Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048392.t1 | XP_003628882.1 | 95.6 | 360 | 16 | 0 | 1 | 360 | 1 | 360 | 1.90E-194 | 688.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048392.t1 | Q9ZRF1 | 77.8 | 352 | 78 | 0 | 6 | 357 | 4 | 355 | 4.0e-161 | 568.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048392.t1 | G7LIJ2 | 95.6 | 360 | 16 | 0 | 1 | 360 | 1 | 360 | 1.3e-194 | 688.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048392.t1 | MTR_8g068190 | 96.389 | 360 | 13 | 0 | 1 | 360 | 1 | 360 | 0.0 | 666 |
| MS.gene048392.t1 | MTR_5g031190 | 80.278 | 360 | 71 | 0 | 1 | 360 | 1 | 360 | 0.0 | 592 |
| MS.gene048392.t1 | MTR_5g031180 | 83.611 | 360 | 59 | 0 | 1 | 360 | 1 | 360 | 0.0 | 581 |
| MS.gene048392.t1 | MTR_5g031230 | 78.611 | 360 | 77 | 0 | 1 | 360 | 1 | 360 | 0.0 | 575 |
| MS.gene048392.t1 | MTR_5g031390 | 78.889 | 360 | 76 | 0 | 1 | 360 | 1 | 360 | 0.0 | 574 |
| MS.gene048392.t1 | MTR_5g031250 | 77.778 | 360 | 80 | 0 | 1 | 360 | 1 | 360 | 0.0 | 570 |
| MS.gene048392.t1 | MTR_4g115300 | 77.222 | 360 | 82 | 0 | 1 | 360 | 1 | 360 | 0.0 | 563 |
| MS.gene048392.t1 | MTR_5g031310 | 78.249 | 354 | 77 | 0 | 7 | 360 | 8 | 361 | 0.0 | 560 |
| MS.gene048392.t1 | MTR_5g031305 | 77.401 | 354 | 80 | 0 | 7 | 360 | 8 | 361 | 0.0 | 553 |
| MS.gene048392.t1 | MTR_5g031210 | 75.833 | 360 | 87 | 0 | 1 | 360 | 1 | 360 | 0.0 | 546 |
| MS.gene048392.t1 | MTR_5g031300 | 74.576 | 354 | 90 | 0 | 7 | 360 | 8 | 361 | 0.0 | 541 |
| MS.gene048392.t1 | MTR_5g031360 | 76.638 | 351 | 82 | 0 | 10 | 360 | 12 | 362 | 0.0 | 541 |
| MS.gene048392.t1 | MTR_8g092630 | 62.745 | 357 | 127 | 2 | 8 | 359 | 60 | 415 | 1.08e-150 | 431 |
| MS.gene048392.t1 | MTR_5g031430 | 62.535 | 355 | 131 | 1 | 3 | 357 | 5 | 357 | 1.65e-149 | 426 |
| MS.gene048392.t1 | MTR_1g025950 | 59.026 | 349 | 142 | 1 | 8 | 355 | 7 | 355 | 5.70e-138 | 397 |
| MS.gene048392.t1 | MTR_5g031250 | 76.763 | 241 | 56 | 0 | 1 | 241 | 1 | 241 | 1.33e-132 | 379 |
| MS.gene048392.t1 | MTR_1g107425 | 52.770 | 343 | 162 | 0 | 11 | 353 | 9 | 351 | 9.50e-124 | 360 |
| MS.gene048392.t1 | MTR_2g009810 | 53.043 | 345 | 160 | 2 | 14 | 357 | 62 | 405 | 1.36e-115 | 342 |
| MS.gene048392.t1 | MTR_1g107425 | 54.064 | 283 | 129 | 1 | 11 | 293 | 9 | 290 | 2.87e-99 | 296 |
| MS.gene048392.t1 | MTR_2g009820 | 49.398 | 249 | 116 | 3 | 116 | 357 | 8 | 253 | 1.98e-64 | 205 |
| MS.gene048392.t1 | MTR_5g031290 | 76.316 | 114 | 27 | 0 | 247 | 360 | 80 | 193 | 2.34e-56 | 182 |
| MS.gene048392.t1 | MTR_5g031290 | 78.750 | 80 | 16 | 1 | 1 | 79 | 1 | 80 | 1.25e-38 | 136 |
| MS.gene048392.t1 | MTR_8g095220 | 28.452 | 239 | 146 | 5 | 25 | 242 | 68 | 302 | 7.58e-24 | 100 |
| MS.gene048392.t1 | MTR_8g095220 | 27.500 | 280 | 173 | 7 | 25 | 278 | 68 | 343 | 7.91e-24 | 102 |
| MS.gene048392.t1 | MTR_6g466320 | 25.497 | 302 | 201 | 8 | 1 | 290 | 6 | 295 | 3.31e-17 | 82.4 |
| MS.gene048392.t1 | MTR_6g465010 | 25.497 | 302 | 201 | 8 | 1 | 290 | 6 | 295 | 3.31e-17 | 82.4 |
| MS.gene048392.t1 | MTR_6g465010 | 26.259 | 278 | 182 | 7 | 25 | 290 | 13 | 279 | 5.67e-17 | 81.3 |
| MS.gene048392.t1 | MTR_3g089977 | 24.355 | 349 | 225 | 10 | 39 | 354 | 37 | 379 | 2.33e-16 | 80.1 |
| MS.gene048392.t1 | MTR_3g089940 | 24.484 | 339 | 218 | 9 | 39 | 344 | 37 | 370 | 4.45e-16 | 79.0 |
| MS.gene048392.t1 | MTR_3g089940 | 24.484 | 339 | 218 | 9 | 39 | 344 | 37 | 370 | 4.45e-16 | 79.0 |
| MS.gene048392.t1 | MTR_3g089940 | 24.756 | 307 | 201 | 7 | 39 | 319 | 37 | 339 | 5.81e-15 | 75.5 |
| MS.gene048392.t1 | MTR_0001s0660 | 25.166 | 302 | 202 | 10 | 38 | 318 | 35 | 333 | 6.48e-15 | 75.9 |
| MS.gene048392.t1 | MTR_3g089940 | 24.756 | 307 | 201 | 7 | 39 | 319 | 37 | 339 | 7.33e-15 | 75.1 |
| MS.gene048392.t1 | MTR_3g089970 | 23.599 | 339 | 221 | 9 | 39 | 344 | 38 | 371 | 9.06e-14 | 72.4 |
| MS.gene048392.t1 | MTR_1g069430 | 25.959 | 339 | 211 | 11 | 39 | 349 | 36 | 362 | 3.50e-13 | 70.5 |
| MS.gene048392.t1 | MTR_7g099040 | 24.843 | 318 | 204 | 9 | 38 | 327 | 37 | 347 | 8.86e-13 | 69.3 |
| MS.gene048392.t1 | MTR_5g087710 | 25.333 | 300 | 186 | 11 | 39 | 307 | 46 | 338 | 1.40e-12 | 68.6 |
| MS.gene048392.t1 | MTR_3g079180 | 26.263 | 297 | 189 | 11 | 38 | 307 | 40 | 333 | 2.84e-12 | 67.8 |
| MS.gene048392.t1 | MTR_5g031380 | 47.541 | 61 | 26 | 1 | 74 | 134 | 13 | 67 | 4.87e-12 | 62.4 |
| MS.gene048392.t1 | MTR_7g068320 | 26.814 | 317 | 184 | 11 | 39 | 318 | 48 | 353 | 2.88e-11 | 64.7 |
| MS.gene048392.t1 | MTR_3g099460 | 25.231 | 325 | 181 | 12 | 39 | 319 | 37 | 343 | 3.20e-11 | 64.3 |
