AlfalfaGEDB | MS.gene003622

M. sativa cultivar XinJiangDaYe / MS.gene003622

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003622.t1	XP_003607107.1	96.8	93	3	0	1	93	1	93	9.10E-45	189.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003622.t1	P33083	76.9	91	20	1	1	91	1	90	1.3e-34	146.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003622.t1	G7JL29	96.8	93	3	0	1	93	1	93	6.6e-45	189.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene79890	MS.gene003622	PPI
MS.gene003615	MS.gene003622	PPI
MS.gene79887	MS.gene003622	PPI
MS.gene062973	MS.gene003622	PPI
MS.gene77526	MS.gene003622	PPI
MS.gene047517	MS.gene003622	PPI
MS.gene045360	MS.gene003622	PPI
MS.gene014669	MS.gene003622	PPI
MS.gene045367	MS.gene003622	PPI
MS.gene057801	MS.gene003622	PPI
MS.gene68162	MS.gene003622	PPI
MS.gene014223	MS.gene003622	PPI
MS.gene50687	MS.gene003622	PPI
MS.gene40327	MS.gene003622	PPI
MS.gene75677	MS.gene003622	PPI
MS.gene057795	MS.gene003622	PPI
MS.gene68165	MS.gene003622	PPI
MS.gene75678	MS.gene003622	PPI
MS.gene002380	MS.gene003622	PPI
MS.gene045361	MS.gene003622	PPI
MS.gene50675	MS.gene003622	PPI
MS.gene003591	MS.gene003622	PPI
MS.gene50684	MS.gene003622	PPI
MS.gene062979	MS.gene003622	PPI
MS.gene003590	MS.gene003622	PPI
MS.gene062943	MS.gene003622	PPI
MS.gene75679	MS.gene003622	PPI
MS.gene014668	MS.gene003622	PPI
MS.gene003608	MS.gene003622	PPI
MS.gene79888	MS.gene003622	PPI
MS.gene40326	MS.gene003622	PPI
MS.gene75672	MS.gene003622	PPI
MS.gene77527	MS.gene003622	PPI
MS.gene50654	MS.gene003622	PPI
MS.gene50676	MS.gene003622	PPI
MS.gene003614	MS.gene003622	PPI
MS.gene057818	MS.gene003622	PPI
MS.gene50652	MS.gene003622	PPI
MS.gene50766	MS.gene003622	PPI
MS.gene003594	MS.gene003622	PPI
MS.gene79889	MS.gene003622	PPI
MS.gene50677	MS.gene003622	PPI
MS.gene014671	MS.gene003622	PPI
MS.gene003625	MS.gene003622	PPI
MS.gene68759	MS.gene003622	PPI
MS.gene01764	MS.gene003622	PPI
MS.gene50764	MS.gene003622	PPI
MS.gene50763	MS.gene003622	PPI
MS.gene014670	MS.gene003622	PPI
MS.gene75315	MS.gene003622	PPI
MS.gene40325	MS.gene003622	PPI
MS.gene79885	MS.gene003622	PPI
MS.gene01358	MS.gene003622	PPI
MS.gene50659	MS.gene003622	PPI
MS.gene75675	MS.gene003622	PPI
MS.gene003583	MS.gene003622	PPI
MS.gene68163	MS.gene003622	PPI
MS.gene057790	MS.gene003622	PPI
MS.gene062974	MS.gene003622	PPI
MS.gene062952	MS.gene003622	PPI
MS.gene045363	MS.gene003622	PPI
MS.gene003624	MS.gene003622	PPI
MS.gene79886	MS.gene003622	PPI
MS.gene031199	MS.gene003622	PPI
