AlfalfaGEDB | MS.gene003613

M. sativa cultivar XinJiangDaYe / MS.gene003613

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003613.t1	PNY03825.1	85.7	91	13	0	1	91	1	91	1.10E-37	165.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003613.t1	P33083	72.2	90	25	0	1	90	1	90	1.3e-31	136.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003613.t1	A0A2K3NLB0	85.7	91	13	0	1	91	1	91	7.7e-38	165.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062988	MS.gene003613	PPI
MS.gene75673	MS.gene003613	PPI
MS.gene77528	MS.gene003613	PPI
MS.gene50763	MS.gene003613	PPI
MS.gene031198	MS.gene003613	PPI
MS.gene031200	MS.gene003613	PPI
MS.gene045365	MS.gene003613	PPI
MS.gene003613	MS.gene50684	PPI
MS.gene045364	MS.gene003613	PPI
MS.gene50659	MS.gene003613	PPI
MS.gene003613	MS.gene014668	PPI
MS.gene75316	MS.gene003613	PPI
MS.gene003613	MS.gene79886	PPI
MS.gene003613	MS.gene50765	PPI
MS.gene057790	MS.gene003613	PPI
MS.gene003624	MS.gene003613	PPI
MS.gene23371	MS.gene003613	PPI
MS.gene031201	MS.gene003613	PPI
MS.gene75314	MS.gene003613	PPI
MS.gene68761	MS.gene003613	PPI
MS.gene68760	MS.gene003613	PPI
MS.gene003613	MS.gene79891	PPI
MS.gene75676	MS.gene003613	PPI
MS.gene003613	MS.gene045367	PPI
MS.gene003613	MS.gene045363	PPI
MS.gene77523	MS.gene003613	PPI
MS.gene057778	MS.gene003613	PPI
MS.gene045366	MS.gene003613	PPI
MS.gene003613	MS.gene50652	PPI
MS.gene003613	MS.gene014669	PPI
MS.gene003613	MS.gene057808	PPI
MS.gene003613	MS.gene002380	PPI
MS.gene062963	MS.gene003613	PPI
MS.gene75674	MS.gene003613	PPI
MS.gene79890	MS.gene003613	PPI
MS.gene003615	MS.gene003613	PPI
MS.gene062973	MS.gene003613	PPI
MS.gene003602	MS.gene003613	PPI
MS.gene23372	MS.gene003613	PPI
MS.gene047517	MS.gene003613	PPI
MS.gene003613	MS.gene68163	PPI
MS.gene003627	MS.gene003613	PPI
MS.gene003613	MS.gene75315	PPI
MS.gene003577	MS.gene003613	PPI
MS.gene77524	MS.gene003613	PPI
MS.gene003613	MS.gene68164	PPI
MS.gene062984	MS.gene003613	PPI
MS.gene057801	MS.gene003613	PPI
MS.gene014223	MS.gene003613	PPI
MS.gene40327	MS.gene003613	PPI
MS.gene003613	MS.gene014222	PPI
MS.gene003613	MS.gene79888	PPI
MS.gene045362	MS.gene003613	PPI
MS.gene003587	MS.gene003613	PPI
MS.gene003613	MS.gene79885	PPI
MS.gene003590	MS.gene003613	PPI
MS.gene045368	MS.gene003613	PPI
MS.gene062943	MS.gene003613	PPI
MS.gene063112	MS.gene003613	PPI
MS.gene003608	MS.gene003613	PPI
MS.gene77526	MS.gene003613	PPI
MS.gene045360	MS.gene003613	PPI
MS.gene057818	MS.gene003613	PPI
MS.gene50687	MS.gene003613	PPI
MS.gene75677	MS.gene003613	PPI
MS.gene003625	MS.gene003613	PPI
MS.gene057795	MS.gene003613	PPI
MS.gene003613	MS.gene75678	PPI
MS.gene003613	MS.gene01764	PPI
