Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030674.t1 | O82515.1 | 100 | 288 | 0 | 0 | 6 | 293 | 72 | 359 | 1.20E-162 | 582.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030674.t1 | O82515 | 100.0 | 288 | 0 | 0 | 6 | 293 | 72 | 359 | 2.8e-165 | 582.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030674.t1 | Q53X16 | 100.0 | 288 | 0 | 0 | 6 | 293 | 72 | 359 | 8.4e-163 | 582.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030674.t1 | MTR_8g092630 | 97.569 | 288 | 7 | 0 | 6 | 293 | 129 | 416 | 0.0 | 576 |
| MS.gene030674.t1 | MTR_5g031230 | 64.685 | 286 | 100 | 1 | 6 | 290 | 72 | 357 | 4.85e-130 | 374 |
| MS.gene030674.t1 | MTR_4g115300 | 65.035 | 286 | 99 | 1 | 6 | 290 | 72 | 357 | 1.38e-129 | 373 |
| MS.gene030674.t1 | MTR_5g031190 | 64.236 | 288 | 102 | 1 | 6 | 292 | 72 | 359 | 3.63e-126 | 364 |
| MS.gene030674.t1 | MTR_5g031310 | 61.888 | 286 | 108 | 1 | 6 | 290 | 73 | 358 | 4.01e-126 | 364 |
| MS.gene030674.t1 | MTR_5g031390 | 62.847 | 288 | 106 | 1 | 6 | 292 | 72 | 359 | 5.15e-126 | 363 |
| MS.gene030674.t1 | MTR_5g031360 | 62.238 | 286 | 107 | 1 | 6 | 290 | 74 | 359 | 1.81e-123 | 357 |
| MS.gene030674.t1 | MTR_5g031250 | 62.587 | 286 | 106 | 1 | 6 | 290 | 72 | 357 | 3.76e-123 | 356 |
| MS.gene030674.t1 | MTR_5g031305 | 61.538 | 286 | 109 | 1 | 6 | 290 | 73 | 358 | 7.49e-123 | 355 |
| MS.gene030674.t1 | MTR_8g068190 | 64.236 | 288 | 102 | 1 | 6 | 292 | 72 | 359 | 2.35e-120 | 349 |
| MS.gene030674.t1 | MTR_5g031300 | 56.993 | 286 | 122 | 1 | 6 | 290 | 73 | 358 | 2.99e-119 | 347 |
| MS.gene030674.t1 | MTR_5g031210 | 62.238 | 286 | 107 | 1 | 6 | 290 | 72 | 357 | 5.11e-119 | 346 |
| MS.gene030674.t1 | MTR_5g031180 | 63.194 | 288 | 105 | 1 | 6 | 292 | 72 | 359 | 1.56e-113 | 332 |
| MS.gene030674.t1 | MTR_1g025950 | 59.441 | 286 | 114 | 2 | 6 | 289 | 71 | 356 | 8.19e-109 | 320 |
| MS.gene030674.t1 | MTR_5g031430 | 58.042 | 286 | 119 | 1 | 6 | 290 | 72 | 357 | 3.91e-104 | 308 |
| MS.gene030674.t1 | MTR_2g009810 | 54.355 | 287 | 128 | 3 | 6 | 290 | 120 | 405 | 4.09e-93 | 281 |
| MS.gene030674.t1 | MTR_1g107425 | 48.421 | 285 | 146 | 1 | 6 | 289 | 70 | 354 | 2.48e-87 | 265 |
| MS.gene030674.t1 | MTR_5g031250 | 60.588 | 170 | 66 | 1 | 6 | 174 | 72 | 241 | 2.30e-65 | 206 |
| MS.gene030674.t1 | MTR_2g009820 | 50.607 | 247 | 115 | 4 | 50 | 290 | 8 | 253 | 1.81e-64 | 203 |
| MS.gene030674.t1 | MTR_1g107425 | 48.869 | 221 | 111 | 2 | 6 | 225 | 70 | 289 | 1.20e-63 | 202 |
| MS.gene030674.t1 | MTR_5g031290 | 64.602 | 113 | 40 | 0 | 180 | 292 | 80 | 192 | 6.42e-48 | 159 |
| MS.gene030674.t1 | MTR_8g095220 | 25.957 | 235 | 144 | 9 | 6 | 212 | 112 | 344 | 6.97e-13 | 68.9 |
| MS.gene030674.t1 | MTR_8g095220 | 26.702 | 191 | 113 | 7 | 6 | 171 | 112 | 300 | 2.32e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030674.t1 | AT4G39330 | 76.307 | 287 | 67 | 1 | 6 | 291 | 72 | 358 | 4.42e-153 | 432 |
| MS.gene030674.t1 | AT2G21730 | 70.833 | 288 | 81 | 2 | 6 | 290 | 66 | 353 | 2.48e-142 | 405 |
| MS.gene030674.t1 | AT2G21890 | 71.429 | 287 | 80 | 2 | 6 | 290 | 66 | 352 | 2.56e-142 | 405 |
| MS.gene030674.t1 | AT4G37980 | 65.385 | 286 | 98 | 1 | 6 | 290 | 68 | 353 | 1.06e-121 | 352 |
| MS.gene030674.t1 | AT4G37970 | 59.375 | 288 | 116 | 1 | 6 | 292 | 73 | 360 | 3.21e-121 | 352 |
| MS.gene030674.t1 | AT4G37990 | 66.783 | 286 | 94 | 1 | 6 | 290 | 68 | 353 | 5.17e-121 | 351 |
| MS.gene030674.t1 | AT4G39330 | 73.913 | 230 | 59 | 1 | 6 | 234 | 72 | 301 | 3.31e-113 | 329 |
| MS.gene030674.t1 | AT1G72680 | 53.147 | 286 | 132 | 2 | 6 | 290 | 70 | 354 | 6.09e-97 | 290 |
| MS.gene030674.t1 | AT4G37970 | 59.193 | 223 | 90 | 1 | 6 | 227 | 73 | 295 | 5.09e-88 | 265 |
| MS.gene030674.t1 | AT4G37980 | 62.555 | 227 | 84 | 1 | 6 | 231 | 68 | 294 | 6.10e-86 | 259 |
| MS.gene030674.t1 | AT3G19450 | 49.123 | 285 | 144 | 1 | 6 | 289 | 70 | 354 | 3.13e-81 | 249 |
| MS.gene030674.t1 | AT4G34230 | 49.451 | 273 | 137 | 1 | 18 | 289 | 81 | 353 | 2.89e-80 | 247 |
| MS.gene030674.t1 | AT4G34230 | 49.084 | 273 | 138 | 1 | 18 | 289 | 81 | 353 | 2.44e-79 | 244 |
