AlfalfaGEDB | MS.gene003628

M. sativa cultivar XinJiangDaYe / MS.gene003628

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003628.t1	XP_003607106.1	98.9	91	1	0	1	91	1	91	3.40E-44	187.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003628.t1	P33079	72.5	91	25	0	1	91	1	91	2.1e-34	146.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003628.t1	G7JL28	98.9	91	1	0	1	91	1	91	2.4e-44	187.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003628	MS.gene003577	PPI
MS.gene77523	MS.gene003628	PPI
MS.gene003628	MS.gene75672	PPI
MS.gene003587	MS.gene003628	PPI
MS.gene003628	MS.gene75674	PPI
MS.gene003628	MS.gene50654	PPI
MS.gene003628	MS.gene50675	PPI
MS.gene003628	MS.gene062974	PPI
MS.gene003628	MS.gene014670	PPI
MS.gene003628	MS.gene057801	PPI
MS.gene003628	MS.gene77524	PPI
MS.gene003628	MS.gene68162	PPI
MS.gene79890	MS.gene003628	PPI
MS.gene003628	MS.gene75675	PPI
MS.gene003615	MS.gene003628	PPI
MS.gene003628	MS.gene79887	PPI
MS.gene062973	MS.gene003628	PPI
MS.gene003602	MS.gene003628	PPI
MS.gene047517	MS.gene003628	PPI
MS.gene003628	MS.gene75679	PPI
MS.gene003628	MS.gene68761	PPI
MS.gene003628	MS.gene40325	PPI
MS.gene003628	MS.gene68165	PPI
MS.gene003628	MS.gene50677	PPI
MS.gene40327	MS.gene003628	PPI
MS.gene003628	MS.gene50684	PPI
MS.gene003628	MS.gene057797	PPI
MS.gene003628	MS.gene045362	PPI
MS.gene003628	MS.gene003614	PPI
MS.gene003628	MS.gene23372	PPI
MS.gene003628	MS.gene014668	PPI
MS.gene003628	MS.gene79886	PPI
MS.gene003628	MS.gene50765	PPI
MS.gene003628	MS.gene003596	PPI
MS.gene003628	MS.gene062988	PPI
MS.gene003628	MS.gene23371	PPI
MS.gene003591	MS.gene003628	PPI
MS.gene062979	MS.gene003628	PPI
MS.gene003590	MS.gene003628	PPI
MS.gene062943	MS.gene003628	PPI
MS.gene063112	MS.gene003628	PPI
MS.gene003628	MS.gene003583	PPI
MS.gene003628	MS.gene062951	PPI
MS.gene003628	MS.gene77527	PPI
MS.gene003628	MS.gene79891	PPI
MS.gene003628	MS.gene057795	PPI
MS.gene003628	MS.gene045367	PPI
MS.gene003628	MS.gene045364	PPI
MS.gene003608	MS.gene003628	PPI
MS.gene003628	MS.gene045363	PPI
MS.gene003628	MS.gene50652	PPI
MS.gene003628	MS.gene014669	PPI
MS.gene003628	MS.gene057808	PPI
MS.gene003628	MS.gene002380	PPI
MS.gene50676	MS.gene003628	PPI
MS.gene50766	MS.gene003628	PPI
MS.gene75677	MS.gene003628	PPI
MS.gene003628	MS.gene77526	PPI
MS.gene003628	MS.gene045366	PPI
MS.gene003625	MS.gene003628	PPI
MS.gene003628	MS.gene68163	PPI
MS.gene003628	MS.gene75315	PPI
MS.gene045361	MS.gene003628	PPI
MS.gene003628	MS.gene057818	PPI
MS.gene003628	MS.gene68164	PPI
MS.gene003628	MS.gene68759	PPI
MS.gene003628	MS.gene003586	PPI
