AlfalfaGEDB | MS.gene003599

M. sativa cultivar XinJiangDaYe / MS.gene003599

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003599.t1	XP_003607131.1	95.4	87	4	0	1	87	1	87	9.80E-41	175.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003599.t1	P33080	72.5	91	18	2	1	85	1	90	9.3e-32	137.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003599.t1	G7JL53	95.4	87	4	0	1	87	1	87	7.0e-41	175.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003599	MS.gene75672	PPI
MS.gene79890	MS.gene003599	PPI
MS.gene003599	MS.gene50654	PPI
MS.gene003615	MS.gene003599	PPI
MS.gene062973	MS.gene003599	PPI
MS.gene77526	MS.gene003599	PPI
MS.gene047517	MS.gene003599	PPI
MS.gene003599	MS.gene014670	PPI
MS.gene003599	MS.gene77524	PPI
MS.gene045360	MS.gene003599	PPI
MS.gene057818	MS.gene003599	PPI
MS.gene003599	MS.gene79887	PPI
MS.gene50687	MS.gene003599	PPI
MS.gene75677	MS.gene003599	PPI
MS.gene003599	MS.gene75679	PPI
MS.gene003599	MS.gene40325	PPI
MS.gene057795	MS.gene003599	PPI
MS.gene68165	MS.gene003599	PPI
MS.gene045361	MS.gene003599	PPI
MS.gene003599	MS.gene50684	PPI
MS.gene50675	MS.gene003599	PPI
MS.gene003591	MS.gene003599	PPI
MS.gene003599	MS.gene057797	PPI
MS.gene003599	MS.gene003614	PPI
MS.gene003599	MS.gene014668	PPI
MS.gene062979	MS.gene003599	PPI
MS.gene003599	MS.gene77528	PPI
MS.gene003599	MS.gene79886	PPI
MS.gene003599	MS.gene014671	PPI
MS.gene003599	MS.gene50765	PPI
MS.gene003590	MS.gene003599	PPI
MS.gene003599	MS.gene003596	PPI
MS.gene062943	MS.gene003599	PPI
MS.gene01358	MS.gene003599	PPI
MS.gene003608	MS.gene003599	PPI
MS.gene003599	MS.gene062974	PPI
MS.gene40326	MS.gene003599	PPI
MS.gene003599	MS.gene003583	PPI
MS.gene003599	MS.gene062951	PPI
MS.gene003599	MS.gene057801	PPI
MS.gene003599	MS.gene77527	PPI
MS.gene003599	MS.gene79891	PPI
MS.gene003599	MS.gene68162	PPI
MS.gene003599	MS.gene045367	PPI
MS.gene003599	MS.gene045364	PPI
MS.gene003599	MS.gene045363	PPI
MS.gene003599	MS.gene75675	PPI
MS.gene50676	MS.gene003599	PPI
MS.gene23370	MS.gene003599	PPI
MS.gene50766	MS.gene003599	PPI
MS.gene003594	MS.gene003599	PPI
MS.gene003599	MS.gene50652	PPI
MS.gene50677	MS.gene003599	PPI
MS.gene003599	MS.gene002380	PPI
MS.gene003625	MS.gene003599	PPI
MS.gene003586	MS.gene003599	PPI
MS.gene50763	MS.gene003599	PPI
MS.gene003599	MS.gene75315	PPI
MS.gene003599	MS.gene68164	PPI
MS.gene003599	MS.gene68759	PPI
MS.gene50659	MS.gene003599	PPI
MS.gene75316	MS.gene003599	PPI
MS.gene057790	MS.gene003599	PPI
MS.gene062952	MS.gene003599	PPI
MS.gene003624	MS.gene003599	PPI