MS.gene68165	MS.gene003613	PPI
MS.gene045361	MS.gene003613	PPI
MS.gene003613	MS.gene75679	PPI
MS.gene50675	MS.gene003613	PPI
MS.gene003591	MS.gene003613	PPI
MS.gene062979	MS.gene003613	PPI
MS.gene40325	MS.gene003613	PPI
MS.gene01358	MS.gene003613	PPI
MS.gene003613	MS.gene50764	PPI
MS.gene75675	MS.gene003613	PPI
MS.gene003583	MS.gene003613	PPI
MS.gene003613	MS.gene014671	PPI
MS.gene40326	MS.gene003613	PPI
MS.gene062952	MS.gene003613	PPI
MS.gene77527	MS.gene003613	PPI
MS.gene003613	MS.gene75672	PPI
MS.gene031199	MS.gene003613	PPI
MS.gene003613	MS.gene50654	PPI
MS.gene003613	MS.gene062974	PPI
MS.gene50676	MS.gene003613	PPI
MS.gene003614	MS.gene003613	PPI
MS.gene057797	MS.gene003613	PPI
MS.gene23370	MS.gene003613	PPI
MS.gene50766	MS.gene003613	PPI
MS.gene77529	MS.gene003613	PPI
MS.gene014667	MS.gene003613	PPI
MS.gene003594	MS.gene003613	PPI
MS.gene003613	MS.gene014670	PPI
MS.gene003613	MS.gene062951	PPI
MS.gene003596	MS.gene003613	PPI
MS.gene50665	MS.gene003613	PPI
MS.gene003613	MS.gene68162	PPI
MS.gene79889	MS.gene003613	PPI
MS.gene50677	MS.gene003613	PPI
MS.gene68759	MS.gene003613	PPI
MS.gene003586	MS.gene003613	PPI
MS.gene003613	MS.gene79887	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003613.t1	MTR_4g072620	81.319	91	17	0	1	91	1	91	1.84e-54	164
MS.gene003613.t1	MTR_4g072730	82.418	91	16	0	1	91	1	91	2.07e-54	164
MS.gene003613.t1	MTR_4g072480	81.319	91	17	0	1	91	1	91	3.21e-54	163
MS.gene003613.t1	MTR_4g072680	81.319	91	17	0	1	91	1	91	3.71e-53	160
MS.gene003613.t1	MTR_4g072460	79.121	91	19	0	1	91	1	91	1.41e-51	157
MS.gene003613.t1	MTR_4g072570	83.516	91	15	0	1	91	1	91	4.60e-51	155
MS.gene003613.t1	MTR_4g072500	79.121	91	19	0	1	91	1	91	2.78e-50	153
MS.gene003613.t1	MTR_4g072530	78.889	90	19	0	1	90	1	90	5.66e-49	150
MS.gene003613.t1	MTR_4g072640	77.778	90	20	0	1	90	1	90	1.33e-47	147
MS.gene003613.t1	MTR_4g072660	74.725	91	18	1	1	91	1	86	3.95e-47	145
MS.gene003613.t1	MTR_4g072270	71.739	92	25	1	1	91	1	92	1.40e-46	144
MS.gene003613.t1	MTR_3g084150	75.824	91	22	0	1	91	1	91	4.75e-46	142
MS.gene003613.t1	MTR_4g072310	72.826	92	24	1	1	91	1	92	7.19e-46	142
MS.gene003613.t1	MTR_3g084180	74.725	91	23	0	1	91	1	91	4.41e-45	140
MS.gene003613.t1	MTR_8g461410	73.626	91	24	0	1	91	1	91	8.80e-45	139
MS.gene003613.t1	MTR_4g072860	72.826	92	24	1	1	91	1	92	1.35e-44	139
MS.gene003613.t1	MTR_4g072880	70.652	92	26	1	1	91	1	92	6.97e-44	137
MS.gene003613.t1	MTR_4g072250	72.826	92	23	2	1	91	1	91	6.78e-43	135
MS.gene003613.t1	MTR_4g072230	72.826	92	22	2	1	91	1	90	7.93e-43	134
MS.gene003613.t1	MTR_3g084240	69.231	91	28	0	1	91	1	91	3.88e-42	133
MS.gene003613.t1	MTR_5g008360	81.013	79	15	0	13	91	4	82	5.09e-42	132