| MS.gene030674.t1 | AT4G37970 | 57.225 | 173 | 73 | 1 | 6 | 177 | 73 | 245 | 8.53e-63 | 199 |
| MS.gene030674.t1 | AT4G37970 | 57.895 | 171 | 71 | 1 | 6 | 175 | 73 | 243 | 4.61e-62 | 197 |
| MS.gene030674.t1 | AT5G63620 | 23.975 | 317 | 201 | 12 | 6 | 286 | 114 | 426 | 5.20e-14 | 72.4 |
| MS.gene030674.t1 | AT5G63620 | 23.975 | 317 | 201 | 12 | 6 | 286 | 114 | 426 | 1.47e-13 | 70.9 |
| MS.gene030674.t1 | AT5G43940 | 25.392 | 319 | 198 | 11 | 3 | 287 | 66 | 378 | 1.92e-12 | 67.4 |
| MS.gene030674.t1 | AT5G43940 | 25.392 | 319 | 198 | 11 | 3 | 287 | 78 | 390 | 2.29e-12 | 67.0 |
| MS.gene030674.t1 | AT1G22430 | 26.766 | 269 | 160 | 10 | 3 | 240 | 73 | 335 | 6.66e-12 | 65.9 |
| MS.gene030674.t1 | AT1G22430 | 26.766 | 269 | 160 | 10 | 3 | 240 | 73 | 335 | 6.66e-12 | 65.9 |
| MS.gene030674.t1 | AT5G51970 | 24.783 | 230 | 156 | 5 | 6 | 226 | 79 | 300 | 9.51e-12 | 65.1 |
| MS.gene030674.t1 | AT5G51970 | 24.783 | 230 | 156 | 5 | 6 | 226 | 79 | 300 | 9.51e-12 | 65.1 |
| MS.gene030674.t1 | AT5G63620 | 27.222 | 180 | 106 | 6 | 6 | 162 | 114 | 291 | 1.34e-11 | 64.7 |
Find 85 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATTCGGTAAAGCATT+TGG | 0.245686 | 4.3:+8820241 | MS.gene030674:CDS |
| ACCTATAACTCTCCTTATAA+AGG | 0.251163 | 4.3:+8820013 | MS.gene030674:CDS |
| ATGGCCTCAGTTTCCTTGTT+TGG | 0.279886 | 4.3:-8820292 | None:intergenic |
| TCTGTCTTTCCATTAGTTGC+AGG | 0.301516 | 4.3:+8821146 | MS.gene030674:CDS |
| GTGGCAGGGCTTGGTGGGTT+AGG | 0.307365 | 4.3:+8820208 | MS.gene030674:CDS |
| TGAGAATTGCAATCAAGATT+TGG | 0.319987 | 4.3:+8819964 | MS.gene030674:CDS |
| TAGGTTCGTGTCCCTTTATA+AGG | 0.354122 | 4.3:-8820025 | None:intergenic |
| TTGGGAGTGGCAGGGCTTGG+TGG | 0.355141 | 4.3:+8820202 | MS.gene030674:CDS |
| TTATAGGTAAATACAGGTTT+AGG | 0.360036 | 4.3:-8819998 | None:intergenic |
| CCCTTTATAAGGAGAGTTAT+AGG | 0.360288 | 4.3:-8820014 | None:intergenic |
| GTAGACCAAGCAGTGGCATC+AGG | 0.373980 | 4.3:-8821067 | None:intergenic |
| GATGGTTTACCTGCAACTAA+TGG | 0.378875 | 4.3:-8821155 | None:intergenic |
| TATAGCCCGATGAAGTATTA+TGG | 0.379807 | 4.3:+8820157 | MS.gene030674:CDS |
| GCCACTCCCAAATGTTTGCC+TGG | 0.380570 | 4.3:-8820190 | None:intergenic |
| CCTATAACTCTCCTTATAAA+GGG | 0.390671 | 4.3:+8820014 | MS.gene030674:CDS |
| GGCAAACATTTGGGAGTGGC+AGG | 0.391166 | 4.3:+8820193 | MS.gene030674:CDS |
| ACAAAGCTGATGTGAAATAT+CGG | 0.393376 | 4.3:+8821533 | MS.gene030674:CDS |
| ACTGAAGTTGAATGGGAAAC+TGG | 0.399835 | 4.3:+8821088 | MS.gene030674:CDS |
| GACTGAACCAGGCAAACATT+TGG | 0.404496 | 4.3:+8820183 | MS.gene030674:CDS |
| TCAAATTCGGTAAAGCATTT+GGG | 0.405047 | 4.3:+8820242 | MS.gene030674:CDS |
| ACTGCAGGACGGAAGCTTAT+CGG | 0.411894 | 4.3:+8821385 | MS.gene030674:intron |
| CATTTGGGAGTGGCAGGGCT+TGG | 0.412676 | 4.3:+8820199 | MS.gene030674:CDS |
| GGCCATGTTGCAATCAAATT+CGG | 0.413822 | 4.3:+8820229 | MS.gene030674:CDS |
| GGAGAGTTATAGGTAAATAC+AGG | 0.414003 | 4.3:-8820004 | None:intergenic |
| GTGCTCCACTTCTGTGTGCC+GGG | 0.418161 | 4.3:+8820125 | MS.gene030674:CDS |
| GGTGCTCCACTTCTGTGTGC+CGG | 0.433744 | 4.3:+8820124 | MS.gene030674:CDS |
| ACTGAACCAGGCAAACATTT+GGG | 0.439930 | 4.3:+8820184 | MS.gene030674:CDS |
| CATTCCCTGATGCCACTGCT+TGG | 0.448606 | 4.3:+8821062 | MS.gene030674:CDS |
| AAGTGGAGCACCAGCGTCAA+GGG | 0.477411 | 4.3:-8820113 | None:intergenic |
| CGGTAAAGCATTTGGGCTGA+AGG | 0.479081 | 4.3:+8820249 | MS.gene030674:CDS |
| CTCAGTTTCCTTGTTTGGAG+AGG | 0.482678 | 4.3:-8820287 | None:intergenic |
| GCGTCAAGGGGTAAGTTGTC+AGG | 0.483209 | 4.3:-8820100 | None:intergenic |
| TGGGAGTGGCAGGGCTTGGT+GGG | 0.488091 | 4.3:+8820203 | MS.gene030674:CDS |
| TCATACCATAATACTTCATC+GGG | 0.495385 | 4.3:-8820162 | None:intergenic |
| GAGAGCTCAAGGGGCTTGCT+AGG | 0.495481 | 4.3:-8821125 | None:intergenic |
| CTTGGTCTACTGAAGTTGAA+TGG | 0.496517 | 4.3:+8821080 | MS.gene030674:CDS |
| GTCATACCATAATACTTCAT+CGG | 0.503227 | 4.3:-8820163 | None:intergenic |
| GTTGGCGTTGTGACAAAAGT+TGG | 0.504641 | 4.3:+8819869 | MS.gene030674:CDS |
| TTGGTCTACTGAAGTTGAAT+GGG | 0.524981 | 4.3:+8821081 | MS.gene030674:CDS |
