AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003626

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003626.t1 MTR_4g072870 87.912 91 11 0 1 91 1 91 1.58e-57 172
MS.gene003626.t1 MTR_4g072260 86.022 93 13 0 1 93 1 93 2.34e-56 169
MS.gene003626.t1 MTR_4g072220 84.946 93 14 0 1 93 1 93 7.03e-55 165
MS.gene003626.t1 MTR_4g072890 83.516 91 15 0 1 91 1 91 1.31e-53 162
MS.gene003626.t1 MTR_4g072240 79.121 91 19 0 1 91 1 91 2.25e-52 159
MS.gene003626.t1 MTR_4g072300 78.022 91 20 0 1 91 1 91 5.54e-51 155
MS.gene003626.t1 MTR_4g072370 72.527 91 22 1 1 91 1 88 1.40e-45 141
MS.gene003626.t1 MTR_4g072310 66.667 93 31 0 1 93 1 93 4.53e-45 140
MS.gene003626.t1 MTR_3g110038 69.892 93 27 1 1 93 1 92 1.64e-44 139
MS.gene003626.t1 MTR_4g072880 69.231 91 28 0 1 91 1 91 2.59e-44 138
MS.gene003626.t1 MTR_4g072330 69.231 91 25 1 1 91 1 88 3.55e-44 138
MS.gene003626.t1 MTR_4g072580 71.429 91 20 1 1 91 1 85 5.04e-44 137
MS.gene003626.t1 MTR_3g084150 66.667 93 30 1 1 93 1 92 3.65e-43 135
MS.gene003626.t1 MTR_3g084240 66.667 93 30 1 1 93 1 92 1.46e-42 134
MS.gene003626.t1 MTR_3g084180 65.591 93 31 1 1 93 1 92 2.02e-42 134
MS.gene003626.t1 MTR_4g072500 64.516 93 32 1 1 93 1 92 3.00e-42 133
MS.gene003626.t1 MTR_4g072830 69.231 91 25 1 1 91 1 88 3.23e-42 133
MS.gene003626.t1 MTR_3g084170 66.667 93 30 1 1 93 1 92 5.26e-42 132
MS.gene003626.t1 MTR_8g461410 64.516 93 32 1 1 93 1 92 8.42e-42 132
MS.gene003626.t1 MTR_4g072740 68.132 91 23 1 1 91 1 85 1.49e-41 131
MS.gene003626.t1 MTR_4g072230 65.591 93 30 1 1 93 1 91 2.59e-41 130
MS.gene003626.t1 MTR_4g072470 68.132 91 23 1 1 91 1 85 2.98e-41 130
MS.gene003626.t1 MTR_4g072270 64.516 93 33 0 1 93 1 93 3.03e-41 130
MS.gene003626.t1 MTR_4g072570 65.591 93 31 1 1 93 1 92 3.21e-41 130
MS.gene003626.t1 MTR_3g110032 64.516 93 33 0 1 93 1 93 4.70e-41 130
MS.gene003626.t1 MTR_3g117630 68.675 83 26 0 11 93 10 92 7.23e-41 130
MS.gene003626.t1 MTR_4g072640 64.130 92 32 1 1 92 1 91 1.41e-40 129
MS.gene003626.t1 MTR_4g072820 71.111 90 20 2 1 90 1 84 1.49e-40 129
MS.gene003626.t1 MTR_3g084250 66.667 93 30 1 1 93 1 92 1.54e-40 129
MS.gene003626.t1 MTR_4g072530 63.736 91 32 1 1 91 1 90 1.60e-40 129
MS.gene003626.t1 MTR_4g050700 64.516 93 33 0 1 93 1 93 1.75e-40 129
MS.gene003626.t1 MTR_2g012410 64.516 93 33 0 1 93 1 93 1.75e-40 129
MS.gene003626.t1 MTR_4g072250 64.835 91 31 1 1 91 1 90 2.58e-40 128