MS.gene003628	MS.gene79889	PPI
MS.gene003628	MS.gene003627	PPI
MS.gene50763	MS.gene003628	PPI
MS.gene003628	MS.gene031200	PPI
MS.gene003628	MS.gene79888	PPI
MS.gene003628	MS.gene75676	PPI
MS.gene01358	MS.gene003628	PPI
MS.gene003628	MS.gene031199	PPI
MS.gene003628	MS.gene50687	PPI
MS.gene003628	MS.gene014223	PPI
MS.gene057790	MS.gene003628	PPI
MS.gene40326	MS.gene003628	PPI
MS.gene062952	MS.gene003628	PPI
MS.gene003628	MS.gene79885	PPI
MS.gene23370	MS.gene003628	PPI
MS.gene77529	MS.gene003628	PPI
MS.gene014667	MS.gene003628	PPI
MS.gene003594	MS.gene003628	PPI
MS.gene003628	MS.gene062963	PPI
MS.gene50665	MS.gene003628	PPI
MS.gene057778	MS.gene003628	PPI
MS.gene003628	MS.gene045368	PPI
MS.gene003628	MS.gene045360	PPI
MS.gene003628	MS.gene014222	PPI
MS.gene045365	MS.gene003628	PPI
MS.gene003628	MS.gene75678	PPI
MS.gene003628	MS.gene75314	PPI
MS.gene003628	MS.gene01764	PPI
MS.gene50659	MS.gene003628	PPI
MS.gene75316	MS.gene003628	PPI
MS.gene003628	MS.gene75673	PPI
MS.gene062984	MS.gene003628	PPI
MS.gene003624	MS.gene003628	PPI
MS.gene031201	MS.gene003628	PPI
MS.gene003628	MS.gene68760	PPI
MS.gene003628	MS.gene031198	PPI
MS.gene003628	MS.gene50764	PPI
MS.gene003628	MS.gene77528	PPI
MS.gene003628	MS.gene014671	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003628.t1	MTR_4g072300	98.901	91	1	0	1	91	1	91	2.83e-64	189
MS.gene003628.t1	MTR_4g072240	96.703	91	3	0	1	91	1	91	5.80e-63	185
MS.gene003628.t1	MTR_4g072220	90.110	91	9	0	1	91	1	91	1.06e-59	177
MS.gene003628.t1	MTR_4g072890	87.912	91	11	0	1	91	1	91	8.11e-58	172
MS.gene003628.t1	MTR_4g072260	84.615	91	14	0	1	91	1	91	2.13e-55	166
MS.gene003628.t1	MTR_4g072870	83.516	91	15	0	1	91	1	91	2.71e-54	163
MS.gene003628.t1	MTR_4g072310	69.231	91	28	0	1	91	1	91	1.17e-46	144
MS.gene003628.t1	MTR_3g084150	72.527	91	24	1	1	91	1	90	7.65e-45	139
MS.gene003628.t1	MTR_4g072880	69.231	91	28	0	1	91	1	91	9.19e-45	139
MS.gene003628.t1	MTR_4g072250	69.231	91	27	1	1	91	1	90	3.15e-44	138
MS.gene003628.t1	MTR_4g072500	68.132	91	28	1	1	91	1	90	3.92e-44	138
MS.gene003628.t1	MTR_3g084180	71.429	91	25	1	1	91	1	90	5.11e-44	137
MS.gene003628.t1	MTR_4g072370	68.132	91	26	1	1	91	1	88	1.05e-43	137
MS.gene003628.t1	MTR_3g084240	70.330	91	26	1	1	91	1	90	1.20e-43	137
MS.gene003628.t1	MTR_4g072640	68.132	91	28	1	1	91	1	90	2.03e-43	136
MS.gene003628.t1	MTR_8g461410	70.330	91	26	1	1	91	1	90	2.10e-43	136
MS.gene003628.t1	MTR_3g110038	72.527	91	24	1	1	91	1	90	2.30e-43	136
MS.gene003628.t1	MTR_4g072330	69.231	91	25	1	1	91	1	88	3.28e-43	135
MS.gene003628.t1	MTR_3g084170	70.330	91	26	1	1	91	1	90	4.73e-43	135