| AGCTTTGTGAAGCCTTTCCA+TGG | 0.525881 | 4.3:-8821518 | None:intergenic |
| TCTCAGGGTCTTTGGAAACA+AGG | 0.527412 | 4.3:-8820339 | None:intergenic |
| ATCAGCACCAAGTTTGTCAA+TGG | 0.528794 | 4.3:-8820311 | None:intergenic |
| CGGGCTATACACGGTGATCC+CGG | 0.532660 | 4.3:-8820143 | None:intergenic |
| GCATGAAATCAACACGGCCA+TGG | 0.534341 | 4.3:+8821501 | MS.gene030674:CDS |
| ATGGAAAGACAGAGAGCTCA+AGG | 0.539760 | 4.3:-8821136 | None:intergenic |
| GTGATCCCGGCACACAGAAG+TGG | 0.541709 | 4.3:-8820130 | None:intergenic |
| TATAAAGGGACACGAACCTA+TGG | 0.552541 | 4.3:+8820028 | MS.gene030674:CDS |
| AAATCAACACGGCCATGGAA+AGG | 0.552965 | 4.3:+8821506 | MS.gene030674:CDS |
| CTTATCGGAGGGAGTAACAT+TGG | 0.554132 | 4.3:+8821400 | MS.gene030674:CDS |
| AATGGGAAACTGGTCACTGT+AGG | 0.556394 | 4.3:+8821098 | MS.gene030674:CDS |
| CAAAGACCCTGAGAAAATGA+AGG | 0.559572 | 4.3:+8820348 | MS.gene030674:CDS |
| TGGAGGGATGAAAGAGACTC+AGG | 0.563071 | 4.3:+8821420 | MS.gene030674:CDS |
| ACTGAGGCCATTGACAAACT+TGG | 0.564477 | 4.3:+8820304 | MS.gene030674:CDS |
| GAAGTGGAGCACCAGCGTCA+AGG | 0.573782 | 4.3:-8820114 | None:intergenic |
| CTACAAACTTGAGAAGGAGT+TGG | 0.582204 | 4.3:-8821572 | None:intergenic |
| TATTAGTACCTCTCCAAACA+AGG | 0.586732 | 4.3:+8820279 | MS.gene030674:CDS |
| GCAGGCTGCTATGGGAACCA+TGG | 0.590820 | 4.3:+8821010 | MS.gene030674:intron |
| TATTATGGTATGACTGAACC+AGG | 0.592818 | 4.3:+8820172 | MS.gene030674:CDS |
| TGGCCTCTACAAACTTGAGA+AGG | 0.595694 | 4.3:-8821578 | None:intergenic |
| GCAAACATTTGGGAGTGGCA+GGG | 0.595862 | 4.3:+8820194 | MS.gene030674:CDS |
| TACCGAATTTGATTGCAACA+TGG | 0.599803 | 4.3:-8820231 | None:intergenic |
| ACCAGGCAAACATTTGGGAG+TGG | 0.602207 | 4.3:+8820189 | MS.gene030674:CDS |
| AAAATCAGAATAGCCACCAT+AGG | 0.602620 | 4.3:-8820044 | None:intergenic |
| TGGAAAGACAGAGAGCTCAA+GGG | 0.604195 | 4.3:-8821135 | None:intergenic |
| TCGGAGGGAGTAACATTGGA+GGG | 0.606287 | 4.3:+8821404 | MS.gene030674:CDS |
| TAGACCAAGCAGTGGCATCA+GGG | 0.607212 | 4.3:-8821066 | None:intergenic |
| ATCGGAGGGAGTAACATTGG+AGG | 0.607417 | 4.3:+8821403 | MS.gene030674:CDS |
| ACTCCTTCTCAAGTTTGTAG+AGG | 0.609994 | 4.3:+8821575 | MS.gene030674:CDS |
| GTGGGTGATAACGTTGGTGT+TGG | 0.610605 | 4.3:+8819914 | MS.gene030674:CDS |
| GAAACTGAACTACATACCGC+TGG | 0.611677 | 4.3:-8820078 | None:intergenic |
| GACAACTTACCCCTTGACGC+TGG | 0.625682 | 4.3:+8820103 | MS.gene030674:CDS |
| GGAAAGACAGAGAGCTCAAG+GGG | 0.626737 | 4.3:-8821134 | None:intergenic |
| CTCTCCAAACAAGGAAACTG+AGG | 0.630189 | 4.3:+8820288 | MS.gene030674:CDS |
| ATGGGAAACTGGTCACTGTA+GGG | 0.633427 | 4.3:+8821099 | MS.gene030674:CDS |
| AGTGGAGCACCAGCGTCAAG+GGG | 0.637977 | 4.3:-8820112 | None:intergenic |
| AAAGGGACACGAACCTATGG+TGG | 0.638008 | 4.3:+8820031 | MS.gene030674:CDS |
| TGTGTCTATGATGTAGTCCA+TGG | 0.640415 | 4.3:-8821027 | None:intergenic |
| CAGGAGATGCTCGATTTCTG+CGG | 0.641521 | 4.3:+8821439 | MS.gene030674:CDS |
| ATACTTCATCGGGCTATACA+CGG | 0.644181 | 4.3:-8820152 | None:intergenic |
| TTCAGAGTGGGTGATAACGT+TGG | 0.661444 | 4.3:+8819908 | MS.gene030674:CDS |
| GCAGGACGGAAGCTTATCGG+AGG | 0.666483 | 4.3:+8821388 | MS.gene030674:intron |
| CAGGACGGAAGCTTATCGGA+GGG | 0.671442 | 4.3:+8821389 | MS.gene030674:intron |
| ATATCGGTTTGTGATTGATG+TGG | 0.686371 | 4.3:+8821549 | MS.gene030674:CDS |
| AACTTCAGTAGACCAAGCAG+TGG | 0.689529 | 4.3:-8821074 | None:intergenic |
| TAAGATGCATGAAATCAACA+CGG | 0.753982 | 4.3:+8821495 | MS.gene030674:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATATATTCAGAAATA+AGG | - | chr4.3:8820688-8820707 | None:intergenic | 10.0% |
| !!! | AAATTTAAAATATTTTGTGT+AGG | - | chr4.3:8820559-8820578 | None:intergenic | 10.0% |
| !! | TAGAATAATATAGTAATTGT+TGG | + | chr4.3:8820590-8820609 | MS.gene030674:intron | 15.0% |
| !! | TATTTGATTGTTAAATTAGT+TGG | + | chr4.3:8819683-8819702 | MS.gene030674:intron | 15.0% |
| !!! | TTTTCATATTTGTTTTCTTT+TGG | + | chr4.3:8820906-8820925 | MS.gene030674:intron | 15.0% |
| !! | AAACTATTAATCAATAGTCA+AGG | - | chr4.3:8819717-8819736 | None:intergenic | 20.0% |
| !! | AATTGATAGAGAATTATTGA+TGG | - | chr4.3:8821176-8821195 | None:intergenic | 20.0% |
