AlfalfaGEDB | MS.gene022358

M. sativa cultivar XinJiangDaYe / MS.gene022358

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022358.t1	XP_003607121.1	95.7	92	4	0	1	92	1	92	6.50E-43	183

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022358.t1	P33083	75.6	90	22	0	1	90	1	90	4.7e-34	144.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022358.t1	G7JL43	95.7	92	4	0	1	92	1	92	4.7e-43	183.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene022358	MS.gene062974	PPI
MS.gene40326	MS.gene022358	PPI
MS.gene062952	MS.gene022358	PPI
MS.gene022358	MS.gene003583	PPI
MS.gene022358	MS.gene062951	PPI
MS.gene022358	MS.gene057801	PPI
MS.gene022358	MS.gene77527	PPI
MS.gene022358	MS.gene77524	PPI
MS.gene022358	MS.gene68162	PPI
MS.gene031199	MS.gene022358	PPI
MS.gene022358	MS.gene045363	PPI
MS.gene022358	MS.gene75675	PPI
MS.gene50676	MS.gene022358	PPI
MS.gene23370	MS.gene022358	PPI
MS.gene50766	MS.gene022358	PPI
MS.gene77529	MS.gene022358	PPI
MS.gene014667	MS.gene022358	PPI
MS.gene022358	MS.gene79887	PPI
MS.gene003594	MS.gene022358	PPI
MS.gene50665	MS.gene022358	PPI
MS.gene022358	MS.gene50652	PPI
MS.gene50677	MS.gene022358	PPI
MS.gene022358	MS.gene002380	PPI
MS.gene003586	MS.gene022358	PPI
MS.gene062988	MS.gene022358	PPI
MS.gene75673	MS.gene022358	PPI
MS.gene062963	MS.gene022358	PPI
MS.gene022358	MS.gene50684	PPI
MS.gene50763	MS.gene022358	PPI
MS.gene022358	MS.gene014668	PPI
MS.gene031200	MS.gene022358	PPI
MS.gene045365	MS.gene022358	PPI
MS.gene022358	MS.gene50765	PPI
MS.gene23372	MS.gene022358	PPI
MS.gene022358	MS.gene68759	PPI
MS.gene50659	MS.gene022358	PPI
MS.gene75316	MS.gene022358	PPI
MS.gene057790	MS.gene022358	PPI
MS.gene003624	MS.gene022358	PPI
MS.gene022358	MS.gene79891	PPI
MS.gene23371	MS.gene022358	PPI
MS.gene031201	MS.gene022358	PPI
MS.gene022358	MS.gene045367	PPI
MS.gene022358	MS.gene045364	PPI
MS.gene68761	MS.gene022358	PPI
MS.gene68760	MS.gene022358	PPI
MS.gene75676	MS.gene022358	PPI
MS.gene022358	MS.gene014669	PPI
MS.gene022358	MS.gene057808	PPI
MS.gene045362	MS.gene022358	PPI
MS.gene77523	MS.gene022358	PPI
MS.gene057778	MS.gene022358	PPI
MS.gene045366	MS.gene022358	PPI
MS.gene022358	MS.gene68163	PPI
MS.gene75674	MS.gene022358	PPI
MS.gene79890	MS.gene022358	PPI
MS.gene022358	MS.gene75315	PPI
MS.gene003615	MS.gene022358	PPI
MS.gene022358	MS.gene68164	PPI
MS.gene062973	MS.gene022358	PPI
MS.gene003602	MS.gene022358	PPI
MS.gene047517	MS.gene022358	PPI
MS.gene022358	MS.gene79889	PPI
MS.gene003627	MS.gene022358	PPI
MS.gene022358	MS.gene014222	PPI
MS.gene003577	MS.gene022358	PPI