MS.gene003628.t1	MTR_4g072230	67.033	91	28	1	1	91	1	89	9.17e-43	134
MS.gene003628.t1	MTR_4g072730	65.934	91	30	1	1	91	1	90	9.77e-43	134
MS.gene003628.t1	MTR_4g072530	65.934	91	30	1	1	91	1	90	1.18e-42	134
MS.gene003628.t1	MTR_4g072570	67.033	91	29	1	1	91	1	90	1.81e-42	134
MS.gene003628.t1	MTR_4g072480	65.934	91	30	1	1	91	1	90	3.98e-42	133
MS.gene003628.t1	MTR_4g072680	65.934	91	30	1	1	91	1	90	7.04e-42	132
MS.gene003628.t1	MTR_4g072830	68.889	90	25	1	1	90	1	87	7.48e-42	132
MS.gene003628.t1	MTR_4g072270	65.934	91	31	0	1	91	1	91	9.43e-42	132
MS.gene003628.t1	MTR_4g072860	65.934	91	31	0	1	91	1	91	1.63e-41	131
MS.gene003628.t1	MTR_4g050700	67.033	91	30	0	1	91	1	91	1.69e-41	131
MS.gene003628.t1	MTR_2g012410	67.033	91	30	0	1	91	1	91	1.69e-41	131
MS.gene003628.t1	MTR_3g110032	65.934	91	31	0	1	91	1	91	1.99e-41	131
MS.gene003628.t1	MTR_4g072280	81.333	75	14	0	1	75	1	75	3.30e-41	130
MS.gene003628.t1	MTR_4g072620	62.637	91	33	1	1	91	1	90	6.11e-41	130
MS.gene003628.t1	MTR_3g117630	67.045	88	29	0	4	91	3	90	6.11e-41	130
MS.gene003628.t1	MTR_4g072630	67.033	91	25	1	1	91	1	86	7.60e-41	129
MS.gene003628.t1	MTR_4g072580	65.934	91	25	1	1	91	1	85	1.23e-40	129
MS.gene003628.t1	MTR_4g072460	64.835	91	31	1	1	91	1	90	1.27e-40	129
MS.gene003628.t1	MTR_3g084220	67.033	91	29	1	1	91	1	90	2.00e-40	128
MS.gene003628.t1	MTR_3g110042	69.318	88	26	1	1	88	1	87	8.98e-40	127
MS.gene003628.t1	MTR_4g072740	65.934	91	25	1	1	91	1	85	1.03e-39	126
MS.gene003628.t1	MTR_3g084250	65.934	91	30	1	1	91	1	90	1.41e-39	126
MS.gene003628.t1	MTR_4g072490	65.934	91	25	1	1	91	1	85	2.70e-39	125
MS.gene003628.t1	MTR_4g072470	64.835	91	26	1	1	91	1	85	1.15e-38	124
MS.gene003628.t1	MTR_4g072660	62.637	91	28	1	1	91	1	85	1.97e-38	123
MS.gene003628.t1	MTR_3g084260	63.736	91	33	0	1	91	1	91	2.62e-38	123
MS.gene003628.t1	MTR_4g072850	65.217	92	31	1	1	91	1	92	3.59e-38	123
MS.gene003628.t1	MTR_4g072610	62.637	91	27	1	1	91	1	84	1.11e-37	121
MS.gene003628.t1	MTR_4g072600	62.637	91	28	1	1	91	1	85	3.85e-37	120
MS.gene003628.t1	MTR_4g072820	62.637	91	28	1	1	91	1	85	4.97e-37	120
MS.gene003628.t1	MTR_4g072540	64.835	91	27	1	1	91	1	86	5.25e-37	120
MS.gene003628.t1	MTR_4g072670	64.835	91	27	1	1	91	1	86	9.29e-37	119
MS.gene003628.t1	MTR_5g008360	64.198	81	29	0	11	91	1	81	1.10e-36	119
MS.gene003628.t1	MTR_4g072465	61.538	91	30	1	1	91	1	86	1.28e-36	119
MS.gene003628.t1	MTR_4g072650	61.538	91	28	1	1	91	1	84	3.00e-36	118
MS.gene003628.t1	MTR_3g084190	69.231	91	27	1	1	91	1	90	9.18e-36	117
MS.gene003628.t1	MTR_4g072510	63.736	91	28	1	1	91	1	86	1.20e-35	116
MS.gene003628.t1	MTR_3g084160	68.132	91	28	1	1	91	1	90	3.07e-35	115
