Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28444.t1 | O82515.1 | 99.7 | 326 | 1 | 0 | 99 | 424 | 34 | 359 | 6.80E-188 | 666.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28444.t1 | O82515 | 99.7 | 326 | 1 | 0 | 99 | 424 | 34 | 359 | 1.6e-190 | 666.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28444.t1 | Q53X16 | 99.7 | 326 | 1 | 0 | 99 | 424 | 34 | 359 | 4.9e-188 | 666.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene28444 | -0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene28444 | 0.826997 | 1.99E-54 | -1.69E-46 |
| MS.gene049259 | MS.gene28444 | -0.850156 | 2.04E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene28444 | 0.802519 | 5.40E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene28444 | -0.820726 | 5.89E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene28444 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene28444 | -0.842799 | 2.07E-58 | -1.69E-46 |
| MS.gene050082 | MS.gene28444 | -0.81843 | 1.97E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene28444 | 0.811279 | 7.58E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene28444 | 0.832287 | 1.03E-55 | -1.69E-46 |
| MS.gene050173 | MS.gene28444 | -0.821147 | 4.71E-53 | -1.69E-46 |
| MS.gene050216 | MS.gene28444 | 0.851931 | 6.43E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene28444 | 0.845884 | 3.07E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene28444 | -0.842143 | 3.09E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene28444 | 0.851348 | 9.41E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene28444 | 0.834074 | 3.70E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene28444 | 0.802858 | 4.59E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene28444 | 0.847652 | 1.01E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene28444 | 0.819217 | 1.30E-52 | -1.69E-46 |
| MS.gene050697 | MS.gene28444 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene28444 | -0.819221 | 1.30E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene28444 | 0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene28444 | 0.8874 | 1.48E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene28444 | 0.886848 | 2.39E-72 | -1.69E-46 |
| MS.gene050904 | MS.gene28444 | 0.806057 | 9.89E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene28444 | 0.820593 | 6.32E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene28444 | -0.810958 | 8.90E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene28444 | -0.807382 | 5.19E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene28444 | -0.845041 | 5.20E-59 | -1.69E-46 |
| MS.gene051138 | MS.gene28444 | -0.880531 | 5.08E-70 | -1.69E-46 |
| MS.gene051268 | MS.gene28444 | 0.873141 | 1.85E-67 | -1.69E-46 |
| MS.gene051317 | MS.gene28444 | 0.805452 | 1.33E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene28444 | 0.802803 | 4.72E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene28444 | -0.812814 | 3.51E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene28444 | -0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene28444 | 0.81742 | 3.33E-52 | -1.69E-46 |
| MS.gene052066 | MS.gene28444 | 0.804687 | 1.92E-49 | -1.69E-46 |
| MS.gene052566 | MS.gene28444 | -0.803564 | 3.28E-49 | -1.69E-46 |
| MS.gene052805 | MS.gene28444 | -0.804059 | 2.59E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene28444 | 0.804553 | 2.04E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene28444 | 0.833556 | 4.98E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene28444 | -0.868109 | 8.33E-66 | -1.69E-46 |
| MS.gene053479 | MS.gene28444 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene28444 | -0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene28444 | -0.845952 | 2.95E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene28444 | 0.808066 | 3.72E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene28444 | -0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene054054 | MS.gene28444 | -0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene28444 | -0.83825 | 3.22E-57 | -1.69E-46 |
| MS.gene054616 | MS.gene28444 | -0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene28444 | -0.8048 | 1.82E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene28444 | 0.809853 | 1.54E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene28444 | 0.822194 | 2.70E-53 | -1.69E-46 |
| MS.gene055124 | MS.gene28444 | -0.815084 | 1.11E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene28444 | -0.831331 | 1.77E-55 | -1.69E-46 |
| MS.gene055202 | MS.gene28444 | -0.866206 | 3.38E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene28444 | 0.82406 | 9.90E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene28444 | 0.821578 | 3.75E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene28444 | 0.819099 | 1.39E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene28444 | 0.845429 | 4.08E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene28444 | 0.831272 | 1.83E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene28444 | 0.851973 | 6.26E-61 | -1.69E-46 |
| MS.gene055942 | MS.gene28444 | -0.835005 | 2.16E-56 | -1.69E-46 |
| MS.gene055959 | MS.gene28444 | -0.811527 | 6.70E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene28444 | -0.811669 | 6.24E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene28444 | 0.846814 | 1.72E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene28444 | 0.859168 | 4.99E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene28444 | 0.815491 | 9.00E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene28444 | -0.844528 | 7.15E-59 | -1.69E-46 |
| MS.gene056857 | MS.gene28444 | -0.831663 | 1.47E-55 | -1.69E-46 |
| MS.gene057014 | MS.gene28444 | -0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene28444 | 0.803026 | 4.24E-49 | -1.69E-46 |
| MS.gene057768 | MS.gene28444 | -0.824295 | 8.72E-54 | -1.69E-46 |
| MS.gene058093 | MS.gene28444 | -0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene28444 | -0.846695 | 1.85E-59 | -1.69E-46 |
| MS.gene058108 | MS.gene28444 | -0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene058109 | MS.gene28444 | -0.832007 | 1.21E-55 | -1.69E-46 |
| MS.gene058117 | MS.gene28444 | -0.820669 | 6.07E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene28444 | -0.865849 | 4.38E-65 | -1.69E-46 |
| MS.gene058173 | MS.gene28444 | -0.86209 | 6.48E-64 | -1.69E-46 |
| MS.gene058175 | MS.gene28444 | -0.8713 | 7.59E-67 | -1.69E-46 |
| MS.gene058268 | MS.gene28444 | -0.840046 | 1.10E-57 | -1.69E-46 |
| MS.gene058269 | MS.gene28444 | -0.834156 | 3.53E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene28444 | 0.812482 | 4.15E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene28444 | -0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene28444 | 0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene058978 | MS.gene28444 | -0.827922 | 1.20E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene28444 | 0.830048 | 3.66E-55 | -1.69E-46 |
| MS.gene059037 | MS.gene28444 | -0.812349 | 4.43E-51 | -1.69E-46 |