MS.gene022358	MS.gene79888	PPI
MS.gene062984	MS.gene022358	PPI
MS.gene022358	MS.gene75678	PPI
MS.gene40327	MS.gene022358	PPI
MS.gene022358	MS.gene014223	PPI
MS.gene022358	MS.gene79885	PPI
MS.gene003587	MS.gene022358	PPI
MS.gene022358	MS.gene50764	PPI
MS.gene003590	MS.gene022358	PPI
MS.gene045368	MS.gene022358	PPI
MS.gene062943	MS.gene022358	PPI
MS.gene063112	MS.gene022358	PPI
MS.gene003608	MS.gene022358	PPI
MS.gene77526	MS.gene022358	PPI
MS.gene022358	MS.gene014670	PPI
MS.gene045360	MS.gene022358	PPI
MS.gene057818	MS.gene022358	PPI
MS.gene022358	MS.gene75314	PPI
MS.gene022358	MS.gene01764	PPI
MS.gene50687	MS.gene022358	PPI
MS.gene75677	MS.gene022358	PPI
MS.gene022358	MS.gene75679	PPI
MS.gene003625	MS.gene022358	PPI
MS.gene022358	MS.gene40325	PPI
MS.gene057795	MS.gene022358	PPI
MS.gene68165	MS.gene022358	PPI
MS.gene045361	MS.gene022358	PPI
MS.gene022358	MS.gene031198	PPI
MS.gene50675	MS.gene022358	PPI
MS.gene003591	MS.gene022358	PPI
MS.gene022358	MS.gene057797	PPI
MS.gene022358	MS.gene003614	PPI
MS.gene062979	MS.gene022358	PPI
MS.gene022358	MS.gene77528	PPI
MS.gene022358	MS.gene79886	PPI
MS.gene022358	MS.gene014671	PPI
MS.gene022358	MS.gene003596	PPI
MS.gene01358	MS.gene022358	PPI
MS.gene022358	MS.gene75672	PPI
MS.gene022358	MS.gene50654	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022358.t1	MTR_4g072480	95.652	92	4	0	1	92	1	92	1.37e-63	187
MS.gene022358.t1	MTR_4g072620	92.391	92	7	0	1	92	1	92	5.49e-62	183
MS.gene022358.t1	MTR_4g072680	94.565	92	5	0	1	92	1	92	5.80e-62	183
MS.gene022358.t1	MTR_4g072730	91.209	91	8	0	1	91	1	91	1.78e-60	179
MS.gene022358.t1	MTR_4g072460	92.391	92	7	0	1	92	1	92	2.40e-60	179
MS.gene022358.t1	MTR_4g072660	84.783	92	9	1	1	92	1	87	3.88e-54	163
MS.gene022358.t1	MTR_4g072500	82.609	92	16	0	1	92	1	92	3.84e-53	160
MS.gene022358.t1	MTR_4g072570	80.435	92	18	0	1	92	1	92	6.83e-51	155
MS.gene022358.t1	MTR_4g072530	81.111	90	17	0	1	90	1	90	1.30e-50	154
MS.gene022358.t1	MTR_4g072640	78.889	90	19	0	1	90	1	90	9.62e-50	152
MS.gene022358.t1	MTR_4g072270	73.118	93	24	1	1	92	1	93	2.82e-47	146
MS.gene022358.t1	MTR_4g072310	73.118	93	24	1	1	92	1	93	3.19e-47	145
MS.gene022358.t1	MTR_3g084150	72.826	92	25	0	1	92	1	92	4.25e-47	145
MS.gene022358.t1	MTR_4g072230	74.194	93	21	2	1	92	1	91	3.11e-46	143
MS.gene022358.t1	MTR_4g072880	70.968	93	26	1	1	92	1	93	3.64e-46	143
MS.gene022358.t1	MTR_3g084180	71.739	92	26	0	1	92	1	92	4.12e-46	143
MS.gene022358.t1	MTR_4g072860	74.194	93	23	1	1	92	1	93	4.74e-46	143
MS.gene022358.t1	MTR_8g461410	70.652	92	27	0	1	92	1	92	1.41e-45	141