MS.gene003628.t1	MTR_4g072720	62.637	91	29	1	1	91	1	86	3.14e-35	115
MS.gene003628.t1	MTR_4g072590	68.293	82	26	0	10	91	4	85	4.15e-35	115
MS.gene003628.t1	MTR_4g072940	71.429	70	20	0	22	91	53	122	4.94e-35	116
MS.gene003628.t1	MTR_3g084210	64.835	91	31	1	1	91	1	90	1.17e-34	114
MS.gene003628.t1	MTR_5g008370	69.863	73	22	0	19	91	18	90	1.37e-34	115
MS.gene003628.t1	MTR_8g461420	65.934	91	30	1	1	91	1	90	1.47e-34	114
MS.gene003628.t1	MTR_4g072550	62.069	87	32	1	6	91	15	101	1.83e-34	114
MS.gene003628.t1	MTR_3g084230	65.934	91	30	1	1	91	1	90	3.65e-34	112
MS.gene003628.t1	MTR_5g008350	66.250	80	21	1	1	80	1	74	1.89e-33	110
MS.gene003628.t1	MTR_4g072380	64.130	92	26	2	1	91	1	86	2.51e-33	110
MS.gene003628.t1	MTR_4g072690	62.637	91	28	1	1	91	1	85	2.86e-33	110
MS.gene003628.t1	MTR_3g110045	67.470	83	27	0	9	91	67	149	7.04e-33	111
MS.gene003628.t1	MTR_3g084200	68.493	73	22	1	1	73	1	72	2.61e-32	108
MS.gene003628.t1	MTR_4g072450	61.538	91	29	1	1	91	1	85	4.63e-32	107
MS.gene003628.t1	MTR_4g072910	60.000	85	33	1	7	91	17	100	1.29e-31	106
MS.gene003628.t1	MTR_4g072770	68.182	66	21	0	26	91	15	80	3.28e-31	105
MS.gene003628.t1	MTR_4g072980	62.338	77	25	2	15	90	19	92	2.34e-30	103
MS.gene003628.t1	MTR_3g117640	65.672	67	22	1	26	91	34	100	3.02e-30	103
MS.gene003628.t1	MTR_4g072290	52.747	91	29	1	1	91	1	77	2.41e-29	100
MS.gene003628.t1	MTR_4g072750	67.568	74	21	2	1	72	1	73	8.24e-29	99.4
MS.gene003628.t1	MTR_4g072560	60.606	66	25	1	26	90	32	97	1.49e-28	99.0
MS.gene003628.t1	MTR_4g072930	47.059	102	43	2	1	91	9	110	3.30e-27	95.9
MS.gene003628.t1	MTR_3g110035	62.500	64	24	0	28	91	73	136	1.17e-24	90.1
MS.gene003628.t1	MTR_3g113310	52.239	67	31	1	24	90	40	105	9.93e-24	87.0
MS.gene003628.t1	MTR_3g117610	56.716	67	28	1	24	90	43	108	1.53e-23	86.7
MS.gene003628.t1	MTR_4g072190	52.703	74	34	1	15	88	25	97	3.34e-23	85.5
MS.gene003628.t1	MTR_6g077850	47.761	67	35	0	25	91	33	99	3.58e-22	82.8
MS.gene003628.t1	MTR_5g021820	47.619	84	40	3	10	90	21	103	4.07e-21	80.5
MS.gene003628.t1	MTR_8g076040	53.125	64	29	1	25	88	40	102	2.73e-20	78.2
MS.gene003628.t1	MTR_8g461400	48.352	91	20	2	1	91	1	64	2.89e-20	77.0
MS.gene003628.t1	MTR_4g072160	45.977	87	46	1	4	90	15	100	2.00e-19	77.0
MS.gene003628.t1	MTR_4g025830	50.704	71	31	2	23	90	76	145	5.99e-19	76.3
MS.gene003628.t1	MTR_4g124750	45.455	88	43	2	7	90	46	132	6.92e-19	75.9
MS.gene003628.t1	MTR_3g092220	40.000	85	48	2	9	91	16	99	1.30e-18	74.3
MS.gene003628.t1	MTR_7g118010	50.000	68	31	2	26	91	23	89	2.11e-18	73.6
MS.gene003628.t1	MTR_4g005310	52.381	63	29	1	25	86	61	123	2.36e-18	74.7
MS.gene003628.t1	MTR_2g043960	47.619	84	42	2	4	86	53	135	2.62e-18	74.7