MS.gene75314	MS.gene003622	PPI
MS.gene057808	MS.gene003622	PPI
MS.gene057797	MS.gene003622	PPI
MS.gene23370	MS.gene003622	PPI
MS.gene77529	MS.gene003622	PPI
MS.gene68761	MS.gene003622	PPI
MS.gene014667	MS.gene003622	PPI
MS.gene68760	MS.gene003622	PPI
MS.gene003596	MS.gene003622	PPI
MS.gene75676	MS.gene003622	PPI
MS.gene50665	MS.gene003622	PPI
MS.gene003586	MS.gene003622	PPI
MS.gene057778	MS.gene003622	PPI
MS.gene062988	MS.gene003622	PPI
MS.gene75673	MS.gene003622	PPI
MS.gene045366	MS.gene003622	PPI
MS.gene062963	MS.gene003622	PPI
MS.gene77528	MS.gene003622	PPI
MS.gene68164	MS.gene003622	PPI
MS.gene031198	MS.gene003622	PPI
MS.gene75674	MS.gene003622	PPI
MS.gene031200	MS.gene003622	PPI
MS.gene045365	MS.gene003622	PPI
MS.gene50765	MS.gene003622	PPI
MS.gene045364	MS.gene003622	PPI
MS.gene003602	MS.gene003622	PPI
MS.gene23372	MS.gene003622	PPI
MS.gene75316	MS.gene003622	PPI
MS.gene003627	MS.gene003622	PPI
MS.gene003577	MS.gene003622	PPI
MS.gene77524	MS.gene003622	PPI
MS.gene062984	MS.gene003622	PPI
MS.gene014222	MS.gene003622	PPI
MS.gene23371	MS.gene003622	PPI
MS.gene031201	MS.gene003622	PPI
MS.gene062951	MS.gene003622	PPI
MS.gene045362	MS.gene003622	PPI
MS.gene77523	MS.gene003622	PPI
MS.gene003587	MS.gene003622	PPI
MS.gene045368	MS.gene003622	PPI
MS.gene063112	MS.gene003622	PPI
MS.gene79891	MS.gene003622	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003622.t1	MTR_4g072310	96.774	93	3	0	1	93	1	93	3.23e-65	191
MS.gene003622.t1	MTR_4g072880	83.871	93	15	0	1	93	1	93	2.60e-57	171
MS.gene003622.t1	MTR_4g072270	86.022	93	13	0	1	93	1	93	3.95e-57	171
MS.gene003622.t1	MTR_4g072230	84.946	93	12	1	1	93	1	91	4.17e-55	166
MS.gene003622.t1	MTR_4g072250	82.796	93	15	1	1	93	1	92	2.55e-53	161
MS.gene003622.t1	MTR_4g072860	79.570	93	19	0	1	93	1	93	1.57e-52	159
MS.gene003622.t1	MTR_4g072500	74.194	93	23	1	1	93	1	92	2.36e-49	151
MS.gene003622.t1	MTR_3g084240	72.043	93	25	1	1	93	1	92	1.70e-47	146
MS.gene003622.t1	MTR_4g072640	74.725	91	22	1	1	91	1	90	1.72e-47	146
MS.gene003622.t1	MTR_4g072240	70.330	91	27	0	1	91	1	91	2.18e-47	146
MS.gene003622.t1	MTR_4g072530	73.626	91	23	1	1	91	1	90	2.46e-47	146
MS.gene003622.t1	MTR_4g072480	72.043	93	25	1	1	93	1	92	3.97e-47	145
MS.gene003622.t1	MTR_3g084170	72.043	93	25	1	1	93	1	92	7.09e-47	145
MS.gene003622.t1	MTR_4g072620	72.043	93	25	1	1	93	1	92	7.41e-47	145
MS.gene003622.t1	MTR_4g072570	73.118	93	24	1	1	93	1	92	9.23e-47	144
MS.gene003622.t1	MTR_3g084150	69.892	93	27	1	1	93	1	92	1.74e-46	144