MS.gene022358.t1	MTR_4g072250	74.194	93	22	2	1	92	1	92	6.54e-45	140
MS.gene022358.t1	MTR_3g084240	69.565	92	28	0	1	92	1	92	1.90e-44	139
MS.gene022358.t1	MTR_4g072240	69.231	91	27	1	1	90	1	91	3.05e-44	138
MS.gene022358.t1	MTR_3g084170	69.565	92	28	0	1	92	1	92	6.48e-44	137
MS.gene022358.t1	MTR_4g072870	69.231	91	27	1	1	90	1	91	2.37e-43	136
MS.gene022358.t1	MTR_5g008360	80.000	80	16	0	13	92	4	83	3.70e-43	135
MS.gene022358.t1	MTR_4g072220	66.667	93	30	1	1	92	1	93	7.88e-43	134
MS.gene022358.t1	MTR_3g117630	73.563	87	23	0	6	92	6	92	8.17e-43	134
MS.gene022358.t1	MTR_3g110042	73.563	87	23	0	1	87	1	87	9.75e-43	134
MS.gene022358.t1	MTR_4g072300	65.934	91	30	1	1	90	1	91	2.45e-42	133
MS.gene022358.t1	MTR_3g084220	68.478	92	29	0	1	92	1	92	4.88e-42	132
MS.gene022358.t1	MTR_4g072370	70.000	90	25	1	1	90	1	88	8.70e-42	132
MS.gene022358.t1	MTR_3g110038	67.391	92	30	0	1	92	1	92	1.27e-41	131
MS.gene022358.t1	MTR_3g084250	67.391	92	30	0	1	92	1	92	3.02e-41	130
MS.gene022358.t1	MTR_4g050700	66.667	93	30	1	1	92	1	93	6.34e-41	130
MS.gene022358.t1	MTR_2g012410	66.667	93	30	1	1	92	1	93	6.34e-41	130
MS.gene022358.t1	MTR_4g072260	64.516	93	32	1	1	92	1	93	7.64e-41	129
MS.gene022358.t1	MTR_4g072890	65.934	91	30	1	1	90	1	91	1.01e-40	129
MS.gene022358.t1	MTR_4g072490	67.778	90	24	1	1	90	1	85	1.40e-40	129
MS.gene022358.t1	MTR_4g072580	67.778	90	24	1	1	90	1	85	2.00e-40	128
MS.gene022358.t1	MTR_4g072600	68.889	90	23	1	1	90	1	85	2.52e-40	128
MS.gene022358.t1	MTR_4g072550	82.192	73	13	0	20	92	31	103	2.56e-40	129
MS.gene022358.t1	MTR_4g072630	67.778	90	25	1	1	90	1	86	2.62e-40	128
MS.gene022358.t1	MTR_4g072330	66.667	90	28	1	1	90	1	88	3.47e-40	128
MS.gene022358.t1	MTR_3g084210	67.391	92	30	0	1	92	1	92	6.36e-40	127
MS.gene022358.t1	MTR_3g110032	65.591	93	31	1	1	92	1	93	6.85e-40	127
MS.gene022358.t1	MTR_4g072740	68.889	90	23	1	1	90	1	85	7.69e-40	127
MS.gene022358.t1	MTR_5g008370	68.132	91	29	0	1	91	1	91	1.02e-39	128
MS.gene022358.t1	MTR_4g072850	69.149	94	27	1	1	92	1	94	2.33e-39	126
MS.gene022358.t1	MTR_4g072830	68.539	89	26	1	1	89	1	87	4.23e-39	125
MS.gene022358.t1	MTR_4g072470	66.667	90	25	1	1	90	1	85	1.11e-38	124
MS.gene022358.t1	MTR_3g084190	67.391	92	30	0	1	92	1	92	1.11e-38	124
MS.gene022358.t1	MTR_3g084260	63.441	93	33	1	1	92	1	93	2.31e-38	123
MS.gene022358.t1	MTR_4g072540	68.889	90	24	1	1	90	1	86	3.89e-38	122
MS.gene022358.t1	MTR_8g461420	66.667	90	30	0	1	90	1	90	4.39e-38	122
MS.gene022358.t1	MTR_3g084230	66.667	90	30	0	1	90	1	90	1.47e-37	121
MS.gene022358.t1	MTR_4g072465	62.222	90	30	1	1	90	1	86	2.68e-37	120