MS.gene003628.t1	MTR_0388s0020	44.706	85	42	3	7	88	57	139	5.59e-18	73.6
MS.gene003628.t1	MTR_8g026730	47.059	68	33	2	26	91	27	93	4.91e-17	70.1
MS.gene003628.t1	MTR_1g009150	45.714	70	37	1	17	86	62	130	2.16e-16	70.1
MS.gene003628.t1	MTR_1g024085	45.679	81	32	2	4	84	26	94	6.63e-16	68.2
MS.gene003628.t1	MTR_4g072840	44.565	92	18	3	1	91	1	60	6.82e-16	65.9
MS.gene003628.t1	MTR_1g061570	51.613	62	29	1	25	86	18	78	8.43e-16	67.4
MS.gene003628.t1	MTR_1g094750	43.210	81	42	2	9	86	30	109	1.01e-15	67.0
MS.gene003628.t1	MTR_4g005320	45.902	61	32	1	26	86	70	129	1.30e-14	65.1
MS.gene003628.t1	MTR_3g109160	42.683	82	46	1	5	86	48	128	1.93e-14	65.1
MS.gene003628.t1	MTR_3g097120	43.590	78	35	2	21	90	4	80	2.50e-14	63.2
MS.gene003628.t1	MTR_8g461210	46.774	62	32	1	25	86	34	94	3.60e-14	62.8
MS.gene003628.t1	MTR_2g066830	43.243	74	31	2	5	78	47	109	5.71e-14	63.2
MS.gene003628.t1	MTR_7g101740	45.312	64	34	1	25	88	39	101	1.98e-13	60.8
MS.gene003628.t1	MTR_3g098970	36.842	76	47	1	16	91	43	117	4.63e-13	60.8
MS.gene003628.t1	MTR_7g405740	45.455	66	35	1	26	91	67	131	5.13e-13	60.8
MS.gene003628.t1	MTR_1g063950	44.068	59	32	1	25	83	47	104	5.75e-13	60.1
MS.gene003628.t1	MTR_1g059770	40.000	65	38	1	26	90	49	112	8.47e-13	59.7
MS.gene003628.t1	MTR_2g095430	42.424	66	33	2	25	86	44	108	1.11e-12	59.3
MS.gene003628.t1	MTR_3g105900	69.444	36	11	0	25	60	1171	1206	1.18e-12	62.0
MS.gene003628.t1	MTR_1g063310	38.462	78	45	2	16	91	16	92	4.81e-12	57.0
MS.gene003628.t1	MTR_8g101520	41.538	65	37	1	27	91	51	114	5.75e-12	58.2
MS.gene003628.t1	MTR_1g063290	38.462	78	43	3	13	86	24	100	8.39e-12	56.6
MS.gene003628.t1	MTR_7g101890	39.683	63	35	2	26	86	52	113	1.05e-11	56.6
MS.gene003628.t1	MTR_8g094980	40.506	79	33	2	25	90	2	79	1.12e-11	56.2
MS.gene003628.t1	MTR_4g021810	40.845	71	39	3	17	86	18	86	1.64e-11	55.8
MS.gene003628.t1	MTR_1g063300	42.188	64	34	2	25	86	38	100	1.75e-11	55.8
MS.gene003628.t1	MTR_8g096440	39.189	74	44	1	10	83	29	101	4.46e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003628.t1	AT4G38840	73.529	68	17	1	25	91	32	99	1.24e-33	112
MS.gene003628.t1	AT5G18080	64.000	75	26	1	17	90	15	89	4.49e-33	110
MS.gene003628.t1	AT5G18020	62.963	81	25	2	10	89	12	88	1.99e-32	108
MS.gene003628.t1	AT5G18060	69.697	66	19	1	27	91	25	90	4.16e-32	107
MS.gene003628.t1	AT2G21210	51.579	95	42	2	1	91	1	95	5.90e-32	107
MS.gene003628.t1	AT5G18050	64.474	76	23	2	16	90	17	89	1.30e-31	106
MS.gene003628.t1	AT5G18010	59.211	76	30	1	17	91	15	90	3.23e-31	105
MS.gene003628.t1	AT5G18030	63.889	72	25	1	21	91	17	88	3.29e-31	105
MS.gene003628.t1	AT2G21210	51.579	95	42	2	1	91	68	162	3.82e-31	107