MS.gene003613.t1	MTR_3g110042	74.713	87	22	0	1	87	1	87	5.58e-42	132
MS.gene003613.t1	MTR_3g084170	69.231	91	28	0	1	91	1	91	7.33e-42	132
MS.gene003613.t1	MTR_4g072240	67.033	91	29	1	1	90	1	91	1.02e-41	132
MS.gene003613.t1	MTR_5g008370	70.330	91	27	0	1	91	1	91	1.35e-41	133
MS.gene003613.t1	MTR_4g072870	68.132	91	28	1	1	90	1	91	2.11e-41	131
MS.gene003613.t1	MTR_4g050700	69.565	92	27	1	1	91	1	92	4.37e-41	130
MS.gene003613.t1	MTR_2g012410	69.565	92	27	1	1	91	1	92	4.37e-41	130
MS.gene003613.t1	MTR_3g117630	75.000	84	21	0	7	90	7	90	9.13e-41	129
MS.gene003613.t1	MTR_3g084220	67.033	91	30	0	1	91	1	91	1.43e-40	129
MS.gene003613.t1	MTR_4g072300	64.835	91	31	1	1	90	1	91	1.44e-40	129
MS.gene003613.t1	MTR_3g110032	70.652	92	26	1	1	91	1	92	2.39e-40	128
MS.gene003613.t1	MTR_4g072220	64.835	91	31	1	1	90	1	91	8.07e-40	127
MS.gene003613.t1	MTR_4g072330	68.889	90	26	1	1	90	1	88	9.94e-40	127
MS.gene003613.t1	MTR_4g072370	70.000	90	25	1	1	90	1	88	1.65e-39	126
MS.gene003613.t1	MTR_4g072850	69.565	92	26	1	1	90	1	92	1.93e-39	126
MS.gene003613.t1	MTR_3g084260	69.565	92	27	1	1	91	1	92	3.67e-39	125
MS.gene003613.t1	MTR_3g084250	67.033	91	30	0	1	91	1	91	9.45e-39	124
MS.gene003613.t1	MTR_4g072580	68.889	90	23	1	1	90	1	85	1.63e-38	124
MS.gene003613.t1	MTR_4g072600	70.000	90	22	1	1	90	1	85	2.24e-38	123
MS.gene003613.t1	MTR_4g072830	69.663	89	25	1	1	89	1	87	2.47e-38	123
MS.gene003613.t1	MTR_4g072490	66.667	90	25	1	1	90	1	85	2.72e-38	123
MS.gene003613.t1	MTR_4g072630	67.778	90	25	1	1	90	1	86	5.01e-38	122
MS.gene003613.t1	MTR_3g110038	64.444	90	32	0	1	90	1	90	7.27e-38	122
MS.gene003613.t1	MTR_4g072550	75.000	72	18	0	20	91	31	102	1.25e-37	122
MS.gene003613.t1	MTR_4g072470	68.889	90	23	1	1	90	1	85	1.28e-37	121
MS.gene003613.t1	MTR_4g072740	66.667	90	25	1	1	90	1	85	2.44e-37	120
MS.gene003613.t1	MTR_4g072890	61.538	91	34	1	1	90	1	91	2.57e-37	120
MS.gene003613.t1	MTR_4g072260	61.538	91	34	1	1	90	1	91	3.67e-37	120
MS.gene003613.t1	MTR_3g084210	65.934	91	31	0	1	91	1	91	7.76e-37	119
MS.gene003613.t1	MTR_4g072465	66.667	90	26	1	1	90	1	86	1.52e-36	119
MS.gene003613.t1	MTR_4g072940	67.778	90	27	1	3	90	33	122	5.82e-36	118
MS.gene003613.t1	MTR_8g461420	66.667	90	30	0	1	90	1	90	5.90e-36	117
MS.gene003613.t1	MTR_3g084190	65.556	90	31	0	1	90	1	90	8.29e-36	117
MS.gene003613.t1	MTR_3g084230	66.667	90	30	0	1	90	1	90	2.27e-35	115
MS.gene003613.t1	MTR_4g072610	66.667	90	24	1	1	90	1	84	2.83e-35	115
MS.gene003613.t1	MTR_4g072540	67.778	90	25	1	1	90	1	86	4.96e-35	115
MS.gene003613.t1	MTR_3g084160	64.444	90	32	0	1	90	1	90	9.66e-35	114
MS.gene003613.t1	MTR_4g072590	68.889	90	23	1	1	90	1	85	2.49e-34	113