| !! | ATCCATAGTTTACTTATAAA+TGG | + | chr4.3:8820486-8820505 | MS.gene030674:intron | 20.0% |
| !! | ATTTAATTATCTGTTCGTAA+GGG | - | chr4.3:8819052-8819071 | None:intergenic | 20.0% |
| !! | CAATTCAAATTCACATATTA+TGG | - | chr4.3:8821207-8821226 | None:intergenic | 20.0% |
| !! | GAATTGAATAGAAAGAAAAA+TGG | + | chr4.3:8818507-8818526 | MS.gene030674:intron | 20.0% |
| !! | TATTTAATTATCTGTTCGTA+AGG | - | chr4.3:8819053-8819072 | None:intergenic | 20.0% |
| !! | TCCATAGTTTACTTATAAAT+GGG | + | chr4.3:8820487-8820506 | MS.gene030674:intron | 20.0% |
| !! | TGAAAATTTGGATAATTCAT+TGG | - | chr4.3:8821349-8821368 | None:intergenic | 20.0% |
| !! | TGTTAAACATGATTAAAAAC+AGG | - | chr4.3:8819101-8819120 | None:intergenic | 20.0% |
| !! | TTTGTTTATATACTCATTGA+CGG | - | chr4.3:8820761-8820780 | None:intergenic | 20.0% |
| !!! | GTTTAAATACAATTTTATGC+AGG | + | chr4.3:8820992-8821011 | MS.gene030674:intron | 20.0% |
| !!! | TAATTCACTTTATTTACCTT+TGG | + | chr4.3:8818728-8818747 | MS.gene030674:intron | 20.0% |
| !!! | TCTTTTTCATTAATGGTTTA+TGG | + | chr4.3:8819408-8819427 | MS.gene030674:intron | 20.0% |
| !!! | TGTTCATTCTTTTTCATTAA+TGG | + | chr4.3:8819401-8819420 | MS.gene030674:intron | 20.0% |
| !!! | TTTTCAAATTATTAGTGTGT+CGG | - | chr4.3:8819216-8819235 | None:intergenic | 20.0% |
| ! | AAACATACACATAATTCCAA+AGG | - | chr4.3:8818747-8818766 | None:intergenic | 25.0% |
| ! | AAACATGATTAAAAACAGGT+AGG | - | chr4.3:8819097-8819116 | None:intergenic | 25.0% |
| ! | AATGTGAAAAAATTCAGAGT+GGG | + | chr4.3:8819896-8819915 | MS.gene030674:CDS | 25.0% |
| ! | ACATTAGACATGTGAAAATT+TGG | - | chr4.3:8821361-8821380 | None:intergenic | 25.0% |
| ! | AGCTTATGAAAATTCTCATA+AGG | - | chr4.3:8818840-8818859 | None:intergenic | 25.0% |
| ! | AGTGTGAAAATTCTATATTG+TGG | + | chr4.3:8818274-8818293 | MS.gene030674:intron | 25.0% |
| ! | CATACTTGTCTATTAGAATT+TGG | + | chr4.3:8818694-8818713 | MS.gene030674:intron | 25.0% |
| ! | CTTGCTTATAAGTTATATGA+AGG | + | chr4.3:8819778-8819797 | MS.gene030674:intron | 25.0% |
| ! | TAATCATGTTTAACACACTT+AGG | + | chr4.3:8819106-8819125 | MS.gene030674:intron | 25.0% |
| ! | TAGGTGGTTATTCATATAAT+AGG | - | chr4.3:8819078-8819097 | None:intergenic | 25.0% |
| ! | TATTCAATTCAACAGAAAGA+CGG | - | chr4.3:8818497-8818516 | None:intergenic | 25.0% |
| ! | TTAAGTGTAATTACAAGTGT+CGG | + | chr4.3:8819246-8819265 | MS.gene030674:intron | 25.0% |
| ! | TTATAGGTAAATACAGGTTT+AGG | - | chr4.3:8820001-8820020 | None:intergenic | 25.0% |
| !! | AGACACATTATGTAATTTTG+AGG | - | chr4.3:8819484-8819503 | None:intergenic | 25.0% |
| !! | TTTGGAATTATGTGTATGTT+TGG | + | chr4.3:8818746-8818765 | MS.gene030674:intron | 25.0% |
| !!! | AACAAAAACAATGGATTGAT+TGG | + | chr4.3:8820942-8820961 | MS.gene030674:intron | 25.0% |
| !!! | ACCTCTAATTTTAATTTGAG+GGG | - | chr4.3:8818560-8818579 | None:intergenic | 25.0% |
| !!! | ACTTTTGAGGATTCAAATTA+AGG | - | chr4.3:8819142-8819161 | None:intergenic | 25.0% |
| !!! | ATCCAGAAATTTTGAAAACT+GGG | - | chr4.3:8820738-8820757 | None:intergenic | 25.0% |
| !!! | ATGTAATTTTGAGGTTACAT+GGG | - | chr4.3:8819475-8819494 | None:intergenic | 25.0% |
| !!! | CACCTCTAATTTTAATTTGA+GGG | - | chr4.3:8818561-8818580 | None:intergenic | 25.0% |
| !!! | TATGTAATTTTGAGGTTACA+TGG | - | chr4.3:8819476-8819495 | None:intergenic | 25.0% |
| AAAGAAAAACATACATACCC+AGG | - | chr4.3:8818364-8818383 | None:intergenic | 30.0% | |
| AATTTGAGGGGTAAAGAATT+GGG | - | chr4.3:8818548-8818567 | None:intergenic | 30.0% | |
| ACAAAGCTGATGTGAAATAT+CGG | + | chr4.3:8821533-8821552 | MS.gene030674:CDS | 30.0% | |
| ACCCCTCAAATTAAAATTAG+AGG | + | chr4.3:8818556-8818575 | MS.gene030674:intron | 30.0% | |
| ACCTATAACTCTCCTTATAA+AGG | + | chr4.3:8820013-8820032 | MS.gene030674:CDS | 30.0% | |
| ACGAAATAAGAGTAAAACAG+CGG | - | chr4.3:8820429-8820448 | None:intergenic | 30.0% | |
| AGTTATATGAAGGTAAAACC+AGG | + | chr4.3:8819788-8819807 | MS.gene030674:intron | 30.0% | |
| ATTAATAGTTTATGCGTGCA+TGG | + | chr4.3:8819726-8819745 | MS.gene030674:intron | 30.0% | |