MS.gene003628.t1	AT4G38825	61.333	75	28	1	18	91	15	89	5.42e-31	104
MS.gene003628.t1	AT2G21200	61.111	72	27	1	20	90	15	86	1.05e-29	101
MS.gene003628.t1	AT4G34770	58.750	80	31	1	14	91	23	102	3.15e-29	100
MS.gene003628.t1	AT4G34800	50.562	89	36	2	1	86	1	84	2.39e-28	98.2
MS.gene003628.t1	AT3G03820	52.688	93	38	2	2	91	6	95	3.26e-28	98.2
MS.gene003628.t1	AT3G03840	59.722	72	27	1	22	91	23	94	1.47e-27	96.3
MS.gene003628.t1	AT4G38850	60.870	69	24	1	26	91	21	89	2.12e-27	95.9
MS.gene003628.t1	AT4G34810	57.353	68	25	1	25	88	47	114	9.91e-27	95.1
MS.gene003628.t1	AT3G03850	61.194	67	24	1	27	91	26	92	2.16e-26	93.6
MS.gene003628.t1	AT3G03830	58.571	70	26	1	25	91	23	92	1.06e-25	91.7
MS.gene003628.t1	AT4G34790	61.538	65	23	1	26	88	39	103	4.10e-25	90.5
MS.gene003628.t1	AT4G13790	47.945	73	36	1	20	90	19	91	4.78e-24	87.4
MS.gene003628.t1	AT4G38860	51.471	68	33	0	24	91	38	105	2.54e-22	83.6
MS.gene003628.t1	AT4G34780	55.072	69	28	2	26	91	28	96	2.91e-22	83.2
MS.gene003628.t1	AT4G34760	55.385	65	28	1	24	88	41	104	3.48e-22	83.2
MS.gene003628.t1	AT1G75580	55.224	67	29	1	24	90	42	107	4.54e-22	82.8
MS.gene003628.t1	AT2G21220	53.125	64	29	1	25	88	39	101	2.70e-21	80.9
MS.gene003628.t1	AT1G19830	53.731	67	30	1	24	90	46	111	3.97e-21	80.9
MS.gene003628.t1	AT2G16580	53.846	65	29	1	24	88	42	105	5.63e-20	77.4
MS.gene003628.t1	AT3G43120	50.000	72	35	1	15	86	68	138	9.89e-20	78.2
MS.gene003628.t1	AT4G36110	51.562	64	30	1	25	88	39	101	8.45e-19	74.3
MS.gene003628.t1	AT2G18010	51.562	64	30	1	25	88	47	109	1.54e-18	73.9
MS.gene003628.t1	AT5G20810	48.000	75	38	1	16	90	69	142	4.13e-18	74.3
MS.gene003628.t1	AT5G66260	54.545	66	29	1	26	91	34	98	4.59e-18	72.4
MS.gene003628.t1	AT5G20810	48.000	75	38	1	16	90	69	142	8.50e-18	73.9
MS.gene003628.t1	AT3G20220	50.769	65	30	2	26	89	47	110	5.47e-17	70.1
MS.gene003628.t1	AT2G45210	44.118	68	34	2	26	90	79	145	4.88e-16	68.9
MS.gene003628.t1	AT4G12410	47.059	68	32	2	26	90	76	142	8.95e-16	68.2
MS.gene003628.t1	AT3G51200	45.679	81	42	2	7	86	20	99	1.45e-15	66.2
MS.gene003628.t1	AT2G46690	42.857	77	40	2	18	91	16	91	2.35e-15	66.2
MS.gene003628.t1	AT1G75590	50.000	60	29	1	25	84	41	99	4.59e-15	66.2
MS.gene003628.t1	AT4G00880	50.000	72	30	3	25	91	27	97	9.71e-15	64.7
MS.gene003628.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.03e-14	65.1
MS.gene003628.t1	AT4G34750	43.750	64	35	1	25	88	36	98	1.03e-14	65.1
MS.gene003628.t1	AT3G60690	42.647	68	35	2	26	90	88	154	1.62e-14	65.1
MS.gene003628.t1	AT5G10990	48.333	60	30	1	25	84	40	98	1.99e-14	64.3
MS.gene003628.t1	AT2G37030	44.444	63	34	1	25	87	48	109	3.23e-14	63.2