MS.gene003613.t1	MTR_4g072820	67.778	90	22	2	1	89	1	84	2.77e-34	113
MS.gene003613.t1	MTR_4g072720	66.667	90	26	1	1	90	1	86	7.86e-34	112
MS.gene003613.t1	MTR_4g072670	67.778	90	25	1	1	90	1	86	8.58e-34	112
MS.gene003613.t1	MTR_4g072650	64.444	90	26	1	1	90	1	84	2.20e-33	110
MS.gene003613.t1	MTR_4g072380	63.736	91	27	2	1	90	1	86	3.04e-33	110
MS.gene003613.t1	MTR_3g110045	67.045	88	29	0	3	90	62	149	3.09e-33	112
MS.gene003613.t1	MTR_4g072510	64.444	90	28	1	1	90	1	86	2.40e-32	108
MS.gene003613.t1	MTR_5g008350	64.557	79	23	1	1	79	1	74	1.62e-31	105
MS.gene003613.t1	MTR_4g072690	67.778	90	24	1	1	90	1	85	2.11e-31	105
MS.gene003613.t1	MTR_4g072450	67.778	90	24	1	1	90	1	85	8.41e-31	104
MS.gene003613.t1	MTR_4g072750	72.603	73	18	1	1	71	1	73	9.08e-31	104
MS.gene003613.t1	MTR_4g072290	59.783	92	22	2	1	91	1	78	1.03e-30	103
MS.gene003613.t1	MTR_4g072910	58.621	87	33	2	4	90	17	100	9.73e-30	102
MS.gene003613.t1	MTR_4g072980	54.444	90	35	2	1	89	8	92	1.78e-29	101
MS.gene003613.t1	MTR_4g072770	71.212	66	19	0	25	90	15	80	3.64e-29	100
MS.gene003613.t1	MTR_3g117640	69.565	69	20	1	24	91	33	101	5.29e-29	100
MS.gene003613.t1	MTR_4g072560	51.546	97	39	2	1	89	1	97	6.31e-29	100
MS.gene003613.t1	MTR_3g084200	65.278	72	25	0	1	72	1	72	1.15e-28	99.4
MS.gene003613.t1	MTR_3g110035	63.636	66	24	0	26	91	72	137	1.36e-25	92.8
MS.gene003613.t1	MTR_4g072280	58.667	75	30	1	1	74	1	75	1.01e-24	88.6
MS.gene003613.t1	MTR_6g077850	53.731	67	31	0	24	90	33	99	8.76e-24	87.0
MS.gene003613.t1	MTR_3g117610	56.716	67	28	1	23	89	43	108	6.92e-23	85.1
MS.gene003613.t1	MTR_4g072190	49.412	85	41	2	5	89	17	99	8.69e-23	84.3
MS.gene003613.t1	MTR_3g113310	53.731	67	30	1	23	89	40	105	9.47e-23	84.7
MS.gene003613.t1	MTR_4g072930	50.617	81	35	2	15	90	30	110	9.41e-21	79.7
MS.gene003613.t1	MTR_8g076040	54.545	66	29	1	24	89	40	104	1.57e-20	79.0
MS.gene003613.t1	MTR_5g021820	53.030	66	30	1	24	89	39	103	6.83e-20	77.4
MS.gene003613.t1	MTR_8g461400	45.055	91	24	1	1	91	1	65	3.25e-19	74.3
MS.gene003613.t1	MTR_2g043960	47.436	78	40	1	15	92	66	142	2.66e-18	74.7
MS.gene003613.t1	MTR_4g124750	42.045	88	48	2	4	89	46	132	4.22e-18	73.9
MS.gene003613.t1	MTR_4g072840	46.667	90	16	3	1	89	1	59	2.36e-17	69.7
MS.gene003613.t1	MTR_7g118010	47.541	61	31	1	30	90	30	89	9.30e-16	66.6
MS.gene003613.t1	MTR_3g092220	40.000	85	45	3	1	83	12	92	1.39e-15	66.6
MS.gene003613.t1	MTR_8g461210	41.860	86	49	1	4	89	14	98	2.46e-15	65.9
MS.gene003613.t1	MTR_1g094750	42.353	85	44	3	5	85	26	109	4.46e-15	65.5
MS.gene003613.t1	MTR_1g024085	45.783	83	41	2	4	83	13	94	8.44e-15	65.5
MS.gene003613.t1	MTR_4g005310	45.946	74	38	2	21	92	58	131	2.00e-14	64.7
MS.gene003613.t1	MTR_8g026730	45.588	68	34	2	25	90	27	93	2.36e-14	63.2