MS.gene003626.t1 MTR_4g072860 63.441 93 34 0 1 93 1 93 2.90e-40 128
MS.gene003626.t1 MTR_3g110042 66.667 90 29 1 1 90 1 89 7.24e-40 127
MS.gene003626.t1 MTR_4g072480 63.441 93 33 1 1 93 1 92 8.43e-40 127
MS.gene003626.t1 MTR_4g072730 62.637 91 33 1 1 91 1 90 1.10e-39 127
MS.gene003626.t1 MTR_3g084220 63.441 93 33 1 1 93 1 92 1.17e-39 127
MS.gene003626.t1 MTR_4g072490 65.934 91 25 1 1 91 1 85 1.51e-39 126
MS.gene003626.t1 MTR_4g072610 65.934 91 24 1 1 91 1 84 1.82e-39 126
MS.gene003626.t1 MTR_4g072850 68.085 94 29 1 1 93 1 94 2.30e-39 126
MS.gene003626.t1 MTR_4g072630 66.304 92 24 2 1 91 1 86 2.47e-39 125
MS.gene003626.t1 MTR_3g084260 63.736 91 33 0 1 91 1 91 2.78e-39 125
MS.gene003626.t1 MTR_4g072600 67.033 91 24 1 1 91 1 85 2.87e-39 125
MS.gene003626.t1 MTR_4g072650 69.231 91 21 2 1 91 1 84 9.95e-39 124
MS.gene003626.t1 MTR_4g072680 61.290 93 35 1 1 93 1 92 1.68e-38 124
MS.gene003626.t1 MTR_4g072620 61.290 93 35 1 1 93 1 92 1.76e-38 124
MS.gene003626.t1 MTR_4g072540 64.835 91 27 1 1 91 1 86 7.73e-38 122
MS.gene003626.t1 MTR_3g084190 68.817 93 28 1 1 93 1 92 1.90e-37 121
MS.gene003626.t1 MTR_4g072460 60.215 93 36 1 1 93 1 92 2.50e-37 120
MS.gene003626.t1 MTR_8g461420 66.667 93 30 1 1 93 1 92 1.04e-36 119
MS.gene003626.t1 MTR_4g072670 61.538 91 30 1 1 91 1 86 2.01e-36 118
MS.gene003626.t1 MTR_4g072510 62.637 91 29 1 1 91 1 86 2.85e-36 118
MS.gene003626.t1 MTR_4g072940 64.130 92 32 1 3 93 33 124 5.09e-36 118
MS.gene003626.t1 MTR_3g084230 65.591 93 31 1 1 93 1 92 5.38e-36 117
MS.gene003626.t1 MTR_4g072280 73.333 75 20 0 1 75 1 75 7.68e-36 117
MS.gene003626.t1 MTR_4g072720 62.637 91 29 1 1 91 1 86 9.02e-36 117
MS.gene003626.t1 MTR_4g072660 60.215 93 31 1 1 93 1 87 9.19e-36 117
MS.gene003626.t1 MTR_3g084210 65.591 93 31 1 1 93 1 92 1.21e-35 116
MS.gene003626.t1 MTR_4g072380 63.636 88 27 1 1 88 1 83 1.93e-35 116
MS.gene003626.t1 MTR_3g084160 64.516 93 32 1 1 93 1 92 2.42e-35 115
MS.gene003626.t1 MTR_4g072465 59.783 92 30 2 1 91 1 86 4.62e-35 115
MS.gene003626.t1 MTR_3g110045 64.835 91 31 1 3 93 62 151 2.59e-34 115
MS.gene003626.t1 MTR_4g072590 73.134 67 18 0 25 91 19 85 2.74e-34 113
MS.gene003626.t1 MTR_4g072690 65.934 91 25 1 1 91 1 85 2.74e-34 113
MS.gene003626.t1 MTR_5g008370 74.627 67 17 0 25 91 24 90 8.35e-34 113
MS.gene003626.t1 MTR_5g008360 64.474 76 27 0 18 93 8 83 1.23e-33 111
MS.gene003626.t1 MTR_5g008350 66.250 80 21 1 1 80 1 74 3.95e-33 110