MS.gene003628.t1	AT5G53590	40.278	72	37	2	25	91	45	115	3.42e-14	63.5
MS.gene003628.t1	AT4G22620	44.118	68	34	2	26	90	79	145	3.79e-14	63.9
MS.gene003628.t1	AT1G19840	50.000	60	29	1	25	84	40	98	3.80e-14	63.9
MS.gene003628.t1	AT3G61900	37.895	95	53	3	2	91	4	97	3.94e-14	63.5
MS.gene003628.t1	AT3G12830	47.222	72	33	2	15	86	43	109	4.03e-14	63.2
MS.gene003628.t1	AT4G31320	40.964	83	42	2	8	90	68	143	1.53e-13	62.8
MS.gene003628.t1	AT1G56150	47.541	61	31	1	26	86	38	97	3.44e-13	60.5
MS.gene003628.t1	AT3G53250	42.857	63	32	1	25	87	51	109	6.71e-13	60.1
MS.gene003628.t1	AT3G53250	42.857	63	32	1	25	87	82	140	9.07e-13	60.5
MS.gene003628.t1	AT2G24400	40.964	83	42	2	8	90	52	127	1.09e-12	60.5
MS.gene003628.t1	AT4G09530	38.356	73	42	2	17	86	19	91	1.50e-12	58.5
MS.gene003628.t1	AT1G16510	43.077	65	36	1	26	90	54	117	3.37e-12	58.5
MS.gene003628.t1	AT3G03847	58.000	50	19	2	34	83	80	127	7.77e-12	57.4
MS.gene003628.t1	AT3G09870	42.188	64	34	2	25	86	44	106	8.18e-12	57.0

Find 23 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATGCGAGAAGTAAGGTTT+TGG	0.309226	4.1:-31073598	None:intergenic
AATCAATCTGAAGAAGAATA+TGG	0.345307	4.1:+31073524	MS.gene003628:CDS
TTTAGTAATTCTTGAAATGA+AGG	0.399772	4.1:-31073503	None:intergenic
CTCAATTCATGCGAGAAGTA+AGG	0.432049	4.1:-31073604	None:intergenic
TAGACTGCAAGATAGCCTTT+TGG	0.442040	4.1:-31073428	None:intergenic
GTAATTCTTGAAATGAAGGT+TGG	0.498263	4.1:-31073499	None:intergenic
AGGTTGGTTCAAGTATGATA+CGG	0.535670	4.1:-31073483	None:intergenic
GGCTATCTTGCAGTCTACGT+TGG	0.536328	4.1:+31073434	MS.gene003628:CDS
GGTTGGTTCAAGTATGATAC+GGG	0.557040	4.1:-31073482	None:intergenic
TATGGATATGATCATCCAAT+GGG	0.562206	4.1:+31073542	MS.gene003628:CDS
AAGGGATTCGAAGTCCCAAA+AGG	0.563694	4.1:+31073413	MS.gene003628:CDS
CTCAACACAAGCATCTAGCA+AGG	0.576789	4.1:+31073394	MS.gene003628:CDS
TGGAATTCATCCTCACTGCA+CGG	0.583395	4.1:-31073578	None:intergenic
ATATGGATATGATCATCCAA+TGG	0.588549	4.1:+31073541	MS.gene003628:CDS
TTCTGATAAGCTTTGCTATG+CGG	0.610874	4.1:-31073358	None:intergenic
CTTGCTAGATGCTTGTGTTG+AGG	0.618806	4.1:-31073393	None:intergenic
TCTACGTTGGAGATCAAATG+AGG	0.626265	4.1:+31073447	MS.gene003628:CDS
GGAATTGTAAGACCACCCAT+TGG	0.626538	4.1:-31073557	None:intergenic
GCTTGTGTTGAGGAAAATGA+TGG	0.641773	4.1:-31073383	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.655640	4.1:+31073545	MS.gene003628:CDS
TCAACACAAGCATCTAGCAA+GGG	0.660224	4.1:+31073395	MS.gene003628:CDS
ACGTTGGAGATCAAATGAGG+CGG	0.704375	4.1:+31073450	MS.gene003628:CDS
TCTTACAATTCCGTGCAGTG+AGG	0.737351	4.1:+31073568	MS.gene003628:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTAGTAATTCTTGAAATGA+AGG	-	chr4.1:31073506-31073525	None:intergenic	20.0%