MS.gene003613.t1	MTR_1g009150	50.000	68	33	1	18	85	64	130	5.64e-14	63.9
MS.gene003613.t1	MTR_1g063310	39.326	89	49	3	5	90	6	92	1.12e-13	61.2
MS.gene003613.t1	MTR_0388s0020	38.824	85	48	2	8	89	58	141	1.43e-13	62.4
MS.gene003613.t1	MTR_4g072160	44.444	81	39	3	6	85	21	96	2.85e-13	61.2
MS.gene003613.t1	MTR_4g005320	44.118	68	37	1	25	92	70	136	8.34e-13	60.5
MS.gene003613.t1	MTR_1g061570	45.588	68	36	1	24	91	18	84	8.50e-13	59.7
MS.gene003613.t1	MTR_3g109160	40.741	81	47	1	12	92	56	135	9.31e-13	60.5
MS.gene003613.t1	MTR_1g063950	40.278	72	42	1	17	88	40	110	1.17e-12	59.3
MS.gene003613.t1	MTR_1g059770	41.176	68	36	2	28	92	52	118	2.12e-12	58.9
MS.gene003613.t1	MTR_7g104940	37.333	75	42	2	15	89	44	113	2.63e-12	58.5
MS.gene003613.t1	MTR_8g101520	39.773	88	48	2	7	90	28	114	2.92e-12	58.9
MS.gene003613.t1	MTR_2g095430	40.000	80	40	3	5	77	22	100	3.47e-12	58.2
MS.gene003613.t1	MTR_7g104950	34.211	76	45	2	14	89	43	113	4.12e-12	58.2
MS.gene003613.t1	MTR_1g063290	43.750	64	33	2	24	85	38	100	5.17e-12	57.4
MS.gene003613.t1	MTR_3g097120	41.892	74	34	2	20	85	4	76	6.28e-12	57.0
MS.gene003613.t1	MTR_7g101740	45.312	64	34	1	24	87	39	101	6.59e-12	57.0
MS.gene003613.t1	MTR_1g063300	43.750	64	33	2	24	85	38	100	7.97e-12	56.6
MS.gene003613.t1	MTR_4g025830	40.909	66	35	2	25	87	79	143	1.10e-11	57.8
MS.gene003613.t1	MTR_7g101890	37.975	79	46	2	9	85	36	113	1.27e-11	56.6
MS.gene003613.t1	MTR_1g063330	42.424	66	35	2	24	87	31	95	1.68e-11	55.8
MS.gene003613.t1	MTR_4g057810	33.333	84	53	2	4	85	17	99	3.31e-11	55.5
MS.gene003613.t1	MTR_1g063340	42.254	71	35	3	24	92	31	97	5.67e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003613.t1	AT4G34770	62.222	90	32	1	4	91	14	103	6.87e-34	112
MS.gene003613.t1	AT4G34800	60.000	85	27	2	1	82	1	81	1.28e-30	103
MS.gene003613.t1	AT5G18060	53.846	91	40	2	1	90	1	90	2.31e-30	103
MS.gene003613.t1	AT5G18020	54.545	88	38	2	1	87	1	87	4.34e-30	102
MS.gene003613.t1	AT4G38840	54.545	99	36	3	1	90	1	99	7.16e-30	102
MS.gene003613.t1	AT5G18080	53.333	90	40	2	1	89	1	89	1.98e-29	100
MS.gene003613.t1	AT2G21200	55.952	84	35	2	8	89	3	86	2.27e-29	100
MS.gene003613.t1	AT2G21210	50.526	95	42	2	1	90	1	95	3.12e-29	100
MS.gene003613.t1	AT5G18050	58.974	78	30	2	13	89	13	89	5.72e-29	99.8
MS.gene003613.t1	AT2G21210	50.526	95	42	2	1	90	68	162	1.27e-28	101
MS.gene003613.t1	AT5G18030	54.118	85	36	2	8	89	3	87	1.34e-28	99.0
MS.gene003613.t1	AT4G38825	58.667	75	30	1	17	90	15	89	2.46e-28	98.2
MS.gene003613.t1	AT5G18010	51.111	90	42	2	1	89	1	89	1.88e-27	95.9
MS.gene003613.t1	AT4G38850	55.556	90	33	3	1	87	1	86	1.01e-26	94.0
MS.gene003613.t1	AT3G03840	58.904	73	28	1	21	91	23	95	1.66e-26	94.0
MS.gene003613.t1	AT4G34810	69.355	62	15	1	25	82	48	109	2.66e-26	94.0