| MS.gene059038 | MS.gene28444 | -0.806865 | 6.68E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene28444 | -0.866117 | 3.61E-65 | -1.69E-46 |
| MS.gene05913 | MS.gene28444 | 0.81884 | 1.59E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene28444 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene059690 | MS.gene28444 | -0.811672 | 6.23E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene28444 | -0.801015 | 1.10E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene28444 | 0.873528 | 1.37E-67 | -1.69E-46 |
| MS.gene059943 | MS.gene28444 | -0.814487 | 1.50E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene28444 | 0.826297 | 2.93E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene28444 | -0.838009 | 3.71E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene28444 | 0.802547 | 5.33E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene28444 | 0.841976 | 3.43E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene28444 | 0.839275 | 1.75E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene28444 | 0.817061 | 4.01E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene28444 | 0.842412 | 2.63E-58 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28444.t1 | MTR_8g092630 | 97.853 | 326 | 7 | 0 | 99 | 424 | 91 | 416 | 0.0 | 663 |
| MS.gene28444.t1 | MTR_5g031230 | 64.815 | 324 | 113 | 1 | 99 | 421 | 34 | 357 | 3.55e-153 | 438 |
| MS.gene28444.t1 | MTR_4g115300 | 64.815 | 324 | 113 | 1 | 99 | 421 | 34 | 357 | 1.30e-152 | 436 |
| MS.gene28444.t1 | MTR_5g031190 | 64.724 | 326 | 114 | 1 | 99 | 423 | 34 | 359 | 2.51e-150 | 431 |
| MS.gene28444.t1 | MTR_5g031310 | 61.728 | 324 | 123 | 1 | 99 | 421 | 35 | 358 | 2.68e-148 | 426 |
| MS.gene28444.t1 | MTR_5g031390 | 62.577 | 326 | 121 | 1 | 99 | 423 | 34 | 359 | 1.52e-147 | 424 |
| MS.gene28444.t1 | MTR_5g031360 | 62.654 | 324 | 120 | 1 | 99 | 421 | 36 | 359 | 5.00e-147 | 422 |
| MS.gene28444.t1 | MTR_5g031250 | 62.963 | 324 | 119 | 1 | 99 | 421 | 34 | 357 | 6.27e-147 | 422 |
| MS.gene28444.t1 | MTR_5g031305 | 61.111 | 324 | 125 | 1 | 99 | 421 | 35 | 358 | 7.97e-145 | 417 |
| MS.gene28444.t1 | MTR_8g068190 | 64.417 | 326 | 115 | 1 | 99 | 423 | 34 | 359 | 2.05e-143 | 413 |
| MS.gene28444.t1 | MTR_5g031300 | 57.716 | 324 | 136 | 1 | 99 | 421 | 35 | 358 | 1.56e-141 | 408 |
| MS.gene28444.t1 | MTR_5g031210 | 62.346 | 324 | 121 | 1 | 99 | 421 | 34 | 357 | 8.73e-141 | 406 |
| MS.gene28444.t1 | MTR_5g031180 | 63.497 | 326 | 118 | 1 | 99 | 423 | 34 | 359 | 2.47e-137 | 398 |
| MS.gene28444.t1 | MTR_1g025950 | 60.245 | 327 | 128 | 2 | 96 | 420 | 30 | 356 | 4.14e-132 | 384 |
| MS.gene28444.t1 | MTR_5g031430 | 58.204 | 323 | 134 | 1 | 100 | 421 | 35 | 357 | 3.02e-124 | 364 |
| MS.gene28444.t1 | MTR_1g107425 | 50.462 | 325 | 160 | 1 | 97 | 420 | 30 | 354 | 4.91e-108 | 323 |
| MS.gene28444.t1 | MTR_2g009810 | 54.462 | 325 | 145 | 3 | 99 | 421 | 82 | 405 | 7.59e-108 | 324 |
| MS.gene28444.t1 | MTR_5g031250 | 61.538 | 208 | 79 | 1 | 99 | 305 | 34 | 241 | 3.63e-88 | 269 |
| MS.gene28444.t1 | MTR_1g107425 | 51.341 | 261 | 125 | 2 | 97 | 356 | 30 | 289 | 6.20e-84 | 259 |
| MS.gene28444.t1 | MTR_2g009820 | 50.607 | 247 | 115 | 4 | 181 | 421 | 8 | 253 | 1.17e-62 | 203 |
| MS.gene28444.t1 | MTR_5g031290 | 64.602 | 113 | 40 | 0 | 311 | 423 | 80 | 192 | 6.27e-47 | 160 |
| MS.gene28444.t1 | MTR_5g031290 | 66.667 | 51 | 16 | 1 | 99 | 148 | 34 | 84 | 3.12e-16 | 77.0 |
| MS.gene28444.t1 | MTR_4g132880 | 73.684 | 76 | 12 | 1 | 23 | 98 | 80 | 147 | 3.48e-24 | 98.6 |
| MS.gene28444.t1 | MTR_8g095220 | 28.358 | 268 | 161 | 10 | 104 | 343 | 80 | 344 | 5.09e-22 | 97.8 |
| MS.gene28444.t1 | MTR_8g095220 | 29.577 | 213 | 124 | 7 | 104 | 293 | 80 | 289 | 1.28e-20 | 92.4 |
| MS.gene28444.t1 | MTR_0001s0660 | 27.554 | 323 | 197 | 12 | 86 | 382 | 22 | 333 | 6.34e-16 | 79.7 |
| MS.gene28444.t1 | MTR_6g466320 | 24.632 | 272 | 179 | 8 | 101 | 357 | 38 | 298 | 6.90e-15 | 75.9 |
| MS.gene28444.t1 | MTR_6g465010 | 24.632 | 272 | 179 | 8 | 101 | 357 | 38 | 298 | 6.90e-15 | 75.9 |
| MS.gene28444.t1 | MTR_6g465010 | 24.632 | 272 | 179 | 8 | 101 | 357 | 22 | 282 | 1.02e-14 | 75.5 |
| MS.gene28444.t1 | MTR_7g099040 | 25.294 | 340 | 211 | 12 | 103 | 406 | 37 | 369 | 5.77e-14 | 73.6 |
| MS.gene28444.t1 | MTR_1g069430 | 25.074 | 339 | 211 | 12 | 104 | 406 | 36 | 367 | 1.28e-12 | 69.3 |
| MS.gene28444.t1 | MTR_6g453350 | 49.074 | 108 | 30 | 3 | 3 | 107 | 84 | 169 | 1.75e-12 | 65.9 |
| MS.gene28444.t1 | MTR_3g079180 | 25.839 | 298 | 186 | 13 | 104 | 371 | 41 | 333 | 8.60e-12 | 66.6 |
| MS.gene28444.t1 | MTR_3g099460 | 26.426 | 333 | 180 | 13 | 88 | 376 | 32 | 343 | 9.27e-12 | 66.6 |
| MS.gene28444.t1 | MTR_3g099460 | 26.426 | 333 | 180 | 13 | 88 | 376 | 25 | 336 | 9.94e-12 | 66.6 |
| MS.gene28444.t1 | MTR_8g064610 | 26.829 | 246 | 144 | 7 | 102 | 336 | 103 | 323 | 4.84e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28444.t1 | AT4G39330 | 76.000 | 325 | 77 | 1 | 99 | 422 | 34 | 358 | 4.13e-179 | 504 |
| MS.gene28444.t1 | AT2G21890 | 71.692 | 325 | 90 | 2 | 99 | 421 | 28 | 352 | 2.29e-168 | 477 |
| MS.gene28444.t1 | AT2G21730 | 71.166 | 326 | 91 | 2 | 99 | 421 | 28 | 353 | 3.67e-168 | 476 |
| MS.gene28444.t1 | AT4G37990 | 66.358 | 324 | 108 | 1 | 99 | 421 | 30 | 353 | 3.54e-144 | 415 |
| MS.gene28444.t1 | AT4G37980 | 64.706 | 323 | 113 | 1 | 100 | 421 | 31 | 353 | 8.91e-143 | 411 |
| MS.gene28444.t1 | AT4G37970 | 59.509 | 326 | 131 | 1 | 99 | 423 | 35 | 360 | 2.02e-142 | 410 |
| MS.gene28444.t1 | AT4G39330 | 72.464 | 276 | 75 | 1 | 99 | 373 | 34 | 309 | 7.89e-139 | 400 |
| MS.gene28444.t1 | AT1G72680 | 52.812 | 320 | 149 | 2 | 103 | 421 | 36 | 354 | 1.24e-109 | 327 |
| MS.gene28444.t1 | AT4G37970 | 58.712 | 264 | 108 | 1 | 99 | 361 | 35 | 298 | 1.35e-108 | 322 |
| MS.gene28444.t1 | AT4G37980 | 62.121 | 264 | 99 | 1 | 100 | 362 | 31 | 294 | 3.80e-106 | 316 |
| MS.gene28444.t1 | AT3G19450 | 49.538 | 325 | 163 | 1 | 97 | 420 | 30 | 354 | 2.05e-100 | 304 |
| MS.gene28444.t1 | AT4G34230 | 50.462 | 325 | 160 | 1 | 97 | 420 | 29 | 353 | 1.08e-96 | 294 |
| MS.gene28444.t1 | AT4G34230 | 50.154 | 325 | 161 | 1 | 97 | 420 | 29 | 353 | 1.14e-95 | 291 |
| MS.gene28444.t1 | AT4G37970 | 57.820 | 211 | 88 | 1 | 99 | 308 | 35 | 245 | 4.44e-83 | 255 |
| MS.gene28444.t1 | AT4G37970 | 58.373 | 209 | 86 | 1 | 99 | 306 | 35 | 243 | 8.67e-83 | 254 |
| MS.gene28444.t1 | AT5G63620 | 27.881 | 269 | 163 | 9 | 103 | 343 | 81 | 346 | 2.04e-23 | 102 |
| MS.gene28444.t1 | AT5G63620 | 27.881 | 269 | 163 | 9 | 103 | 343 | 81 | 346 | 2.49e-23 | 101 |
| MS.gene28444.t1 | AT5G63620 | 29.907 | 214 | 124 | 7 | 103 | 293 | 81 | 291 | 1.84e-21 | 94.7 |
| MS.gene28444.t1 | AT5G43940 | 26.286 | 350 | 218 | 11 | 104 | 419 | 36 | 379 | 1.48e-18 | 87.4 |
| MS.gene28444.t1 | AT5G43940 | 26.286 | 350 | 218 | 11 | 104 | 419 | 48 | 391 | 1.49e-18 | 87.4 |
| MS.gene28444.t1 | AT1G22430 | 27.541 | 305 | 183 | 11 | 104 | 376 | 42 | 340 | 7.55e-18 | 85.1 |
| MS.gene28444.t1 | AT1G22430 | 27.541 | 305 | 183 | 11 | 104 | 376 | 42 | 340 | 7.55e-18 | 85.1 |