| MS.gene048392.t1 | MTR_3g099460 | 25.231 | 325 | 181 | 12 | 39 | 319 | 44 | 350 | 3.30e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048392.t1 | AT4G37990 | 74.352 | 347 | 89 | 0 | 11 | 357 | 7 | 353 | 1.38e-176 | 494 |
| MS.gene048392.t1 | AT4G37980 | 72.046 | 347 | 97 | 0 | 11 | 357 | 7 | 353 | 2.49e-175 | 491 |
| MS.gene048392.t1 | AT4G37970 | 65.642 | 358 | 123 | 0 | 3 | 360 | 4 | 361 | 6.49e-175 | 491 |
| MS.gene048392.t1 | AT4G39330 | 63.128 | 358 | 132 | 0 | 1 | 358 | 1 | 358 | 8.13e-167 | 470 |
| MS.gene048392.t1 | AT2G21890 | 62.536 | 347 | 129 | 1 | 12 | 357 | 6 | 352 | 2.45e-158 | 449 |
| MS.gene048392.t1 | AT2G21730 | 62.644 | 348 | 128 | 2 | 12 | 357 | 6 | 353 | 2.99e-157 | 446 |
| MS.gene048392.t1 | AT4G37980 | 71.875 | 288 | 81 | 0 | 11 | 298 | 7 | 294 | 5.46e-138 | 394 |
| MS.gene048392.t1 | AT4G39330 | 64.026 | 303 | 109 | 0 | 1 | 303 | 1 | 303 | 7.08e-138 | 395 |
| MS.gene048392.t1 | AT4G37970 | 64.746 | 295 | 104 | 0 | 3 | 297 | 4 | 298 | 1.10e-137 | 394 |
| MS.gene048392.t1 | AT3G19450 | 52.890 | 346 | 163 | 0 | 11 | 356 | 9 | 354 | 5.71e-113 | 333 |
| MS.gene048392.t1 | AT4G37970 | 64.609 | 243 | 86 | 0 | 3 | 245 | 4 | 246 | 2.72e-111 | 325 |
| MS.gene048392.t1 | AT1G72680 | 50.291 | 344 | 166 | 2 | 16 | 357 | 14 | 354 | 4.73e-111 | 328 |
| MS.gene048392.t1 | AT4G37970 | 65.000 | 240 | 84 | 0 | 3 | 242 | 4 | 243 | 3.38e-110 | 322 |
| MS.gene048392.t1 | AT4G34230 | 52.161 | 347 | 166 | 0 | 7 | 353 | 4 | 350 | 1.80e-105 | 314 |
| MS.gene048392.t1 | AT4G34230 | 51.873 | 347 | 167 | 0 | 7 | 353 | 4 | 350 | 1.63e-104 | 311 |
| MS.gene048392.t1 | AT5G63620 | 27.857 | 280 | 172 | 9 | 25 | 278 | 70 | 345 | 5.24e-23 | 99.8 |
| MS.gene048392.t1 | AT5G63620 | 27.857 | 280 | 172 | 9 | 25 | 278 | 70 | 345 | 5.55e-23 | 99.8 |
| MS.gene048392.t1 | AT5G63620 | 29.237 | 236 | 142 | 7 | 28 | 242 | 73 | 304 | 2.47e-22 | 96.3 |
| MS.gene048392.t1 | AT1G22430 | 27.554 | 323 | 194 | 11 | 39 | 329 | 42 | 356 | 2.79e-18 | 85.9 |
| MS.gene048392.t1 | AT1G22430 | 27.554 | 323 | 194 | 11 | 39 | 329 | 42 | 356 | 2.79e-18 | 85.9 |
| MS.gene048392.t1 | AT5G51970 | 26.966 | 267 | 174 | 6 | 36 | 290 | 40 | 297 | 5.86e-18 | 84.7 |
| MS.gene048392.t1 | AT5G51970 | 26.966 | 267 | 174 | 6 | 36 | 290 | 40 | 297 | 5.86e-18 | 84.7 |
| MS.gene048392.t1 | AT1G64710 | 26.299 | 308 | 196 | 10 | 39 | 318 | 13 | 317 | 9.60e-17 | 80.9 |
| MS.gene048392.t1 | AT1G64710 | 26.557 | 305 | 193 | 10 | 39 | 315 | 36 | 337 | 1.33e-16 | 80.9 |
| MS.gene048392.t1 | AT1G32780 | 26.235 | 324 | 183 | 10 | 39 | 318 | 37 | 348 | 3.26e-16 | 79.7 |
| MS.gene048392.t1 | AT5G43940 | 26.647 | 334 | 208 | 11 | 39 | 343 | 36 | 361 | 8.18e-16 | 78.6 |
| MS.gene048392.t1 | AT5G43940 | 26.126 | 333 | 211 | 10 | 39 | 343 | 48 | 373 | 9.62e-16 | 78.2 |
| MS.gene048392.t1 | AT4G22110 | 26.036 | 338 | 208 | 13 | 39 | 343 | 43 | 371 | 5.34e-15 | 75.9 |
| MS.gene048392.t1 | AT4G22110 | 26.036 | 338 | 208 | 13 | 39 | 343 | 43 | 371 | 5.34e-15 | 75.9 |
| MS.gene048392.t1 | AT1G22430 | 28.431 | 204 | 117 | 7 | 39 | 219 | 42 | 239 | 3.69e-13 | 69.7 |
| MS.gene048392.t1 | AT1G22430 | 28.431 | 204 | 117 | 7 | 39 | 219 | 42 | 239 | 6.26e-13 | 68.9 |
| MS.gene048392.t1 | AT1G22430 | 28.431 | 204 | 117 | 7 | 39 | 219 | 42 | 239 | 6.26e-13 | 68.9 |
| MS.gene048392.t1 | AT1G77120 | 23.121 | 346 | 233 | 11 | 39 | 354 | 36 | 378 | 1.80e-12 | 68.2 |
| MS.gene048392.t1 | AT5G42250 | 23.647 | 351 | 228 | 14 | 39 | 354 | 45 | 390 | 2.91e-12 | 67.8 |
Find 91 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGCCCTTTGAAATATTT+TGG | 0.088605 | 8.3:+35187478 | MS.gene048392:CDS |
| TGCCAATCCAAAAGCCTTTC+TGG | 0.129169 | 8.3:-35184832 | None:intergenic |
| TATCGATTTGTTATTGATAT+TGG | 0.153239 | 8.3:+35188613 | MS.gene048392:CDS |
| GCTGAAACAACTTCAATTTC+AGG | 0.167472 | 8.3:-35188541 | None:intergenic |
| ACCAGTATTTCCTTTACTTA+TGG | 0.193639 | 8.3:+35188203 | MS.gene048392:CDS |
| AAGGAAGCTATTGAACTTCT+TGG | 0.242501 | 8.3:+35187625 | MS.gene048392:CDS |
| GATAAACCCAACTTGCAATT+AGG | 0.255697 | 8.3:+35187505 | MS.gene048392:CDS |
| ATCGATTTGTTATTGATATT+GGG | 0.266248 | 8.3:+35188614 | MS.gene048392:CDS |
| CCAGTATTTCCTTTACTTAT+GGG | 0.270076 | 8.3:+35188204 | MS.gene048392:CDS |
| GTGAAATTTGCTAAAGCTTT+TGG | 0.271062 | 8.3:+35187562 | MS.gene048392:CDS |
| CATCCTCTGTTACCTTTGAT+TGG | 0.290815 | 8.3:+35188120 | MS.gene048392:CDS |
| TCTTGGTGGACTTGGTCATA+TGG | 0.309264 | 8.3:+35187537 | MS.gene048392:CDS |
| GAGCATCCCAGAAAGGCTTT+TGG | 0.318869 | 8.3:+35184825 | MS.gene048392:CDS |
| ATAATAGGAGGGAGTTTGAT+TGG | 0.322170 | 8.3:+35188463 | MS.gene048392:CDS |