MS.gene022358.t1	MTR_3g084160	66.304	92	31	0	1	92	1	92	4.39e-37	120
MS.gene022358.t1	MTR_4g072610	65.556	90	25	1	1	90	1	84	7.04e-37	119
MS.gene022358.t1	MTR_4g072720	66.667	90	26	1	1	90	1	86	5.84e-36	117
MS.gene022358.t1	MTR_4g072590	66.667	90	25	1	1	90	1	85	7.31e-36	117
MS.gene022358.t1	MTR_4g072820	64.835	91	25	2	1	90	1	85	7.86e-36	117
MS.gene022358.t1	MTR_3g110045	66.667	90	30	0	3	92	62	151	9.00e-36	119
MS.gene022358.t1	MTR_4g072380	63.736	91	27	2	1	90	1	86	9.95e-36	117
MS.gene022358.t1	MTR_4g072670	66.667	90	26	1	1	90	1	86	1.15e-35	116
MS.gene022358.t1	MTR_4g072940	66.304	92	29	1	3	92	33	124	1.84e-35	117
MS.gene022358.t1	MTR_4g072510	66.667	90	26	1	1	90	1	86	4.35e-35	115
MS.gene022358.t1	MTR_4g072650	62.222	90	28	1	1	90	1	84	3.03e-34	113
MS.gene022358.t1	MTR_4g072290	59.140	93	23	2	1	92	1	79	1.04e-32	108
MS.gene022358.t1	MTR_5g008350	64.557	79	23	1	1	79	1	74	1.62e-32	108
MS.gene022358.t1	MTR_4g072690	65.556	90	26	1	1	90	1	85	3.62e-32	107
MS.gene022358.t1	MTR_4g072450	62.222	90	29	1	1	90	1	85	2.43e-30	103
MS.gene022358.t1	MTR_4g072750	67.568	74	22	1	1	72	1	74	2.43e-30	103
MS.gene022358.t1	MTR_4g072770	57.778	90	28	1	1	90	1	80	2.89e-30	102
MS.gene022358.t1	MTR_4g072910	57.831	83	34	1	9	90	18	100	5.81e-30	102
MS.gene022358.t1	MTR_4g072560	57.143	84	35	1	8	90	15	98	6.91e-30	102
MS.gene022358.t1	MTR_4g072980	52.688	93	38	2	1	92	8	95	2.25e-29	100
MS.gene022358.t1	MTR_3g084200	61.111	72	28	0	1	72	1	72	7.93e-29	99.8
MS.gene022358.t1	MTR_3g117640	69.118	68	20	1	25	91	34	101	1.04e-28	99.8
MS.gene022358.t1	MTR_3g110035	65.672	67	23	0	26	92	72	138	1.86e-27	97.4
MS.gene022358.t1	MTR_4g072280	57.333	75	31	1	1	74	1	75	3.84e-26	92.4
MS.gene022358.t1	MTR_6g077850	55.224	67	30	0	24	90	33	99	1.89e-25	91.3
MS.gene022358.t1	MTR_3g113310	58.209	67	27	1	23	89	40	105	5.46e-25	90.1
MS.gene022358.t1	MTR_3g117610	59.701	67	26	1	23	89	43	108	4.83e-24	87.8
MS.gene022358.t1	MTR_4g072190	57.971	69	28	1	21	89	32	99	8.20e-24	87.0
MS.gene022358.t1	MTR_8g461400	47.826	92	22	1	1	92	1	66	5.43e-21	79.0
MS.gene022358.t1	MTR_4g072930	55.882	68	26	1	27	90	43	110	1.66e-20	79.0
MS.gene022358.t1	MTR_8g076040	54.545	66	29	1	24	89	40	104	2.49e-20	78.6
MS.gene022358.t1	MTR_5g021820	51.515	66	31	1	24	89	39	103	5.08e-20	77.4
MS.gene022358.t1	MTR_4g124750	43.182	88	47	2	4	89	46	132	9.72e-19	75.9
MS.gene022358.t1	MTR_2g043960	46.575	73	38	1	17	89	68	139	4.01e-18	74.3
MS.gene022358.t1	MTR_4g072840	43.956	91	19	3	1	90	1	60	8.67e-17	68.2
MS.gene022358.t1	MTR_8g461210	40.698	86	50	1	4	89	14	98	6.85e-16	67.4