| MS.gene28444.t1 | AT5G51970 | 26.838 | 272 | 173 | 8 | 101 | 357 | 40 | 300 | 1.30e-17 | 84.3 |
| MS.gene28444.t1 | AT5G51970 | 26.838 | 272 | 173 | 8 | 101 | 357 | 40 | 300 | 1.30e-17 | 84.3 |
| MS.gene28444.t1 | AT4G22110 | 26.549 | 339 | 205 | 13 | 104 | 404 | 43 | 375 | 4.42e-16 | 80.1 |
| MS.gene28444.t1 | AT4G22110 | 26.549 | 339 | 205 | 13 | 104 | 404 | 43 | 375 | 4.42e-16 | 80.1 |
| MS.gene28444.t1 | AT1G64710 | 24.412 | 340 | 215 | 14 | 104 | 406 | 13 | 347 | 1.35e-14 | 75.1 |
| MS.gene28444.t1 | AT1G64710 | 24.412 | 340 | 215 | 14 | 104 | 406 | 36 | 370 | 1.78e-14 | 75.1 |
| MS.gene28444.t1 | AT1G22430 | 27.778 | 216 | 129 | 6 | 104 | 297 | 42 | 252 | 7.50e-14 | 72.4 |
| MS.gene28444.t1 | AT1G22430 | 27.778 | 216 | 129 | 6 | 104 | 297 | 42 | 252 | 1.06e-13 | 71.6 |
| MS.gene28444.t1 | AT1G22430 | 27.778 | 216 | 129 | 6 | 104 | 297 | 42 | 252 | 1.06e-13 | 71.6 |
| MS.gene28444.t1 | AT5G42250 | 23.512 | 336 | 219 | 10 | 104 | 404 | 45 | 377 | 1.21e-13 | 72.4 |
| MS.gene28444.t1 | AT1G22440 | 26.733 | 303 | 178 | 12 | 104 | 371 | 40 | 333 | 3.73e-13 | 70.9 |
| MS.gene28444.t1 | AT4G22110 | 27.528 | 178 | 104 | 4 | 104 | 260 | 43 | 216 | 2.24e-12 | 67.8 |
| MS.gene28444.t1 | AT1G77120 | 21.448 | 359 | 231 | 11 | 88 | 408 | 24 | 369 | 9.56e-11 | 63.5 |
Find 110 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGTTGCTATATGAGTTAC+TGG | 0.188561 | 4.4:-8607664 | None:intergenic |
| GTTGAAAATGAAGAGAAATT+AGG | 0.228849 | 4.4:-8607383 | MS.gene28444:CDS |
| ATCAAATTCGGTAAAGCATT+TGG | 0.245686 | 4.4:-8602339 | MS.gene28444:CDS |
| ACTACTTACCCTGTTGTTCC+TGG | 0.250937 | 4.4:-8604231 | MS.gene28444:CDS |
| ACCTATAACTCTCCTTATAA+AGG | 0.251163 | 4.4:-8602567 | MS.gene28444:CDS |
| ATGGCCTCAGTTTCCTTGTT+TGG | 0.279886 | 4.4:+8602288 | None:intergenic |
| TCTCTCAAAATGCTAATAAA+AGG | 0.296391 | 4.4:-8607574 | MS.gene28444:CDS |
| TCTGTCTTTCCATTAGTTGC+AGG | 0.301516 | 4.4:-8601434 | MS.gene28444:intron |
| GTGGCAGGGCTTGGTGGGTT+AGG | 0.307365 | 4.4:-8602372 | MS.gene28444:CDS |
| TGAGAATTGCAATCAAGATT+TGG | 0.319987 | 4.4:-8602616 | MS.gene28444:CDS |
| TTGAAAATGAAGAGAAATTA+GGG | 0.352393 | 4.4:-8607382 | MS.gene28444:intron |
| TAGGTTCGTGTCCCTTTATA+AGG | 0.354122 | 4.4:+8602555 | None:intergenic |
| TTGGGAGTGGCAGGGCTTGG+TGG | 0.355141 | 4.4:-8602378 | MS.gene28444:CDS |
| TTATAGGTAAATACAGGTTT+AGG | 0.360036 | 4.4:+8602582 | None:intergenic |
| CCCTTTATAAGGAGAGTTAT+AGG | 0.360288 | 4.4:+8602566 | None:intergenic |
| GTAGACCAAGCAGTGGCATC+AGG | 0.373980 | 4.4:+8601513 | None:intergenic |
| GATGGTTTACCTGCAACTAA+TGG | 0.378875 | 4.4:+8601425 | None:intergenic |
| TATAGCCCGATGAAGTATTA+TGG | 0.379807 | 4.4:-8602423 | MS.gene28444:CDS |
| GCCACTCCCAAATGTTTGCC+TGG | 0.380570 | 4.4:+8602390 | None:intergenic |
| CATACATACCCAGGAACAAC+AGG | 0.380990 | 4.4:+8604222 | None:intergenic |
| CCTATAACTCTCCTTATAAA+GGG | 0.390671 | 4.4:-8602566 | MS.gene28444:CDS |
| GGCAAACATTTGGGAGTGGC+AGG | 0.391166 | 4.4:-8602387 | MS.gene28444:CDS |
| ACAAAGCTGATGTGAAATAT+CGG | 0.393376 | 4.4:-8601047 | MS.gene28444:CDS |
| ACTGAAGTTGAATGGGAAAC+TGG | 0.399835 | 4.4:-8601492 | MS.gene28444:CDS |
| GACTGAACCAGGCAAACATT+TGG | 0.404496 | 4.4:-8602397 | MS.gene28444:CDS |
| TCAAATTCGGTAAAGCATTT+GGG | 0.405047 | 4.4:-8602338 | MS.gene28444:CDS |
| ACTGCAGGACGGAAGCTTAT+CGG | 0.411894 | 4.4:-8601195 | MS.gene28444:intron |
| CATTTGGGAGTGGCAGGGCT+TGG | 0.412676 | 4.4:-8602381 | MS.gene28444:CDS |
| GGCCATGTTGCAATCAAATT+CGG | 0.413822 | 4.4:-8602351 | MS.gene28444:CDS |
| GGAGAGTTATAGGTAAATAC+AGG | 0.414003 | 4.4:+8602576 | None:intergenic |
| CTACTTACCCTGTTGTTCCT+GGG | 0.415236 | 4.4:-8604230 | MS.gene28444:intron |
| GTGCTCCACTTCTGTGTGCC+GGG | 0.418161 | 4.4:-8602455 | MS.gene28444:CDS |
| GGTGCTCCACTTCTGTGTGC+CGG | 0.433744 | 4.4:-8602456 | MS.gene28444:CDS |
| ACTGAACCAGGCAAACATTT+GGG | 0.439930 | 4.4:-8602396 | MS.gene28444:CDS |
| TCTGTGAATGAATTGGTGAT+TGG | 0.443914 | 4.4:+8607622 | None:intergenic |
| CATTCCCTGATGCCACTGCT+TGG | 0.448606 | 4.4:-8601518 | MS.gene28444:CDS |
| CAATGATTCTGTGAATGAAT+TGG | 0.449474 | 4.4:+8607615 | None:intergenic |
| AAATCGCTCCGAGTTGGAAT+CGG | 0.473051 | 4.4:-8607495 | MS.gene28444:CDS |
| ACACACTCTCAAGAACGATT+GGG | 0.475053 | 4.4:-8604259 | MS.gene28444:CDS |
| AAGTGGAGCACCAGCGTCAA+GGG | 0.477411 | 4.4:+8602467 | None:intergenic |
| CGGTAAAGCATTTGGGCTGA+AGG | 0.479081 | 4.4:-8602331 | MS.gene28444:CDS |
| TACACACTCTCAAGAACGAT+TGG | 0.482360 | 4.4:-8604260 | MS.gene28444:CDS |
| CTGTGAATGAATTGGTGATT+GGG | 0.482441 | 4.4:+8607623 | None:intergenic |
| CTCAGTTTCCTTGTTTGGAG+AGG | 0.482678 | 4.4:+8602293 | None:intergenic |
| GCGTCAAGGGGTAAGTTGTC+AGG | 0.483209 | 4.4:+8602480 | None:intergenic |
| TGGGAGTGGCAGGGCTTGGT+GGG | 0.488091 | 4.4:-8602377 | MS.gene28444:CDS |
| TCATACCATAATACTTCATC+GGG | 0.495385 | 4.4:+8602418 | None:intergenic |
| GAGAGCTCAAGGGGCTTGCT+AGG | 0.495481 | 4.4:+8601455 | None:intergenic |
| CTTGGTCTACTGAAGTTGAA+TGG | 0.496517 | 4.4:-8601500 | MS.gene28444:CDS |
| GTCATACCATAATACTTCAT+CGG | 0.503227 | 4.4:+8602417 | None:intergenic |
| CCGTTGCTATATGAGTTACT+GGG | 0.504310 | 4.4:-8607663 | None:intergenic |
| GTTGGCGTTGTGACAAAAGT+TGG | 0.504641 | 4.4:-8602711 | MS.gene28444:CDS |
| TTGGTCTACTGAAGTTGAAT+GGG | 0.524981 | 4.4:-8601499 | MS.gene28444:CDS |
| AGCTTTGTGAAGCCTTTCCA+TGG | 0.525881 | 4.4:+8601062 | None:intergenic |
| TCTCAGGGTCTTTGGAAACA+AGG | 0.527412 | 4.4:+8602241 | None:intergenic |
| ATCAGCACCAAGTTTGTCAA+TGG | 0.528794 | 4.4:+8602269 | None:intergenic |
| CTCCGTTACCGATTCCAACT+CGG | 0.528907 | 4.4:+8607487 | None:intergenic |
| GAATGAAATCAACACGGCCA+TGG | 0.532045 | 4.4:-8601079 | MS.gene28444:CDS |
| CGGGCTATACACGGTGATCC+CGG | 0.532660 | 4.4:+8602437 | None:intergenic |
| ATATGAGTTACTGGGTTCGT+TGG | 0.538401 | 4.4:-8607655 | MS.gene28444:CDS |
| ATGGAAAGACAGAGAGCTCA+AGG | 0.539760 | 4.4:+8601444 | None:intergenic |
| TGAGTCAAATCGCTCCGAGT+TGG | 0.540017 | 4.4:-8607501 | MS.gene28444:CDS |
| GTGATCCCGGCACACAGAAG+TGG | 0.541709 | 4.4:+8602450 | None:intergenic |
| AGTGGTGATAGTAATATTGT+TGG | 0.543927 | 4.4:-8607461 | MS.gene28444:CDS |
| TATAAAGGGACACGAACCTA+TGG | 0.552541 | 4.4:-8602552 | MS.gene28444:CDS |
| AAATCAACACGGCCATGGAA+AGG | 0.552965 | 4.4:-8601074 | MS.gene28444:CDS |
| CTTATCGGAGGGAGTAACAT+TGG | 0.554132 | 4.4:-8601180 | MS.gene28444:CDS |
| AATGGGAAACTGGTCACTGT+AGG | 0.556394 | 4.4:-8601482 | MS.gene28444:CDS |
| CAAAGACCCTGAGAAAATGA+AGG | 0.559572 | 4.4:-8602232 | MS.gene28444:intron |
| TGGAGGGATGAAAGAGACTC+AGG | 0.563071 | 4.4:-8601160 | MS.gene28444:CDS |
| ACTGAGGCCATTGACAAACT+TGG | 0.564477 | 4.4:-8602276 | MS.gene28444:CDS |
| CTCCGAGTTGGAATCGGTAA+CGG | 0.564804 | 4.4:-8607489 | MS.gene28444:CDS |
| TCAAAATGCTAATAAAAGGA+AGG | 0.569026 | 4.4:-8607570 | MS.gene28444:CDS |
| GAAGTGGAGCACCAGCGTCA+AGG | 0.573782 | 4.4:+8602466 | None:intergenic |
| CTACAAACTTGAGAAGGAGT+TGG | 0.582204 | 4.4:+8601008 | None:intergenic |
| TATTAGTACCTCTCCAAACA+AGG | 0.586732 | 4.4:-8602301 | MS.gene28444:CDS |
| AGTGTCAAAATTCTATATTG+TGG | 0.589949 | 4.4:-8604300 | MS.gene28444:CDS |