MS.gene003626.t1 MTR_4g072550 65.753 73 25 0 21 93 31 103 2.49e-32 108
MS.gene003626.t1 MTR_4g072450 62.637 91 28 1 1 91 1 85 1.27e-31 106
MS.gene003626.t1 MTR_4g072910 67.164 67 22 0 25 91 34 100 1.84e-31 106
MS.gene003626.t1 MTR_3g084200 65.753 73 24 1 1 73 1 72 5.03e-31 105
MS.gene003626.t1 MTR_4g072980 52.174 92 42 2 1 90 1 92 6.65e-31 104
MS.gene003626.t1 MTR_4g072770 66.667 66 22 0 26 91 15 80 1.66e-30 103
MS.gene003626.t1 MTR_3g117640 65.672 67 22 1 25 90 33 99 3.06e-30 103
MS.gene003626.t1 MTR_4g072560 65.672 67 22 1 25 90 31 97 3.27e-30 103
MS.gene003626.t1 MTR_4g072750 65.333 75 23 2 1 73 1 74 1.15e-29 101
MS.gene003626.t1 MTR_4g072930 52.326 86 37 1 10 91 25 110 1.48e-28 99.4
MS.gene003626.t1 MTR_4g072290 52.688 93 30 1 1 93 1 79 1.81e-28 98.2
MS.gene003626.t1 MTR_3g110035 65.152 66 23 0 28 93 73 138 1.41e-25 92.8
MS.gene003626.t1 MTR_3g113310 56.716 67 28 1 24 90 40 105 8.59e-25 89.7
MS.gene003626.t1 MTR_3g117610 58.462 65 26 1 24 88 43 106 1.19e-23 87.0
MS.gene003626.t1 MTR_6g077850 53.731 67 31 0 25 91 33 99 1.17e-22 84.3
MS.gene003626.t1 MTR_4g072190 55.224 67 29 1 24 90 34 99 1.24e-22 84.0
MS.gene003626.t1 MTR_8g076040 50.000 80 36 2 12 88 24 102 2.12e-21 81.3
MS.gene003626.t1 MTR_5g021820 47.778 90 42 4 5 90 15 103 2.36e-21 80.9
MS.gene003626.t1 MTR_4g072840 53.333 90 11 3 1 90 1 59 9.13e-20 75.9
MS.gene003626.t1 MTR_8g461400 45.161 93 24 2 1 93 1 66 1.39e-19 75.5
MS.gene003626.t1 MTR_4g124750 56.250 64 27 1 25 88 68 130 2.24e-18 74.7
MS.gene003626.t1 MTR_2g043960 59.322 59 23 1 25 83 75 132 2.48e-18 74.7
MS.gene003626.t1 MTR_4g005310 50.725 69 33 1 19 86 55 123 2.49e-18 74.7
MS.gene003626.t1 MTR_4g025830 45.833 72 35 2 23 91 76 146 4.27e-16 68.9
MS.gene003626.t1 MTR_1g094750 40.698 86 46 2 11 92 31 115 5.58e-16 67.8
MS.gene003626.t1 MTR_0388s0020 38.824 85 47 3 10 91 60 142 5.75e-16 68.6
MS.gene003626.t1 MTR_1g009150 49.254 67 33 1 17 83 62 127 7.94e-16 68.9
MS.gene003626.t1 MTR_4g072160 43.662 71 39 1 16 86 27 96 2.16e-15 66.6
MS.gene003626.t1 MTR_3g092220 47.059 68 33 2 18 83 25 91 6.88e-15 64.7
MS.gene003626.t1 MTR_3g109160 47.887 71 36 1 13 83 56 125 7.87e-15 65.9
MS.gene003626.t1 MTR_1g024085 50.847 59 28 1 25 83 36 93 1.92e-14 64.3
MS.gene003626.t1 MTR_4g005320 50.000 58 28 1 26 83 70 126 2.26e-14 64.7
MS.gene003626.t1 MTR_7g118010 47.619 63 30 2 26 86 23 84 2.40e-14 63.2
MS.gene003626.t1 MTR_1g061570 51.786 56 26 1 25 80 18 72 7.87e-14 62.4