MS.gene003622.t1	MTR_4g072680	72.043	93	25	1	1	93	1	92	1.78e-46	144
MS.gene003622.t1	MTR_4g072460	72.043	93	25	1	1	93	1	92	3.26e-46	143
MS.gene003622.t1	MTR_8g461410	67.742	93	29	1	1	93	1	92	8.95e-46	142
MS.gene003622.t1	MTR_4g072220	66.667	93	31	0	1	93	1	93	1.28e-45	142
MS.gene003622.t1	MTR_3g084180	68.817	93	28	1	1	93	1	92	1.83e-45	141
MS.gene003622.t1	MTR_4g072870	68.132	91	29	0	1	91	1	91	2.16e-45	141
MS.gene003622.t1	MTR_3g117630	71.111	90	26	0	4	93	3	92	2.62e-45	141
MS.gene003622.t1	MTR_4g050700	67.742	93	30	0	1	93	1	93	4.10e-45	140
MS.gene003622.t1	MTR_2g012410	67.742	93	30	0	1	93	1	93	4.10e-45	140
MS.gene003622.t1	MTR_4g072370	72.527	91	22	1	1	91	1	88	4.52e-45	140
MS.gene003622.t1	MTR_4g072730	69.565	92	27	1	1	92	1	91	5.35e-45	140
MS.gene003622.t1	MTR_4g072850	73.404	94	24	1	1	93	1	94	8.91e-45	139
MS.gene003622.t1	MTR_4g072300	65.934	91	31	0	1	91	1	91	1.00e-44	139
MS.gene003622.t1	MTR_3g084220	68.817	93	28	1	1	93	1	92	1.47e-44	139
MS.gene003622.t1	MTR_3g110038	68.817	93	28	1	1	93	1	92	1.57e-44	139
MS.gene003622.t1	MTR_3g110032	66.667	93	31	0	1	93	1	93	2.92e-44	138
MS.gene003622.t1	MTR_4g072890	65.934	91	31	0	1	91	1	91	2.73e-43	135
MS.gene003622.t1	MTR_4g072260	64.516	93	33	0	1	93	1	93	2.83e-43	135
MS.gene003622.t1	MTR_3g084250	66.667	93	30	1	1	93	1	92	1.35e-42	134
MS.gene003622.t1	MTR_5g008360	74.684	79	20	0	15	93	5	83	2.36e-42	133
MS.gene003622.t1	MTR_3g084260	64.516	93	33	0	1	93	1	93	5.98e-42	132
MS.gene003622.t1	MTR_4g072330	67.033	91	27	1	1	91	1	88	6.52e-42	132
MS.gene003622.t1	MTR_4g072580	69.231	91	22	1	1	91	1	85	1.14e-41	131
MS.gene003622.t1	MTR_3g110042	67.778	90	28	1	1	90	1	89	1.96e-41	131
MS.gene003622.t1	MTR_4g072740	69.231	91	22	1	1	91	1	85	1.99e-41	131
MS.gene003622.t1	MTR_4g072290	68.817	93	15	1	1	93	1	79	2.03e-41	130
MS.gene003622.t1	MTR_4g072830	68.889	90	25	1	1	90	1	87	6.38e-41	130
MS.gene003622.t1	MTR_4g072490	67.033	91	24	1	1	91	1	85	1.19e-40	129
MS.gene003622.t1	MTR_4g072660	64.516	93	27	1	1	93	1	87	1.64e-40	129
MS.gene003622.t1	MTR_4g072940	68.478	92	28	1	3	93	33	124	3.76e-40	129
MS.gene003622.t1	MTR_5g008370	85.507	69	10	0	24	92	23	91	6.62e-40	129
MS.gene003622.t1	MTR_4g072470	68.132	91	23	1	1	91	1	85	1.56e-39	126
MS.gene003622.t1	MTR_4g072610	68.132	91	22	1	1	91	1	84	7.56e-39	124
MS.gene003622.t1	MTR_3g084210	67.742	93	29	1	1	93	1	92	4.99e-38	122
MS.gene003622.t1	MTR_3g084190	67.742	93	29	1	1	93	1	92	1.34e-37	121
MS.gene003622.t1	MTR_4g072630	62.637	91	29	1	1	91	1	86	1.72e-37	121