| CACACTCTCAAGAACGATTG+GGG | 0.590819 | 4.4:-8604258 | MS.gene28444:CDS |
| GCAGGCTGCTATGGGAACCA+TGG | 0.590820 | 4.4:-8601570 | MS.gene28444:intron |
| TATTATGGTATGACTGAACC+AGG | 0.592818 | 4.4:-8602408 | MS.gene28444:CDS |
| TGGCCTCTACAAACTTGAGA+AGG | 0.595694 | 4.4:+8601002 | None:intergenic |
| GCAAACATTTGGGAGTGGCA+GGG | 0.595862 | 4.4:-8602386 | MS.gene28444:CDS |
| TACCGAATTTGATTGCAACA+TGG | 0.599803 | 4.4:+8602349 | None:intergenic |
| ACCAGGCAAACATTTGGGAG+TGG | 0.602207 | 4.4:-8602391 | MS.gene28444:CDS |
| AAAATCAGAATAGCCACCAT+AGG | 0.602620 | 4.4:+8602536 | None:intergenic |
| TGGAAAGACAGAGAGCTCAA+GGG | 0.604195 | 4.4:+8601445 | None:intergenic |
| TCGGAGGGAGTAACATTGGA+GGG | 0.606287 | 4.4:-8601176 | MS.gene28444:CDS |
| TAGACCAAGCAGTGGCATCA+GGG | 0.607212 | 4.4:+8601514 | None:intergenic |
| ATCGGAGGGAGTAACATTGG+AGG | 0.607417 | 4.4:-8601177 | MS.gene28444:CDS |
| ACTCCTTCTCAAGTTTGTAG+AGG | 0.609994 | 4.4:-8601005 | None:intergenic |
| GTGGGTGATAACGTTGGTGT+TGG | 0.610605 | 4.4:-8602666 | MS.gene28444:CDS |
| GAAACTGAACTACATACCGC+TGG | 0.611677 | 4.4:+8602502 | None:intergenic |
| GACAACTTACCCCTTGACGC+TGG | 0.625682 | 4.4:-8602477 | MS.gene28444:CDS |
| GGAAAGACAGAGAGCTCAAG+GGG | 0.626737 | 4.4:+8601446 | None:intergenic |
| CTCTCCAAACAAGGAAACTG+AGG | 0.630189 | 4.4:-8602292 | MS.gene28444:CDS |
| ATGGGAAACTGGTCACTGTA+GGG | 0.633427 | 4.4:-8601481 | MS.gene28444:CDS |
| AGTGGAGCACCAGCGTCAAG+GGG | 0.637977 | 4.4:+8602468 | None:intergenic |
| AAAGGGACACGAACCTATGG+TGG | 0.638008 | 4.4:-8602549 | MS.gene28444:CDS |
| TGTGTCTATGATGTAGTCCA+TGG | 0.640415 | 4.4:+8601553 | None:intergenic |
| CAGGAGATGCTCGATTTCTG+CGG | 0.641521 | 4.4:-8601141 | MS.gene28444:CDS |
| ATACTTCATCGGGCTATACA+CGG | 0.644181 | 4.4:+8602428 | None:intergenic |
| GAATCGGTAACGGAGAGTAG+TGG | 0.649701 | 4.4:-8607479 | MS.gene28444:CDS |
| TTCAGAGTGGGTGATAACGT+TGG | 0.661444 | 4.4:-8602672 | MS.gene28444:CDS |
| GCAGGACGGAAGCTTATCGG+AGG | 0.666483 | 4.4:-8601192 | MS.gene28444:intron |
| CAGGACGGAAGCTTATCGGA+GGG | 0.671442 | 4.4:-8601191 | MS.gene28444:CDS |
| GGTGTTATCAATGCTAGTGA+AGG | 0.674348 | 4.4:-8607440 | MS.gene28444:CDS |
| ATATCGGTTTGTGATTGATG+TGG | 0.686371 | 4.4:-8601031 | MS.gene28444:CDS |
| AACTTCAGTAGACCAAGCAG+TGG | 0.689529 | 4.4:+8601506 | None:intergenic |
| ATACATACCCAGGAACAACA+GGG | 0.734302 | 4.4:+8604223 | None:intergenic |
| TAAGATGAATGAAATCAACA+CGG | 0.744997 | 4.4:-8601085 | MS.gene28444:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATATATTCAGAAATA+AGG | + | chr4.4:8606769-8606788 | None:intergenic | 10.0% |
| !! | TATAAAATCTAATTATTTGT+GGG | + | chr4.4:8603750-8603769 | None:intergenic | 10.0% |
| !! | TTATAAAATCTAATTATTTG+TGG | + | chr4.4:8603751-8603770 | None:intergenic | 10.0% |
| !!! | AAATTTAAAATATTTTGTGT+AGG | + | chr4.4:8606640-8606659 | None:intergenic | 10.0% |
| !!! | CAAATAATTAGATTTTATAA+TGG | - | chr4.4:8603751-8603770 | MS.gene28444:intron | 10.0% |
| !!! | GATTAATTTTTATTTTTTGT+AGG | - | chr4.4:8604317-8604336 | MS.gene28444:CDS | 10.0% |
| !! | AAAAATAAAGGAATCATAAA+TGG | + | chr4.4:8601433-8601452 | None:intergenic | 15.0% |
| !! | ACTAAAAGAAAATTATAGTT+TGG | - | chr4.4:8601490-8601509 | MS.gene28444:CDS | 15.0% |
| !! | ATGAAATTATTATTGTTAGA+TGG | + | chr4.4:8602337-8602356 | None:intergenic | 15.0% |
| !! | TAGAATAATATAGTAATTGT+TGG | - | chr4.4:8606671-8606690 | MS.gene28444:intron | 15.0% |
| !! | TATTTGATTGTTAAATTAGT+TGG | - | chr4.4:8605764-8605783 | MS.gene28444:intron | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+CGG | - | chr4.4:8602857-8602876 | MS.gene28444:intron | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+TGG | - | chr4.4:8602857-8602876 | MS.gene28444:intron | 15.0% |
| !!! | TGTAATTTTTTTTTTTGTGT+TGG | + | chr4.4:8601371-8601390 | None:intergenic | 15.0% |
| !!! | TTTTCATATTTGTTTTCTTT+TGG | - | chr4.4:8606987-8607006 | MS.gene28444:intron | 15.0% |
| !! | AAACCAAAATAATTGTCTAA+TGG | + | chr4.4:8602228-8602247 | None:intergenic | 20.0% |
| !! | AAACCATAATTATGGTTTAA+TGG | + | chr4.4:8602271-8602290 | None:intergenic | 20.0% |
| !! | AAACCATTAAACCATAATTA+TGG | - | chr4.4:8602265-8602284 | MS.gene28444:CDS | 20.0% |
| !! | AAACCATTAAGTACATATAA+TGG | - | chr4.4:8602077-8602096 | MS.gene28444:intron | 20.0% |
| !! | AAACCATTATATGTACTTAA+TGG | + | chr4.4:8602083-8602102 | None:intergenic | 20.0% |
| !! | AAACTATTAATCAATAGTCA+AGG | + | chr4.4:8605798-8605817 | None:intergenic | 20.0% |
| !! | AAATCATTACACAATTATCT+TGG | - | chr4.4:8602360-8602379 | MS.gene28444:CDS | 20.0% |
| !! | ATCCATAGTTTACTTATAAA+TGG | - | chr4.4:8606567-8606586 | MS.gene28444:intron | 20.0% |
| !! | ATTTAATTATCTGTTCGTAA+GGG | + | chr4.4:8605125-8605144 | None:intergenic | 20.0% |
| !! | CAAAAGGCAATAAAAAATAA+AGG | + | chr4.4:8601445-8601464 | None:intergenic | 20.0% |
| !! | CAATTCAAATTCACATATTA+TGG | + | chr4.4:8607288-8607307 | None:intergenic | 20.0% |
| !! | TATTACTGAAACCATAATTA+TGG | + | chr4.4:8602279-8602298 | None:intergenic | 20.0% |
| !! | TATTTAATTATCTGTTCGTA+AGG | + | chr4.4:8605126-8605145 | None:intergenic | 20.0% |
| !! | TCCATAGTTTACTTATAAAT+GGG | - | chr4.4:8606568-8606587 | MS.gene28444:intron | 20.0% |
| !! | TGAAAATTTGGATAATTCAT+TGG | + | chr4.4:8607430-8607449 | None:intergenic | 20.0% |
| !! | TGTTAAACATGATTAAAAAC+AGG | + | chr4.4:8605174-8605193 | None:intergenic | 20.0% |
| !! | TGTTGAATTGAATAGAAATA+TGG | - | chr4.4:8604591-8604610 | MS.gene28444:intron | 20.0% |
| !! | TTATAATATGGGACTTTATT+AGG | - | chr4.4:8603724-8603743 | MS.gene28444:intron | 20.0% |
| !! | TTGAAAATGAAGAGAAATTA+GGG | - | chr4.4:8601279-8601298 | MS.gene28444:intron | 20.0% |
| !! | TTTGTTTATATACTCATTGA+CGG | + | chr4.4:8606842-8606861 | None:intergenic | 20.0% |
| !!! | AAACCATTAGACAATTATTT+TGG | - | chr4.4:8602222-8602241 | MS.gene28444:intron | 20.0% |
| !!! | AATTTTGTCTACAACTAAAT+GGG | + | chr4.4:8603857-8603876 | None:intergenic | 20.0% |
| !!! | AGTGTATTTATTGACTTATA+CGG | + | chr4.4:8604066-8604085 | None:intergenic | 20.0% |
| !!! | ATTACAAAATCAGTTTGTTT+TGG | - | chr4.4:8601385-8601404 | MS.gene28444:intron | 20.0% |
| !!! | ATTTTATAATGGACTTACTT+GGG | - | chr4.4:8603762-8603781 | MS.gene28444:intron | 20.0% |
| !!! | GATTCAAATTCTGTTTTTTA+AGG | + | chr4.4:8605215-8605234 | None:intergenic | 20.0% |
| !!! | GTTTAAATACAATTTTATGC+AGG | - | chr4.4:8607073-8607092 | MS.gene28444:intron | 20.0% |
| !!! | TAATTCACTTTATTTACCTT+TGG | - | chr4.4:8604800-8604819 | MS.gene28444:intron | 20.0% |
| !!! | TAATTTTGTCTACAACTAAA+TGG | + | chr4.4:8603858-8603877 | None:intergenic | 20.0% |
| !!! | TCTTTTTCATTAATGGTTTA+CGG | - | chr4.4:8605490-8605509 | MS.gene28444:intron | 20.0% |
| !!! | TGTTCATTCTTTTTCATTAA+TGG | - | chr4.4:8605483-8605502 | MS.gene28444:intron | 20.0% |
| !!! | TTAAGTACATATAATGGTTT+TGG | - | chr4.4:8602083-8602102 | MS.gene28444:intron | 20.0% |
| !!! | TTACAAAATCAGTTTGTTTT+GGG | - | chr4.4:8601386-8601405 | MS.gene28444:intron | 20.0% |
| !!! | TTTATTTTTTGTAGGGAAAA+TGG | - | chr4.4:8604325-8604344 | MS.gene28444:CDS | 20.0% |