MS.gene022358.t1	MTR_4g005310	46.970	66	34	1	21	85	58	123	1.64e-15	67.4
MS.gene022358.t1	MTR_1g024085	45.783	83	41	2	4	83	13	94	2.61e-15	66.6
MS.gene022358.t1	MTR_1g009150	52.459	61	28	1	25	85	71	130	7.10e-15	66.2
MS.gene022358.t1	MTR_0388s0020	41.975	81	43	2	12	89	62	141	1.45e-14	64.7
MS.gene022358.t1	MTR_3g109160	43.750	80	44	1	12	91	56	134	1.69e-14	65.1
MS.gene022358.t1	MTR_7g118010	48.529	68	32	2	25	90	23	89	2.85e-14	62.8
MS.gene022358.t1	MTR_4g072160	49.296	71	33	2	16	85	28	96	5.44e-14	63.2
MS.gene022358.t1	MTR_1g094750	48.387	62	31	1	24	85	49	109	9.15e-14	62.0
MS.gene022358.t1	MTR_4g025830	46.970	66	31	2	25	87	79	143	1.15e-13	62.8
MS.gene022358.t1	MTR_4g005320	47.541	61	31	1	25	85	70	129	1.90e-13	62.4
MS.gene022358.t1	MTR_1g061570	45.588	68	36	1	24	91	18	84	2.54e-13	60.8
MS.gene022358.t1	MTR_3g092220	42.857	70	37	2	16	83	24	92	2.63e-13	60.8
MS.gene022358.t1	MTR_8g026730	45.588	68	34	2	25	90	27	93	2.94e-13	60.5
MS.gene022358.t1	MTR_2g066830	39.506	81	48	1	10	90	43	122	6.01e-13	60.5
MS.gene022358.t1	MTR_3g097120	40.541	74	35	2	20	85	4	76	3.18e-12	57.8
MS.gene022358.t1	MTR_1g059770	43.284	67	34	2	28	91	52	117	5.34e-12	57.8
MS.gene022358.t1	MTR_1g063950	36.000	75	47	1	14	88	37	110	1.09e-11	56.6
MS.gene022358.t1	MTR_4g021810	48.387	62	30	2	25	85	26	86	1.64e-11	55.8
MS.gene022358.t1	MTR_8g101520	38.636	88	49	2	7	90	28	114	2.20e-11	56.6
MS.gene022358.t1	MTR_7g104940	36.620	71	44	1	19	89	44	113	3.31e-11	55.8
MS.gene022358.t1	MTR_7g104950	36.000	75	46	2	16	89	40	113	3.49e-11	55.5
MS.gene022358.t1	MTR_1g063310	35.955	89	52	3	5	90	6	92	5.50e-11	54.3
MS.gene022358.t1	MTR_7g101740	42.188	64	36	1	24	87	39	101	6.07e-11	54.7
MS.gene022358.t1	MTR_3g098970	33.333	78	51	1	15	92	43	119	6.15e-11	55.5
MS.gene022358.t1	MTR_7g405740	44.068	59	32	1	27	85	69	126	7.72e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022358.t1	AT4G34770	58.889	90	35	1	4	91	14	103	6.12e-32	107
MS.gene022358.t1	AT4G38840	56.566	99	34	3	1	90	1	99	1.05e-31	107
MS.gene022358.t1	AT2G21200	60.000	85	32	2	7	89	2	86	3.94e-31	105
MS.gene022358.t1	AT3G03840	57.143	91	34	2	3	91	8	95	1.41e-29	101
MS.gene022358.t1	AT5G18020	54.545	88	38	2	1	87	1	87	1.55e-29	101
MS.gene022358.t1	AT2G21210	51.579	95	41	2	1	90	1	95	1.65e-29	101
MS.gene022358.t1	AT5G18060	53.933	89	36	2	7	90	2	90	2.23e-29	100
MS.gene022358.t1	AT4G38825	55.172	87	35	2	8	90	3	89	2.55e-29	100
MS.gene022358.t1	AT5G18080	54.945	91	39	2	1	90	1	90	2.68e-29	100
MS.gene022358.t1	AT2G21210	51.579	95	41	2	1	90	68	162	7.62e-29	101
MS.gene022358.t1	AT3G03820	58.427	89	31	2	6	91	11	96	1.05e-28	99.4