MS.gene003622.t1	MTR_4g072820	66.304	92	23	2	1	91	1	85	2.34e-37	120
MS.gene003622.t1	MTR_4g072600	63.736	91	27	1	1	91	1	85	4.08e-37	120
MS.gene003622.t1	MTR_4g072465	62.637	91	29	1	1	91	1	86	5.95e-37	119
MS.gene003622.t1	MTR_8g461420	68.132	91	28	1	1	91	1	90	7.82e-37	119
MS.gene003622.t1	MTR_4g072550	68.750	80	24	1	15	93	24	103	1.17e-36	119
MS.gene003622.t1	MTR_4g072540	64.835	91	27	1	1	91	1	86	1.43e-36	119
MS.gene003622.t1	MTR_4g072650	63.736	91	26	1	1	91	1	84	2.05e-36	118
MS.gene003622.t1	MTR_3g084230	68.132	91	28	1	1	91	1	90	2.10e-36	118
MS.gene003622.t1	MTR_3g084160	64.516	93	32	1	1	93	1	92	8.91e-36	117
MS.gene003622.t1	MTR_4g072380	65.217	92	25	2	1	91	1	86	9.70e-36	117
MS.gene003622.t1	MTR_4g072670	64.835	91	27	1	1	91	1	86	1.14e-35	116
MS.gene003622.t1	MTR_4g072720	63.736	91	28	1	1	91	1	86	1.23e-35	116
MS.gene003622.t1	MTR_3g110045	71.765	85	24	0	9	93	67	151	1.39e-35	118
MS.gene003622.t1	MTR_4g072590	77.941	68	15	0	24	91	18	85	1.93e-35	115
MS.gene003622.t1	MTR_4g072510	61.538	91	30	1	1	91	1	86	1.56e-33	111
MS.gene003622.t1	MTR_4g072910	57.447	94	34	2	4	91	7	100	1.08e-32	109
MS.gene003622.t1	MTR_4g072980	57.292	96	37	3	1	93	1	95	2.23e-32	108
MS.gene003622.t1	MTR_4g072560	59.524	84	26	2	9	91	22	98	5.27e-32	107
MS.gene003622.t1	MTR_5g008350	62.500	80	24	1	1	80	1	74	2.49e-31	105
MS.gene003622.t1	MTR_3g084200	65.753	73	24	1	1	73	1	72	3.43e-31	105
MS.gene003622.t1	MTR_4g072690	70.588	68	20	0	24	91	18	85	4.43e-31	105
MS.gene003622.t1	MTR_4g072450	70.588	68	20	0	24	91	18	85	9.97e-31	103
MS.gene003622.t1	MTR_4g072770	69.697	66	20	0	26	91	15	80	1.56e-30	103
MS.gene003622.t1	MTR_3g117640	65.217	69	23	1	25	92	33	101	2.66e-30	103
MS.gene003622.t1	MTR_3g110035	60.256	78	30	1	16	93	62	138	2.07e-29	102
MS.gene003622.t1	MTR_4g072750	64.000	75	24	2	1	73	1	74	1.40e-28	98.6
MS.gene003622.t1	MTR_4g072280	56.000	75	33	0	1	75	1	75	3.11e-27	95.1
MS.gene003622.t1	MTR_3g113310	59.701	67	26	1	24	90	40	105	2.33e-26	93.6
MS.gene003622.t1	MTR_6g077850	47.727	88	45	1	4	91	13	99	6.94e-26	92.4
MS.gene003622.t1	MTR_3g117610	63.077	65	23	1	24	88	43	106	1.63e-25	91.7
MS.gene003622.t1	MTR_4g072190	61.194	67	25	1	24	90	34	99	3.39e-25	90.5
MS.gene003622.t1	MTR_8g461400	49.462	93	20	2	1	93	1	66	2.58e-24	87.4
MS.gene003622.t1	MTR_4g072930	48.235	85	40	1	11	91	26	110	2.43e-22	83.6
MS.gene003622.t1	MTR_5g021820	56.061	66	28	1	25	90	39	103	3.77e-22	83.2
MS.gene003622.t1	MTR_8g076040	57.812	64	26	1	25	88	40	102	6.12e-22	82.4
MS.gene003622.t1	MTR_4g072840	47.826	92	15	3	1	91	1	60	1.00e-18	73.2