| CAAATTAAAATTAGAGGTGG+AGG | + | chr4.3:8818562-8818581 | MS.gene030674:intron | 30.0% | |
| CAATGTGAAAAAATTCAGAG+TGG | + | chr4.3:8819895-8819914 | MS.gene030674:CDS | 30.0% | |
| CCTATAACTCTCCTTATAAA+GGG | + | chr4.3:8820014-8820033 | MS.gene030674:CDS | 30.0% | |
| CCTCAAATTAAAATTAGAGG+TGG | + | chr4.3:8818559-8818578 | MS.gene030674:intron | 30.0% | |
| CCTGAGTTTGAATAATAGAA+AGG | + | chr4.3:8820796-8820815 | MS.gene030674:intron | 30.0% | |
| CCTTTCTATTATTCAAACTC+AGG | - | chr4.3:8820799-8820818 | None:intergenic | 30.0% | |
| CTTTGTGCAATAGTCAATAT+TGG | + | chr4.3:8819749-8819768 | MS.gene030674:intron | 30.0% | |
| GAGAACACATGATTTGATTA+TGG | - | chr4.3:8820877-8820896 | None:intergenic | 30.0% | |
| GAGAATAAGTGTAGGTTATT+TGG | - | chr4.3:8820624-8820643 | None:intergenic | 30.0% | |
| GCCCATTTATAAGTAAACTA+TGG | - | chr4.3:8820491-8820510 | None:intergenic | 30.0% | |
| GGTTGTTGTAACAAAAACAA+TGG | + | chr4.3:8820933-8820952 | MS.gene030674:intron | 30.0% | |
| GTCATACCATAATACTTCAT+CGG | - | chr4.3:8820166-8820185 | None:intergenic | 30.0% | |
| GTTCTATATAGGAGTTGTTA+TGG | + | chr4.3:8820455-8820474 | MS.gene030674:intron | 30.0% | |
| TAAGATGCATGAAATCAACA+CGG | + | chr4.3:8821495-8821514 | MS.gene030674:CDS | 30.0% | |
| TAATTTGAGGGGTAAAGAAT+TGG | - | chr4.3:8818549-8818568 | None:intergenic | 30.0% | |
| TAGTTTACTTATAAATGGGC+AGG | + | chr4.3:8820491-8820510 | MS.gene030674:intron | 30.0% | |
| TCATACCATAATACTTCATC+GGG | - | chr4.3:8820165-8820184 | None:intergenic | 30.0% | |
| TGAGAATTGCAATCAAGATT+TGG | + | chr4.3:8819964-8819983 | MS.gene030674:CDS | 30.0% | |
| TGAGCATGTATAAATGTTTC+AGG | - | chr4.3:8821271-8821290 | None:intergenic | 30.0% | |
| TTCGTCATACAGTTCTATAT+AGG | + | chr4.3:8820444-8820463 | MS.gene030674:intron | 30.0% | |
| ! | ATCAAATTCGGTAAAGCATT+TGG | + | chr4.3:8820241-8820260 | MS.gene030674:CDS | 30.0% |
| ! | ATCTTACCTTCATTTTCTCA+GGG | - | chr4.3:8820357-8820376 | None:intergenic | 30.0% |
| ! | GATGATATGTATGCGATTTT+TGG | + | chr4.3:8819583-8819602 | MS.gene030674:intron | 30.0% |
| ! | GGGGCACTATATATATTAAT+TGG | - | chr4.3:8820717-8820736 | None:intergenic | 30.0% |
| ! | TAAATGTTTCAGGTCAGATT+TGG | - | chr4.3:8821261-8821280 | None:intergenic | 30.0% |
| ! | TATCTTACCTTCATTTTCTC+AGG | - | chr4.3:8820358-8820377 | None:intergenic | 30.0% |
| ! | TCAAATTCGGTAAAGCATTT+GGG | + | chr4.3:8820242-8820261 | MS.gene030674:CDS | 30.0% |
| !! | GATCCAGAAATTTTGAAAAC+TGG | - | chr4.3:8820739-8820758 | None:intergenic | 30.0% |
| !! | TATTTGTTTTCTTTTGGACC+AGG | + | chr4.3:8820912-8820931 | MS.gene030674:intron | 30.0% |
| !! | TCCAGAAATTTTGAAAACTG+GGG | - | chr4.3:8820737-8820756 | None:intergenic | 30.0% |
| !! | TTTGCAACTATTCACTTTTG+AGG | - | chr4.3:8819155-8819174 | None:intergenic | 30.0% |
| !!! | CAGGTTGGTTTTAAAGTTAA+TGG | - | chr4.3:8820386-8820405 | None:intergenic | 30.0% |
| !!! | CCACCTCTAATTTTAATTTG+AGG | - | chr4.3:8818562-8818581 | None:intergenic | 30.0% |
| !!! | TGGTTTTAAAGTTAATGGTG+TGG | - | chr4.3:8820381-8820400 | None:intergenic | 30.0% |
| !!! | TTAACTTGCATTGACTTTTG+TGG | + | chr4.3:8819823-8819842 | MS.gene030674:intron | 30.0% |
| !!! | TTGTTTTTGTTACAACAACC+TGG | - | chr4.3:8820933-8820952 | None:intergenic | 30.0% |
| AAAATCAGAATAGCCACCAT+AGG | - | chr4.3:8820047-8820066 | None:intergenic | 35.0% | |
| ACATGGGCAAATAGTTTACT+AGG | - | chr4.3:8819459-8819478 | None:intergenic | 35.0% | |
| CATGATTAAAAACAGGTAGG+TGG | - | chr4.3:8819094-8819113 | None:intergenic | 35.0% | |
| CCCTTTATAAGGAGAGTTAT+AGG | - | chr4.3:8820017-8820036 | None:intergenic | 35.0% | |
| CTGTGTTACAAATGAAGTCT+AGG | + | chr4.3:8819502-8819521 | MS.gene030674:intron | 35.0% | |
| GGAGAGTTATAGGTAAATAC+AGG | - | chr4.3:8820007-8820026 | None:intergenic | 35.0% | |
| GTATGACATAATCATCAAGC+AGG | - | chr4.3:8818669-8818688 | None:intergenic | 35.0% | |
| GTCAAGTGTGATTTAAGTGT+GGG | - | chr4.3:8820653-8820672 | None:intergenic | 35.0% | |
| TACCGAATTTGATTGCAACA+TGG | - | chr4.3:8820234-8820253 | None:intergenic | 35.0% | |
| TACTTTGCAACTATGAAGCA+CGG | - | chr4.3:8819330-8819349 | None:intergenic | 35.0% | |