MS.gene003613.t1	AT3G03820	51.685	89	37	2	6	91	11	96	3.62e-26	92.8
MS.gene003613.t1	AT3G03850	65.672	67	21	1	27	91	27	93	3.80e-26	92.8
MS.gene003613.t1	AT4G13790	44.944	89	47	1	1	87	1	89	1.20e-24	89.0
MS.gene003613.t1	AT3G03830	57.746	71	27	1	20	87	19	89	2.52e-24	88.2
MS.gene003613.t1	AT4G34780	60.000	70	25	1	23	89	26	95	6.68e-24	87.4
MS.gene003613.t1	AT4G34790	61.538	65	23	1	25	87	39	103	1.25e-22	84.3
MS.gene003613.t1	AT1G75580	50.000	80	39	1	10	89	29	107	6.54e-22	82.4
MS.gene003613.t1	AT4G34760	55.224	67	29	1	23	89	41	106	8.94e-22	82.0
MS.gene003613.t1	AT4G38860	52.941	68	32	0	23	90	38	105	2.42e-21	80.9
MS.gene003613.t1	AT2G21220	53.731	67	30	1	23	89	38	103	3.52e-21	80.5
MS.gene003613.t1	AT1G19830	55.405	74	31	2	17	89	40	112	6.69e-20	77.8
MS.gene003613.t1	AT2G16580	52.239	67	31	1	23	89	42	107	2.93e-19	75.9
MS.gene003613.t1	AT3G43120	41.111	90	52	1	3	92	57	145	2.99e-19	77.0
MS.gene003613.t1	AT4G36110	51.562	64	30	1	24	87	39	101	1.57e-17	71.2
MS.gene003613.t1	AT5G20810	51.515	66	31	1	24	89	78	142	1.77e-17	72.8
MS.gene003613.t1	AT5G20810	47.945	73	37	1	17	89	71	142	2.05e-17	73.2
MS.gene003613.t1	AT2G18010	51.562	64	30	1	24	87	47	109	2.67e-17	70.9
MS.gene003613.t1	AT2G46690	37.778	90	52	2	6	92	5	93	7.84e-17	70.1
MS.gene003613.t1	AT5G66260	43.820	89	46	2	5	90	11	98	2.43e-16	68.2
MS.gene003613.t1	AT3G20220	41.573	89	44	3	4	85	20	107	3.40e-16	68.2
MS.gene003613.t1	AT3G12830	40.230	87	50	2	4	90	30	114	1.08e-14	64.7
MS.gene003613.t1	AT3G51200	50.877	57	27	1	26	82	41	96	1.52e-14	63.5
MS.gene003613.t1	AT1G75590	42.353	85	43	2	4	83	16	99	5.54e-14	63.5
MS.gene003613.t1	AT2G37030	46.154	65	34	1	24	88	48	111	7.21e-14	62.4
MS.gene003613.t1	AT3G61900	37.234	94	49	3	6	90	5	97	9.16e-14	62.4
MS.gene003613.t1	AT4G00880	47.826	69	33	2	24	90	27	94	9.96e-14	62.0
MS.gene003613.t1	AT3G09870	50.000	70	32	2	18	85	38	106	2.22e-13	60.8
MS.gene003613.t1	AT5G10990	42.857	84	43	3	4	83	16	98	3.57e-13	61.2
MS.gene003613.t1	AT4G34750	43.750	64	35	1	24	87	36	98	4.22e-13	61.2
MS.gene003613.t1	AT4G34750	43.750	64	35	1	24	87	36	98	4.22e-13	61.2
MS.gene003613.t1	AT1G19840	44.048	84	42	2	4	83	16	98	6.03e-13	60.8
MS.gene003613.t1	AT3G03847	38.272	81	48	2	3	82	48	127	2.75e-12	58.5
MS.gene003613.t1	AT4G31320	43.939	66	36	1	20	85	75	139	7.57e-12	58.5
MS.gene003613.t1	AT1G76190	48.333	60	29	2	26	85	22	79	8.28e-12	57.0
MS.gene003613.t1	AT5G53590	38.889	72	38	2	24	90	45	115	1.12e-11	57.4
MS.gene003613.t1	AT2G24400	49.180	61	30	1	25	85	64	123	3.06e-11	56.6
MS.gene003613.t1	AT2G45210	38.028	71	40	2	20	87	74	143	3.39e-11	56.2
MS.gene003613.t1	AT3G60690	42.857	70	36	2	21	87	84	152	3.50e-11	56.6