MS.gene022358.t1	AT5G18030	54.023	87	37	2	7	90	2	88	1.56e-28	98.6
MS.gene022358.t1	AT3G03850	60.440	91	29	3	3	91	8	93	1.80e-28	98.6
MS.gene022358.t1	AT4G34800	54.118	85	32	2	1	82	1	81	2.49e-28	98.2
MS.gene022358.t1	AT5G18050	52.809	89	37	2	7	90	2	90	2.74e-28	98.2
MS.gene022358.t1	AT4G38850	57.647	85	32	2	7	87	2	86	6.39e-28	97.1
MS.gene022358.t1	AT5G18010	51.648	91	42	2	1	90	1	90	2.58e-27	95.5
MS.gene022358.t1	AT4G34810	66.129	62	17	1	25	82	48	109	4.17e-26	93.6
MS.gene022358.t1	AT4G13790	49.438	89	43	1	1	87	1	89	8.87e-26	92.0
MS.gene022358.t1	AT3G03830	54.545	88	31	2	3	87	8	89	4.02e-25	90.1
MS.gene022358.t1	AT4G34780	60.563	71	25	1	23	90	26	96	9.79e-24	87.0
MS.gene022358.t1	AT4G38860	57.353	68	29	0	23	90	38	105	3.17e-23	85.9
MS.gene022358.t1	AT2G21220	58.209	67	27	1	23	89	38	103	4.83e-23	85.1
MS.gene022358.t1	AT4G34790	60.000	65	24	1	25	87	39	103	6.69e-23	85.1
MS.gene022358.t1	AT4G34760	58.209	67	27	1	23	89	41	106	6.95e-23	85.1
MS.gene022358.t1	AT1G75580	61.194	67	25	1	23	89	42	107	7.30e-23	85.1
MS.gene022358.t1	AT2G16580	55.385	65	28	1	23	87	42	105	2.00e-19	76.3
MS.gene022358.t1	AT1G19830	56.338	71	29	2	20	89	43	112	2.85e-19	76.3
MS.gene022358.t1	AT4G36110	54.688	64	28	1	24	87	39	101	8.58e-19	74.3
MS.gene022358.t1	AT3G43120	43.590	78	43	1	14	91	68	144	1.24e-18	75.5
MS.gene022358.t1	AT2G18010	53.125	64	29	1	24	87	47	109	6.28e-18	72.4
MS.gene022358.t1	AT5G20810	46.575	73	38	1	17	89	71	142	1.48e-17	72.8
MS.gene022358.t1	AT5G20810	46.575	73	38	1	17	89	71	142	1.80e-17	73.2
MS.gene022358.t1	AT3G20220	47.368	76	34	3	11	85	37	107	9.67e-17	69.7
MS.gene022358.t1	AT5G66260	50.000	66	32	1	25	90	34	98	2.48e-16	68.2
MS.gene022358.t1	AT3G12830	43.678	87	47	2	4	90	30	114	7.13e-16	67.8
MS.gene022358.t1	AT1G75590	48.235	85	38	3	4	83	16	99	3.27e-15	66.6
MS.gene022358.t1	AT3G51200	49.123	57	28	1	26	82	41	96	7.05e-15	64.7
MS.gene022358.t1	AT5G10990	53.333	60	27	1	24	83	40	98	1.74e-14	64.7
MS.gene022358.t1	AT2G46690	40.506	79	43	2	16	91	15	92	4.01e-14	63.2
MS.gene022358.t1	AT1G19840	46.429	84	40	2	4	83	16	98	4.53e-14	63.5
MS.gene022358.t1	AT5G53590	45.833	72	33	2	24	90	45	115	6.76e-14	62.8
MS.gene022358.t1	AT3G61900	45.714	70	34	2	24	90	29	97	1.28e-13	62.0
MS.gene022358.t1	AT4G34750	46.875	64	33	1	24	87	36	98	2.72e-13	61.6
MS.gene022358.t1	AT4G34750	46.875	64	33	1	24	87	36	98	2.72e-13	61.6
MS.gene022358.t1	AT3G03847	42.857	77	41	3	7	82	53	127	3.37e-13	60.8
MS.gene022358.t1	AT3G60690	44.286	70	35	2	21	87	84	152	3.53e-13	61.6
MS.gene022358.t1	AT3G09870	48.438	64	30	2	24	85	44	106	5.33e-13	60.1