| TATTAGTACCTCTCCAAACA+AGG | + | chr4.3:8820279-8820298 | MS.gene030674:CDS | 35.0% | |
| TATTATGGTATGACTGAACC+AGG | + | chr4.3:8820172-8820191 | MS.gene030674:CDS | 35.0% | |
| TGTCAAGTGTGATTTAAGTG+TGG | - | chr4.3:8820654-8820673 | None:intergenic | 35.0% | |
| TTGGTCTACTGAAGTTGAAT+GGG | + | chr4.3:8821081-8821100 | MS.gene030674:CDS | 35.0% | |
| ! | AATTTTATGCAGGCTGCTAT+GGG | + | chr4.3:8821002-8821021 | MS.gene030674:intron | 35.0% |
| ! | TATAGCCCGATGAAGTATTA+TGG | + | chr4.3:8820157-8820176 | MS.gene030674:CDS | 35.0% |
| ! | TCACTGCAGTTTTCTATCTT+TGG | + | chr4.3:8819646-8819665 | MS.gene030674:intron | 35.0% |
| ! | TTTTGCAGGCATGAAATTGT+TGG | + | chr4.3:8819851-8819870 | MS.gene030674:intron | 35.0% |
| !! | ATATCGGTTTGTGATTGATG+TGG | + | chr4.3:8821549-8821568 | MS.gene030674:CDS | 35.0% |
| !! | CCAGAAATTTTGAAAACTGG+GGG | - | chr4.3:8820736-8820755 | None:intergenic | 35.0% |
| !! | GATATGTATGCGATTTTTGG+TGG | + | chr4.3:8819586-8819605 | MS.gene030674:intron | 35.0% |
| AAAACCAACCTGTTTCGTCT+AGG | + | chr4.3:8820394-8820413 | MS.gene030674:intron | 40.0% | |
| AAAGCTATGAAGCACGGATA+CGG | + | chr4.3:8819172-8819191 | MS.gene030674:intron | 40.0% | |
| AAAGTTTCCGCTTCTAGATC+GGG | - | chr4.3:8819627-8819646 | None:intergenic | 40.0% | |
| ACACACTCTCAAGAACGATT+GGG | + | chr4.3:8818315-8818334 | MS.gene030674:intron | 40.0% | |
| ACTGAACCAGGCAAACATTT+GGG | + | chr4.3:8820184-8820203 | MS.gene030674:CDS | 40.0% | |
| ACTGAAGTTGAATGGGAAAC+TGG | + | chr4.3:8821088-8821107 | MS.gene030674:CDS | 40.0% | |
| AGGTAAAACCAGGACATCTT+TGG | + | chr4.3:8819798-8819817 | MS.gene030674:intron | 40.0% | |
| AGTTAATCCCAAAGATGTCC+TGG | - | chr4.3:8819809-8819828 | None:intergenic | 40.0% | |
| AGTTGCAAAGCTATGAAGCA+CGG | + | chr4.3:8819166-8819185 | MS.gene030674:intron | 40.0% | |
| ATAACCTAGACGAAACAGGT+TGG | - | chr4.3:8820401-8820420 | None:intergenic | 40.0% | |
| ATACATACCCAGGAACAACA+GGG | - | chr4.3:8818354-8818373 | None:intergenic | 40.0% | |
| ATACTTCATCGGGCTATACA+CGG | - | chr4.3:8820155-8820174 | None:intergenic | 40.0% | |
| ATCAGCACCAAGTTTGTCAA+TGG | - | chr4.3:8820314-8820333 | None:intergenic | 40.0% | |
| ATGTCTAATGTCTTGACTGC+AGG | + | chr4.3:8821370-8821389 | MS.gene030674:intron | 40.0% | |
| CAAAGACCCTGAGAAAATGA+AGG | + | chr4.3:8820348-8820367 | MS.gene030674:CDS | 40.0% | |
| CAATATTCCCGATCTAGAAG+CGG | + | chr4.3:8819617-8819636 | MS.gene030674:intron | 40.0% | |
| CACTGCAAAGACTGGAAATA+AGG | + | chr4.3:8819561-8819580 | MS.gene030674:intron | 40.0% | |
| CTACAAACTTGAGAAGGAGT+TGG | - | chr4.3:8821575-8821594 | None:intergenic | 40.0% | |
| CTTGGTCTACTGAAGTTGAA+TGG | + | chr4.3:8821080-8821099 | MS.gene030674:CDS | 40.0% | |
| GAAAGTTTCCGCTTCTAGAT+CGG | - | chr4.3:8819628-8819647 | None:intergenic | 40.0% | |
| GATGGTTTACCTGCAACTAA+TGG | - | chr4.3:8821158-8821177 | None:intergenic | 40.0% | |
| GGAAGTAACAGACTCATTCT+TGG | - | chr4.3:8821240-8821259 | None:intergenic | 40.0% | |
| GGCAAAGAGAGAATAAGTGT+AGG | - | chr4.3:8820632-8820651 | None:intergenic | 40.0% | |
| GGCCATGTTGCAATCAAATT+CGG | + | chr4.3:8820229-8820248 | MS.gene030674:CDS | 40.0% | |
| GGTAAAACCAGGACATCTTT+GGG | + | chr4.3:8819799-8819818 | MS.gene030674:intron | 40.0% | |
| GTCACAGATGTAGGCAAAAT+TGG | + | chr4.3:8820844-8820863 | MS.gene030674:intron | 40.0% | |
| TACACACTCTCAAGAACGAT+TGG | + | chr4.3:8818314-8818333 | MS.gene030674:intron | 40.0% | |
| TAGGTTCGTGTCCCTTTATA+AGG | - | chr4.3:8820028-8820047 | None:intergenic | 40.0% | |
| TATAAAGGGACACGAACCTA+TGG | + | chr4.3:8820028-8820047 | MS.gene030674:CDS | 40.0% | |
| TCTGTCTTTCCATTAGTTGC+AGG | + | chr4.3:8821146-8821165 | MS.gene030674:CDS | 40.0% | |
| TGTGTCTATGATGTAGTCCA+TGG | - | chr4.3:8821030-8821049 | None:intergenic | 40.0% | |
| ! | ATTTTGTGGTTGTTCACCAG+CGG | + | chr4.3:8820062-8820081 | MS.gene030674:CDS | 40.0% |
| ! | CAATTTTATGCAGGCTGCTA+TGG | + | chr4.3:8821001-8821020 | MS.gene030674:intron | 40.0% |
| ! | CCCCCAGTTTTCAAAATTTC+TGG | + | chr4.3:8820733-8820752 | MS.gene030674:intron | 40.0% |
| ! | CTGCAGTTTTCTATCTTTGG+AGG | + | chr4.3:8819649-8819668 | MS.gene030674:intron | 40.0% |
| ! | CTTCATTTTCTCAGGGTCTT+TGG | - | chr4.3:8820350-8820369 | None:intergenic | 40.0% |
| ! | CTTTTGTGGTTGTGTTTTGC+AGG | + | chr4.3:8819837-8819856 | MS.gene030674:intron | 40.0% |
| ! | TGGTGGCTATTCTGATTTTG+TGG | + | chr4.3:8820048-8820067 | MS.gene030674:CDS | 40.0% |
| AAATCAACACGGCCATGGAA+AGG | + | chr4.3:8821506-8821525 | MS.gene030674:CDS | 45.0% | |
| AACTCTGCAGTCACAGATGT+AGG | + | chr4.3:8820835-8820854 | MS.gene030674:intron | 45.0% | |
| AACTTCAGTAGACCAAGCAG+TGG | - | chr4.3:8821077-8821096 | None:intergenic | 45.0% | |
| AATGGGAAACTGGTCACTGT+AGG | + | chr4.3:8821098-8821117 | MS.gene030674:CDS | 45.0% | |
| ACTACTTACCCTGTTGTTCC+TGG | + | chr4.3:8818343-8818362 | MS.gene030674:intron | 45.0% | |
| ACTGAGGCCATTGACAAACT+TGG | + | chr4.3:8820304-8820323 | MS.gene030674:CDS | 45.0% | |
| ATGCATGTGTGATGTGGTGT+GGG | + | chr4.3:8820527-8820546 | MS.gene030674:intron | 45.0% | |
| ATGGAAAGACAGAGAGCTCA+AGG | - | chr4.3:8821139-8821158 | None:intergenic | 45.0% | |
| ATGGCCTCAGTTTCCTTGTT+TGG | - | chr4.3:8820295-8820314 | None:intergenic | 45.0% | |
| ATGGGAAACTGGTCACTGTA+GGG | + | chr4.3:8821099-8821118 | MS.gene030674:CDS | 45.0% | |
| CACACTCTCAAGAACGATTG+GGG | + | chr4.3:8818316-8818335 | MS.gene030674:intron | 45.0% | |
| CATACATACCCAGGAACAAC+AGG | - | chr4.3:8818355-8818374 | None:intergenic | 45.0% | |
| CTAATGTCTTGACTGCAGGA+CGG | + | chr4.3:8821374-8821393 | MS.gene030674:intron | 45.0% | |
| CTACTTACCCTGTTGTTCCT+GGG | + | chr4.3:8818344-8818363 | MS.gene030674:intron | 45.0% | |
| CTCTCCAAACAAGGAAACTG+AGG | + | chr4.3:8820288-8820307 | MS.gene030674:CDS | 45.0% | |
| CTTATCGGAGGGAGTAACAT+TGG | + | chr4.3:8821400-8821419 | MS.gene030674:CDS | 45.0% | |
| GAAACTGAACTACATACCGC+TGG | - | chr4.3:8820081-8820100 | None:intergenic | 45.0% | |
| GACTGAACCAGGCAAACATT+TGG | + | chr4.3:8820183-8820202 | MS.gene030674:CDS | 45.0% | |
| GAGCATAACCTAGACGAAAC+AGG | - | chr4.3:8820405-8820424 | None:intergenic | 45.0% | |
| GTTGGCGTTGTGACAAAAGT+TGG | + | chr4.3:8819869-8819888 | MS.gene030674:CDS | 45.0% | |
| TATAAATGGGCAGGTCGCTA+GGG | + | chr4.3:8820500-8820519 | MS.gene030674:intron | 45.0% | |
| TGGAAAGACAGAGAGCTCAA+GGG | - | chr4.3:8821138-8821157 | None:intergenic | 45.0% | |
| TTATAAATGGGCAGGTCGCT+AGG | + | chr4.3:8820499-8820518 | MS.gene030674:intron | 45.0% | |
| TTCAAGTGCACTGCAAAGAC+TGG | + | chr4.3:8819553-8819572 | MS.gene030674:intron | 45.0% | |
| ! | AGCTTTGTGAAGCCTTTCCA+TGG | - | chr4.3:8821521-8821540 | None:intergenic | 45.0% |
| ! | CTCAGTTTCCTTGTTTGGAG+AGG | - | chr4.3:8820290-8820309 | None:intergenic | 45.0% |
| ! | TCTCAGGGTCTTTGGAAACA+AGG | - | chr4.3:8820342-8820361 | None:intergenic | 45.0% |
| ! | TCTGTTCGTAAGGGCTTGTT+TGG | - | chr4.3:8819043-8819062 | None:intergenic | 45.0% |
| ! | TTCAGAGTGGGTGATAACGT+TGG | + | chr4.3:8819908-8819927 | MS.gene030674:CDS | 45.0% |
| AAAGGGACACGAACCTATGG+TGG | + | chr4.3:8820031-8820050 | MS.gene030674:CDS | 50.0% | |
| ACCAGGCAAACATTTGGGAG+TGG | + | chr4.3:8820189-8820208 | MS.gene030674:CDS | 50.0% | |
| ACTGCAGGACGGAAGCTTAT+CGG | + | chr4.3:8821385-8821404 | MS.gene030674:intron | 50.0% | |
| ATCGGAGGGAGTAACATTGG+AGG | + | chr4.3:8821403-8821422 | MS.gene030674:CDS | 50.0% | |
| CAGGAGATGCTCGATTTCTG+CGG | + | chr4.3:8821439-8821458 | MS.gene030674:CDS | 50.0% | |
| GATGCATGTGTGATGTGGTG+TGG | + | chr4.3:8820526-8820545 | MS.gene030674:intron | 50.0% | |
| GCAAACATTTGGGAGTGGCA+GGG | + | chr4.3:8820194-8820213 | MS.gene030674:CDS | 50.0% | |
| GCATGAAATCAACACGGCCA+TGG | + | chr4.3:8821501-8821520 | MS.gene030674:CDS | 50.0% | |
| GGAAAGACAGAGAGCTCAAG+GGG | - | chr4.3:8821137-8821156 | None:intergenic | 50.0% | |
| TAGACCAAGCAGTGGCATCA+GGG | - | chr4.3:8821069-8821088 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr4.3:8819319-8819338 | None:intergenic | 50.0% | |
| TCGGAGGGAGTAACATTGGA+GGG | + | chr4.3:8821404-8821423 | MS.gene030674:CDS | 50.0% | |
| TGGAGGGATGAAAGAGACTC+AGG | + | chr4.3:8821420-8821439 | MS.gene030674:CDS | 50.0% | |