MS.gene003613.t1	AT1G20470	43.056	72	39	2	21	92	19	88	4.54e-11	55.8
MS.gene003613.t1	AT1G56150	42.424	66	37	1	25	90	38	102	8.98e-11	54.3

Find 30 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCGTTTACAAACTATTCTA+AGG	0.281110	4.1:-31001539	MS.gene003613:CDS
CACATAACTTCTTGCTTGAA+TGG	0.304861	4.1:-31001297	MS.gene003613:CDS
TGGCTGGTTCAAGTATGATA+TGG	0.304862	4.1:+31001416	None:intergenic
AGTCAAGCCGAAGAAGAGTT+TGG	0.400452	4.1:-31001375	MS.gene003613:CDS
TTGAACCAGCCATCGTTTCA+AGG	0.412783	4.1:-31001405	MS.gene003613:CDS
CCCTTAGAATAGTTTGTAAA+CGG	0.415563	4.1:+31001538	None:intergenic
ATCATATCCAAACTCTTCTT+CGG	0.425222	4.1:+31001368	None:intergenic
GGCTGGTTCAAGTATGATAT+GGG	0.431694	4.1:+31001417	None:intergenic
TATGTGTTGGAAGGCTTCTT+CGG	0.441042	4.1:+31001314	None:intergenic
ACATAACTTCTTGCTTGAAT+GGG	0.448638	4.1:-31001296	MS.gene003613:CDS
AAAATCTGTAGAAGTGAGAA+AGG	0.471464	4.1:-31001487	MS.gene003613:CDS
AAATCTGTAGAAGTGAGAAA+GGG	0.501254	4.1:-31001486	MS.gene003613:CDS
ATGAAGGAGAGGAGCAGAAG+AGG	0.503502	4.1:-31001449	MS.gene003613:CDS
GGCTTCTTCGGTGCAAGGAA+TGG	0.529253	4.1:+31001326	None:intergenic
CCGTTTACAAACTATTCTAA+GGG	0.531520	4.1:-31001538	MS.gene003613:CDS
GGGTATGTTGCAGTGTATGA+AGG	0.540888	4.1:-31001465	MS.gene003613:CDS
TGGAAGGCTTCTTCGGTGCA+AGG	0.543329	4.1:+31001321	None:intergenic
AGGAATGGTGAGGCCACCCA+TGG	0.554354	4.1:+31001341	None:intergenic
TCAAGCAAGAAGTTATGTGT+TGG	0.558158	4.1:+31001301	None:intergenic
CTCAGTAAGCCTTGAAACGA+TGG	0.561145	4.1:+31001396	None:intergenic
GTTTGGATATGATCATCCCA+TGG	0.570301	4.1:-31001358	MS.gene003613:CDS
GCAAGAAGTTATGTGTTGGA+AGG	0.573373	4.1:+31001305	None:intergenic
GTAAGCCTTGAAACGATGGC+TGG	0.590778	4.1:+31001400	None:intergenic
GGATATGATCATCCCATGGG+TGG	0.600402	4.1:-31001354	MS.gene003613:CDS
TGTTGCAGTGTATGAAGGAG+AGG	0.616483	4.1:-31001460	MS.gene003613:CDS
GGAATGGTGAGGCCACCCAT+GGG	0.636587	4.1:+31001342	None:intergenic
TTTGGATATGATCATCCCAT+GGG	0.641263	4.1:-31001357	MS.gene003613:CDS
AATCTGTAGAAGTGAGAAAG+GGG	0.642438	4.1:-31001485	MS.gene003613:CDS
CTTCGGTGCAAGGAATGGTG+AGG	0.665194	4.1:+31001331	None:intergenic
GCTGGTTCAAGTATGATATG+GGG	0.687425	4.1:+31001418	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAAATCTGTAGAAGTGAGAA+AGG	-	chr4.1:31001349-31001368	MS.gene003613:CDS	30.0%
	AAATCTGTAGAAGTGAGAAA+GGG	-	chr4.1:31001350-31001369	MS.gene003613:CDS	30.0%
	ACATAACTTCTTGCTTGAAT+GGG	-	chr4.1:31001540-31001559	MS.gene003613:CDS	30.0%
	ATCATATCCAAACTCTTCTT+CGG	+	chr4.1:31001471-31001490	None:intergenic	30.0%
	CCGTTTACAAACTATTCTAA+GGG	-	chr4.1:31001298-31001317	MS.gene003613:CDS	30.0%
	TCCGTTTACAAACTATTCTA+AGG	-	chr4.1:31001297-31001316	MS.gene003613:CDS	30.0%