MS.gene003622.t1	MTR_1g024085	50.000	70	31	2	15	84	29	94	1.42e-16	70.1
MS.gene003622.t1	MTR_2g043960	50.000	62	30	1	25	86	75	135	2.75e-16	69.7
MS.gene003622.t1	MTR_4g005310	47.887	71	33	2	17	86	56	123	2.79e-16	69.3
MS.gene003622.t1	MTR_4g124750	48.438	64	32	1	25	88	68	130	3.90e-16	68.9
MS.gene003622.t1	MTR_7g118010	40.741	81	45	2	13	91	10	89	1.15e-15	66.6
MS.gene003622.t1	MTR_4g025830	42.647	68	35	2	26	90	79	145	5.24e-15	66.2
MS.gene003622.t1	MTR_1g061570	39.773	88	49	2	5	92	1	84	5.82e-15	65.1
MS.gene003622.t1	MTR_3g092220	41.026	78	41	3	9	84	18	92	7.83e-15	64.7
MS.gene003622.t1	MTR_0388s0020	37.209	86	49	3	8	90	58	141	1.13e-14	65.1
MS.gene003622.t1	MTR_1g094750	46.774	62	32	1	25	86	49	109	1.38e-14	63.9
MS.gene003622.t1	MTR_1g063950	46.377	69	36	1	15	83	37	104	1.60e-14	63.9
MS.gene003622.t1	MTR_8g026730	42.466	73	39	2	21	91	22	93	2.66e-14	63.2
MS.gene003622.t1	MTR_8g461210	40.659	91	50	3	4	92	14	102	3.11e-14	63.2
MS.gene003622.t1	MTR_1g009150	50.000	60	29	1	25	84	70	128	3.66e-14	64.3
MS.gene003622.t1	MTR_3g105900	62.791	43	16	0	23	65	1169	1211	8.66e-14	65.5
MS.gene003622.t1	MTR_4g072160	46.774	62	32	1	25	86	36	96	1.52e-13	62.0
MS.gene003622.t1	MTR_2g095430	39.759	83	43	3	10	86	27	108	3.76e-13	60.8
MS.gene003622.t1	MTR_1g059770	40.000	65	38	1	26	90	49	112	4.66e-13	60.5
MS.gene003622.t1	MTR_4g005320	44.262	61	33	1	26	86	70	129	6.42e-13	60.8
MS.gene003622.t1	MTR_3g109160	39.759	83	49	1	10	92	53	134	1.19e-12	60.5
MS.gene003622.t1	MTR_7g101740	45.312	64	34	1	25	88	39	101	1.47e-12	58.9
MS.gene003622.t1	MTR_3g098970	32.099	81	53	2	13	93	41	119	1.29e-11	57.4
MS.gene003622.t1	MTR_8g101520	34.483	87	52	2	9	91	29	114	2.32e-11	56.6
MS.gene003622.t1	MTR_7g104940	38.710	62	37	1	29	90	53	113	4.06e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003622.t1	AT5G18060	67.105	76	24	1	17	91	15	90	4.00e-34	112
MS.gene003622.t1	AT4G38840	61.176	85	32	1	8	91	15	99	6.60e-34	112
MS.gene003622.t1	AT5G18020	67.568	74	23	1	17	89	15	88	3.72e-33	110
MS.gene003622.t1	AT5G18050	64.474	76	26	1	17	91	15	90	4.26e-33	110
MS.gene003622.t1	AT5G18080	65.789	76	25	1	17	91	15	90	4.71e-33	110
MS.gene003622.t1	AT5G18030	66.216	74	24	1	19	91	15	88	7.19e-32	107
MS.gene003622.t1	AT5G18010	63.158	76	27	1	17	91	15	90	1.35e-31	106
MS.gene003622.t1	AT2G21200	66.197	71	23	1	21	90	16	86	3.05e-31	105
MS.gene003622.t1	AT3G03840	64.384	73	24	1	22	92	23	95	1.06e-30	104
MS.gene003622.t1	AT4G38825	55.682	88	36	2	5	91	4	89	3.35e-30	102