MS.gene23371	MS.gene003599	PPI
MS.gene031199	MS.gene003599	PPI
MS.gene003599	MS.gene014223	PPI
MS.gene77529	MS.gene003599	PPI
MS.gene68761	MS.gene003599	PPI
MS.gene014667	MS.gene003599	PPI
MS.gene68760	MS.gene003599	PPI
MS.gene75676	MS.gene003599	PPI
MS.gene50665	MS.gene003599	PPI
MS.gene003599	MS.gene014669	PPI
MS.gene003599	MS.gene057808	PPI
MS.gene057778	MS.gene003599	PPI
MS.gene062988	MS.gene003599	PPI
MS.gene75673	MS.gene003599	PPI
MS.gene045366	MS.gene003599	PPI
MS.gene062963	MS.gene003599	PPI
MS.gene003599	MS.gene68163	PPI
MS.gene75674	MS.gene003599	PPI
MS.gene031200	MS.gene003599	PPI
MS.gene045365	MS.gene003599	PPI
MS.gene003602	MS.gene003599	PPI
MS.gene23372	MS.gene003599	PPI
MS.gene003599	MS.gene79889	PPI
MS.gene003627	MS.gene003599	PPI
MS.gene003599	MS.gene014222	PPI
MS.gene003577	MS.gene003599	PPI
MS.gene003599	MS.gene79888	PPI
MS.gene062984	MS.gene003599	PPI
MS.gene003599	MS.gene75678	PPI
MS.gene003599	MS.gene75314	PPI
MS.gene003599	MS.gene01764	PPI
MS.gene40327	MS.gene003599	PPI
MS.gene031201	MS.gene003599	PPI
MS.gene003599	MS.gene79885	PPI
MS.gene045362	MS.gene003599	PPI
MS.gene003599	MS.gene031198	PPI
MS.gene77523	MS.gene003599	PPI
MS.gene003587	MS.gene003599	PPI
MS.gene003599	MS.gene50764	PPI
MS.gene045368	MS.gene003599	PPI
MS.gene063112	MS.gene003599	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003599.t1	MTR_4g072580	95.402	87	4	0	1	87	1	87	6.19e-59	175
MS.gene003599.t1	MTR_4g072600	90.805	87	8	0	1	87	1	87	5.50e-55	165
MS.gene003599.t1	MTR_4g072370	82.222	90	13	1	1	87	1	90	2.89e-51	155
MS.gene003599.t1	MTR_4g072830	83.146	89	12	1	1	86	1	89	2.48e-50	153
MS.gene003599.t1	MTR_4g072740	81.176	85	16	0	1	85	1	85	4.72e-50	152
MS.gene003599.t1	MTR_4g072490	81.176	85	16	0	1	85	1	85	6.00e-50	152
MS.gene003599.t1	MTR_4g072610	80.460	87	16	1	1	87	1	86	2.67e-48	148
MS.gene003599.t1	MTR_4g072470	81.176	85	16	0	1	85	1	85	3.34e-48	147
MS.gene003599.t1	MTR_4g072630	77.907	86	18	1	1	85	1	86	4.54e-47	145
MS.gene003599.t1	MTR_4g072650	79.310	87	17	1	1	87	1	86	1.52e-46	144
MS.gene003599.t1	MTR_4g072330	74.444	90	20	1	1	87	1	90	5.84e-46	142
MS.gene003599.t1	MTR_4g072465	75.581	86	20	1	1	85	1	86	6.40e-45	139
MS.gene003599.t1	MTR_4g072540	83.721	86	13	1	1	85	1	86	7.72e-45	139
MS.gene003599.t1	MTR_4g072310	71.429	91	20	1	1	85	1	91	4.93e-44	137
MS.gene003599.t1	MTR_4g072870	69.231	91	22	1	1	85	1	91	5.54e-44	137
MS.gene003599.t1	MTR_3g084150	72.527	91	18	2	1	85	1	90	2.15e-43	135
MS.gene003599.t1	MTR_4g072670	81.395	86	15	1	1	85	1	86	2.56e-43	135