MS.gene003626.t1 MTR_3g097120 41.772 79 37 2 22 92 5 82 8.83e-14 61.6
MS.gene003626.t1 MTR_7g101740 45.312 64 34 1 25 88 39 101 1.14e-13 61.6
MS.gene003626.t1 MTR_1g063950 41.935 62 35 1 25 86 47 107 2.21e-13 61.2
MS.gene003626.t1 MTR_8g026730 46.667 60 29 2 26 83 27 85 2.51e-13 60.5
MS.gene003626.t1 MTR_8g461210 45.763 59 31 1 25 83 34 91 6.29e-13 59.7
MS.gene003626.t1 MTR_7g104950 38.158 76 41 2 15 90 44 113 3.23e-12 58.2
MS.gene003626.t1 MTR_1g059770 39.062 64 38 1 27 90 50 112 4.27e-12 58.2
MS.gene003626.t1 MTR_7g405740 45.000 60 32 1 27 86 68 126 7.37e-12 58.2
MS.gene003626.t1 MTR_2g066830 43.396 53 29 1 26 78 58 109 1.32e-11 57.0
MS.gene003626.t1 MTR_3g105900 63.889 36 13 0 25 60 1171 1206 1.52e-11 58.9
MS.gene003626.t1 MTR_4g021810 44.118 68 35 3 17 83 18 83 3.04e-11 55.1
MS.gene003626.t1 MTR_7g104940 36.842 76 42 2 15 90 44 113 3.42e-11 55.8
MS.gene003626.t1 MTR_8g094980 38.272 81 36 2 25 92 2 81 3.58e-11 55.1
MS.gene003626.t1 MTR_3g098970 33.333 69 45 1 25 93 52 119 4.12e-11 55.8
MS.gene003626.t1 MTR_8g096440 39.241 79 45 2 7 85 28 103 5.48e-11 55.5
MS.gene003626.t1 MTR_8g101520 42.424 66 37 1 27 92 51 115 6.03e-11 55.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003626.t1 AT2G21210 55.789 95 38 2 1 91 1 95 1.54e-33 111
MS.gene003626.t1 AT2G21210 55.789 95 38 2 1 91 68 162 6.19e-33 112
MS.gene003626.t1 AT4G38840 70.588 68 19 1 25 91 32 99 1.11e-32 109
MS.gene003626.t1 AT5G18080 54.945 91 38 2 1 90 1 89 3.27e-31 105
MS.gene003626.t1 AT5G18030 69.231 65 19 1 27 90 23 87 1.12e-30 103
MS.gene003626.t1 AT5G18020 58.667 75 30 1 17 90 15 89 2.19e-30 103
MS.gene003626.t1 AT4G38825 60.811 74 28 1 18 90 15 88 2.84e-30 103
MS.gene003626.t1 AT5G18060 67.692 65 20 1 27 90 25 89 3.05e-30 103
MS.gene003626.t1 AT5G18010 60.000 75 29 1 17 90 15 89 4.53e-30 102
MS.gene003626.t1 AT5G18050 66.154 65 21 1 27 90 25 89 6.36e-30 102
MS.gene003626.t1 AT2G21200 61.111 72 27 1 20 90 15 86 3.99e-29 100
MS.gene003626.t1 AT4G34770 60.976 82 27 2 12 91 24 102 7.75e-29 100
MS.gene003626.t1 AT3G03840 62.162 74 26 1 19 90 20 93 8.43e-29 99.8
MS.gene003626.t1 AT3G03820 61.333 75 26 1 19 90 20 94 6.86e-28 97.4
MS.gene003626.t1 AT4G38850 61.194 67 23 1 27 90 22 88 1.82e-27 95.9
MS.gene003626.t1 AT4G34810 59.155 71 24 2 25 90 47 117 7.00e-27 95.5
MS.gene003626.t1 AT4G34800 49.438 89 37 2 1 86 1 84 7.13e-27 94.7
MS.gene003626.t1 AT3G03850 63.636 66 22 1 27 90 26 91 7.91e-27 94.7