| ! | CGGTAAAGCATTTGGGCTGA+AGG | + | chr4.3:8820249-8820268 | MS.gene030674:CDS | 50.0% |
| ! | GTGGGTGATAACGTTGGTGT+TGG | + | chr4.3:8819914-8819933 | MS.gene030674:CDS | 50.0% |
| !! | TACAAGTGTCGGTCTCGTGT+TGG | + | chr4.3:8819257-8819276 | MS.gene030674:intron | 50.0% |
| CAGGACGGAAGCTTATCGGA+GGG | + | chr4.3:8821389-8821408 | MS.gene030674:intron | 55.0% | |
| CATTCCCTGATGCCACTGCT+TGG | + | chr4.3:8821062-8821081 | MS.gene030674:CDS | 55.0% | |
| GACAACTTACCCCTTGACGC+TGG | + | chr4.3:8820103-8820122 | MS.gene030674:CDS | 55.0% | |
| GATTAGGCGTGTCCTGGTGT+CGG | - | chr4.3:8819297-8819316 | None:intergenic | 55.0% | |
| GCCACTCCCAAATGTTTGCC+TGG | - | chr4.3:8820193-8820212 | None:intergenic | 55.0% | |
| GCGTCAAGGGGTAAGTTGTC+AGG | - | chr4.3:8820103-8820122 | None:intergenic | 55.0% | |
| GGACGGATGCATGTGTGATG+TGG | + | chr4.3:8820521-8820540 | MS.gene030674:intron | 55.0% | |
| GGCAAACATTTGGGAGTGGC+AGG | + | chr4.3:8820193-8820212 | MS.gene030674:CDS | 55.0% | |
| GTAGACCAAGCAGTGGCATC+AGG | - | chr4.3:8821070-8821089 | None:intergenic | 55.0% | |
| TGAAGCACGGATACGGACAC+CGG | + | chr4.3:8819179-8819198 | MS.gene030674:intron | 55.0% | |
| ! | AAGTGGAGCACCAGCGTCAA+GGG | - | chr4.3:8820116-8820135 | None:intergenic | 55.0% |
| ! | TGTCGGTCTCGTGTTGGTGT+CGG | + | chr4.3:8819263-8819282 | MS.gene030674:intron | 55.0% |
| AATGGGCAGGTCGCTAGGGA+CGG | + | chr4.3:8820504-8820523 | MS.gene030674:intron | 60.0% | |
| ACCAGGACACGCCTAATCCG+AGG | + | chr4.3:8819299-8819318 | MS.gene030674:intron | 60.0% | |
| CATTTGGGAGTGGCAGGGCT+TGG | + | chr4.3:8820199-8820218 | MS.gene030674:CDS | 60.0% | |
| CGGGCTATACACGGTGATCC+CGG | - | chr4.3:8820146-8820165 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr4.3:8819313-8819332 | None:intergenic | 60.0% | |
| GCAGGACGGAAGCTTATCGG+AGG | + | chr4.3:8821388-8821407 | MS.gene030674:intron | 60.0% | |
| GCAGGCTGCTATGGGAACCA+TGG | + | chr4.3:8821010-8821029 | MS.gene030674:intron | 60.0% | |
| GGTGCTCCACTTCTGTGTGC+CGG | + | chr4.3:8820124-8820143 | MS.gene030674:CDS | 60.0% | |
| GTGATCCCGGCACACAGAAG+TGG | - | chr4.3:8820133-8820152 | None:intergenic | 60.0% | |
| GTGCTCCACTTCTGTGTGCC+GGG | + | chr4.3:8820125-8820144 | MS.gene030674:CDS | 60.0% | |
| TCGGACATGTGTCCGACACC+AGG | + | chr4.3:8819282-8819301 | MS.gene030674:intron | 60.0% | |
| ! | AGTGGAGCACCAGCGTCAAG+GGG | - | chr4.3:8820115-8820134 | None:intergenic | 60.0% |
| ! | GAAGTGGAGCACCAGCGTCA+AGG | - | chr4.3:8820117-8820136 | None:intergenic | 60.0% |
| ! | GAGAGCTCAAGGGGCTTGCT+AGG | - | chr4.3:8821128-8821147 | None:intergenic | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+TGG | - | chr4.3:8819303-8819322 | None:intergenic | 60.0% |
| ! | TGTGTCGGCGTGTCAGTGTC+CGG | - | chr4.3:8819201-8819220 | None:intergenic | 60.0% |
| TTGGGAGTGGCAGGGCTTGG+TGG | + | chr4.3:8820202-8820221 | MS.gene030674:CDS | 65.0% | |
| ! | TGGGAGTGGCAGGGCTTGGT+GGG | + | chr4.3:8820203-8820222 | MS.gene030674:CDS | 65.0% |
| !! | GTGGCAGGGCTTGGTGGGTT+AGG | + | chr4.3:8820208-8820227 | MS.gene030674:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 8818257 | 8821594 | 8818257 | ID=MS.gene030674 |
| chr4.3 | mRNA | 8818257 | 8821594 | 8818257 | ID=MS.gene030674.t1;Parent=MS.gene030674 |
| chr4.3 | exon | 8818257 | 8818270 | 8818257 | ID=MS.gene030674.t1.exon1;Parent=MS.gene030674.t1 |
| chr4.3 | CDS | 8818257 | 8818270 | 8818257 | ID=cds.MS.gene030674.t1;Parent=MS.gene030674.t1 |
| chr4.3 | exon | 8819859 | 8820369 | 8819859 | ID=MS.gene030674.t1.exon2;Parent=MS.gene030674.t1 |
| chr4.3 | CDS | 8819859 | 8820369 | 8819859 | ID=cds.MS.gene030674.t1;Parent=MS.gene030674.t1 |
| chr4.3 | exon | 8821014 | 8821167 | 8821014 | ID=MS.gene030674.t1.exon3;Parent=MS.gene030674.t1 |
| chr4.3 | CDS | 8821014 | 8821167 | 8821014 | ID=cds.MS.gene030674.t1;Parent=MS.gene030674.t1 |
| chr4.3 | exon | 8821392 | 8821594 | 8821392 | ID=MS.gene030674.t1.exon4;Parent=MS.gene030674.t1 |
| chr4.3 | CDS | 8821392 | 8821594 | 8821392 | ID=cds.MS.gene030674.t1;Parent=MS.gene030674.t1 |
| Gene Sequence |
| Protein sequence |