| GTGGTTGGTCTTGGTGGACT+TGG | 0.333076 | 8.3:+35187529 | MS.gene048392:CDS |
| CAATTAGGTGTGGTTGGTCT+TGG | 0.351500 | 8.3:+35187520 | MS.gene048392:CDS |
| CCCATAAGTAAAGGAAATAC+TGG | 0.359854 | 8.3:-35188204 | None:intergenic |
| TCATGTACATGCAGGGAAAC+TGG | 0.360123 | 8.3:+35185441 | MS.gene048392:intron |
| GATAGTGCCATCGAGATTCT+TGG | 0.367052 | 8.3:-35187341 | None:intergenic |
| CAGCTCCTCTCCTCTGCGCC+GGG | 0.383707 | 8.3:+35187446 | MS.gene048392:CDS |
| GCATCAAGAGGTAGGCCATT+TGG | 0.389427 | 8.3:-35187421 | None:intergenic |
| TTTGTAGGGAGAAAGATAAT+AGG | 0.392960 | 8.3:+35188448 | MS.gene048392:intron |
| TTTCTGGGATGCTCCAACTC+TGG | 0.395683 | 8.3:-35184816 | None:intergenic |
| CTTTCTATTTAGGCTGCAAC+AGG | 0.398392 | 8.3:+35188060 | MS.gene048392:intron |
| ACCACACCTAATTGCAAGTT+GGG | 0.399467 | 8.3:-35187511 | None:intergenic |
| TCAGTTTACCCCGTAGTGCC+TGG | 0.403783 | 8.3:+35185546 | MS.gene048392:CDS |
| TTCAGGTTTCACGTCGTGTT+TGG | 0.404812 | 8.3:-35188524 | None:intergenic |
| GCAGCTCCTCTCCTCTGCGC+CGG | 0.408742 | 8.3:+35187445 | MS.gene048392:CDS |
| ATCTCATGGAAAACTTGTTA+TGG | 0.410782 | 8.3:+35188152 | MS.gene048392:CDS |
| TTAGGTGTGGTTGGTCTTGG+TGG | 0.411892 | 8.3:+35187523 | MS.gene048392:CDS |
| GGAAATACTGGTAGCTCTAA+AGG | 0.416356 | 8.3:-35188192 | None:intergenic |
| GCAACTTTGGCATGAGTGGC+AGG | 0.428464 | 8.3:-35187269 | None:intergenic |
| GAGTTTGATTGGAGGAATCA+AGG | 0.431669 | 8.3:+35188474 | MS.gene048392:CDS |
| CTCGATGGCACTATCACATA+TGG | 0.432086 | 8.3:+35187349 | MS.gene048392:CDS |
| GGTAGCTCTAAAGGCTTCTC+AGG | 0.438289 | 8.3:-35188183 | None:intergenic |
| TTCACATGTTGAAGAATGAA+TGG | 0.438459 | 8.3:+35185517 | MS.gene048392:CDS |
| AATGGCAATTTCACCAGAGT+TGG | 0.450828 | 8.3:+35184803 | None:intergenic |
| GCCAATCCAAAAGCCTTTCT+GGG | 0.455038 | 8.3:-35184831 | None:intergenic |
| CTTTGCAACTTTGGCATGAG+TGG | 0.466853 | 8.3:-35187273 | None:intergenic |
| CAAGCCCAAAATATTTCAAA+GGG | 0.475361 | 8.3:-35187483 | None:intergenic |
| ATAACATACCCAGGCACTAC+GGG | 0.480514 | 8.3:-35185555 | None:intergenic |
| TCACATGTTGAAGAATGAAT+GGG | 0.480850 | 8.3:+35185518 | MS.gene048392:CDS |
| GTAGGGAGAAAGATAATAGG+AGG | 0.481996 | 8.3:+35188451 | MS.gene048392:intron |
| AACTCTGGTGAAATTGCCAT+TGG | 0.485026 | 8.3:-35184801 | None:intergenic |
| TCAAGCCCAAAATATTTCAA+AGG | 0.485606 | 8.3:-35187484 | None:intergenic |
| TTACCTTCTTGAGAAGTTGA+AGG | 0.488313 | 8.3:-35184883 | None:intergenic |
| CAATCAAAGGTAACAGAGGA+TGG | 0.496790 | 8.3:-35188119 | None:intergenic |
| CAAGGTAGGTGTTGGGTGCA+TGG | 0.501965 | 8.3:+35187240 | MS.gene048392:CDS |
| TTGGCAGCTAGGGACTCATC+TGG | 0.512691 | 8.3:+35184849 | MS.gene048392:CDS |
| GTTGGAGACAAGGTAGGTGT+TGG | 0.517373 | 8.3:+35187232 | MS.gene048392:CDS |
| AACTTGCAATTAGGTGTGGT+TGG | 0.521760 | 8.3:+35187514 | MS.gene048392:CDS |
| ATAGGAGGGAGTTTGATTGG+AGG | 0.523692 | 8.3:+35188466 | MS.gene048392:CDS |
| AACCACACCTAATTGCAAGT+TGG | 0.524415 | 8.3:-35187512 | None:intergenic |
| CAGTTTACCCCGTAGTGCCT+GGG | 0.533828 | 8.3:+35185547 | MS.gene048392:CDS |
| AGGGCTATACACTGTGATCC+CGG | 0.534794 | 8.3:-35187464 | None:intergenic |
| CTCCCTTCAACTTCTCAAGA+AGG | 0.539989 | 8.3:+35184880 | MS.gene048392:CDS |
| TACCTTCTTGAGAAGTTGAA+GGG | 0.540236 | 8.3:-35184882 | None:intergenic |
| GCTGCAACAGGCACCTTGGA+TGG | 0.540522 | 8.3:+35188072 | MS.gene048392:CDS |
| TAGGGAGAAAGATAATAGGA+GGG | 0.544083 | 8.3:+35188452 | MS.gene048392:intron |
| TTAGGCTGCAACAGGCACCT+TGG | 0.546046 | 8.3:+35188068 | MS.gene048392:intron |
| TTGGAGACAAGGTAGGTGTT+GGG | 0.547159 | 8.3:+35187233 | MS.gene048392:CDS |
| TGATTATGTCAACACTGCGT+TGG | 0.557331 | 8.3:+35188564 | MS.gene048392:CDS |
| TTTGTGATCAGCATTCCAAA+TGG | 0.562040 | 8.3:+35187406 | MS.gene048392:CDS |
| ATGTGCTTACCCATAAGTAA+AGG | 0.562578 | 8.3:-35188213 | None:intergenic |
| CATGGAAAACTTGTTATGGT+TGG | 0.563073 | 8.3:+35188156 | MS.gene048392:CDS |
| GTGATCCCGGCGCAGAGGAG+AGG | 0.564629 | 8.3:-35187451 | None:intergenic |
| CACTGAACAAGATCAAATGC+AGG | 0.568812 | 8.3:+35187669 | MS.gene048392:CDS |
| AATAACATACCCAGGCACTA+CGG | 0.581739 | 8.3:-35185556 | None:intergenic |
| TTCGTCGGCGACCATTGTGT+CGG | 0.587730 | 8.3:-35187380 | None:intergenic |
| GAGCTGCAGCATCAAGAGGT+AGG | 0.588338 | 8.3:-35187429 | None:intergenic |
| AGAGTTGGAGCATCCCAGAA+AGG | 0.605159 | 8.3:+35184818 | MS.gene048392:CDS |
| ACCCAACTTGCAATTAGGTG+TGG | 0.608390 | 8.3:+35187510 | MS.gene048392:CDS |
| AGAGGAGCTGCAGCATCAAG+AGG | 0.616495 | 8.3:-35187433 | None:intergenic |
| AAATGTAGGCATGAGATCGT+AGG | 0.620757 | 8.3:+35187169 | MS.gene048392:intron |
| CAAAGGTAACAGAGGATGGG+TGG | 0.628958 | 8.3:-35188115 | None:intergenic |