| !!! | TTTTGAATTTTCTGTGAAAA+TGG | + | chr4.4:8602060-8602079 | None:intergenic | 20.0% |
| ! | AAAAAGTGATCCTAATAAGT+TGG | - | chr4.4:8603678-8603697 | MS.gene28444:intron | 25.0% |
| ! | AAAAGTGATCCTAATAAGTT+GGG | - | chr4.4:8603679-8603698 | MS.gene28444:intron | 25.0% |
| ! | AAACATACACATAATTCCAA+AGG | + | chr4.4:8604819-8604838 | None:intergenic | 25.0% |
| ! | AAACATGATTAAAAACAGGT+AGG | + | chr4.4:8605170-8605189 | None:intergenic | 25.0% |
| ! | AAACCATTAAGTACATCTAA+TGG | - | chr4.4:8601954-8601973 | MS.gene28444:intron | 25.0% |
| ! | AAACCATTAGATGTACTTAA+TGG | + | chr4.4:8601960-8601979 | None:intergenic | 25.0% |
| ! | AAGGAATCATAAATGGAAAA+AGG | + | chr4.4:8601426-8601445 | None:intergenic | 25.0% |
| ! | AATGTGAAAAAATTCAGAGT+GGG | - | chr4.4:8605977-8605996 | MS.gene28444:intron | 25.0% |
| ! | AATTGACAGAGAATTATTGA+TGG | + | chr4.4:8607257-8607276 | None:intergenic | 25.0% |
| ! | ACATTAGACATGTGAAAATT+TGG | + | chr4.4:8607442-8607461 | None:intergenic | 25.0% |
| ! | AGTGTCAAAATTCTATATTG+TGG | - | chr4.4:8604361-8604380 | MS.gene28444:intron | 25.0% |
| ! | CATACTTGTCTATTAGAATT+TGG | - | chr4.4:8604766-8604785 | MS.gene28444:intron | 25.0% |
| ! | CATTAATCCTAGTAAACTAT+TGG | - | chr4.4:8605530-8605549 | MS.gene28444:intron | 25.0% |
| ! | CTTGCTTATAAGTTATATGA+AGG | - | chr4.4:8605859-8605878 | MS.gene28444:intron | 25.0% |
| ! | GTGTAAAAAACAATTATGCA+CGG | - | chr4.4:8603807-8603826 | MS.gene28444:intron | 25.0% |
| ! | GTTCTATATAGGAGTTATTA+TGG | - | chr4.4:8606536-8606555 | MS.gene28444:intron | 25.0% |
| ! | GTTGAAAATGAAGAGAAATT+AGG | - | chr4.4:8601278-8601297 | MS.gene28444:intron | 25.0% |
| ! | TAAATGTTTCAGTTCAGATT+TGG | + | chr4.4:8607342-8607361 | None:intergenic | 25.0% |
| ! | TAAGATGAATGAAATCAACA+CGG | - | chr4.4:8607576-8607595 | MS.gene28444:CDS | 25.0% |
| ! | TAATCATGTTTAACACACTT+AGG | - | chr4.4:8605179-8605198 | MS.gene28444:intron | 25.0% |
| ! | TAGGTGGTTATTCATATAAT+AGG | + | chr4.4:8605151-8605170 | None:intergenic | 25.0% |
| ! | TATTCAATTCAACAGAAAGA+CGG | + | chr4.4:8604585-8604604 | None:intergenic | 25.0% |
| ! | TCAAAATGCTAATAAAAGGA+AGG | - | chr4.4:8601091-8601110 | MS.gene28444:CDS | 25.0% |
| ! | TCTCTCAAAATGCTAATAAA+AGG | - | chr4.4:8601087-8601106 | MS.gene28444:CDS | 25.0% |
| ! | TTAAGTGTAATTACAAGTGT+CGG | - | chr4.4:8605328-8605347 | MS.gene28444:intron | 25.0% |
| ! | TTATAGGTAAATACAGGTTT+AGG | + | chr4.4:8606082-8606101 | None:intergenic | 25.0% |
| !! | AACAGTTTCTAAAAACAGTT+TGG | - | chr4.4:8601810-8601829 | MS.gene28444:intron | 25.0% |
| !! | AGACACATTATGTAATTTTG+AGG | + | chr4.4:8605565-8605584 | None:intergenic | 25.0% |
| !! | ATTTTCTTTTAGTACATCAC+AGG | + | chr4.4:8601483-8601502 | None:intergenic | 25.0% |
| !! | GATGATATGTATGTGATTTT+TGG | - | chr4.4:8605664-8605683 | MS.gene28444:intron | 25.0% |
| !! | TTAAGTACATCTAATGGTTT+TGG | - | chr4.4:8601960-8601979 | MS.gene28444:intron | 25.0% |
| !! | TTTGGAATTATGTGTATGTT+TGG | - | chr4.4:8604818-8604837 | MS.gene28444:intron | 25.0% |
| !!! | AAATGAGTGTTGATTCTATT+AGG | - | chr4.4:8604000-8604019 | MS.gene28444:intron | 25.0% |
| !!! | AACAAAAACAATGGATTGAT+TGG | - | chr4.4:8607023-8607042 | MS.gene28444:intron | 25.0% |
| !!! | AATAAGCTGTTTTGAATAAG+CGG | - | chr4.4:8602656-8602675 | MS.gene28444:CDS | 25.0% |
| !!! | AGAAAGATTTTGAGTTTCAT+TGG | - | chr4.4:8601308-8601327 | MS.gene28444:intron | 25.0% |
| !!! | ATCCAGAAATTTTGAAAACT+GGG | + | chr4.4:8606819-8606838 | None:intergenic | 25.0% |
| !!! | ATGTAATTTTGAGGTTACAT+GGG | + | chr4.4:8605556-8605575 | None:intergenic | 25.0% |
| !!! | ATTGTCTAATGGTTTTGTTA+TGG | + | chr4.4:8602217-8602236 | None:intergenic | 25.0% |
| !!! | GATTTTATAATGGACTTACT+TGG | - | chr4.4:8603761-8603780 | MS.gene28444:intron | 25.0% |
| !!! | TATGTAATTTTGAGGTTACA+TGG | + | chr4.4:8605557-8605576 | None:intergenic | 25.0% |
| !!! | TTTTATAATGGACTTACTTG+GGG | - | chr4.4:8603763-8603782 | MS.gene28444:intron | 25.0% |
| !!! | TTTTTTTTTGTGTTGGAACT+TGG | + | chr4.4:8601364-8601383 | None:intergenic | 25.0% |
| AAAGAAAAACATACATACCC+AGG | + | chr4.4:8604451-8604470 | None:intergenic | 30.0% | |
| AAGGAGAAGAAAAACAAGAA+AGG | - | chr4.4:8601110-8601129 | MS.gene28444:CDS | 30.0% | |
| AATTTGAGGGGTAAAGAATT+GGG | + | chr4.4:8604632-8604651 | None:intergenic | 30.0% | |
| ACAAAGCTGATGTGAAATAT+CGG | - | chr4.4:8607614-8607633 | MS.gene28444:CDS | 30.0% | |
| ACCTATAACTCTCCTTATAA+AGG | - | chr4.4:8606094-8606113 | MS.gene28444:intron | 30.0% | |
| ACGAAATAAGAGTAAAACAG+CGG | + | chr4.4:8606510-8606529 | None:intergenic | 30.0% | |
| ACTTAAAGATGGTCCATATT+TGG | - | chr4.4:8603950-8603969 | MS.gene28444:intron | 30.0% | |
| AGTGGTGATAGTAATATTGT+TGG | - | chr4.4:8601200-8601219 | MS.gene28444:intron | 30.0% | |
| AGTTATATGAAGGTAAAACC+AGG | - | chr4.4:8605869-8605888 | MS.gene28444:intron | 30.0% | |
| ATGTTGTTGCTATATGAATC+TGG | - | chr4.4:8601833-8601852 | MS.gene28444:intron | 30.0% | |
| ATTAATAGTTTATGCGTGCA+TGG | - | chr4.4:8605807-8605826 | MS.gene28444:intron | 30.0% | |
| CAATGATTCTGTGAATGAAT+TGG | + | chr4.4:8601049-8601068 | None:intergenic | 30.0% | |
| CAATGTGAAAAAATTCAGAG+TGG | - | chr4.4:8605976-8605995 | MS.gene28444:intron | 30.0% | |
| CCTATAACTCTCCTTATAAA+GGG | - | chr4.4:8606095-8606114 | MS.gene28444:intron | 30.0% | |
| CCTGAGTTTGAATAATAGAA+AGG | - | chr4.4:8606877-8606896 | MS.gene28444:intron | 30.0% | |
| CCTTTCTATTATTCAAACTC+AGG | + | chr4.4:8606880-8606899 | None:intergenic | 30.0% | |
| CTTTGTGCAATAGTCAATAT+TGG | - | chr4.4:8605830-8605849 | MS.gene28444:intron | 30.0% | |
| GAAAGTGATTAATGCACAAA+AGG | + | chr4.4:8601461-8601480 | None:intergenic | 30.0% | |
| GAGAACACATGATTTGATTA+TGG | + | chr4.4:8606958-8606977 | None:intergenic | 30.0% | |
| GAGAATAAGTGTAGGTTATT+TGG | + | chr4.4:8606705-8606724 | None:intergenic | 30.0% | |
| GCCCATTTATAAGTAAACTA+TGG | + | chr4.4:8606572-8606591 | None:intergenic | 30.0% | |
| GGTTGTTGTAACAAAAACAA+TGG | - | chr4.4:8607014-8607033 | MS.gene28444:intron | 30.0% | |
| GTCATACCATAATACTTCAT+CGG | + | chr4.4:8606247-8606266 | None:intergenic | 30.0% | |
| GTGTAGAATGCAATTATGTT+GGG | - | chr4.4:8603785-8603804 | MS.gene28444:intron | 30.0% | |
| TAATTTGAGGGGTAAAGAAT+TGG | + | chr4.4:8604633-8604652 | None:intergenic | 30.0% | |
| TAGTTTACTTATAAATGGGC+AGG | - | chr4.4:8606572-8606591 | MS.gene28444:intron | 30.0% | |
| TCATACCATAATACTTCATC+GGG | + | chr4.4:8606246-8606265 | None:intergenic | 30.0% | |
| TGAAATCACTTCAACTAACT+AGG | - | chr4.4:8603898-8603917 | MS.gene28444:intron | 30.0% | |
| TGAGAATTGCAATCAAGATT+TGG | - | chr4.4:8606045-8606064 | MS.gene28444:intron | 30.0% | |
| TGGATTATGAGTTTCTTTAC+TGG | + | chr4.4:8602461-8602480 | None:intergenic | 30.0% | |
| TTCGTCATACAGTTCTATAT+AGG | - | chr4.4:8606525-8606544 | MS.gene28444:intron | 30.0% | |
| TTTCATTGGAGAAAGGATTT+GGG | - | chr4.4:8601322-8601341 | MS.gene28444:intron | 30.0% | |
| ! | AACTCATTTCTTTTACTGAC+TGG | - | chr4.4:8601615-8601634 | MS.gene28444:intron | 30.0% |
| ! | ATCAAATTCGGTAAAGCATT+TGG | - | chr4.4:8606322-8606341 | MS.gene28444:intron | 30.0% |