MS.gene022358.t1	AT2G45210	40.845	71	38	2	20	87	74	143	7.75e-13	60.5
MS.gene022358.t1	AT2G37030	41.538	65	37	1	24	88	48	111	3.39e-12	58.2
MS.gene022358.t1	AT1G56150	42.529	87	45	3	7	90	18	102	5.43e-12	57.4
MS.gene022358.t1	AT4G00880	44.928	69	35	2	24	90	27	94	7.36e-12	57.4
MS.gene022358.t1	AT4G09530	41.176	68	37	2	27	91	30	97	9.58e-12	56.6
MS.gene022358.t1	AT4G31320	45.902	61	32	1	25	85	80	139	1.81e-11	57.4
MS.gene022358.t1	AT1G16510	44.615	65	35	1	25	89	54	117	1.95e-11	56.6
MS.gene022358.t1	AT2G24400	47.541	61	31	1	25	85	64	123	3.30e-11	56.6

Find 25 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATATAACTTCTTGTTTGAA+TGG	0.306291	3.1:+63213612	MS.gene022358:CDS
CTCTTAGAATAGAGTTTAAA+CGG	0.400936	3.1:-63213371	None:intergenic
CGTTTAAACTCTATTCTAAG+AGG	0.413979	3.1:+63213372	MS.gene022358:CDS
CGTGTATGTTGGAGAGAAAC+TGG	0.417120	3.1:+63213455	MS.gene022358:CDS
ATATAACTTCTTGTTTGAAT+GGG	0.439319	3.1:+63213613	MS.gene022358:CDS
AAAATCTGTAGAAGTGAGAA+AGG	0.471464	3.1:+63213422	MS.gene022358:CDS
TGGCCTCACCATTCCTTGTA+CGG	0.513391	3.1:+63213575	MS.gene022358:CDS
TCAAACAAGAAGTTATATGT+TGG	0.515644	3.1:-63213608	None:intergenic
AATCAAGCTGAGGAAGAGTT+CGG	0.521043	3.1:+63213534	MS.gene022358:CDS
TTCAACAAGTCTTGAAATGA+CGG	0.525736	3.1:-63213513	None:intergenic
TGGAAGACATCTTCCGTACA+AGG	0.532292	3.1:-63213588	None:intergenic
TTCGGATATGATCATCCAAT+GGG	0.535679	3.1:+63213552	MS.gene022358:CDS
GACATCTTCCGTACAAGGAA+TGG	0.540589	3.1:-63213583	None:intergenic
ACAAGTCTTGAAATGACGGT+TGG	0.545318	3.1:-63213509	None:intergenic
AAACTCTATTCTAAGAGGAT+CGG	0.556160	3.1:+63213377	MS.gene022358:CDS
GGATATGTTGCCGTGTATGT+TGG	0.558225	3.1:+63213444	MS.gene022358:CDS
GTTCGGATATGATCATCCAA+TGG	0.566860	3.1:+63213551	MS.gene022358:CDS
GGAATGGTGAGGCCACCCAT+TGG	0.574145	3.1:-63213567	None:intergenic
GGTTGGTTCAAGTATGAGAC+AGG	0.576079	3.1:-63213492	None:intergenic
AAATCTGTAGAAGTGAGAAA+GGG	0.578349	3.1:+63213423	MS.gene022358:CDS
CAGTTTCTCTCCAACATACA+CGG	0.594831	3.1:-63213454	None:intergenic
AGACTTGTTGAATCAAGCTG+AGG	0.621044	3.1:+63213524	MS.gene022358:CDS
GGATATGATCATCCAATGGG+TGG	0.661502	3.1:+63213555	MS.gene022358:CDS
CTTCCGTACAAGGAATGGTG+AGG	0.686019	3.1:-63213578	None:intergenic
ATGTTGGAGAGAAACTGGCG+CGG	0.774668	3.1:+63213460	MS.gene022358:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATAACTTCTTGTTTGAAT+GGG	+	chr3.1:63213613-63213632	MS.gene022358:CDS	20.0%
!	CTCTTAGAATAGAGTTTAAA+CGG	-	chr3.1:63213374-63213393	None:intergenic	25.0%
!	TCAAACAAGAAGTTATATGT+TGG	-	chr3.1:63213611-63213630	None:intergenic	25.0%