MS.gene003599.t1	MTR_5g008350	83.784	74	12	0	1	74	1	74	3.34e-43	135
MS.gene003599.t1	MTR_4g072220	69.231	91	22	1	1	85	1	91	4.19e-43	135
MS.gene003599.t1	MTR_4g072240	67.033	91	24	1	1	85	1	91	8.05e-43	134
MS.gene003599.t1	MTR_4g072720	79.070	86	17	1	1	85	1	86	9.44e-43	134
MS.gene003599.t1	MTR_3g084180	71.429	91	19	2	1	85	1	90	1.36e-42	134
MS.gene003599.t1	MTR_4g072510	80.233	86	16	1	1	85	1	86	1.48e-42	133
MS.gene003599.t1	MTR_4g072880	69.231	91	22	1	1	85	1	91	1.95e-42	133
MS.gene003599.t1	MTR_4g072820	77.647	85	17	2	1	84	1	84	2.45e-42	133
MS.gene003599.t1	MTR_3g084240	68.889	90	23	1	1	85	1	90	3.45e-42	133
MS.gene003599.t1	MTR_4g072260	67.033	91	24	1	1	85	1	91	6.29e-42	132
MS.gene003599.t1	MTR_8g461410	70.330	91	20	2	1	85	1	90	7.78e-42	132
MS.gene003599.t1	MTR_4g072300	65.934	91	25	1	1	85	1	91	9.30e-42	132
MS.gene003599.t1	MTR_3g110038	68.889	90	23	1	1	85	1	90	1.08e-41	131
MS.gene003599.t1	MTR_3g084170	68.889	90	23	1	1	85	1	90	1.17e-41	131
MS.gene003599.t1	MTR_4g072890	65.934	91	25	1	1	85	1	91	1.65e-41	131
MS.gene003599.t1	MTR_4g072380	74.699	83	20	1	1	82	1	83	2.65e-41	130
MS.gene003599.t1	MTR_4g072690	80.000	85	17	0	1	85	1	85	2.97e-41	130
MS.gene003599.t1	MTR_4g072230	73.034	89	16	2	1	83	1	87	4.37e-41	130
MS.gene003599.t1	MTR_4g072480	67.778	90	24	1	1	85	1	90	5.99e-41	129
MS.gene003599.t1	MTR_4g072660	69.512	82	25	0	1	82	1	82	3.68e-40	127
MS.gene003599.t1	MTR_4g072250	70.330	91	20	2	1	85	1	90	4.36e-40	127
MS.gene003599.t1	MTR_4g072620	65.556	90	26	1	1	85	1	90	7.14e-40	127
MS.gene003599.t1	MTR_3g117630	69.318	88	21	1	4	85	3	90	8.70e-40	127
MS.gene003599.t1	MTR_3g110032	65.934	91	25	1	1	85	1	91	1.37e-39	126
MS.gene003599.t1	MTR_4g072570	67.778	90	24	1	1	85	1	90	1.46e-39	126
MS.gene003599.t1	MTR_4g072680	65.556	90	26	1	1	85	1	90	1.79e-39	126
MS.gene003599.t1	MTR_3g084220	65.556	90	26	1	1	85	1	90	1.88e-39	126
MS.gene003599.t1	MTR_3g084250	67.778	90	24	1	1	85	1	90	1.92e-39	126
MS.gene003599.t1	MTR_4g072590	76.471	85	20	0	1	85	1	85	2.22e-39	125
MS.gene003599.t1	MTR_4g072730	65.556	90	26	1	1	85	1	90	2.26e-39	125
MS.gene003599.t1	MTR_4g050700	65.934	91	25	1	1	85	1	91	5.36e-39	125
MS.gene003599.t1	MTR_2g012410	65.934	91	25	1	1	85	1	91	5.36e-39	125
MS.gene003599.t1	MTR_4g072450	76.471	85	20	0	1	85	1	85	6.72e-39	124
MS.gene003599.t1	MTR_4g072270	65.909	88	24	1	1	82	1	88	1.13e-38	124
MS.gene003599.t1	MTR_3g110042	71.591	88	18	2	1	82	1	87	3.40e-38	123
MS.gene003599.t1	MTR_4g072460	63.333	90	28	1	1	85	1	90	3.79e-38	122
MS.gene003599.t1	MTR_4g072860	68.132	91	23	1	1	85	1	91	3.82e-38	122
MS.gene003599.t1	MTR_8g461420	67.033	91	25	1	1	86	1	91	7.08e-38	122
MS.gene003599.t1	MTR_3g084190	65.934	91	26	1	1	86	1	91	7.31e-38	122
MS.gene003599.t1	MTR_4g072500	64.835	91	25	2	1	85	1	90	1.02e-37	121
MS.gene003599.t1	MTR_4g072850	68.817	93	22	1	1	86	1	93	1.23e-37	121
MS.gene003599.t1	MTR_3g084260	64.835	91	26	1	1	85	1	91	1.81e-37	121
MS.gene003599.t1	MTR_3g084230	65.934	91	26	1	1	86	1	91	2.82e-37	120
MS.gene003599.t1	MTR_4g072640	64.130	92	26	2	1	86	1	91	5.32e-37	120
MS.gene003599.t1	MTR_4g072530	62.637	91	27	2	1	85	1	90	1.35e-36	119
MS.gene003599.t1	MTR_3g084160	63.736	91	28	1	1	86	1	91	1.35e-35	116
MS.gene003599.t1	MTR_3g084210	63.333	90	28	1	1	85	1	90	2.91e-35	115
MS.gene003599.t1	MTR_3g110045	65.169	89	26	1	3	86	62	150	3.79e-35	117
MS.gene003599.t1	MTR_5g008360	69.333	75	23	0	11	85	7	81	5.23e-35	114
MS.gene003599.t1	MTR_4g072940	67.778	90	22	1	3	85	33	122	8.56e-35	115
MS.gene003599.t1	MTR_4g072980	57.647	85	35	1	1	84	8	92	1.04e-33	111
MS.gene003599.t1	MTR_5g008370	76.812	69	16	0	17	85	22	90	2.52e-33	112
MS.gene003599.t1	MTR_3g117640	67.143	70	22	1	19	87	33	102	1.13e-32	109
MS.gene003599.t1	MTR_4g072770	65.882	85	22	2	1	84	1	79	1.22e-32	108
MS.gene003599.t1	MTR_4g072550	67.606	71	23	0	15	85	31	101	3.28e-32	108
MS.gene003599.t1	MTR_4g072910	65.333	75	25	1	11	85	27	100	8.21e-32	107
MS.gene003599.t1	MTR_4g072560	68.657	67	20	1	19	84	31	97	1.30e-31	106
MS.gene003599.t1	MTR_3g084200	65.278	72	20	1	1	67	1	72	2.61e-30	103
MS.gene003599.t1	MTR_4g072290	56.471	85	29	1	1	85	1	77	5.16e-28	96.7
MS.gene003599.t1	MTR_3g110035	67.188	64	21	0	22	85	73	136	3.61e-27	96.7
MS.gene003599.t1	MTR_4g072280	58.667	75	25	1	1	69	1	75	3.77e-26	92.0
MS.gene003599.t1	MTR_4g072750	58.750	80	26	2	1	73	1	80	1.59e-25	90.9
MS.gene003599.t1	MTR_6g077850	57.353	68	29	0	19	86	33	100	1.80e-24	88.6
MS.gene003599.t1	MTR_3g113310	55.224	67	29	1	18	84	40	105	5.20e-24	87.4
MS.gene003599.t1	MTR_4g072190	51.190	84	36	2	5	84	17	99	5.80e-24	87.4
MS.gene003599.t1	MTR_3g117610	56.522	69	29	1	18	86	43	110	1.25e-23	86.7
MS.gene003599.t1	MTR_4g072930	51.250	80	35	1	10	85	31	110	3.88e-23	85.5
MS.gene003599.t1	MTR_5g021820	48.052	77	37	2	10	84	28	103	2.09e-20	78.2
MS.gene003599.t1	MTR_4g072840	54.118	85	12	3	1	84	1	59	2.46e-19	74.3
MS.gene003599.t1	MTR_8g076040	54.688	64	28	1	19	82	40	102	2.64e-19	75.5
MS.gene003599.t1	MTR_2g043960	55.932	59	25	1	19	77	75	132	2.65e-17	72.0
MS.gene003599.t1	MTR_1g009150	52.174	69	32	1	12	80	63	130	3.06e-17	72.0
MS.gene003599.t1	MTR_1g094750	51.613	62	29	1	19	80	49	109	3.89e-17	70.5