!	AATCAATCTGAAGAAGAATA+TGG	+	chr4.1:31073524-31073543	MS.gene003628:CDS	25.0%
	ATATGGATATGATCATCCAA+TGG	+	chr4.1:31073541-31073560	MS.gene003628:CDS	30.0%
	GTAATTCTTGAAATGAAGGT+TGG	-	chr4.1:31073502-31073521	None:intergenic	30.0%
	TATGGATATGATCATCCAAT+GGG	+	chr4.1:31073542-31073561	MS.gene003628:CDS	30.0%
!	AGGTTGGTTCAAGTATGATA+CGG	-	chr4.1:31073486-31073505	None:intergenic	35.0%
!	TTCTGATAAGCTTTGCTATG+CGG	-	chr4.1:31073361-31073380	None:intergenic	35.0%
	GCTTGTGTTGAGGAAAATGA+TGG	-	chr4.1:31073386-31073405	None:intergenic	40.0%
	TCAACACAAGCATCTAGCAA+GGG	+	chr4.1:31073395-31073414	MS.gene003628:CDS	40.0%
	TCTACGTTGGAGATCAAATG+AGG	+	chr4.1:31073447-31073466	MS.gene003628:CDS	40.0%
!	AGACTGCAAGATAGCCTTTT+GGG	-	chr4.1:31073430-31073449	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+GGG	-	chr4.1:31073485-31073504	None:intergenic	40.0%
!	TAGACTGCAAGATAGCCTTT+TGG	-	chr4.1:31073431-31073450	None:intergenic	40.0%
!	TCATGCGAGAAGTAAGGTTT+TGG	-	chr4.1:31073601-31073620	None:intergenic	40.0%
	AAGGGATTCGAAGTCCCAAA+AGG	+	chr4.1:31073413-31073432	MS.gene003628:CDS	45.0%
	ACGTTGGAGATCAAATGAGG+CGG	+	chr4.1:31073450-31073469	MS.gene003628:CDS	45.0%
	CTCAACACAAGCATCTAGCA+AGG	+	chr4.1:31073394-31073413	MS.gene003628:CDS	45.0%
	CTTGCTAGATGCTTGTGTTG+AGG	-	chr4.1:31073396-31073415	None:intergenic	45.0%
	GGAATTGTAAGACCACCCAT+TGG	-	chr4.1:31073560-31073579	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.1:31073545-31073564	MS.gene003628:CDS	45.0%
	TCTTACAATTCCGTGCAGTG+AGG	+	chr4.1:31073568-31073587	MS.gene003628:CDS	45.0%
	TGGAATTCATCCTCACTGCA+CGG	-	chr4.1:31073581-31073600	None:intergenic	45.0%
	GGCTATCTTGCAGTCTACGT+TGG	+	chr4.1:31073434-31073453	MS.gene003628:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	31073350	31073625	31073350	ID=MS.gene003628
chr4.1	mRNA	31073350	31073625	31073350	ID=MS.gene003628.t1;Parent=MS.gene003628
chr4.1	exon	31073350	31073625	31073350	ID=MS.gene003628.t1.exon1;Parent=MS.gene003628.t1
chr4.1	CDS	31073350	31073625	31073350	ID=cds.MS.gene003628.t1;Parent=MS.gene003628.t1

Gene Sequence	>MS.gene003628 ATGGGTTTCCGCATAGCAAAGCTTATCAGAATGCCATCATTTTCCTCAACACAAGCATCTAGCAAGGGATTCGAAGTCCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATCAAATGAGGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCTTCATTTCAAGAATTACTAAATCAATCTGAAGAAGAATATGGATATGATCATCCAATGGGTGGTCTTACAATTCCGTGCAGTGAGGATGAATTCCAAAACCTTACTTCTCGCATGAATTGA
Protein sequence	>MS.gene003628.t1 MGFRIAKLIRMPSFSSTQASSKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPSFQELLNQSEEEYGYDHPMGGLTIPCSEDEFQNLTSRMN