MS.gene003626.t1 AT3G03830 62.687 67 22 1 27 90 25 91 2.01e-26 93.6
MS.gene003626.t1 AT4G34790 60.000 65 24 1 26 88 39 103 7.08e-25 90.1
MS.gene003626.t1 AT4G13790 50.685 73 34 1 20 90 19 91 1.02e-24 89.4
MS.gene003626.t1 AT4G38860 55.224 67 30 0 24 90 38 104 6.90e-24 87.4
MS.gene003626.t1 AT1G75580 50.000 86 35 2 12 90 23 107 5.46e-23 85.5
MS.gene003626.t1 AT4G34780 57.143 70 27 2 25 91 27 96 5.65e-23 85.1
MS.gene003626.t1 AT4G34760 53.731 67 30 1 24 90 41 106 5.56e-22 82.8
MS.gene003626.t1 AT2G21220 53.030 66 30 1 25 90 39 103 7.04e-22 82.4
MS.gene003626.t1 AT1G19830 52.778 72 33 1 19 90 41 111 1.38e-21 82.0
MS.gene003626.t1 AT4G36110 50.685 73 35 1 16 88 30 101 2.21e-20 78.6
MS.gene003626.t1 AT2G16580 52.239 67 31 1 24 90 42 107 2.56e-19 75.9
MS.gene003626.t1 AT3G43120 57.627 59 24 1 25 83 78 135 5.04e-19 76.6
MS.gene003626.t1 AT2G18010 53.125 64 29 1 25 88 47 109 2.19e-18 73.6
MS.gene003626.t1 AT5G20810 54.545 66 29 1 18 83 71 135 4.08e-18 74.3
MS.gene003626.t1 AT5G20810 54.545 66 29 1 18 83 71 135 7.97e-18 74.3
MS.gene003626.t1 AT3G20220 50.769 65 30 2 26 89 47 110 5.76e-17 70.1
MS.gene003626.t1 AT5G66260 51.515 66 31 1 26 91 34 98 5.92e-17 69.7
MS.gene003626.t1 AT3G51200 49.206 63 30 2 25 86 38 99 2.36e-15 65.9
MS.gene003626.t1 AT1G75590 47.222 72 33 2 12 83 32 98 4.11e-15 66.2
MS.gene003626.t1 AT2G37030 44.444 63 34 1 25 87 48 109 2.16e-14 63.9
MS.gene003626.t1 AT5G10990 49.153 59 29 1 25 83 40 97 5.49e-14 63.5
MS.gene003626.t1 AT5G53590 41.096 73 37 2 25 92 45 116 6.63e-14 63.2
MS.gene003626.t1 AT2G45210 39.726 73 40 2 22 91 75 146 9.83e-14 63.2
MS.gene003626.t1 AT1G19840 50.847 59 28 1 25 83 40 97 1.24e-13 62.4
MS.gene003626.t1 AT3G53250 42.857 63 32 1 25 87 51 109 1.95e-13 61.2
MS.gene003626.t1 AT3G53250 42.857 63 32 1 25 87 82 140 2.43e-13 62.0
MS.gene003626.t1 AT4G12410 44.928 69 34 2 26 91 76 143 2.52e-13 62.0
MS.gene003626.t1 AT4G31320 49.231 65 32 1 14 78 68 131 2.65e-13 62.4
MS.gene003626.t1 AT3G60690 42.647 68 35 2 26 90 88 154 2.66e-13 62.0
MS.gene003626.t1 AT2G46690 40.244 82 44 3 6 83 3 83 5.67e-13 60.1
MS.gene003626.t1 AT4G09530 44.444 63 32 2 27 86 29 91 8.49e-13 59.3
MS.gene003626.t1 AT4G34750 44.068 59 32 1 25 83 36 93 1.16e-12 60.1
MS.gene003626.t1 AT4G34750 44.068 59 32 1 25 83 36 93 1.16e-12 60.1
MS.gene003626.t1 AT2G24400 51.724 58 27 1 26 83 64 120 1.43e-12 60.5
MS.gene003626.t1 AT4G00880 50.820 61 27 2 25 83 27 86 1.90e-12 58.9
MS.gene003626.t1 AT3G61900 45.161 62 30 2 25 83 29 89 2.26e-12 58.9
MS.gene003626.t1 AT3G12830 41.558 77 37 3 2 78 33 101 5.96e-12 57.8
MS.gene003626.t1 AT4G22620 40.580 69 37 2 26 91 79 146 9.42e-12 57.8
MS.gene003626.t1 AT1G56150 39.683 63 37 1 16 78 28 89 4.37e-11 55.1
MS.gene003626.t1 AT3G03847 52.830 53 23 2 34 86 80 130 5.73e-11 55.1

Find 24 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGTAGATCCTTGAGTTT+TGG 0.251706 4.1:-31069752 None:intergenic
AATCAAGCAGAAGAAGAATT+TGG 0.271748 4.1:+31069883 MS.gene003626:CDS
TAGACTGCAAGATAGCCTTT+TGG 0.386300 4.1:-31069787 None:intergenic
GGCTGGCTCAAATATGATAC+TGG 0.405573 4.1:-31069841 None:intergenic
GGCTATCTTGCAGTCTATGT+TGG 0.480274 4.1:+31069793 MS.gene003626:CDS
TGATGCCCTTGTGGTAATAC+CGG 0.503182 4.1:-31069725 None:intergenic
GTAATTCTTGAAACGATGGC+TGG 0.519820 4.1:-31069858 None:intergenic
AAGGGATTTGAAATCCCAAA+AGG 0.535913 4.1:+31069772 MS.gene003626:CDS
TTTGGATATGATCATCCAAT+GGG 0.541874 4.1:+31069901 MS.gene003626:CDS
AGAATGGGTTTCCGCATAGC+CGG 0.550842 4.1:+31069706 None:intergenic
ATTTGGATATGATCATCCAA+TGG 0.556875 4.1:+31069900 MS.gene003626:CDS
TTTAGTAATTCTTGAAACGA+TGG 0.570741 4.1:-31069862 None:intergenic
GGAATTGTAAGACCACCCAT+TGG 0.603707 4.1:-31069916 None:intergenic
CAAAACTCAAGGATCTACGA+AGG 0.612377 4.1:+31069753 MS.gene003626:CDS
TCTATGTTGGAGATAGAATG+AGG 0.630157 4.1:+31069806 MS.gene003626:CDS
AAGAAAGCATCTTCACCGCA+AGG 0.631158 4.1:-31069937 None:intergenic
AAAACTCAAGGATCTACGAA+GGG 0.636297 4.1:+31069754 MS.gene003626:CDS
TTTGGAAAATGATGCCCTTG+TGG 0.638586 4.1:-31069734 None:intergenic
GGATATGATCATCCAATGGG+TGG 0.655640 4.1:+31069904 MS.gene003626:CDS
GCATAGCCGGTATTACCACA+AGG 0.668124 4.1:+31069719 MS.gene003626:CDS
GGTGGTCTTACAATTCCTTG+CGG 0.688498 4.1:+31069922 MS.gene003626:CDS
TTGTGGTAATACCGGCTATG+CGG 0.715207 4.1:-31069717 None:intergenic
CATAGCCGGTATTACCACAA+GGG 0.738270 4.1:+31069720 MS.gene003626:CDS
ATGTTGGAGATAGAATGAGG+CGG 0.759369 4.1:+31069809 MS.gene003626:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTTAGTAATTCTTGAAACGA+TGG - chr4.1:31069865-31069884 None:intergenic 25.0%
AATCAAGCAGAAGAAGAATT+TGG + chr4.1:31069883-31069902 MS.gene003626:CDS 30.0%
ATTTGGATATGATCATCCAA+TGG + chr4.1:31069900-31069919 MS.gene003626:CDS 30.0%
TTTGGATATGATCATCCAAT+GGG + chr4.1:31069901-31069920 MS.gene003626:CDS 30.0%