| ! | ATCTTACCTTCATTTTCTCA+GGG | + | chr4.4:8606438-8606457 | None:intergenic | 30.0% |
| ! | GGGGCACTATATATATTAAT+TGG | + | chr4.4:8606798-8606817 | None:intergenic | 30.0% |
| ! | TATCTTACCTTCATTTTCTC+AGG | + | chr4.4:8606439-8606458 | None:intergenic | 30.0% |
| ! | TCAAATTCGGTAAAGCATTT+GGG | - | chr4.4:8606323-8606342 | MS.gene28444:intron | 30.0% |
| ! | TGATAAGTCTGCGAATTTTA+TGG | - | chr4.4:8601588-8601607 | MS.gene28444:intron | 30.0% |
| !! | ACTCATTTCTTTTACTGACT+GGG | - | chr4.4:8601616-8601635 | MS.gene28444:intron | 30.0% |
| !! | GATATGTATGTGATTTTTGG+TGG | - | chr4.4:8605667-8605686 | MS.gene28444:intron | 30.0% |
| !! | GATCCAGAAATTTTGAAAAC+TGG | + | chr4.4:8606820-8606839 | None:intergenic | 30.0% |
| !! | TATTTGTTTTCTTTTGGACC+AGG | - | chr4.4:8606993-8607012 | MS.gene28444:intron | 30.0% |
| !! | TCCAGAAATTTTGAAAACTG+GGG | + | chr4.4:8606818-8606837 | None:intergenic | 30.0% |
| !! | TTACTGACTGGGTTTTTATA+CGG | - | chr4.4:8601627-8601646 | MS.gene28444:intron | 30.0% |
| !! | TTTGCAACTATTCACTTTTG+AGG | + | chr4.4:8605237-8605256 | None:intergenic | 30.0% |
| !!! | CAGGTTGGTTTTAAAGTTAA+TGG | + | chr4.4:8606467-8606486 | None:intergenic | 30.0% |
| !!! | TAATGGTTTTGTTATGGCTA+TGG | + | chr4.4:8602211-8602230 | None:intergenic | 30.0% |
| !!! | TGGTTTTAAAGTTAATGGTG+TGG | + | chr4.4:8606462-8606481 | None:intergenic | 30.0% |
| !!! | TGTTAGGTTTTGAGTTTATC+TGG | - | chr4.4:8601896-8601915 | MS.gene28444:intron | 30.0% |
| !!! | TTAACTTGCATTGACTTTTG+TGG | - | chr4.4:8605904-8605923 | MS.gene28444:intron | 30.0% |
| !!! | TTGTTTTTGTTACAACAACC+TGG | + | chr4.4:8607014-8607033 | None:intergenic | 30.0% |
| !!! | TTTTGAGTTTCATTGGAGAA+AGG | - | chr4.4:8601315-8601334 | MS.gene28444:intron | 30.0% |
| AAAATCAGAATAGCCACCAT+AGG | + | chr4.4:8606128-8606147 | None:intergenic | 35.0% | |
| AAACCATTTCCACAGCAAAA+TGG | - | chr4.4:8602163-8602182 | MS.gene28444:intron | 35.0% | |
| AAACCATTTCGACAGCAAAA+TGG | - | chr4.4:8602120-8602139 | MS.gene28444:intron | 35.0% | |
| AAAGTAAAGATGCTCATCCA+CGG | + | chr4.4:8604030-8604049 | None:intergenic | 35.0% | |
| AACCTTCGAGAGAAATGAAA+GGG | + | chr4.4:8604231-8604250 | None:intergenic | 35.0% | |
| CATGATTAAAAACAGGTAGG+TGG | + | chr4.4:8605167-8605186 | None:intergenic | 35.0% | |
| CCCTTTATAAGGAGAGTTAT+AGG | + | chr4.4:8606098-8606117 | None:intergenic | 35.0% | |
| CTGTGTTACAAATGAAGTCT+AGG | - | chr4.4:8605583-8605602 | MS.gene28444:intron | 35.0% | |
| CTTTCATTTACGGTTATGGA+CGG | - | chr4.4:8601659-8601678 | MS.gene28444:intron | 35.0% | |
| CTTTCTACACCCAACTTATT+AGG | + | chr4.4:8603691-8603710 | None:intergenic | 35.0% | |
| GGAGAGTTATAGGTAAATAC+AGG | + | chr4.4:8606088-8606107 | None:intergenic | 35.0% | |
| GGAGTTTCAACTAACAAGAA+AGG | - | chr4.4:8601712-8601731 | MS.gene28444:intron | 35.0% | |
| GGTGTAGAATGCAATTATGT+TGG | - | chr4.4:8603784-8603803 | MS.gene28444:intron | 35.0% | |
| GTATGACATAATCATCAAGC+AGG | + | chr4.4:8604747-8604766 | None:intergenic | 35.0% | |
| GTCAAGTGTGATTTAAGTGT+GGG | + | chr4.4:8606734-8606753 | None:intergenic | 35.0% | |
| GTTAGAGAGAGAAATGAGTA+TGG | + | chr4.4:8602481-8602500 | None:intergenic | 35.0% | |
| GTTTCATTGGAGAAAGGATT+TGG | - | chr4.4:8601321-8601340 | MS.gene28444:intron | 35.0% | |
| TACCGAATTTGATTGCAACA+TGG | + | chr4.4:8606315-8606334 | None:intergenic | 35.0% | |
| TACTTTGCAACTATGAAGCA+CGG | + | chr4.4:8605412-8605431 | None:intergenic | 35.0% | |
| TATTAGTACCTCTCCAAACA+AGG | - | chr4.4:8606360-8606379 | MS.gene28444:intron | 35.0% | |
| TATTATGGTATGACTGAACC+AGG | - | chr4.4:8606253-8606272 | MS.gene28444:intron | 35.0% | |
| TGTCAAGTGTGATTTAAGTG+TGG | + | chr4.4:8606735-8606754 | None:intergenic | 35.0% | |
| TTCATTGGAGAAAGGATTTG+GGG | - | chr4.4:8601323-8601342 | MS.gene28444:intron | 35.0% | |
| TTCTTTACCCCTCAAATTAG+AGG | - | chr4.4:8604634-8604653 | MS.gene28444:intron | 35.0% | |
| TTGAAACTCCTATGATACAG+TGG | + | chr4.4:8601702-8601721 | None:intergenic | 35.0% | |
| TTGGTCTACTGAAGTTGAAT+GGG | - | chr4.4:8607162-8607181 | MS.gene28444:intron | 35.0% | |
| ! | AATTTTATGCAGGCTGCTAT+GGG | - | chr4.4:8607083-8607102 | MS.gene28444:intron | 35.0% |
| ! | ATTGTGAATGGATTCGTGTT+AGG | - | chr4.4:8601880-8601899 | MS.gene28444:intron | 35.0% |
| ! | CTGTGAATGAATTGGTGATT+GGG | + | chr4.4:8601041-8601060 | None:intergenic | 35.0% |
| ! | GTGATGAGTGTTATTGTGAA+TGG | - | chr4.4:8601868-8601887 | MS.gene28444:intron | 35.0% |
| ! | GTTTCAAAACCATTTTGCTG+TGG | + | chr4.4:8602175-8602194 | None:intergenic | 35.0% |
| ! | TATAGCCCGATGAAGTATTA+TGG | - | chr4.4:8606238-8606257 | MS.gene28444:intron | 35.0% |
| ! | TCACTGCAGTTTTCTATCTT+TGG | - | chr4.4:8605727-8605746 | MS.gene28444:intron | 35.0% |
| ! | TCTGTGAATGAATTGGTGAT+TGG | + | chr4.4:8601042-8601061 | None:intergenic | 35.0% |
| ! | TGTTTCTACCACTGTATCAT+AGG | - | chr4.4:8601691-8601710 | MS.gene28444:intron | 35.0% |
| ! | TTTCGACAGCAAAATGGTTT+TGG | - | chr4.4:8602126-8602145 | MS.gene28444:intron | 35.0% |
| ! | TTTTGCAGGCATGAAATTGT+TGG | - | chr4.4:8605932-8605951 | MS.gene28444:intron | 35.0% |
| !! | AAACCATTTTGCTGTCGAAA+TGG | + | chr4.4:8602126-8602145 | None:intergenic | 35.0% |
| !! | AAACCATTTTGCTGTGGAAA+TGG | + | chr4.4:8602169-8602188 | None:intergenic | 35.0% |
| !! | ATATCGGTTTGTGATTGATG+TGG | - | chr4.4:8607630-8607649 | MS.gene28444:CDS | 35.0% |
| !! | CCAGAAATTTTGAAAACTGG+GGG | + | chr4.4:8606817-8606836 | None:intergenic | 35.0% |
| !! | TGAGTGTTGATTCTATTAGG+TGG | - | chr4.4:8604003-8604022 | MS.gene28444:intron | 35.0% |
| AAAACCAACCTGTTTCGTCT+AGG | - | chr4.4:8606475-8606494 | MS.gene28444:intron | 40.0% | |
| AAAGATGGTCCATATTTGGC+CGG | - | chr4.4:8603954-8603973 | MS.gene28444:intron | 40.0% | |
| AAAGCTATGAAGCACGGATA+CGG | - | chr4.4:8605254-8605273 | MS.gene28444:intron | 40.0% | |
| AAAGTTTCCGCTTCTAGATC+GGG | + | chr4.4:8605708-8605727 | None:intergenic | 40.0% | |
| AACCTCCACCTCTAATTTGA+GGG | + | chr4.4:8604645-8604664 | None:intergenic | 40.0% | |
| ACAATTATGCACGGTGCATA+AGG | - | chr4.4:8603816-8603835 | MS.gene28444:intron | 40.0% | |
| ACACACTCTCAAGAACGATT+GGG | - | chr4.4:8604402-8604421 | MS.gene28444:intron | 40.0% | |
| ACAGAACTGAATGATGGCAA+TGG | - | chr4.4:8601993-8602012 | MS.gene28444:intron | 40.0% | |
| ACATGGGCCAATAGTTTACT+AGG | + | chr4.4:8605540-8605559 | None:intergenic | 40.0% | |
| ACTGAACCAGGCAAACATTT+GGG | - | chr4.4:8606265-8606284 | MS.gene28444:intron | 40.0% | |
| ACTGAAGTTGAATGGGAAAC+TGG | - | chr4.4:8607169-8607188 | MS.gene28444:intron | 40.0% | |
| AGGTAAAACCAGGACATCTT+TGG | - | chr4.4:8605879-8605898 | MS.gene28444:intron | 40.0% | |
| AGTTAATCCCAAAGATGTCC+TGG | + | chr4.4:8605890-8605909 | None:intergenic | 40.0% | |
| AGTTGCAAAGCTATGAAGCA+CGG | - | chr4.4:8605248-8605267 | MS.gene28444:intron | 40.0% | |
| ATAACCTAGACGAAACAGGT+TGG | + | chr4.4:8606482-8606501 | None:intergenic | 40.0% | |
| ATAATAGCAGCTGAGATCGA+TGG | - | chr4.4:8604131-8604150 | MS.gene28444:intron | 40.0% | |
| ATACATACCCAGGAACAACA+GGG | + | chr4.4:8604441-8604460 | None:intergenic | 40.0% | |
| ATACTTCATCGGGCTATACA+CGG | + | chr4.4:8606236-8606255 | None:intergenic | 40.0% | |