!!	CATATAACTTCTTGTTTGAA+TGG	+	chr3.1:63213612-63213631	MS.gene022358:CDS	25.0%
	AAAATCTGTAGAAGTGAGAA+AGG	+	chr3.1:63213422-63213441	MS.gene022358:CDS	30.0%
	AAATCTGTAGAAGTGAGAAA+GGG	+	chr3.1:63213423-63213442	MS.gene022358:CDS	30.0%
	CGTTTAAACTCTATTCTAAG+AGG	+	chr3.1:63213372-63213391	MS.gene022358:CDS	30.0%
	TTCAACAAGTCTTGAAATGA+CGG	-	chr3.1:63213516-63213535	None:intergenic	30.0%
!	AAACTCTATTCTAAGAGGAT+CGG	+	chr3.1:63213377-63213396	MS.gene022358:CDS	30.0%
	TTCGGATATGATCATCCAAT+GGG	+	chr3.1:63213552-63213571	MS.gene022358:CDS	35.0%
	AATCAAGCTGAGGAAGAGTT+CGG	+	chr3.1:63213534-63213553	MS.gene022358:CDS	40.0%
	ACAAGTCTTGAAATGACGGT+TGG	-	chr3.1:63213512-63213531	None:intergenic	40.0%
	CAGTTTCTCTCCAACATACA+CGG	-	chr3.1:63213457-63213476	None:intergenic	40.0%
	GTTCGGATATGATCATCCAA+TGG	+	chr3.1:63213551-63213570	MS.gene022358:CDS	40.0%
!!	AGACTTGTTGAATCAAGCTG+AGG	+	chr3.1:63213524-63213543	MS.gene022358:CDS	40.0%
	CGTGTATGTTGGAGAGAAAC+TGG	+	chr3.1:63213455-63213474	MS.gene022358:CDS	45.0%
	GACATCTTCCGTACAAGGAA+TGG	-	chr3.1:63213586-63213605	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	+	chr3.1:63213555-63213574	MS.gene022358:CDS	45.0%
	GGATATGTTGCCGTGTATGT+TGG	+	chr3.1:63213444-63213463	MS.gene022358:CDS	45.0%
	TGGAAGACATCTTCCGTACA+AGG	-	chr3.1:63213591-63213610	None:intergenic	45.0%
!	GGTTGGTTCAAGTATGAGAC+AGG	-	chr3.1:63213495-63213514	None:intergenic	45.0%
	ATGTTGGAGAGAAACTGGCG+CGG	+	chr3.1:63213460-63213479	MS.gene022358:CDS	50.0%
	CTTCCGTACAAGGAATGGTG+AGG	-	chr3.1:63213581-63213600	None:intergenic	50.0%
	TGGCCTCACCATTCCTTGTA+CGG	+	chr3.1:63213575-63213594	MS.gene022358:CDS	50.0%
	GGAATGGTGAGGCCACCCAT+TGG	-	chr3.1:63213570-63213589	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	63213363	63213641	63213363	ID=MS.gene022358
chr3.1	mRNA	63213363	63213641	63213363	ID=MS.gene022358.t1;Parent=MS.gene022358
chr3.1	exon	63213363	63213641	63213363	ID=MS.gene022358.t1.exon1;Parent=MS.gene022358.t1
chr3.1	CDS	63213363	63213641	63213363	ID=cds.MS.gene022358.t1;Parent=MS.gene022358.t1

Gene Sequence	>MS.gene022358 ATGGGTTTCCGTTTAAACTCTATTCTAAGAGGATCGGTAACAGCTAGACAAGCAACATCAAAATCTGTAGAAGTGAGAAAGGGATATGTTGCCGTGTATGTTGGAGAGAAACTGGCGCGGTTTGTAGTTCCTGTCTCATACTTGAACCAACCGTCATTTCAAGACTTGTTGAATCAAGCTGAGGAAGAGTTCGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGTACGGAAGATGTCTTCCAACATATAACTTCTTGTTTGAATGGGCTATGA
Protein sequence	>MS.gene022358.t1 MGFRLNSILRGSVTARQATSKSVEVRKGYVAVYVGEKLARFVVPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCTEDVFQHITSCLNGL