1
MS.gene062952.t1	MTR_4g021810	46.835	79	39	3	4	80	6	83	8.79e-13	58.9
MS.gene062952.t1	MTR_7g405740	45.902	61	32	1	23	83	67	126	1.08e-12	60.1
MS.gene062952.t1	MTR_2g066830	39.506	81	40	3	2	80	41	114	1.23e-12	59.7
MS.gene062952.t1	MTR_8g101520	44.615	65	35	1	24	88	51	114	1.56e-12	59.7
MS.gene062952.t1	MTR_3g097120	44.304	79	33	3	19	89	5	80	2.03e-12	58.2
MS.gene062952.t1	MTR_1g059770	39.683	63	37	1	23	85	49	110	3.24e-12	58.2
MS.gene062952.t1	MTR_4g057810	37.662	77	45	2	6	80	21	96	6.56e-12	57.4
MS.gene062952.t1	MTR_1g063290	43.077	65	34	2	14	76	30	93	1.64e-11	55.8
MS.gene062952.t1	MTR_3g098970	33.333	84	46	2	14	88	35	117	2.30e-11	56.6
MS.gene062952.t1	MTR_8g096470	43.333	60	33	1	24	83	47	105	2.34e-11	55.5
MS.gene062952.t1	MTR_1g063260	41.892	74	40	2	5	76	23	95	2.44e-11	55.5
MS.gene062952.t1	MTR_5g008380	78.125	32	7	0	57	88	246	277	2.86e-11	57.8
MS.gene062952.t1	MTR_1g063300	43.077	65	34	2	14	76	30	93	3.97e-11	54.7
MS.gene062952.t1	MTR_7g104940	36.986	73	41	2	13	85	44	111	7.28e-11	54.7
MS.gene062952.t1	MTR_7g104950	34.722	72	46	1	14	85	41	111	8.01e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062952.t1	AT4G38840	73.529	68	17	1	22	88	32	99	3.28e-35	115
MS.gene062952.t1	AT5G18060	59.756	82	28	2	8	88	13	90	5.31e-32	107
MS.gene062952.t1	AT5G18020	55.000	80	35	1	10	88	11	90	8.02e-32	107
MS.gene062952.t1	AT5G18080	56.250	80	34	1	10	88	11	90	9.29e-32	106
MS.gene062952.t1	AT2G21210	49.474	95	41	2	1	88	1	95	2.63e-31	105
MS.gene062952.t1	AT4G34800	54.444	90	36	2	1	87	1	88	2.73e-31	105
MS.gene062952.t1	AT5G18050	55.000	80	35	1	10	88	11	90	3.10e-31	105
MS.gene062952.t1	AT5G18010	55.000	80	35	1	10	88	11	90	5.92e-31	104
MS.gene062952.t1	AT2G21210	49.474	95	41	2	1	88	68	162	9.68e-31	106
MS.gene062952.t1	AT5G18030	62.500	72	26	1	18	88	17	88	1.33e-30	103
MS.gene062952.t1	AT4G38825	58.667	75	30	1	15	88	15	89	4.00e-30	102
MS.gene062952.t1	AT4G34810	63.636	77	23	2	14	85	38	114	4.59e-30	103
MS.gene062952.t1	AT2G21200	61.972	71	26	1	17	86	15	85	1.09e-29	101
MS.gene062952.t1	AT4G38850	56.098	82	26	2	8	86	13	87	5.99e-29	99.8
MS.gene062952.t1	AT4G34770	61.538	78	27	2	11	85	22	99	3.92e-28	98.2
MS.gene062952.t1	AT3G03840	61.429	70	25	1	19	86	23	92	9.40e-28	97.1
MS.gene062952.t1	AT4G13790	50.000	86	38	2	3	86	8	90	2.64e-27	95.5
MS.gene062952.t1	AT3G03820	52.273	88	39	1	2	86	6	93	6.22e-27	94.7
MS.gene062952.t1	AT4G34780	61.972	71	24	1	21	88	26	96	2.37e-26	93.6
MS.gene062952.t1	AT3G03850	62.687	67	23	1	24	88	26	92	2.79e-26	93.2
MS.gene062952.t1	AT4G34790	60.870	69	25	1	23	89	39	107	8.92e-26	92.4
MS.gene062952.t1	AT3G03830	60.294	68	24	1	22	86	23	90	4.83e-25	89.7
MS.gene062952.t1	AT4G38860	46.154	91	38	1	6	85	12	102	3.34e-24	88.2
MS.gene062952.t1	AT2G21220	56.923	65	27	1	21	85	38	101	1.66e-22	84.0
MS.gene062952.t1	AT1G75580	58.462	65	26	1	21	85	42	105	4.57e-22	82.8
MS.gene062952.t1	AT4G34760	56.923	65	27	1	21	85	41	104	8.84e-22	82.0
MS.gene062952.t1	AT3G20220	53.623	69	30	2	23	90	47	114	2.39e-20	79.0
MS.gene062952.t1	AT3G43120	53.030	66	30	1	15	80	71	135	1.16e-19	78.2
MS.gene062952.t1	AT1G19830	58.333	60	24	1	21	80	46	104	2.53e-19	76.3
MS.gene062952.t1	AT4G36110	45.349	86	41	2	5	85	17	101	2.68e-19	75.9
MS.gene062952.t1	AT2G16580	53.846	65	29	1	21	85	42	105	3.10e-19	75.5
MS.gene062952.t1	AT5G20810	54.545	66	29	1	15	80	71	135	1.09e-18	75.9
MS.gene062952.t1	AT5G20810	54.545	66	29	1	15	80	71	135	1.91e-18	75.9
MS.gene062952.t1	AT2G18010	48.611	72	36	1	14	85	39	109	5.64e-18	72.4
MS.gene062952.t1	AT2G37030	53.968	63	28	1	22	84	48	109	1.04e-17	72.0
MS.gene062952.t1	AT5G66260	42.697	89	45	2	5	88	11	98	1.56e-17	71.2
MS.gene062952.t1	AT1G75590	46.429	84	37	3	4	80	16	98	2.33e-16	69.3
MS.gene062952.t1	AT3G51200	50.794	63	29	2	22	83	38	99	3.20e-16	67.8
MS.gene062952.t1	AT3G12830	42.045	88	46	2	2	89	33	115	3.78e-16	68.6
MS.gene062952.t1	AT1G19840	45.783	83	38	2	4	80	16	97	5.22e-16	68.6
MS.gene062952.t1	AT5G10990	52.542	59	27	1	22	80	40	97	1.69e-15	67.0
MS.gene062952.t1	AT4G34750	44.928	69	37	1	22	90	36	103	2.09e-15	67.0
MS.gene062952.t1	AT4G34750	44.928	69	37	1	22	90	36	103	2.09e-15	67.0
MS.gene062952.t1	AT3G53250	47.619	63	29	1	22	84	51	109	2.43e-15	66.2
MS.gene062952.t1	AT3G61900	51.613	62	26	2	22	80	29	89	3.44e-15	66.2
MS.gene062952.t1	AT3G53250	47.619	63	29	1	22	84	82	140	3.80e-15	66.2
MS.gene062952.t1	AT4G12410	45.946	74	33	3	23	90	76	148	8.57e-15	65.5
MS.gene062952.t1	AT2G46690	46.377	69	33	2	15	80	16	83	9.87e-15	64.7
MS.gene062952.t1	AT4G31320	52.459	61	28	1	23	83	80	139	2.05e-14	65.1
MS.gene062952.t1	AT2G24400	54.098	61	27	1	23	83	64	123	3.49e-14	64.3
MS.gene062952.t1	AT4G22620	43.243	74	35	3	23	90	79	151	6.58e-14	63.2
MS.gene062952.t1	AT4G00880	55.000	60	24	2	23	80	28	86	9.58e-14	62.0
MS.gene062952.t1	AT2G45210	41.667	72	38	2	18	86	74	144	1.03e-13	62.8
MS.gene062952.t1	AT3G60690	44.776	67	33	2	23	86	88	153	1.67e-13	62.4
MS.gene062952.t1	AT5G53590	44.776	67	31	2	22	83	45	110	8.36e-13	60.1
MS.gene062952.t1	AT1G56150	44.776	67	36	1	23	89	38	103	9.79e-13	59.3
MS.gene062952.t1	AT3G09870	49.231	65	30	2	14	76	36	99	1.31e-12	58.9
MS.gene062952.t1	AT2G36210	33.735	83	55	0	8	90	39	121	2.93e-12	58.5
MS.gene062952.t1	AT1G16510	43.284	67	37	1	23	89	54	119	3.12e-12	58.5
MS.gene062952.t1	AT5G03310	47.059	68	29	3	22	83	38	104	3.92e-12	57.8
MS.gene062952.t1	AT4G09530	42.623	61	32	2	23	80	28	88	7.04e-12	56.6
MS.gene062952.t1	AT2G28085	40.845	71	36	3	22	87	54	123	1.54e-11	56.2

Find 23 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCAAGCCGAGGAACAATT+TGG	0.319288	4.2:+35596717	MS.gene062952:CDS
GGTTGGTTCAAGTATGATAA+TGG	0.346232	4.2:-35596675	None:intergenic
TTCAACAATTCTTGAAATGA+TGG	0.426655	4.2:-35596696	None:intergenic
TATACAGCAAGATATCCTTT+TGG	0.429870	4.2:-35596621	None:intergenic
GTTGGTTCAAGTATGATAAT+GGG	0.450694	4.2:-35596674	None:intergenic
ACAATTCTTGAAATGATGGT+TGG	0.477096	4.2:-35596692	None:intergenic
TTTGGATATGACCATCCAAC+TGG	0.495574	4.2:+35596735	MS.gene062952:CDS
GGATATCTTGCTGTATATGT+TGG	0.497365	4.2:+35596627	MS.gene062952:CDS
TGCAGCCCTTCTGATGATAC+CGG	0.502907	4.2:-35596568	None:intergenic
GCAAACCAAACATCTTCAAA+AGG	0.517227	4.2:+35596588	MS.gene062952:CDS
GTCATATCCAAATTGTTCCT+CGG	0.520084	4.2:-35596724	None:intergenic
TCTTAGATATTACTTCTCGT+TGG	0.526588	4.2:+35596790	MS.gene062952:CDS
GTTTAACCGGTATCATCAGA+AGG	0.526691	4.2:+35596562	MS.gene062952:CDS
AAAGGTGTGGATGTGCCAAA+AGG	0.556547	4.2:+35596606	MS.gene062952:CDS
CCAAACATCTTCAAAAGGTG+TGG	0.565340	4.2:+35596593	MS.gene062952:CDS
AAGAAAACGTCTTCTCTGCA+AGG	0.585314	4.2:-35596771	None:intergenic
TTGTGAGACCACCAGTTGGA+TGG	0.601486	4.2:-35596746	None:intergenic
AGAATTGTTGAATCAAGCCG+AGG	0.619146	4.2:+35596707	MS.gene062952:CDS
TCTTGCTGTATATGTTGGAG+AGG	0.626395	4.2:+35596632	MS.gene062952:CDS
TTTAACCGGTATCATCAGAA+GGG	0.636274	4.2:+35596563	MS.gene062952:CDS
GGAATTGTGAGACCACCAGT+TGG	0.640247	4.2:-35596750	None:intergenic
ATGTTGGAGAGGAAATGAAG+AGG	0.665037	4.2:+35596643	MS.gene062952:CDS
GGATATGACCATCCAACTGG+TGG	0.668642	4.2:+35596738	MS.gene062952:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCAACAATTCTTGAAATGA+TGG	-	chr4.2:35596699-35596718	None:intergenic	25.0%
	ACAATTCTTGAAATGATGGT+TGG	-	chr4.2:35596695-35596714	None:intergenic	30.0%
	TCTTAGATATTACTTCTCGT+TGG	+	chr4.2:35596790-35596809	MS.gene062952:CDS	30.0%
!	GTTGGTTCAAGTATGATAAT+GGG	-	chr4.2:35596677-35596696	None:intergenic	30.0%
!	TATACAGCAAGATATCCTTT+TGG	-	chr4.2:35596624-35596643	None:intergenic	30.0%
	GCAAACCAAACATCTTCAAA+AGG	+	chr4.2:35596588-35596607	MS.gene062952:CDS	35.0%
	GTCATATCCAAATTGTTCCT+CGG	-	chr4.2:35596727-35596746	None:intergenic	35.0%
	TTTAACCGGTATCATCAGAA+GGG	+	chr4.2:35596563-35596582	MS.gene062952:CDS	35.0%
!	GGATATCTTGCTGTATATGT+TGG	+	chr4.2:35596627-35596646	MS.gene062952:CDS	35.0%
!	GGTTGGTTCAAGTATGATAA+TGG	-	chr4.2:35596678-35596697	None:intergenic	35.0%
	AAGAAAACGTCTTCTCTGCA+AGG	-	chr4.2:35596774-35596793	None:intergenic	40.0%
	AATCAAGCCGAGGAACAATT+TGG	+	chr4.2:35596717-35596736	MS.gene062952:CDS	40.0%
	AGAATTGTTGAATCAAGCCG+AGG	+	chr4.2:35596707-35596726	MS.gene062952:CDS	40.0%
	ATGTTGGAGAGGAAATGAAG+AGG	+	chr4.2:35596643-35596662	MS.gene062952:CDS	40.0%
	CCAAACATCTTCAAAAGGTG+TGG	+	chr4.2:35596593-35596612	MS.gene062952:CDS	40.0%
	GTTTAACCGGTATCATCAGA+AGG	+	chr4.2:35596562-35596581	MS.gene062952:CDS	40.0%
	TTTGGATATGACCATCCAAC+TGG	+	chr4.2:35596735-35596754	MS.gene062952:CDS	40.0%
!	TCTTGCTGTATATGTTGGAG+AGG	+	chr4.2:35596632-35596651	MS.gene062952:CDS	40.0%
!!	CCACACCTTTTGAAGATGTT+TGG	-	chr4.2:35596596-35596615	None:intergenic	40.0%
!	AAAGGTGTGGATGTGCCAAA+AGG	+	chr4.2:35596606-35596625	MS.gene062952:CDS	45.0%
	GGAATTGTGAGACCACCAGT+TGG	-	chr4.2:35596753-35596772	None:intergenic	50.0%
	GGATATGACCATCCAACTGG+TGG	+	chr4.2:35596738-35596757	MS.gene062952:CDS	50.0%
	TGCAGCCCTTCTGATGATAC+CGG	-	chr4.2:35596571-35596590	None:intergenic	50.0%
	TTGTGAGACCACCAGTTGGA+TGG	-	chr4.2:35596749-35596768	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35596552	35596824	35596552	ID=MS.gene062952
chr4.2	mRNA	35596552	35596824	35596552	ID=MS.gene062952.t1;Parent=MS.gene062952
chr4.2	exon	35596552	35596824	35596552	ID=MS.gene062952.t1.exon1;Parent=MS.gene062952.t1
chr4.2	CDS	35596552	35596824	35596552	ID=cds.MS.gene062952.t1;Parent=MS.gene062952.t1

Gene Sequence	>MS.gene062952 ATGGGTTTTCGTTTAACCGGTATCATCAGAAGGGCTGCAAACCAAACATCTTCAAAAGGTGTGGATGTGCCAAAAGGATATCTTGCTGTATATGTTGGAGAGGAAATGAAGAGGTTTGTGATCCCATTATCATACTTGAACCAACCATCATTTCAAGAATTGTTGAATCAAGCCGAGGAACAATTTGGATATGACCATCCAACTGGTGGTCTCACAATTCCTTGCAGAGAAGACGTTTTCTTAGATATTACTTCTCGTTGGAATCTGTGCTAA
Protein sequence	>MS.gene062952.t1 MGFRLTGIIRRAANQTSSKGVDVPKGYLAVYVGEEMKRFVIPLSYLNQPSFQELLNQAEEQFGYDHPTGGLTIPCREDVFLDITSRWNLC