| ATCAGCACCAAGTTTGTCAA+TGG | + | chr4.4:8606395-8606414 | None:intergenic | 40.0% | |
| ATGTCTAATGTCTTGACTGC+AGG | - | chr4.4:8607451-8607470 | MS.gene28444:CDS | 40.0% | |
| CAAAGACCCTGAGAAAATGA+AGG | - | chr4.4:8606429-8606448 | MS.gene28444:intron | 40.0% | |
| CAACTAAATGGGAGTGGTTA+TGG | + | chr4.4:8603846-8603865 | None:intergenic | 40.0% | |
| CAACTCACAGAACTGAATGA+TGG | - | chr4.4:8601987-8602006 | MS.gene28444:intron | 40.0% | |
| CAATATTCCCGATCTAGAAG+CGG | - | chr4.4:8605698-8605717 | MS.gene28444:intron | 40.0% | |
| CACTGCAAAGACTGGAAATA+AGG | - | chr4.4:8605642-8605661 | MS.gene28444:intron | 40.0% | |
| CTACAAACTTGAGAAGGAGT+TGG | + | chr4.4:8607656-8607675 | None:intergenic | 40.0% | |
| CTTGGTCTACTGAAGTTGAA+TGG | - | chr4.4:8607161-8607180 | MS.gene28444:intron | 40.0% | |
| GAAAGTTTCCGCTTCTAGAT+CGG | + | chr4.4:8605709-8605728 | None:intergenic | 40.0% | |
| GAACCTTCGAGAGAAATGAA+AGG | + | chr4.4:8604232-8604251 | None:intergenic | 40.0% | |
| GAAGGAGGTAGACTTAAAGA+TGG | - | chr4.4:8603939-8603958 | MS.gene28444:intron | 40.0% | |
| GAGGCTTTCATTTACGGTTA+TGG | - | chr4.4:8601655-8601674 | MS.gene28444:intron | 40.0% | |
| GATGGTTTACCTGCAACTAA+TGG | + | chr4.4:8607239-8607258 | None:intergenic | 40.0% | |
| GGCAAAGAGAGAATAAGTGT+AGG | + | chr4.4:8606713-8606732 | None:intergenic | 40.0% | |
| GGCCATGTTGCAATCAAATT+CGG | - | chr4.4:8606310-8606329 | MS.gene28444:intron | 40.0% | |
| GGTAAAACCAGGACATCTTT+GGG | - | chr4.4:8605880-8605899 | MS.gene28444:intron | 40.0% | |
| GTCACAGATGTAGGCAAAAT+TGG | - | chr4.4:8606925-8606944 | MS.gene28444:intron | 40.0% | |
| GTGATTTCACAAATGTCTCG+AGG | + | chr4.4:8603887-8603906 | None:intergenic | 40.0% | |
| GTTGCTGAGGCTTTCATTTA+CGG | - | chr4.4:8601649-8601668 | MS.gene28444:intron | 40.0% | |
| TACACACTCTCAAGAACGAT+TGG | - | chr4.4:8604401-8604420 | MS.gene28444:intron | 40.0% | |
| TACGTAACGTAACTCTCTAC+CGG | + | chr4.4:8603976-8603995 | None:intergenic | 40.0% | |
| TAGGTTCGTGTCCCTTTATA+AGG | + | chr4.4:8606109-8606128 | None:intergenic | 40.0% | |
| TATAAAGGGACACGAACCTA+TGG | - | chr4.4:8606109-8606128 | MS.gene28444:intron | 40.0% | |
| TCACTTCAACTAACTAGGAG+TGG | - | chr4.4:8603903-8603922 | MS.gene28444:intron | 40.0% | |
| TCTGTCTTTCCATTAGTTGC+AGG | - | chr4.4:8607227-8607246 | MS.gene28444:intron | 40.0% | |
| TGGAAATGGTTTCTGTGAGT+TGG | + | chr4.4:8602155-8602174 | None:intergenic | 40.0% | |
| TGGCTATGGTTTATGTGAGT+TGG | + | chr4.4:8602197-8602216 | None:intergenic | 40.0% | |
| TGTCTACAACTAAATGGGAG+TGG | + | chr4.4:8603852-8603871 | None:intergenic | 40.0% | |
| TGTGTCTATGATGTAGTCCA+TGG | + | chr4.4:8607111-8607130 | None:intergenic | 40.0% | |
| TTTACCCCTCAAATTAGAGG+TGG | - | chr4.4:8604637-8604656 | MS.gene28444:intron | 40.0% | |
| ! | ATTTTGTGGTTGTTCACCAG+CGG | - | chr4.4:8606143-8606162 | MS.gene28444:intron | 40.0% |
| ! | CAATTTTATGCAGGCTGCTA+TGG | - | chr4.4:8607082-8607101 | MS.gene28444:intron | 40.0% |
| ! | CCCCCAGTTTTCAAAATTTC+TGG | - | chr4.4:8606814-8606833 | MS.gene28444:intron | 40.0% |
| ! | CTGAATGATGGCAATGGTTT+TGG | - | chr4.4:8601999-8602018 | MS.gene28444:intron | 40.0% |
| ! | CTGCAGTTTTCTATCTTTGG+AGG | - | chr4.4:8605730-8605749 | MS.gene28444:intron | 40.0% |
| ! | CTTCATTTTCTCAGGGTCTT+TGG | + | chr4.4:8606431-8606450 | None:intergenic | 40.0% |
| ! | CTTTTGTGGTTGTGTTTTGC+AGG | - | chr4.4:8605918-8605937 | MS.gene28444:intron | 40.0% |
| ! | GGTGTTATCAATGCTAGTGA+AGG | - | chr4.4:8601221-8601240 | MS.gene28444:intron | 40.0% |
| ! | TGGTGGCTATTCTGATTTTG+TGG | - | chr4.4:8606129-8606148 | MS.gene28444:intron | 40.0% |
| !! | AAAAGCTTTGAGTGGGAGTT+CGG | + | chr4.4:8604172-8604191 | None:intergenic | 40.0% |
| AAATCAACACGGCCATGGAA+AGG | - | chr4.4:8607587-8607606 | MS.gene28444:CDS | 45.0% | |
| AACTCTCTACCGGCCAAATA+TGG | + | chr4.4:8603966-8603985 | None:intergenic | 45.0% | |
| AACTCTGCAGTCACAGATGT+AGG | - | chr4.4:8606916-8606935 | MS.gene28444:intron | 45.0% | |
| AACTTCAGTAGACCAAGCAG+TGG | + | chr4.4:8607158-8607177 | None:intergenic | 45.0% | |
| AATGGGAAACTGGTCACTGT+AGG | - | chr4.4:8607179-8607198 | MS.gene28444:intron | 45.0% | |
| ACCTCCACCTCTAATTTGAG+GGG | + | chr4.4:8604644-8604663 | None:intergenic | 45.0% | |
| ACTACTTACCCTGTTGTTCC+TGG | - | chr4.4:8604430-8604449 | MS.gene28444:intron | 45.0% | |
| ACTGAGGCCATTGACAAACT+TGG | - | chr4.4:8606385-8606404 | MS.gene28444:intron | 45.0% | |
| AGTGGCAGTTAGATGAGTGA+AGG | - | chr4.4:8603921-8603940 | MS.gene28444:intron | 45.0% | |
| ATGCATGTGTGATGTGGTGT+GGG | - | chr4.4:8606608-8606627 | MS.gene28444:intron | 45.0% | |
| ATGGAAAGACAGAGAGCTCA+AGG | + | chr4.4:8607220-8607239 | None:intergenic | 45.0% | |
| ATGGCCTCAGTTTCCTTGTT+TGG | + | chr4.4:8606376-8606395 | None:intergenic | 45.0% | |
| ATGGGAAACTGGTCACTGTA+GGG | - | chr4.4:8607180-8607199 | MS.gene28444:intron | 45.0% | |
| ATTTACGGTTATGGACGGAC+TGG | - | chr4.4:8601664-8601683 | MS.gene28444:intron | 45.0% | |
| CAACCTCCACCTCTAATTTG+AGG | + | chr4.4:8604646-8604665 | None:intergenic | 45.0% | |
| CACACTCTCAAGAACGATTG+GGG | - | chr4.4:8604403-8604422 | MS.gene28444:intron | 45.0% | |
| CATACATACCCAGGAACAAC+AGG | + | chr4.4:8604442-8604461 | None:intergenic | 45.0% | |
| CTAATGTCTTGACTGCAGGA+CGG | - | chr4.4:8607455-8607474 | MS.gene28444:CDS | 45.0% | |
| CTACTTACCCTGTTGTTCCT+GGG | - | chr4.4:8604431-8604450 | MS.gene28444:intron | 45.0% | |
| CTCCCTTTCATTTCTCTCGA+AGG | - | chr4.4:8604226-8604245 | MS.gene28444:intron | 45.0% | |
| CTCTCCAAACAAGGAAACTG+AGG | - | chr4.4:8606369-8606388 | MS.gene28444:intron | 45.0% | |
| CTTATCGGAGGGAGTAACAT+TGG | - | chr4.4:8607481-8607500 | MS.gene28444:CDS | 45.0% | |
| GAAACTGAACTACATACCGC+TGG | + | chr4.4:8606162-8606181 | None:intergenic | 45.0% | |
| GAATGAAATCAACACGGCCA+TGG | - | chr4.4:8607582-8607601 | MS.gene28444:CDS | 45.0% | |
| GACTGAACCAGGCAAACATT+TGG | - | chr4.4:8606264-8606283 | MS.gene28444:intron | 45.0% | |
| GAGCATAACCTAGACGAAAC+AGG | + | chr4.4:8606486-8606505 | None:intergenic | 45.0% | |
| GGAAGTGACAGACTCATTCT+TGG | + | chr4.4:8607321-8607340 | None:intergenic | 45.0% | |
| GTTGGCGTTGTGACAAAAGT+TGG | - | chr4.4:8605950-8605969 | MS.gene28444:intron | 45.0% | |
| TATAAATGGGCAGGTCGCTA+GGG | - | chr4.4:8606581-8606600 | MS.gene28444:intron | 45.0% | |
| TGATTCTATTAGGTGGACCG+TGG | - | chr4.4:8604010-8604029 | MS.gene28444:intron | 45.0% | |
| TGGAAAGACAGAGAGCTCAA+GGG | + | chr4.4:8607219-8607238 | None:intergenic | 45.0% | |
| TTATAAATGGGCAGGTCGCT+AGG | - | chr4.4:8606580-8606599 | MS.gene28444:intron | 45.0% | |
| TTCAAGTGCACTGCAAAGAC+TGG | - | chr4.4:8605634-8605653 | MS.gene28444:intron | 45.0% | |
| TTGGAGAAAGGATTTGGGGA+CGG | - | chr4.4:8601327-8601346 | MS.gene28444:intron | 45.0% | |
| TTTGAGTGGGAGTTCGGTTT+CGG | + | chr4.4:8604166-8604185 | None:intergenic | 45.0% | |
| ! | AAATCGCTCCGAGTTGGAAT+CGG | - | chr4.4:8601166-8601185 | MS.gene28444:CDS | 45.0% |
| ! | AGCTTTGTGAAGCCTTTCCA+TGG | + | chr4.4:8607602-8607621 | None:intergenic | 45.0% |
| ! | CTCAGTTTCCTTGTTTGGAG+AGG | + | chr4.4:8606371-8606390 | None:intergenic | 45.0% |