MS.gene003599.t1	MTR_8g461400	43.333	90	20	2	1	85	1	64	8.82e-17	68.2
MS.gene003599.t1	MTR_4g124750	54.237	59	26	1	19	77	68	125	1.19e-16	70.1
MS.gene003599.t1	MTR_1g063950	45.588	68	36	1	13	80	41	107	6.03e-16	67.4
MS.gene003599.t1	MTR_7g101740	50.000	64	31	1	19	82	39	101	7.45e-16	67.0
MS.gene003599.t1	MTR_4g025830	41.667	72	38	2	17	85	76	146	8.08e-16	68.2
MS.gene003599.t1	MTR_7g118010	39.286	84	48	2	5	86	8	90	9.84e-16	66.6
MS.gene003599.t1	MTR_8g461210	48.529	68	34	1	19	86	34	100	1.19e-15	66.6
MS.gene003599.t1	MTR_1g024085	40.659	91	45	2	4	86	13	102	2.48e-15	66.6
MS.gene003599.t1	MTR_4g005310	48.387	62	31	1	20	80	62	123	2.60e-15	66.6
MS.gene003599.t1	MTR_3g092220	47.826	69	33	2	11	77	24	91	3.18e-15	65.5
MS.gene003599.t1	MTR_1g061570	51.613	62	29	1	19	80	18	78	3.24e-15	65.9
MS.gene003599.t1	MTR_4g005320	50.820	61	29	1	20	80	70	129	4.67e-15	66.2
MS.gene003599.t1	MTR_3g105900	67.442	43	14	0	18	60	1170	1212	8.20e-15	68.2
MS.gene003599.t1	MTR_0388s0020	39.744	78	43	2	11	85	66	142	1.00e-14	65.1
MS.gene003599.t1	MTR_4g072160	43.590	78	41	2	10	86	27	102	1.21e-14	64.7
MS.gene003599.t1	MTR_8g026730	42.029	69	37	2	20	86	27	94	3.98e-14	62.4
MS.gene003599.t1	MTR_3g109160	49.180	61	30	1	20	80	69	128	4.83e-13	61.2
MS.gene003599.t1	MTR_8g101520	43.939	66	36	1	21	86	51	115	2.87e-12	58.9
MS.gene003599.t1	MTR_4g021810	47.761	67	33	2	12	77	18	83	7.94e-12	56.6
MS.gene003599.t1	MTR_2g095430	45.833	72	32	3	8	73	31	101	9.29e-12	57.0
MS.gene003599.t1	MTR_5g008380	78.125	32	7	0	54	85	246	277	1.02e-11	58.9
MS.gene003599.t1	MTR_2g066830	36.842	76	46	2	2	77	41	114	1.24e-11	57.0
MS.gene003599.t1	MTR_8g096470	40.909	66	38	1	21	86	47	111	3.08e-11	55.1
MS.gene003599.t1	MTR_1g059770	37.500	64	39	1	21	84	50	112	3.13e-11	55.5
MS.gene003599.t1	MTR_7g405740	37.838	74	45	1	7	80	54	126	3.58e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003599.t1	AT4G38840	72.059	68	18	1	19	85	32	99	3.82e-34	112
MS.gene003599.t1	AT5G18020	61.250	80	29	2	8	86	13	91	1.27e-32	108
MS.gene003599.t1	AT5G18080	64.103	78	26	2	8	84	13	89	1.46e-32	108
MS.gene003599.t1	AT2G21210	53.684	95	34	2	1	85	1	95	3.07e-32	108
MS.gene003599.t1	AT5G18060	61.538	78	28	2	8	84	13	89	1.18e-31	106
MS.gene003599.t1	AT2G21210	53.684	95	34	2	1	85	68	162	1.43e-31	108
MS.gene003599.t1	AT5G18030	61.538	78	26	2	8	84	13	87	2.00e-31	105
MS.gene003599.t1	AT5G18050	60.256	78	29	2	8	84	13	89	2.23e-31	105
MS.gene003599.t1	AT2G21200	60.494	81	29	2	7	84	6	86	2.96e-31	105
MS.gene003599.t1	AT5G18010	61.538	78	28	2	8	84	13	89	5.03e-31	104
MS.gene003599.t1	AT4G38825	61.972	71	26	1	15	84	18	88	3.48e-30	102
MS.gene003599.t1	AT3G03840	56.977	86	29	2	1	84	14	93	8.87e-30	101
MS.gene003599.t1	AT4G38850	58.750	80	26	2	8	84	13	88	9.53e-30	101
MS.gene003599.t1	AT4G34770	59.524	84	29	2	4	85	22	102	9.73e-30	102
MS.gene003599.t1	AT4G34800	55.952	84	33	2	1	80	1	84	1.31e-29	101
MS.gene003599.t1	AT4G34810	63.291	79	24	2	11	84	39	117	4.46e-29	100
MS.gene003599.t1	AT3G03850	59.756	82	27	2	5	84	14	91	1.53e-28	98.6
MS.gene003599.t1	AT3G03820	54.023	87	31	2	1	84	14	94	4.92e-28	97.4
MS.gene003599.t1	AT4G13790	47.619	84	42	1	3	84	8	91	6.38e-28	97.1
MS.gene003599.t1	AT3G03830	56.627	83	28	2	5	84	14	91	8.18e-27	94.4
MS.gene003599.t1	AT4G34780	61.111	72	25	1	18	86	26	97	3.61e-26	93.2
MS.gene003599.t1	AT4G34790	60.000	65	24	1	20	82	39	103	2.30e-24	88.6
MS.gene003599.t1	AT4G38860	56.923	65	28	0	18	82	38	102	1.12e-23	86.7
MS.gene003599.t1	AT1G75580	46.429	84	44	1	1	84	25	107	4.44e-22	82.8
MS.gene003599.t1	AT2G21220	46.667	90	37	2	5	84	15	103	4.81e-22	82.4
MS.gene003599.t1	AT4G34760	53.731	67	30	1	18	84	41	106	2.51e-21	80.9
MS.gene003599.t1	AT2G16580	53.846	65	29	1	18	82	42	105	2.02e-19	75.9
MS.gene003599.t1	AT1G19830	57.353	68	27	2	18	84	46	112	2.69e-19	75.9
MS.gene003599.t1	AT4G36110	46.512	86	37	3	5	82	17	101	9.05e-19	74.3
MS.gene003599.t1	AT3G20220	49.275	69	33	2	20	87	47	114	6.05e-18	72.4
MS.gene003599.t1	AT2G18010	51.562	64	30	1	19	82	47	109	7.63e-18	72.0
MS.gene003599.t1	AT3G43120	54.237	59	26	1	19	77	78	135	1.23e-17	72.8
MS.gene003599.t1	AT2G37030	43.590	78	43	1	4	81	33	109	8.70e-17	69.7
MS.gene003599.t1	AT5G20810	55.932	59	25	1	19	77	78	135	9.24e-17	70.9
MS.gene003599.t1	AT5G20810	55.932	59	25	1	19	77	78	135	1.95e-16	70.5
MS.gene003599.t1	AT4G34750	43.478	69	38	1	19	87	36	103	3.14e-16	68.9
MS.gene003599.t1	AT4G34750	43.478	69	38	1	19	87	36	103	3.14e-16	68.9
MS.gene003599.t1	AT5G66260	43.820	89	41	3	5	85	11	98	1.33e-15	65.9
MS.gene003599.t1	AT3G51200	44.872	78	37	3	8	80	23	99	2.84e-15	65.5
MS.gene003599.t1	AT1G75590	44.048	84	36	3	4	77	16	98	4.18e-15	66.2
MS.gene003599.t1	AT2G46690	44.444	72	36	2	9	77	13	83	1.54e-14	63.9
MS.gene003599.t1	AT3G53250	46.032	63	30	1	19	81	51	109	1.87e-14	63.9
MS.gene003599.t1	AT5G10990	47.458	59	30	1	19	77	40	97	2.25e-14	64.3
MS.gene003599.t1	AT1G19840	44.578	83	36	3	4	77	16	97	2.77e-14	63.9
MS.gene003599.t1	AT3G53250	46.032	63	30	1	19	81	82	140	3.31e-14	63.9
MS.gene003599.t1	AT3G61900	40.000	80	43	3	11	86	20	98	3.56e-14	63.2
MS.gene003599.t1	AT4G31320	47.945	73	36	2	9	80	68	139	2.11e-13	62.4