MS.gene003622.t1	AT4G34770	60.000	85	29	2	10	92	22	103	5.08e-30	102
MS.gene003622.t1	AT3G03850	67.647	68	20	1	27	92	26	93	5.27e-30	102
MS.gene003622.t1	AT2G21210	47.368	95	46	2	1	91	1	95	1.84e-29	101
MS.gene003622.t1	AT3G03820	52.128	94	39	2	2	92	6	96	3.77e-29	100
MS.gene003622.t1	AT4G38850	57.471	87	24	2	8	91	13	89	4.35e-29	100
MS.gene003622.t1	AT2G21210	47.368	95	46	2	1	91	68	162	1.50e-28	101
MS.gene003622.t1	AT3G03830	53.409	88	34	2	11	91	5	92	1.83e-27	96.3
MS.gene003622.t1	AT4G34800	52.326	86	33	2	1	83	1	81	2.07e-27	96.3
MS.gene003622.t1	AT4G34810	58.750	80	27	3	17	90	38	117	2.22e-27	96.7
MS.gene003622.t1	AT4G38860	58.824	68	28	0	24	91	38	105	5.41e-25	90.1
MS.gene003622.t1	AT4G13790	55.072	69	29	1	24	90	23	91	5.67e-25	89.7
MS.gene003622.t1	AT2G21220	59.701	67	26	1	24	90	38	103	1.12e-24	89.4
MS.gene003622.t1	AT4G34760	59.701	67	26	1	24	90	41	106	2.08e-24	89.0
MS.gene003622.t1	AT1G75580	61.194	67	25	1	24	90	42	107	2.28e-24	89.0
MS.gene003622.t1	AT4G34780	47.312	93	43	2	4	90	3	95	2.09e-23	86.3
MS.gene003622.t1	AT4G34790	55.385	65	27	1	26	88	39	103	2.55e-22	83.6
MS.gene003622.t1	AT4G36110	52.778	72	33	1	17	88	31	101	1.72e-21	81.3
MS.gene003622.t1	AT1G19830	55.224	67	29	1	24	90	46	111	4.52e-21	80.9
MS.gene003622.t1	AT2G16580	56.923	65	27	1	24	88	42	105	5.52e-21	80.1
MS.gene003622.t1	AT2G18010	54.688	64	28	1	25	88	47	109	2.02e-19	76.3
MS.gene003622.t1	AT5G66260	45.455	88	42	2	4	91	17	98	8.00e-19	74.3
MS.gene003622.t1	AT3G20220	44.737	76	40	2	15	89	36	110	1.26e-17	72.0
MS.gene003622.t1	AT3G43120	48.387	62	31	1	25	86	78	138	1.45e-16	70.5
MS.gene003622.t1	AT1G75590	44.595	74	40	1	11	84	27	99	5.40e-16	68.6
MS.gene003622.t1	AT2G46690	41.667	84	44	3	13	92	10	92	5.48e-16	67.8
MS.gene003622.t1	AT5G20810	50.000	62	30	1	25	86	78	138	6.35e-16	68.9
MS.gene003622.t1	AT3G51200	53.333	60	26	2	25	83	38	96	6.49e-16	67.4
MS.gene003622.t1	AT5G20810	50.000	62	30	1	25	86	78	138	1.47e-15	68.2
MS.gene003622.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.84e-15	67.4
MS.gene003622.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.84e-15	67.4
MS.gene003622.t1	AT5G10990	48.333	60	30	1	25	84	40	98	2.36e-15	67.0
MS.gene003622.t1	AT1G19840	48.529	68	32	2	19	84	32	98	6.60e-15	65.9
MS.gene003622.t1	AT3G61900	44.286	70	35	2	25	91	29	97	1.71e-14	64.3
MS.gene003622.t1	AT2G45210	44.118	68	34	2	26	90	79	145	4.05e-14	63.9
MS.gene003622.t1	AT3G60690	43.478	69	35	2	26	91	88	155	1.19e-13	63.2
MS.gene003622.t1	AT4G31320	49.153	59	29	1	26	84	80	137	1.68e-13	62.8
MS.gene003622.t1	AT5G53590	34.375	96	57	2	1	91	21	115	2.57e-13	61.6
MS.gene003622.t1	AT2G24400	49.180	61	30	1	26	86	64	123	4.81e-13	61.6
MS.gene003622.t1	AT2G37030	47.458	59	30	1	25	83	48	105	1.16e-12	59.3
MS.gene003622.t1	AT4G00880	44.118	68	35	2	26	91	28	94	1.32e-12	59.3
MS.gene003622.t1	AT4G09530	40.845	71	36	3	17	84	22	89	1.23e-11	56.2
MS.gene003622.t1	AT4G12410	39.706	68	37	2	26	90	76	142	1.43e-11	57.4
MS.gene003622.t1	AT3G12830	35.526	76	48	1	16	91	40	114	2.00e-11	56.2
MS.gene003622.t1	AT3G09870	43.750	64	33	2	25	86	44	106	2.49e-11	55.8
MS.gene003622.t1	AT1G56150	39.394	66	39	1	26	91	38	102	5.97e-11	54.7

Find 24 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTCAATTTGAGGAAGAGTT+TGG	0.296654	4.1:-31056847	MS.gene003622:CDS
GGTTGGTTCAAGTATGATAT+TGG	0.299968	4.1:+31056889	None:intergenic
GTTGGTTCAAGTATGATATT+GGG	0.382183	4.1:+31056890	None:intergenic
CCGATCAGCTTCGAAATTTG+TGG	0.393931	4.1:-31056971	MS.gene003622:CDS
CATATGACATCTCGCTTGAA+TGG	0.396465	4.1:-31056769	MS.gene003622:CDS
CTCAATAAGTCTTGAAATGA+TGG	0.413980	4.1:+31056868	None:intergenic
AGACTTATTGAGTCAATTTG+AGG	0.438566	4.1:-31056857	MS.gene003622:CDS
TAAATTGCAATATATCCCTT+TGG	0.463456	4.1:+31056943	None:intergenic
CCACAAATTTCGAAGCTGAT+CGG	0.483799	4.1:+31056971	None:intergenic
GAAATTTGTGGACGTGCCAA+AGG	0.518889	4.1:-31056959	MS.gene003622:CDS
ATAAGTCTTGAAATGATGGT+TGG	0.520706	4.1:+31056872	None:intergenic
CATATGTTGAAATACATCTT+CGG	0.523682	4.1:+31056786	None:intergenic
TTTCGCTGGTATCATCAGAA+AGG	0.541055	4.1:-31057010	MS.gene003622:CDS
TACATCTTCGGTGCAAGGAA+TGG	0.541149	4.1:+31056798	None:intergenic
AGGAATGGTGAGGCCACCCA+TGG	0.554354	4.1:+31056813	None:intergenic
GGATATATTGCAATTTATGT+CGG	0.558351	4.1:-31056937	MS.gene003622:CDS
AAATTTGTGGACGTGCCAAA+GGG	0.561406	4.1:-31056958	MS.gene003622:CDS
TGAAATACATCTTCGGTGCA+AGG	0.561917	4.1:+31056793	None:intergenic
GTTTGGATATGATCATCCCA+TGG	0.570301	4.1:-31056830	MS.gene003622:CDS
GGATATGATCATCCCATGGG+TGG	0.600402	4.1:-31056826	MS.gene003622:CDS
GGAATGGTGAGGCCACCCAT+GGG	0.636587	4.1:+31056814	None:intergenic
TTTGGATATGATCATCCCAT+GGG	0.641263	4.1:-31056829	MS.gene003622:CDS
CTTCGGTGCAAGGAATGGTG+AGG	0.671810	4.1:+31056803	None:intergenic
ATGTCGGAGAGAAACAAAAG+CGG	0.726695	4.1:-31056921	MS.gene003622:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CATATGTTGAAATACATCTT+CGG	+	chr4.1:31057000-31057019	None:intergenic	25.0%
!	GGATATATTGCAATTTATGT+CGG	-	chr4.1:31056846-31056865	MS.gene003622:CDS	25.0%
!	TAAATTGCAATATATCCCTT+TGG	+	chr4.1:31056843-31056862	None:intergenic	25.0%
	AGACTTATTGAGTCAATTTG+AGG	-	chr4.1:31056926-31056945	MS.gene003622:CDS	30.0%
	ATAAGTCTTGAAATGATGGT+TGG	+	chr4.1:31056914-31056933	None:intergenic	30.0%
	CTCAATAAGTCTTGAAATGA+TGG	+	chr4.1:31056918-31056937	None:intergenic	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	+	chr4.1:31056896-31056915	None:intergenic	30.0%
	AGTCAATTTGAGGAAGAGTT+TGG	-	chr4.1:31056936-31056955	MS.gene003622:CDS	35.0%
	TTTGGATATGATCATCCCAT+GGG	-	chr4.1:31056954-31056973	MS.gene003622:CDS	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	+	chr4.1:31056897-31056916	None:intergenic	35.0%
	AAATTTGTGGACGTGCCAAA+GGG	-	chr4.1:31056825-31056844	MS.gene003622:CDS	40.0%
	ATGTCGGAGAGAAACAAAAG+CGG	-	chr4.1:31056862-31056881	MS.gene003622:CDS	40.0%
	CATATGACATCTCGCTTGAA+TGG	-	chr4.1:31057014-31057033	MS.gene003622:CDS	40.0%
	CCACAAATTTCGAAGCTGAT+CGG	+	chr4.1:31056815-31056834	None:intergenic	40.0%
	GTTTGGATATGATCATCCCA+TGG	-	chr4.1:31056953-31056972	MS.gene003622:CDS	40.0%
	TTTCGCTGGTATCATCAGAA+AGG	-	chr4.1:31056773-31056792	MS.gene003622:CDS	40.0%
!	TGAAATACATCTTCGGTGCA+AGG	+	chr4.1:31056993-31057012	None:intergenic	40.0%
	CCGATCAGCTTCGAAATTTG+TGG	-	chr4.1:31056812-31056831	MS.gene003622:CDS	45.0%
	GAAATTTGTGGACGTGCCAA+AGG	-	chr4.1:31056824-31056843	MS.gene003622:CDS	45.0%
!	TACATCTTCGGTGCAAGGAA+TGG	+	chr4.1:31056988-31057007	None:intergenic	45.0%
	GGATATGATCATCCCATGGG+TGG	-	chr4.1:31056957-31056976	MS.gene003622:CDS	50.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	+	chr4.1:31056983-31057002	None:intergenic	55.0%
	AGGAATGGTGAGGCCACCCA+TGG	+	chr4.1:31056973-31056992	None:intergenic	60.0%
	GGAATGGTGAGGCCACCCAT+GGG	+	chr4.1:31056972-31056991	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	31056762	31057043	31056762	ID=MS.gene003622
chr4.1	mRNA	31056762	31057043	31056762	ID=MS.gene003622.t1;Parent=MS.gene003622
chr4.1	exon	31056762	31057043	31056762	ID=MS.gene003622.t1.exon1;Parent=MS.gene003622.t1
chr4.1	CDS	31056762	31057043	31056762	ID=cds.MS.gene003622.t1;Parent=MS.gene003622.t1

Gene Sequence	>MS.gene003622 ATGGGTTTTCGTTTCGCTGGTATCATCAGAAAGGCATCATTTTCTGCAAACCGATCAGCTTCGAAATTTGTGGACGTGCCAAAGGGATATATTGCAATTTATGTCGGAGAGAAACAAAAGCGGTATGTGATCCCAATATCATACTTGAACCAACCATCATTTCAAGACTTATTGAGTCAATTTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTATTTCAACATATGACATCTCGCTTGAATGGACTATGA
Protein sequence	>MS.gene003622.t1 MGFRFAGIIRKASFSANRSASKFVDVPKGYIAIYVGEKQKRYVIPISYLNQPSFQDLLSQFEEEFGYDHPMGGLTIPCTEDVFQHMTSRLNGL