| ! | GAACTCCCACTCAAAGCTTT+TGG | - | chr4.4:8604171-8604190 | MS.gene28444:intron | 45.0% |
| ! | GGGTTTTTATACGGTTGCTG+AGG | - | chr4.4:8601636-8601655 | MS.gene28444:intron | 45.0% |
| ! | TCCCACTCAAAGCTTTTGGT+TGG | - | chr4.4:8604175-8604194 | MS.gene28444:intron | 45.0% |
| ! | TCTCAGGGTCTTTGGAAACA+AGG | + | chr4.4:8606423-8606442 | None:intergenic | 45.0% |
| ! | TCTGTTCGTAAGGGCTTGTT+TGG | + | chr4.4:8605116-8605135 | None:intergenic | 45.0% |
| ! | TTCAGAGTGGGTGATAACGT+TGG | - | chr4.4:8605989-8606008 | MS.gene28444:intron | 45.0% |
| !! | CCCAACCAAAAGCTTTGAGT+GGG | + | chr4.4:8604179-8604198 | None:intergenic | 45.0% |
| !! | CCCACTCAAAGCTTTTGGTT+GGG | - | chr4.4:8604176-8604195 | MS.gene28444:intron | 45.0% |
| !!! | AGTTTTAAAAAATTATAATA+TGG | - | chr4.4:8603712-8603731 | MS.gene28444:intron | 5.0% |
| !!! | ATTAATTTTTATTTTTTGTA+GGG | - | chr4.4:8604318-8604337 | MS.gene28444:CDS | 5.0% |
| !!! | GTTTTAAAAAATTATAATAT+GGG | - | chr4.4:8603713-8603732 | MS.gene28444:intron | 5.0% |
| AAAGGGACACGAACCTATGG+TGG | - | chr4.4:8606112-8606131 | MS.gene28444:intron | 50.0% | |
| ACCAGGCAAACATTTGGGAG+TGG | - | chr4.4:8606270-8606289 | MS.gene28444:intron | 50.0% | |
| ACCCCTCAAATTAGAGGTGG+AGG | - | chr4.4:8604640-8604659 | MS.gene28444:intron | 50.0% | |
| ACTGCAGGACGGAAGCTTAT+CGG | - | chr4.4:8607466-8607485 | MS.gene28444:CDS | 50.0% | |
| ATCGGAGGGAGTAACATTGG+AGG | - | chr4.4:8607484-8607503 | MS.gene28444:CDS | 50.0% | |
| CAGGAGATGCTCGATTTCTG+CGG | - | chr4.4:8607520-8607539 | MS.gene28444:CDS | 50.0% | |
| GATGCATGTGTGATGTGGTG+TGG | - | chr4.4:8606607-8606626 | MS.gene28444:intron | 50.0% | |
| GCAAACATTTGGGAGTGGCA+GGG | - | chr4.4:8606275-8606294 | MS.gene28444:intron | 50.0% | |
| GGAAAGACAGAGAGCTCAAG+GGG | + | chr4.4:8607218-8607237 | None:intergenic | 50.0% | |
| GGCAGTTAGATGAGTGAAGG+AGG | - | chr4.4:8603924-8603943 | MS.gene28444:intron | 50.0% | |
| TAGACCAAGCAGTGGCATCA+GGG | + | chr4.4:8607150-8607169 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr4.4:8605401-8605420 | None:intergenic | 50.0% | |
| TCGGAGGGAGTAACATTGGA+GGG | - | chr4.4:8607485-8607504 | MS.gene28444:CDS | 50.0% | |
| TGAAGCACGGATACGGACAT+CGG | - | chr4.4:8605261-8605280 | MS.gene28444:intron | 50.0% | |
| TGAGTCAAATCGCTCCGAGT+TGG | - | chr4.4:8601160-8601179 | MS.gene28444:CDS | 50.0% | |
| TGGAGGGATGAAAGAGACTC+AGG | - | chr4.4:8607501-8607520 | MS.gene28444:CDS | 50.0% | |
| TTGAGTGGGAGTTCGGTTTC+GGG | + | chr4.4:8604165-8604184 | None:intergenic | 50.0% | |
| ! | CGGTAAAGCATTTGGGCTGA+AGG | - | chr4.4:8606330-8606349 | MS.gene28444:intron | 50.0% |
| ! | CTCCGAGTTGGAATCGGTAA+CGG | - | chr4.4:8601172-8601191 | MS.gene28444:CDS | 50.0% |
| ! | GTGGGTGATAACGTTGGTGT+TGG | - | chr4.4:8605995-8606014 | MS.gene28444:intron | 50.0% |
| !! | CTCCGTTACCGATTCCAACT+CGG | + | chr4.4:8601177-8601196 | None:intergenic | 50.0% |
| !! | GAATCGGTAACGGAGAGTAG+TGG | - | chr4.4:8601182-8601201 | MS.gene28444:CDS | 50.0% |
| !! | GCCCAACCAAAAGCTTTGAG+TGG | + | chr4.4:8604180-8604199 | None:intergenic | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+TGG | - | chr4.4:8605339-8605358 | MS.gene28444:intron | 50.0% |
| CAGGACGGAAGCTTATCGGA+GGG | - | chr4.4:8607470-8607489 | MS.gene28444:CDS | 55.0% | |
| CATTCCCTGATGCCACTGCT+TGG | - | chr4.4:8607143-8607162 | MS.gene28444:intron | 55.0% | |
| GACAACTTACCCCTTGACGC+TGG | - | chr4.4:8606184-8606203 | MS.gene28444:intron | 55.0% | |
| GCCACTCCCAAATGTTTGCC+TGG | + | chr4.4:8606274-8606293 | None:intergenic | 55.0% | |
| GCGTCAAGGGGTAAGTTGTC+AGG | + | chr4.4:8606184-8606203 | None:intergenic | 55.0% | |
| GGACGGATGCATGTGTGATG+TGG | - | chr4.4:8606602-8606621 | MS.gene28444:intron | 55.0% | |
| GGCAAACATTTGGGAGTGGC+AGG | - | chr4.4:8606274-8606293 | MS.gene28444:intron | 55.0% | |
| GTAGACCAAGCAGTGGCATC+AGG | + | chr4.4:8607151-8607170 | None:intergenic | 55.0% | |
| TGGGCTGCTAGAGACACTTC+TGG | - | chr4.4:8604195-8604214 | MS.gene28444:intron | 55.0% | |
| ! | AAGTGGAGCACCAGCGTCAA+GGG | + | chr4.4:8606197-8606216 | None:intergenic | 55.0% |
| !! | TGTCGGTGTCGTGTTGGTGT+CGG | - | chr4.4:8605345-8605364 | MS.gene28444:intron | 55.0% |
| AATGGGCAGGTCGCTAGGGA+CGG | - | chr4.4:8606585-8606604 | MS.gene28444:intron | 60.0% | |
| CATTTGGGAGTGGCAGGGCT+TGG | - | chr4.4:8606280-8606299 | MS.gene28444:intron | 60.0% | |
| CGGGCTATACACGGTGATCC+CGG | + | chr4.4:8606227-8606246 | None:intergenic | 60.0% | |
| GACTAGGCGTGTCCTGGTGT+CGG | + | chr4.4:8605379-8605398 | None:intergenic | 60.0% | |
| GCAGGACGGAAGCTTATCGG+AGG | - | chr4.4:8607469-8607488 | MS.gene28444:CDS | 60.0% | |
| GCAGGCTGCTATGGGAACCA+TGG | - | chr4.4:8607091-8607110 | MS.gene28444:intron | 60.0% | |
| GGTGCTCCACTTCTGTGTGC+CGG | - | chr4.4:8606205-8606224 | MS.gene28444:intron | 60.0% | |
| GTGATCCCGGCACACAGAAG+TGG | + | chr4.4:8606214-8606233 | None:intergenic | 60.0% | |
| GTGCTCCACTTCTGTGTGCC+GGG | - | chr4.4:8606206-8606225 | MS.gene28444:intron | 60.0% | |
| ! | AGTGGAGCACCAGCGTCAAG+GGG | + | chr4.4:8606196-8606215 | None:intergenic | 60.0% |
| ! | GAAGTGGAGCACCAGCGTCA+AGG | + | chr4.4:8606198-8606217 | None:intergenic | 60.0% |
| ! | GAGAGCTCAAGGGGCTTGCT+AGG | + | chr4.4:8607209-8607228 | None:intergenic | 60.0% |
| ACCAGGACACGCCTAGTCCG+AGG | - | chr4.4:8605381-8605400 | MS.gene28444:intron | 65.0% | |
| GCACGGACACTCCTCGGACT+AGG | + | chr4.4:8605395-8605414 | None:intergenic | 65.0% | |
| TCGGACACGTGTCCGACACC+AGG | - | chr4.4:8605364-8605383 | MS.gene28444:intron | 65.0% | |
| TTGGGAGTGGCAGGGCTTGG+TGG | - | chr4.4:8606283-8606302 | MS.gene28444:intron | 65.0% | |
| ! | TCCTCGGACTAGGCGTGTCC+TGG | + | chr4.4:8605385-8605404 | None:intergenic | 65.0% |
| ! | TGGGAGTGGCAGGGCTTGGT+GGG | - | chr4.4:8606284-8606303 | MS.gene28444:intron | 65.0% |
| !! | GTGGCAGGGCTTGGTGGGTT+AGG | - | chr4.4:8606289-8606308 | MS.gene28444:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 8601008 | 8607675 | 8601008 | ID=MS.gene28444 |
| chr4.4 | mRNA | 8601008 | 8607675 | 8601008 | ID=MS.gene28444.t1;Parent=MS.gene28444 |
| chr4.4 | exon | 8607383 | 8607675 | 8607383 | ID=MS.gene28444.t1.exon1;Parent=MS.gene28444.t1 |
| chr4.4 | CDS | 8607383 | 8607675 | 8607383 | ID=cds.MS.gene28444.t1;Parent=MS.gene28444.t1 |
| chr4.4 | exon | 8604231 | 8604344 | 8604231 | ID=MS.gene28444.t1.exon2;Parent=MS.gene28444.t1 |
| chr4.4 | CDS | 8604231 | 8604344 | 8604231 | ID=cds.MS.gene28444.t1;Parent=MS.gene28444.t1 |
| chr4.4 | exon | 8602233 | 8602743 | 8602233 | ID=MS.gene28444.t1.exon3;Parent=MS.gene28444.t1 |
| chr4.4 | CDS | 8602233 | 8602743 | 8602233 | ID=cds.MS.gene28444.t1;Parent=MS.gene28444.t1 |
| chr4.4 | exon | 8601435 | 8601588 | 8601435 | ID=MS.gene28444.t1.exon4;Parent=MS.gene28444.t1 |
| chr4.4 | CDS | 8601435 | 8601588 | 8601435 | ID=cds.MS.gene28444.t1;Parent=MS.gene28444.t1 |
| chr4.4 | exon | 8601008 | 8601210 | 8601008 | ID=MS.gene28444.t1.exon5;Parent=MS.gene28444.t1 |
| chr4.4 | CDS | 8601008 | 8601210 | 8601008 | ID=cds.MS.gene28444.t1;Parent=MS.gene28444.t1 |
| Gene Sequence |
| Protein sequence |