AAAACTCAAGGATCTACGAA+GGG + chr4.1:31069754-31069773 MS.gene003626:CDS 35.0%
TCTATGTTGGAGATAGAATG+AGG + chr4.1:31069806-31069825 MS.gene003626:CDS 35.0%
! AAGGGATTTGAAATCCCAAA+AGG + chr4.1:31069772-31069791 MS.gene003626:CDS 35.0%
! GCATCATTTTCCAAAACTCA+AGG + chr4.1:31069742-31069761 MS.gene003626:CDS 35.0%
ATGTTGGAGATAGAATGAGG+CGG + chr4.1:31069809-31069828 MS.gene003626:CDS 40.0%
CAAAACTCAAGGATCTACGA+AGG + chr4.1:31069753-31069772 MS.gene003626:CDS 40.0%
GTAATTCTTGAAACGATGGC+TGG - chr4.1:31069861-31069880 None:intergenic 40.0%
TTTGGAAAATGATGCCCTTG+TGG - chr4.1:31069737-31069756 None:intergenic 40.0%
! AGACTGCAAGATAGCCTTTT+GGG - chr4.1:31069789-31069808 None:intergenic 40.0%
! CTTCGTAGATCCTTGAGTTT+TGG - chr4.1:31069755-31069774 None:intergenic 40.0%
! TAGACTGCAAGATAGCCTTT+TGG - chr4.1:31069790-31069809 None:intergenic 40.0%
CATAGCCGGTATTACCACAA+GGG + chr4.1:31069720-31069739 MS.gene003626:CDS 45.0%
GGAATTGTAAGACCACCCAT+TGG - chr4.1:31069919-31069938 None:intergenic 45.0%
GGATATGATCATCCAATGGG+TGG + chr4.1:31069904-31069923 MS.gene003626:CDS 45.0%
GGCTATCTTGCAGTCTATGT+TGG + chr4.1:31069793-31069812 MS.gene003626:CDS 45.0%
TGATGCCCTTGTGGTAATAC+CGG - chr4.1:31069728-31069747 None:intergenic 45.0%
! GGCTGGCTCAAATATGATAC+TGG - chr4.1:31069844-31069863 None:intergenic 45.0%
! GGTGGTCTTACAATTCCTTG+CGG + chr4.1:31069922-31069941 MS.gene003626:CDS 45.0%
! TTGTGGTAATACCGGCTATG+CGG - chr4.1:31069720-31069739 None:intergenic 45.0%
!! AAGAAAGCATCTTCACCGCA+AGG - chr4.1:31069940-31069959 None:intergenic 45.0%
GCATAGCCGGTATTACCACA+AGG + chr4.1:31069719-31069738 MS.gene003626:CDS 50.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 31069709 31069990 31069709 ID=MS.gene003626
chr4.1 mRNA 31069709 31069990 31069709 ID=MS.gene003626.t1;Parent=MS.gene003626
chr4.1 exon 31069709 31069990 31069709 ID=MS.gene003626.t1.exon1;Parent=MS.gene003626.t1
chr4.1 CDS 31069709 31069990 31069709 ID=cds.MS.gene003626.t1;Parent=MS.gene003626.t1
Gene Sequence

>MS.gene003626

ATGGGTTTCCGCATAGCCGGTATTACCACAAGGGCATCATTTTCCAAAACTCAAGGATCTACGAAGGGATTTGAAATCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAGAATGAGGCGGTTCGTGATTCCAGTATCATATTTGAGCCAGCCATCGTTTCAAGAATTACTAAATCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTTACAATTCCTTGCGGTGAAGATGCTTTCTTACAACTCACTTCTCGCTTAAGTGAGTTGTAA
Protein sequence

>MS.gene003626.t1

MGFRIAGITTRASFSKTQGSTKGFEIPKGYLAVYVGDRMRRFVIPVSYLSQPSFQELLNQAEEEFGYDHPMGGLTIPCGEDAFLQLTSRLSEL