| AATCAAAGGTAACAGAGGAT+GGG | 0.635351 | 8.3:-35188118 | None:intergenic |
| TTCAAAGTTGGAGACAAGGT+AGG | 0.645124 | 8.3:+35187226 | MS.gene048392:CDS |
| GCTGATCACAAAGCTTTCGT+CGG | 0.648568 | 8.3:-35187395 | None:intergenic |
| TATGGTTCCAAGAATCTCGA+TGG | 0.649559 | 8.3:+35187334 | MS.gene048392:CDS |
| GTAGGCGAAGTAACAGAGGT+AGG | 0.651976 | 8.3:+35187187 | MS.gene048392:CDS |
| AGACCAATCAAAGGTAACAG+AGG | 0.653521 | 8.3:-35188123 | None:intergenic |
| GATCGTAGGCGAAGTAACAG+AGG | 0.654571 | 8.3:+35187183 | MS.gene048392:CDS |
| ACACTGTGATCCCGGCGCAG+AGG | 0.659032 | 8.3:-35187456 | None:intergenic |
| AAAATTCAAAGTTGGAGACA+AGG | 0.659045 | 8.3:+35187222 | MS.gene048392:CDS |
| AGTAACAGAGGTAGGAAACA+AGG | 0.663457 | 8.3:+35187195 | MS.gene048392:CDS |
| TGTGTCAATGATGCCATCCA+AGG | 0.670735 | 8.3:-35188085 | None:intergenic |
| CACATGTTGAAGAATGAATG+GGG | 0.671149 | 8.3:+35185519 | MS.gene048392:CDS |
| GATTTCAAAAGACCAATCAA+AGG | 0.671523 | 8.3:-35188132 | None:intergenic |
| TGGAGGCTACTCCGACACAA+TGG | 0.673566 | 8.3:+35187369 | MS.gene048392:CDS |
| GATGGCACTATCACATATGG+AGG | 0.689407 | 8.3:+35187352 | MS.gene048392:CDS |
| TAACATACCCAGGCACTACG+GGG | 0.727459 | 8.3:-35185554 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTTCAAAAAAATATTA+AGG | + | chr8.3:35185891-35185910 | MS.gene048392:intron | 10.0% |
| !! | ATAGATATTAGTAATAAAAA+AGG | + | chr8.3:35186441-35186460 | MS.gene048392:intron | 10.0% |
| !! | ATGTTTCAAAAAAATATTAA+GGG | + | chr8.3:35185892-35185911 | MS.gene048392:intron | 10.0% |
| !! | TAAATGAATAAATAAATACA+TGG | - | chr8.3:35187998-35188017 | None:intergenic | 10.0% |
| !! | TAGATATTAGTAATAAAAAA+GGG | + | chr8.3:35186442-35186461 | MS.gene048392:intron | 10.0% |
| !! | TTTAATAAATTAATATGTAG+TGG | + | chr8.3:35186560-35186579 | MS.gene048392:intron | 10.0% |
| !!! | TAGATTTTGTTTAATTTTTA+GGG | + | chr8.3:35187903-35187922 | MS.gene048392:intron | 10.0% |
| !! | ACAAAAAAAAACTAATTTAG+TGG | + | chr8.3:35186854-35186873 | MS.gene048392:intron | 15.0% |
| !! | AGATATTAGTAATAAAAAAG+GGG | + | chr8.3:35186443-35186462 | MS.gene048392:intron | 15.0% |
| !! | CAAAAAAAAACTAATTTAGT+GGG | + | chr8.3:35186855-35186874 | MS.gene048392:intron | 15.0% |
| !! | GAGTCTATTAATTTAATATT+TGG | + | chr8.3:35185333-35185352 | MS.gene048392:intron | 15.0% |
| !! | TAAAATAAAAAATGGAGAAA+TGG | - | chr8.3:35184909-35184928 | None:intergenic | 15.0% |
| !! | TCTATTAATTTAATATTTGG+AGG | + | chr8.3:35185336-35185355 | MS.gene048392:intron | 15.0% |
| !!! | AAAAATATTAAGGGTATTTT+TGG | + | chr8.3:35185901-35185920 | MS.gene048392:intron | 15.0% |
| !!! | ATCAATTTTTGTTTTCTTTT+TGG | + | chr8.3:35187742-35187761 | MS.gene048392:intron | 15.0% |
| !!! | CATTAACTTTTTAGTTTTTT+TGG | - | chr8.3:35185138-35185157 | None:intergenic | 15.0% |
| !!! | CTAGATTTTGTTTAATTTTT+AGG | + | chr8.3:35187902-35187921 | MS.gene048392:intron | 15.0% |
| !!! | TCCATTTTTTATTTTAGTTA+GGG | + | chr8.3:35184913-35184932 | MS.gene048392:intron | 15.0% |
| !!! | TGTACTTTTTATAAAATATG+TGG | - | chr8.3:35188250-35188269 | None:intergenic | 15.0% |
| !!! | TTACCATAATTTTGTTTTTT+TGG | + | chr8.3:35186054-35186073 | MS.gene048392:intron | 15.0% |
| !!! | TTTAATTTTTTAGTATCTAG+AGG | - | chr8.3:35187947-35187966 | None:intergenic | 15.0% |
| !! | AAAAAACAAACTTTACATGA+AGG | + | chr8.3:35187969-35187988 | MS.gene048392:intron | 20.0% |
| !! | ACCCTAACTAAAATAAAAAA+TGG | - | chr8.3:35184917-35184936 | None:intergenic | 20.0% |
| !! | TAATTTGAGCAAAAAAATGT+AGG | + | chr8.3:35187155-35187174 | MS.gene048392:intron | 20.0% |
| !! | TCTCCAAAAAAACAAAATTA+TGG | - | chr8.3:35186060-35186079 | None:intergenic | 20.0% |
| !! | TTGCATATTCAACAAAATTA+TGG | - | chr8.3:35186092-35186111 | None:intergenic | 20.0% |
| !!! | AATATGTTGTTTTGTTTGTA+GGG | + | chr8.3:35188434-35188453 | MS.gene048392:intron | 20.0% |
| !!! | AATCCAAAAAATTTGATTTG+TGG | + | chr8.3:35186638-35186657 | MS.gene048392:intron | 20.0% |
| !!! | AATTGATTTCAAACTCAAAA+TGG | - | chr8.3:35185632-35185651 | None:intergenic | 20.0% |
| !!! | ATCGATTTGTTATTGATATT+GGG | + | chr8.3:35188614-35188633 | MS.gene048392:CDS | 20.0% |
| !!! | ATTTTAGTTAGGGTTTATTT+TGG | + | chr8.3:35184923-35184942 | MS.gene048392:intron | 20.0% |
| !!! | CATATTCTATTATTGTTTTC+TGG | + | chr8.3:35185604-35185623 | MS.gene048392:intron | 20.0% |
| !!! | CTCCATTTTTTATTTTAGTT+AGG | + | chr8.3:35184912-35184931 | MS.gene048392:intron | 20.0% |
| !!! | TATCGATTTGTTATTGATAT+TGG | + | chr8.3:35188613-35188632 | MS.gene048392:CDS | 20.0% |
| !!! | TTGAAAATTTGAAGATCTTT+TGG | + | chr8.3:35185280-35185299 | MS.gene048392:intron | 20.0% |
| !!! | TTTTAGTTAGGGTTTATTTT+GGG | + | chr8.3:35184924-35184943 | MS.gene048392:intron | 20.0% |
| ! | AAATTAATATGTAGTGGTGT+CGG | + | chr8.3:35186566-35186585 | MS.gene048392:intron | 25.0% |
| ! | AAGGTACAAAAATTCAAAGT+TGG | + | chr8.3:35187214-35187233 | MS.gene048392:CDS | 25.0% |
| ! | AATGTGCTAAAATTTGATAG+CGG | + | chr8.3:35185755-35185774 | MS.gene048392:intron | 25.0% |
| ! | CTGTTTAAAAGTAGATCATT+AGG | - | chr8.3:35185675-35185694 | None:intergenic | 25.0% |
| ! | GTTCTATGTCTTTACATTAA+CGG | + | chr8.3:35186590-35186609 | MS.gene048392:intron | 25.0% |
| ! | TGAAAATAACTCAATGTCAA+TGG | - | chr8.3:35185727-35185746 | None:intergenic | 25.0% |
| ! | TGAGACATTATAAATGTGTT+TGG | - | chr8.3:35188038-35188057 | None:intergenic | 25.0% |
| ! | TTATCCTATTCTTATTGAGA+AGG | + | chr8.3:35187771-35187790 | MS.gene048392:intron | 25.0% |
| !!! | AGTATATTTTTTTCAGTGCA+CGG | + | chr8.3:35186677-35186696 | MS.gene048392:intron | 25.0% |
| !!! | ATAGCCCTTTGAAATATTTT+GGG | + | chr8.3:35187479-35187498 | MS.gene048392:CDS | 25.0% |
| !!! | ATTGTACATGATAACTTGTT+AGG | + | chr8.3:35185360-35185379 | MS.gene048392:intron | 25.0% |
| !!! | CAATATGTTGTTTTGTTTGT+AGG | + | chr8.3:35188433-35188452 | MS.gene048392:intron | 25.0% |
| !!! | GTGTAGTTTTTGGAAAATTA+TGG | - | chr8.3:35188331-35188350 | None:intergenic | 25.0% |
| !!! | TATAGCCCTTTGAAATATTT+TGG | + | chr8.3:35187478-35187497 | MS.gene048392:CDS | 25.0% |
| !!! | TTAGCTTTTTTGTTAGTACA+TGG | + | chr8.3:35186496-35186515 | MS.gene048392:intron | 25.0% |
| AAAATTCAAAGTTGGAGACA+AGG | + | chr8.3:35187222-35187241 | MS.gene048392:CDS | 30.0% | |
| AAATTGAATCATGTACATGC+AGG | + | chr8.3:35185433-35185452 | MS.gene048392:intron | 30.0% | |
| AACATAACAATAACATACCC+AGG | - | chr8.3:35185567-35185586 | None:intergenic | 30.0% | |
| AATTGAATCATGTACATGCA+GGG | + | chr8.3:35185434-35185453 | MS.gene048392:intron | 30.0% | |
| ACCAGTATTTCCTTTACTTA+TGG | + | chr8.3:35188203-35188222 | MS.gene048392:CDS | 30.0% | |
| ACGAGAAATAATGATCAACA+AGG | + | chr8.3:35186414-35186433 | MS.gene048392:intron | 30.0% | |
| ACTCAACTGACAATATTGTT+AGG | - | chr8.3:35186826-35186845 | None:intergenic | 30.0% | |
| ATCTATTTGCAAGACATTGA+GGG | - | chr8.3:35186959-35186978 | None:intergenic | 30.0% | |
| ATGTCTCATCCTTTCTATTT+AGG | + | chr8.3:35188050-35188069 | MS.gene048392:intron | 30.0% | |
| CAAGCCCAAAATATTTCAAA+GGG | - | chr8.3:35187486-35187505 | None:intergenic | 30.0% | |
| CAATATTGTCAGTTGAGTTA+AGG | + | chr8.3:35186828-35186847 | MS.gene048392:intron | 30.0% | |
| CCAAAAATGATTCTCACATA+TGG | + | chr8.3:35187316-35187335 | MS.gene048392:CDS | 30.0% | |
| CCAGTATTTCCTTTACTTAT+GGG | + | chr8.3:35188204-35188223 | MS.gene048392:CDS | 30.0% | |
| CGAGAAATAATGATCAACAA+GGG | + | chr8.3:35186415-35186434 | MS.gene048392:intron | 30.0% | |
| GACAAAACTTACACATACTA+CGG | + | chr8.3:35185014-35185033 | MS.gene048392:intron | 30.0% | |
| GAGAAATAATGATCAACAAG+GGG | + | chr8.3:35186416-35186435 | MS.gene048392:intron | 30.0% | |
| GATTTCAAAAGACCAATCAA+AGG | - | chr8.3:35188135-35188154 | None:intergenic | 30.0% | |
| GGGGTTATAGATATTAAAGT+CGG | + | chr8.3:35186462-35186481 | MS.gene048392:intron | 30.0% | |
| GGGTTATAGATATTAAAGTC+GGG | + | chr8.3:35186463-35186482 | MS.gene048392:intron | 30.0% | |
| GTCATTACTGCTTATTGTAA+GGG | - | chr8.3:35184997-35185016 | None:intergenic | 30.0% | |
| TAAGGGAAAAAAAAAGAGCA+TGG | - | chr8.3:35184980-35184999 | None:intergenic | 30.0% | |
| TAATTGAAATCACTCGAGTT+CGG | + | chr8.3:35187841-35187860 | MS.gene048392:intron | 30.0% | |
| TAATTTCTCCCAAAGTCATA+TGG | + | chr8.3:35186116-35186135 | MS.gene048392:intron | 30.0% | |
| TCAAGCCCAAAATATTTCAA+AGG | - | chr8.3:35187487-35187506 | None:intergenic | 30.0% | |
| TCACATGTTGAAGAATGAAT+GGG | + | chr8.3:35185518-35185537 | MS.gene048392:CDS | 30.0% | |
| TGCCAATGCAAAAATTAAGT+GGG | + | chr8.3:35186925-35186944 | MS.gene048392:intron | 30.0% | |
| TGTCATTACTGCTTATTGTA+AGG | - | chr8.3:35184998-35185017 | None:intergenic | 30.0% | |
| TTACGGTATACAATTTGTGT+CGG | + | chr8.3:35186178-35186197 | MS.gene048392:intron | 30.0% | |
| TTCACATGTTGAAGAATGAA+TGG | + | chr8.3:35185517-35185536 | MS.gene048392:CDS | 30.0% | |
| TTTGTAGGGAGAAAGATAAT+AGG | + | chr8.3:35188448-35188467 | MS.gene048392:intron | 30.0% | |
| ! | CAACTGATTCAGTATATGTT+TGG | - | chr8.3:35188398-35188417 | None:intergenic | 30.0% |
| ! | CATGGTTCTATACAACTATA+AGG | - | chr8.3:35185092-35185111 | None:intergenic | 30.0% |
| ! | CCATATGTGAGAATCATTTT+TGG | - | chr8.3:35187319-35187338 | None:intergenic | 30.0% |
| ! | TTCAATAGCTTCCTTCTTTT+TGG | - | chr8.3:35187620-35187639 | None:intergenic | 30.0% |
| ! | TTGATCAAGCGTTCAAATTT+TGG | - | chr8.3:35187809-35187828 | None:intergenic | 30.0% |
| !! | AGTTTTTGGAAAATTATGGC+AGG | - | chr8.3:35188327-35188346 | None:intergenic | 30.0% |
| !! | ATCTCATGGAAAACTTGTTA+TGG | + | chr8.3:35188152-35188171 | MS.gene048392:CDS | 30.0% |
| !! | GTTTAATTTTTAGGGAACTC+AGG | + | chr8.3:35187911-35187930 | MS.gene048392:intron | 30.0% |
| !! | TTGAAGATCTTTTGGAAGAA+GGG | + | chr8.3:35185288-35185307 | MS.gene048392:intron | 30.0% |
| !! | TTTGAAGATCTTTTGGAAGA+AGG | + | chr8.3:35185287-35185306 | MS.gene048392:intron | 30.0% |
| !!! | AGATTCAAAGTGCTATTTTG+TGG | + | chr8.3:35185477-35185496 | MS.gene048392:CDS | 30.0% |
| !!! | ATTGGTCTTTTGAAATCTCA+TGG | + | chr8.3:35188138-35188157 | MS.gene048392:CDS | 30.0% |
| !!! | GCACCACAAATCAAATTTTT+TGG | - | chr8.3:35186644-35186663 | None:intergenic | 30.0% |
| !!! | GTATATTTTTTTCAGTGCAC+GGG | + | chr8.3:35186678-35186697 | MS.gene048392:intron | 30.0% |
| !!! | GTGAAATTTGCTAAAGCTTT+TGG | + | chr8.3:35187562-35187581 | MS.gene048392:CDS | 30.0% |
| AAGGAAGCTATTGAACTTCT+TGG | + | chr8.3:35187625-35187644 | MS.gene048392:CDS | 35.0% | |
| AATCAAAGGTAACAGAGGAT+GGG | - | chr8.3:35188121-35188140 | None:intergenic | 35.0% | |
| ATAATAGGAGGGAGTTTGAT+TGG | + | chr8.3:35188463-35188482 | MS.gene048392:CDS | 35.0% | |
| ATGTGCTTACCCATAAGTAA+AGG | - | chr8.3:35188216-35188235 | None:intergenic | 35.0% | |
| CACATGTTGAAGAATGAATG+GGG | + | chr8.3:35185519-35185538 | MS.gene048392:CDS | 35.0% | |
| CCAATGCAAAAATTAAGTGG+GGG | + | chr8.3:35186927-35186946 | MS.gene048392:intron | 35.0% | |
| CCCATAAGTAAAGGAAATAC+TGG | - | chr8.3:35188207-35188226 | None:intergenic | 35.0% | |
| CGTTCCTTCTCAATAAGAAT+AGG | - | chr8.3:35187778-35187797 | None:intergenic | 35.0% | |
| CTGCCAATGCAAAAATTAAG+TGG | + | chr8.3:35186924-35186943 | MS.gene048392:intron | 35.0% | |
| CTTGTCATTGAACCTATGTT+TGG | + | chr8.3:35188270-35188289 | MS.gene048392:intron | 35.0% | |
| GATAAACCCAACTTGCAATT+AGG | + | chr8.3:35187505-35187524 | MS.gene048392:CDS | 35.0% | |
| GATCTATTTGCAAGACATTG+AGG | - | chr8.3:35186960-35186979 | None:intergenic | 35.0% | |
| GCCAATGCAAAAATTAAGTG+GGG | + | chr8.3:35186926-35186945 | MS.gene048392:intron | 35.0% | |
| GCTGAAACAACTTCAATTTC+AGG | - | chr8.3:35188544-35188563 | None:intergenic | 35.0% | |
| GTATATGTTTGGTATCACAC+TGG | - | chr8.3:35188387-35188406 | None:intergenic | 35.0% | |
| GTCTTAGACTCTTATGACAT+TGG | + | chr8.3:35186202-35186221 | MS.gene048392:intron | 35.0% | |
| TAAACGAGCCTATAGAAAAC+AGG | - | chr8.3:35187077-35187096 | None:intergenic | 35.0% | |
| TACCTTCTTGAGAAGTTGAA+GGG | - | chr8.3:35184885-35184904 | None:intergenic | 35.0% | |
| TAGGGAGAAAGATAATAGGA+GGG | + | chr8.3:35188452-35188471 | MS.gene048392:intron | 35.0% | |
| TATTGTCAGTTGAGTTAAGG+TGG | + | chr8.3:35186831-35186850 | MS.gene048392:intron | 35.0% | |
| TCTCATAGTTAGAGATGACA+TGG | - | chr8.3:35185110-35185129 | None:intergenic | 35.0% | |
| TTACCTTCTTGAGAAGTTGA+AGG | - | chr8.3:35184886-35184905 | None:intergenic | 35.0% | |
| TTTGAACGCTTGATCAATCA+AGG | + | chr8.3:35187812-35187831 | MS.gene048392:intron | 35.0% | |
| TTTGTGATCAGCATTCCAAA+TGG | + | chr8.3:35187406-35187425 | MS.gene048392:CDS | 35.0% | |
| ! | CGAGATTTTCTTTGCAACTT+TGG | - | chr8.3:35187285-35187304 | None:intergenic | 35.0% |
| ! | CTGCTACAAAGTGTAGTTTT+TGG | - | chr8.3:35188341-35188360 | None:intergenic | 35.0% |
| ! | TGGTGGATATGTTAGAATCA+CGG | + | chr8.3:35188298-35188317 | MS.gene048392:intron | 35.0% |
| ! | TTGAGTGTCCTGTTTTCTAT+AGG | + | chr8.3:35187066-35187085 | MS.gene048392:intron | 35.0% |
| ! | TTTTCTATAGGCTCGTTTAG+TGG | + | chr8.3:35187078-35187097 | MS.gene048392:intron | 35.0% |
| !! | ATAGCTTCCTTCTTTTTGGT+TGG | - | chr8.3:35187616-35187635 | None:intergenic | 35.0% |
| !! | CATGGAAAACTTGTTATGGT+TGG | + | chr8.3:35188156-35188175 | MS.gene048392:CDS | 35.0% |
| !! | GTCAAACACGTCTTATTTGA+GGG | - | chr8.3:35186324-35186343 | None:intergenic | 35.0% |
| !! | GTCTTATTTGAGGGTTACAT+AGG | - | chr8.3:35186315-35186334 | None:intergenic | 35.0% |
| !! | TGAACCTATGTTTGGTGTAA+TGG | + | chr8.3:35188278-35188297 | MS.gene048392:intron | 35.0% |
| !! | TGTCAAACACGTCTTATTTG+AGG | - | chr8.3:35186325-35186344 | None:intergenic | 35.0% |
| AAATGTAGGCATGAGATCGT+AGG | + | chr8.3:35187169-35187188 | MS.gene048392:intron | 40.0% | |
| AACCACACCTAATTGCAAGT+TGG | - | chr8.3:35187515-35187534 | None:intergenic | 40.0% | |
| AACTTGCAATTAGGTGTGGT+TGG | + | chr8.3:35187514-35187533 | MS.gene048392:CDS | 40.0% | |
| AATAACATACCCAGGCACTA+CGG | - | chr8.3:35185559-35185578 | None:intergenic | 40.0% | |
| ACCACACCTAATTGCAAGTT+GGG | - | chr8.3:35187514-35187533 | None:intergenic | 40.0% | |
| ACTAACATGAACCAGGGAAT+AGG | - | chr8.3:35186987-35187006 | None:intergenic | 40.0% | |
| AGACCAATCAAAGGTAACAG+AGG | - | chr8.3:35188126-35188145 | None:intergenic | 40.0% | |
| AGTAACAGAGGTAGGAAACA+AGG | + | chr8.3:35187195-35187214 | MS.gene048392:CDS | 40.0% | |
| ATACGACACTAACATGAACC+AGG | - | chr8.3:35186994-35187013 | None:intergenic | 40.0% | |
| CAATCAAAGGTAACAGAGGA+TGG | - | chr8.3:35188122-35188141 | None:intergenic | 40.0% | |
| CACATACTACGGAAGTAAAG+TGG | + | chr8.3:35185025-35185044 | MS.gene048392:intron | 40.0% | |
| CACTGAACAAGATCAAATGC+AGG | + | chr8.3:35187669-35187688 | MS.gene048392:CDS | 40.0% | |
| CACTTCTCCAACCAAAAAGA+AGG | + | chr8.3:35187606-35187625 | MS.gene048392:CDS | 40.0% | |
| CATCCTCTGTTACCTTTGAT+TGG | + | chr8.3:35188120-35188139 | MS.gene048392:CDS | 40.0% | |
| CTAACATGAACCAGGGAATA+GGG | - | chr8.3:35186986-35187005 | None:intergenic | 40.0% | |
| CTGTTGCAGCCTAAATAGAA+AGG | - | chr8.3:35188062-35188081 | None:intergenic | 40.0% | |
| CTTTCTATTTAGGCTGCAAC+AGG | + | chr8.3:35188060-35188079 | MS.gene048392:intron | 40.0% | |
| GACACTCCTTAATCAGTGTT+CGG | + | chr8.3:35186287-35186306 | MS.gene048392:intron | 40.0% | |
| GAGTTTGATTGGAGGAATCA+AGG | + | chr8.3:35188474-35188493 | MS.gene048392:CDS | 40.0% | |
| GTAGGGAGAAAGATAATAGG+AGG | + | chr8.3:35188451-35188470 | MS.gene048392:intron | 40.0% | |
| GTGAACCACCATATGACTTT+GGG | - | chr8.3:35186127-35186146 | None:intergenic | 40.0% | |
| TACGACACTAACATGAACCA+GGG | - | chr8.3:35186993-35187012 | None:intergenic | 40.0% | |
| TATGGTTCCAAGAATCTCGA+TGG | + | chr8.3:35187334-35187353 | MS.gene048392:CDS | 40.0% | |
| TCCACCATTACACCAAACAT+AGG | - | chr8.3:35188285-35188304 | None:intergenic | 40.0% | |
| TCTCACAATTACGCGTGTTA+CGG | + | chr8.3:35186161-35186180 | MS.gene048392:intron | 40.0% | |
| TGATTATGTCAACACTGCGT+TGG | + | chr8.3:35188564-35188583 | MS.gene048392:CDS | 40.0% | |
| TTCAAAGTTGGAGACAAGGT+AGG | + | chr8.3:35187226-35187245 | MS.gene048392:CDS | 40.0% | |
| TTTCTCCCAAAGTCATATGG+TGG | + | chr8.3:35186119-35186138 | MS.gene048392:intron | 40.0% | |
| ! | CCCCCACTTAATTTTTGCAT+TGG | - | chr8.3:35186930-35186949 | None:intergenic | 40.0% |
| ! | TTAGGGAACTCAGGATTAGT+AGG | + | chr8.3:35187920-35187939 | MS.gene048392:intron | 40.0% |
| !! | ACCTATGTTTGGTGTAATGG+TGG | + | chr8.3:35188281-35188300 | MS.gene048392:intron | 40.0% |
| !! | GGAAATACTGGTAGCTCTAA+AGG | - | chr8.3:35188195-35188214 | None:intergenic | 40.0% |
| !!! | TGCTAAAGCTTTTGGTGCTA+AGG | + | chr8.3:35187570-35187589 | MS.gene048392:CDS | 40.0% |
| !!! | TTTTGGATGAGCATCGAGAT+TGG | + | chr8.3:35186018-35186037 | MS.gene048392:intron | 40.0% |
| ACCCAACTTGCAATTAGGTG+TGG | + | chr8.3:35187510-35187529 | MS.gene048392:CDS | 45.0% | |
| ATAACATACCCAGGCACTAC+GGG | - | chr8.3:35185558-35185577 | None:intergenic | 45.0% | |
| ATAGATCCATCCCTATTCCC+TGG | + | chr8.3:35186973-35186992 | MS.gene048392:intron | 45.0% | |
| ATAGGAGGGAGTTTGATTGG+AGG | + | chr8.3:35188466-35188485 | MS.gene048392:CDS | 45.0% | |
| CGTGAACCACCATATGACTT+TGG | - | chr8.3:35186128-35186147 | None:intergenic | 45.0% | |
| CTCCCTTCAACTTCTCAAGA+AGG | + | chr8.3:35184880-35184899 | MS.gene048392:CDS | 45.0% | |
| CTCGATGGCACTATCACATA+TGG | + | chr8.3:35187349-35187368 | MS.gene048392:CDS | 45.0% | |
| CTGGTATGCCAAAATCACGA+CGG | - | chr8.3:35188368-35188387 | None:intergenic | 45.0% | |
| CTTTGCAACTTTGGCATGAG+TGG | - | chr8.3:35187276-35187295 | None:intergenic | 45.0% | |
| GATAGTGCCATCGAGATTCT+TGG | - | chr8.3:35187344-35187363 | None:intergenic | 45.0% | |
| GATGGCACTATCACATATGG+AGG | + | chr8.3:35187352-35187371 | MS.gene048392:CDS | 45.0% | |
| GCCAATCCAAAAGCCTTTCT+GGG | - | chr8.3:35184834-35184853 | None:intergenic | 45.0% | |
| GCTGATCACAAAGCTTTCGT+CGG | - | chr8.3:35187398-35187417 | None:intergenic | 45.0% | |
| TCATGTACATGCAGGGAAAC+TGG | + | chr8.3:35185441-35185460 | MS.gene048392:intron | 45.0% | |
| TGCCAATCCAAAAGCCTTTC+TGG | - | chr8.3:35184835-35184854 | None:intergenic | 45.0% | |
| TGTGTCAATGATGCCATCCA+AGG | - | chr8.3:35188088-35188107 | None:intergenic | 45.0% | |
| TTGGAGACAAGGTAGGTGTT+GGG | + | chr8.3:35187233-35187252 | MS.gene048392:CDS | 45.0% | |
| ! | TCCCAGAAAGGCTTTTGGAT+TGG | + | chr8.3:35184830-35184849 | MS.gene048392:CDS | 45.0% |
| ! | TTCAGGTTTCACGTCGTGTT+TGG | - | chr8.3:35188527-35188546 | None:intergenic | 45.0% |
| !! | CAATTAGGTGTGGTTGGTCT+TGG | + | chr8.3:35187520-35187539 | MS.gene048392:CDS | 45.0% |
| !! | TAGGTGCCGAACACTGATTA+AGG | - | chr8.3:35186296-35186315 | None:intergenic | 45.0% |
| !! | TCTTGGTGGACTTGGTCATA+TGG | + | chr8.3:35187537-35187556 | MS.gene048392:CDS | 45.0% |
| !! | ATATTTGATATTAATTTAAT+TGG | + | chr8.3:35185397-35185416 | MS.gene048392:intron | 5.0% |
| AGGGCTATACACTGTGATCC+CGG | - | chr8.3:35187467-35187486 | None:intergenic | 50.0% | |
| CAAAGGTAACAGAGGATGGG+TGG | - | chr8.3:35188118-35188137 | None:intergenic | 50.0% | |
| CATGAACCAGGGAATAGGGA+TGG | - | chr8.3:35186982-35187001 | None:intergenic | 50.0% | |
| GATCGTAGGCGAAGTAACAG+AGG | + | chr8.3:35187183-35187202 | MS.gene048392:CDS | 50.0% | |
| GCATCAAGAGGTAGGCCATT+TGG | - | chr8.3:35187424-35187443 | None:intergenic | 50.0% | |
| GTAGGCGAAGTAACAGAGGT+AGG | + | chr8.3:35187187-35187206 | MS.gene048392:CDS | 50.0% | |
| GTTGGAGACAAGGTAGGTGT+TGG | + | chr8.3:35187232-35187251 | MS.gene048392:CDS | 50.0% | |
| TAACATACCCAGGCACTACG+GGG | - | chr8.3:35185557-35185576 | None:intergenic | 50.0% | |
| ! | AGAGTTGGAGCATCCCAGAA+AGG | + | chr8.3:35184818-35184837 | MS.gene048392:CDS | 50.0% |
| ! | GAGCATCCCAGAAAGGCTTT+TGG | + | chr8.3:35184825-35184844 | MS.gene048392:CDS | 50.0% |
| ! | GCAGTATGCCGTCGTGATTT+TGG | + | chr8.3:35188357-35188376 | MS.gene048392:intron | 50.0% |
| !! | GGTAGCTCTAAAGGCTTCTC+AGG | - | chr8.3:35188186-35188205 | None:intergenic | 50.0% |
| !! | TTAGGTGTGGTTGGTCTTGG+TGG | + | chr8.3:35187523-35187542 | MS.gene048392:CDS | 50.0% |
| !! | TTTCTGGGATGCTCCAACTC+TGG | - | chr8.3:35184819-35184838 | None:intergenic | 50.0% |
| !!! | AGGCTTTTGGATTGGCAGCT+AGG | + | chr8.3:35184838-35184857 | MS.gene048392:CDS | 50.0% |
| !!! | GGCTTTTGGATTGGCAGCTA+GGG | + | chr8.3:35184839-35184858 | MS.gene048392:CDS | 50.0% |
| AGAGGAGCTGCAGCATCAAG+AGG | - | chr8.3:35187436-35187455 | None:intergenic | 55.0% | |
| CAGTTTACCCCGTAGTGCCT+GGG | + | chr8.3:35185547-35185566 | MS.gene048392:CDS | 55.0% | |
| GAGCTGCAGCATCAAGAGGT+AGG | - | chr8.3:35187432-35187451 | None:intergenic | 55.0% | |
| GCAACTTTGGCATGAGTGGC+AGG | - | chr8.3:35187272-35187291 | None:intergenic | 55.0% | |
| TCAGTTTACCCCGTAGTGCC+TGG | + | chr8.3:35185546-35185565 | MS.gene048392:CDS | 55.0% | |
| TGGAGGCTACTCCGACACAA+TGG | + | chr8.3:35187369-35187388 | MS.gene048392:CDS | 55.0% | |
| TTAGGCTGCAACAGGCACCT+TGG | + | chr8.3:35188068-35188087 | MS.gene048392:intron | 55.0% | |
| TTCGTCGGCGACCATTGTGT+CGG | - | chr8.3:35187383-35187402 | None:intergenic | 55.0% | |
| TTGGCAGCTAGGGACTCATC+TGG | + | chr8.3:35184849-35184868 | MS.gene048392:CDS | 55.0% | |
| !! | CAAGGTAGGTGTTGGGTGCA+TGG | + | chr8.3:35187240-35187259 | MS.gene048392:CDS | 55.0% |
| !! | GTGGTTGGTCTTGGTGGACT+TGG | + | chr8.3:35187529-35187548 | MS.gene048392:CDS | 55.0% |
| GCTGCAACAGGCACCTTGGA+TGG | + | chr8.3:35188072-35188091 | MS.gene048392:CDS | 60.0% | |
| ACACTGTGATCCCGGCGCAG+AGG | - | chr8.3:35187459-35187478 | None:intergenic | 65.0% | |
| CAGCTCCTCTCCTCTGCGCC+GGG | + | chr8.3:35187446-35187465 | MS.gene048392:CDS | 70.0% | |
| GCAGCTCCTCTCCTCTGCGC+CGG | + | chr8.3:35187445-35187464 | MS.gene048392:CDS | 70.0% | |
| GTGATCCCGGCGCAGAGGAG+AGG | - | chr8.3:35187454-35187473 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 35184804 | 35188657 | 35184804 | ID=MS.gene048392 |
| chr8.3 | mRNA | 35184804 | 35188657 | 35184804 | ID=MS.gene048392.t1;Parent=MS.gene048392 |
| chr8.3 | exon | 35184804 | 35184901 | 35184804 | ID=MS.gene048392.t1.exon1;Parent=MS.gene048392.t1 |
| chr8.3 | CDS | 35184804 | 35184901 | 35184804 | ID=cds.MS.gene048392.t1;Parent=MS.gene048392.t1 |
| chr8.3 | exon | 35185455 | 35185568 | 35185455 | ID=MS.gene048392.t1.exon2;Parent=MS.gene048392.t1 |
| chr8.3 | CDS | 35185455 | 35185568 | 35185455 | ID=cds.MS.gene048392.t1;Parent=MS.gene048392.t1 |
| chr8.3 | exon | 35187177 | 35187690 | 35187177 | ID=MS.gene048392.t1.exon3;Parent=MS.gene048392.t1 |
| chr8.3 | CDS | 35187177 | 35187690 | 35187177 | ID=cds.MS.gene048392.t1;Parent=MS.gene048392.t1 |
| chr8.3 | exon | 35188072 | 35188225 | 35188072 | ID=MS.gene048392.t1.exon4;Parent=MS.gene048392.t1 |
| chr8.3 | CDS | 35188072 | 35188225 | 35188072 | ID=cds.MS.gene048392.t1;Parent=MS.gene048392.t1 |
| chr8.3 | exon | 35188455 | 35188657 | 35188455 | ID=MS.gene048392.t1.exon5;Parent=MS.gene048392.t1 |
| chr8.3 | CDS | 35188455 | 35188657 | 35188455 | ID=cds.MS.gene048392.t1;Parent=MS.gene048392.t1 |
| Gene Sequence |
| Protein sequence |