MS.gene003599.t1	AT2G24400	45.000	80	42	2	2	80	45	123	4.36e-13	61.2
MS.gene003599.t1	AT2G45210	37.838	74	42	2	15	85	74	146	8.73e-13	60.5
MS.gene003599.t1	AT4G00880	46.377	69	34	2	20	86	28	95	9.98e-13	59.3
MS.gene003599.t1	AT3G60690	41.176	68	36	2	20	84	88	154	1.25e-12	60.1
MS.gene003599.t1	AT4G12410	40.580	69	37	2	20	85	76	143	1.36e-12	59.7
MS.gene003599.t1	AT3G12830	39.189	74	44	1	11	84	41	113	4.16e-12	57.8
MS.gene003599.t1	AT4G22620	35.366	82	49	2	7	85	66	146	5.37e-12	58.2
MS.gene003599.t1	AT2G36210	38.806	67	41	0	21	87	55	121	1.72e-11	56.2
MS.gene003599.t1	AT5G53590	41.791	67	33	2	19	80	45	110	1.91e-11	56.6
MS.gene003599.t1	AT5G03310	44.776	67	32	2	19	80	38	104	2.74e-11	55.5
MS.gene003599.t1	AT1G56150	41.538	65	37	1	20	84	38	101	3.96e-11	55.1

Find 24 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTGAGGTATGATAT+TGG	0.321214	4.1:+30878928	None:intergenic
GTTGGTTGAGGTATGATATT+GGG	0.335335	4.1:+30878929	None:intergenic
TTCAATAAGTCTTGAAAAGA+AGG	0.380323	4.1:+30878907	None:intergenic
ATTCAAATTGTTCCTCAGCT+TGG	0.482856	4.1:+30878884	None:intergenic
ATAAGTCTTGAAAAGAAGGT+TGG	0.491442	4.1:+30878911	None:intergenic
TATACTGCTAGATATCCCTT+TGG	0.495517	4.1:+30878982	None:intergenic
TTTGAATATGATCATCCAAT+GGG	0.507762	4.1:-30878868	MS.gene003599:CDS
ATATCACTTCTCGTTTGAGT+AGG	0.532328	4.1:-30878807	MS.gene003599:CDS
GGGATATCTAGCAGTATATG+TGG	0.532379	4.1:-30878977	MS.gene003599:CDS
CTTGAAAAGAAGGTTGGTTG+AGG	0.533830	4.1:+30878917	None:intergenic
GTTTAGCTGGTATCCTCAGA+AGG	0.534213	4.1:-30879032	MS.gene003599:CDS
AGAAGGACATCATCTTCAAA+AGG	0.536345	4.1:-30879015	MS.gene003599:CDS
AAGAACATGTCTTCTTTGCA+AGG	0.542014	4.1:+30878832	None:intergenic
ATTTGAATATGATCATCCAA+TGG	0.547817	4.1:-30878869	MS.gene003599:CDS
TCTAGCAGTATATGTGGGAG+AGG	0.571467	4.1:-30878971	MS.gene003599:CDS
ATGTGGGAGAGGAAATGAAA+CGG	0.576130	4.1:-30878960	MS.gene003599:CDS
GACATCATCTTCAAAAGGTG+TGG	0.580448	4.1:-30879010	MS.gene003599:CDS
AAAGGTGTGGACATTCCAAA+GGG	0.583361	4.1:-30878997	MS.gene003599:CDS
AAAAGGTGTGGACATTCCAA+AGG	0.587266	4.1:-30878998	MS.gene003599:CDS
TTGAAGATGATGTCCTTCTG+AGG	0.597296	4.1:+30879019	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.1:+30878853	None:intergenic
GGATATCTAGCAGTATATGT+GGG	0.643461	4.1:-30878976	MS.gene003599:CDS
GAATATGATCATCCAATGGG+TGG	0.646056	4.1:-30878865	MS.gene003599:CDS
AGACTTATTGAACCAAGCTG+AGG	0.647261	4.1:-30878896	MS.gene003599:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTTGAATATGATCATCCAA+TGG	-	chr4.1:30878974-30878993	MS.gene003599:CDS	25.0%
!	TTCAATAAGTCTTGAAAAGA+AGG	+	chr4.1:30878939-30878958	None:intergenic	25.0%
!	TTTGAATATGATCATCCAAT+GGG	-	chr4.1:30878975-30878994	MS.gene003599:CDS	25.0%
	ATAAGTCTTGAAAAGAAGGT+TGG	+	chr4.1:30878935-30878954	None:intergenic	30.0%
	AAGAACATGTCTTCTTTGCA+AGG	+	chr4.1:30879014-30879033	None:intergenic	35.0%
	AGAAGGACATCATCTTCAAA+AGG	-	chr4.1:30878828-30878847	MS.gene003599:CDS	35.0%
	ATATCACTTCTCGTTTGAGT+AGG	-	chr4.1:30879036-30879055	MS.gene003599:CDS	35.0%
	ATTCAAATTGTTCCTCAGCT+TGG	+	chr4.1:30878962-30878981	None:intergenic	35.0%
	GGATATCTAGCAGTATATGT+GGG	-	chr4.1:30878867-30878886	MS.gene003599:CDS	35.0%
	GTTGGTTGAGGTATGATATT+GGG	+	chr4.1:30878917-30878936	None:intergenic	35.0%
	TATACTGCTAGATATCCCTT+TGG	+	chr4.1:30878864-30878883	None:intergenic	35.0%
	AGACTTATTGAACCAAGCTG+AGG	-	chr4.1:30878947-30878966	MS.gene003599:CDS	40.0%
	ATGTGGGAGAGGAAATGAAA+CGG	-	chr4.1:30878883-30878902	MS.gene003599:CDS	40.0%
	GAATATGATCATCCAATGGG+TGG	-	chr4.1:30878978-30878997	MS.gene003599:CDS	40.0%
	GACATCATCTTCAAAAGGTG+TGG	-	chr4.1:30878833-30878852	MS.gene003599:CDS	40.0%
	GGGATATCTAGCAGTATATG+TGG	-	chr4.1:30878866-30878885	MS.gene003599:CDS	40.0%
	TTGAAGATGATGTCCTTCTG+AGG	+	chr4.1:30878827-30878846	None:intergenic	40.0%
!	AAAAGGTGTGGACATTCCAA+AGG	-	chr4.1:30878845-30878864	MS.gene003599:CDS	40.0%
!	AAAGGTGTGGACATTCCAAA+GGG	-	chr4.1:30878846-30878865	MS.gene003599:CDS	40.0%
!	CTTGAAAAGAAGGTTGGTTG+AGG	+	chr4.1:30878929-30878948	None:intergenic	40.0%
!	GGTTGGTTGAGGTATGATAT+TGG	+	chr4.1:30878918-30878937	None:intergenic	40.0%
	GTTTAGCTGGTATCCTCAGA+AGG	-	chr4.1:30878811-30878830	MS.gene003599:CDS	45.0%
	TCTAGCAGTATATGTGGGAG+AGG	-	chr4.1:30878872-30878891	MS.gene003599:CDS	45.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.1:30878993-30879012	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30878801	30879064	30878801	ID=MS.gene003599
chr4.1	mRNA	30878801	30879064	30878801	ID=MS.gene003599.t1;Parent=MS.gene003599
chr4.1	exon	30878801	30879064	30878801	ID=MS.gene003599.t1.exon1;Parent=MS.gene003599.t1
chr4.1	CDS	30878801	30879064	30878801	ID=cds.MS.gene003599.t1;Parent=MS.gene003599.t1

Gene Sequence	>MS.gene003599 ATGGGTTTTCGTTTAGCTGGTATCCTCAGAAGGACATCATCTTCAAAAGGTGTGGACATTCCAAAGGGATATCTAGCAGTATATGTGGGAGAGGAAATGAAACGGTTTGTGATCCCAATATCATACCTCAACCAACCTTCTTTTCAAGACTTATTGAACCAAGCTGAGGAACAATTTGAATATGATCATCCAATGGGTGGTCTCACTATTCCTTGCAAAGAAGACATGTTCTTAGATATCACTTCTCGTTTGAGTAGGTGCTAA
Protein sequence	>MS.gene003599.t1 MGFRLAGILRRTSSSKGVDIPKGYLAVYVGEEMKRFVIPISYLNQPSFQDLLNQAEEQFEYDHPMGGLTIPCKEDMFLDITSRLSRC