!	CCCTTAGAATAGTTTGTAAA+CGG	+	chr4.1:31001301-31001320	None:intergenic	30.0%
	AATCTGTAGAAGTGAGAAAG+GGG	-	chr4.1:31001351-31001370	MS.gene003613:CDS	35.0%
	CACATAACTTCTTGCTTGAA+TGG	-	chr4.1:31001539-31001558	MS.gene003613:CDS	35.0%
	TCAAGCAAGAAGTTATGTGT+TGG	+	chr4.1:31001538-31001557	None:intergenic	35.0%
	TTTGGATATGATCATCCCAT+GGG	-	chr4.1:31001479-31001498	MS.gene003613:CDS	35.0%
	GCAAGAAGTTATGTGTTGGA+AGG	+	chr4.1:31001534-31001553	None:intergenic	40.0%
	GTTTGGATATGATCATCCCA+TGG	-	chr4.1:31001478-31001497	MS.gene003613:CDS	40.0%
	TATGTGTTGGAAGGCTTCTT+CGG	+	chr4.1:31001525-31001544	None:intergenic	40.0%
!	GCTGGTTCAAGTATGATATG+GGG	+	chr4.1:31001421-31001440	None:intergenic	40.0%
!	GGCTGGTTCAAGTATGATAT+GGG	+	chr4.1:31001422-31001441	None:intergenic	40.0%
!	TGGCTGGTTCAAGTATGATA+TGG	+	chr4.1:31001423-31001442	None:intergenic	40.0%
	AGTCAAGCCGAAGAAGAGTT+TGG	-	chr4.1:31001461-31001480	MS.gene003613:CDS	45.0%
	CTCAGTAAGCCTTGAAACGA+TGG	+	chr4.1:31001443-31001462	None:intergenic	45.0%
	GGGTATGTTGCAGTGTATGA+AGG	-	chr4.1:31001371-31001390	MS.gene003613:CDS	45.0%
	TGTTGCAGTGTATGAAGGAG+AGG	-	chr4.1:31001376-31001395	MS.gene003613:CDS	45.0%
	TTGAACCAGCCATCGTTTCA+AGG	-	chr4.1:31001431-31001450	MS.gene003613:CDS	45.0%
	ATGAAGGAGAGGAGCAGAAG+AGG	-	chr4.1:31001387-31001406	MS.gene003613:CDS	50.0%
	GGATATGATCATCCCATGGG+TGG	-	chr4.1:31001482-31001501	MS.gene003613:CDS	50.0%
	GTAAGCCTTGAAACGATGGC+TGG	+	chr4.1:31001439-31001458	None:intergenic	50.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	+	chr4.1:31001508-31001527	None:intergenic	55.0%
!	GGCTTCTTCGGTGCAAGGAA+TGG	+	chr4.1:31001513-31001532	None:intergenic	55.0%
!	TGGAAGGCTTCTTCGGTGCA+AGG	+	chr4.1:31001518-31001537	None:intergenic	55.0%
	AGGAATGGTGAGGCCACCCA+TGG	+	chr4.1:31001498-31001517	None:intergenic	60.0%
	GGAATGGTGAGGCCACCCAT+GGG	+	chr4.1:31001497-31001516	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	31001290	31001568	31001290	ID=MS.gene003613
chr4.1	mRNA	31001290	31001568	31001290	ID=MS.gene003613.t1;Parent=MS.gene003613
chr4.1	exon	31001290	31001568	31001290	ID=MS.gene003613.t1.exon1;Parent=MS.gene003613.t1
chr4.1	CDS	31001290	31001568	31001290	ID=cds.MS.gene003613.t1;Parent=MS.gene003613.t1

Gene Sequence	>MS.gene003613 ATGGGTTTCCGTTTACAAACTATTCTAAGGGCATCAGTTACTTCTAGACAAGCATCATCAAAATCTGTAGAAGTGAGAAAGGGGTATGTTGCAGTGTATGAAGGAGAGGAGCAGAAGAGGTTTGTGATCCCCATATCATACTTGAACCAGCCATCGTTTCAAGGCTTACTGAGTCAAGCCGAAGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGAAGCCTTCCAACACATAACTTCTTGCTTGAATGGGCAATAA
Protein sequence	>MS.gene003613.t1 MGFRLQTILRASVTSRQASSKSVEVRKGYVAVYEGEEQKRFVIPISYLNQPSFQGLLSQAEEEFGYDHPMGGLTIPCTEEAFQHITSCLNGQ