Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068621.t1 | XP_003612972.2 | 96.1 | 361 | 14 | 0 | 1 | 361 | 1 | 361 | 6.00E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068621.t1 | Q9ZRF1 | 77.5 | 356 | 80 | 0 | 6 | 361 | 4 | 359 | 2.0e-165 | 583.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068621.t1 | G7KGH5 | 96.1 | 361 | 14 | 0 | 1 | 361 | 1 | 361 | 4.3e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050400 | MS.gene068621 | 0.826449 | 2.70E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene068621 | 0.846073 | 2.73E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene068621 | 0.872001 | 4.45E-67 | -1.69E-46 |
| MS.gene05105 | MS.gene068621 | 0.815635 | 8.36E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene068621 | 0.802604 | 5.19E-49 | -1.69E-46 |
| MS.gene051521 | MS.gene068621 | 0.802346 | 5.86E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene068621 | 0.848255 | 6.89E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene068621 | 0.830234 | 3.29E-55 | -1.69E-46 |
| MS.gene052134 | MS.gene068621 | 0.802504 | 5.44E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene068621 | 0.811974 | 5.35E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene068621 | 0.824645 | 7.21E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene068621 | 0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene068621 | 0.815766 | 7.82E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene068621 | 0.823778 | 1.15E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene068621 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene068621 | 0.820364 | 7.13E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene068621 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene052508 | MS.gene068621 | 0.804052 | 2.60E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene068621 | 0.820317 | 7.31E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene068621 | 0.814908 | 1.21E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene068621 | 0.818818 | 1.61E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene068621 | 0.858332 | 8.86E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene068621 | 0.830363 | 3.06E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene068621 | 0.834841 | 2.37E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene068621 | 0.84059 | 7.93E-58 | -1.69E-46 |
| MS.gene055859 | MS.gene068621 | 0.817986 | 2.48E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene068621 | 0.823688 | 1.21E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene068621 | 0.860209 | 2.42E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene068621 | 0.834732 | 2.53E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene068621 | 0.81965 | 1.04E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene068621 | 0.810066 | 1.39E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene068621 | 0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene068621 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene068621 | 0.812059 | 5.13E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene068621 | 0.81164 | 6.33E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene068621 | 0.804846 | 1.78E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene068621 | 0.86261 | 4.48E-64 | -1.69E-46 |
| MS.gene05907 | MS.gene068621 | 0.827552 | 1.47E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene068621 | 0.827868 | 1.23E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene068621 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene068621 | 0.806262 | 8.96E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene068621 | 0.810307 | 1.23E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene068621 | 0.824719 | 6.93E-54 | -1.69E-46 |
| MS.gene059933 | MS.gene068621 | 0.822151 | 2.76E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene068621 | 0.857611 | 1.45E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene068621 | 0.804641 | 1.96E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene068621 | 0.835143 | 1.99E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene068621 | 0.885387 | 8.49E-72 | -1.69E-46 |
| MS.gene061159 | MS.gene068621 | 0.805384 | 1.37E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068621.t1 | MTR_5g031180 | 96.122 | 361 | 14 | 0 | 1 | 361 | 1 | 361 | 0.0 | 711 |
| MS.gene068621.t1 | MTR_5g031190 | 84.488 | 361 | 56 | 0 | 1 | 361 | 1 | 361 | 0.0 | 630 |
| MS.gene068621.t1 | MTR_8g068190 | 82.222 | 360 | 64 | 0 | 1 | 360 | 1 | 360 | 0.0 | 580 |
| MS.gene068621.t1 | MTR_5g031250 | 78.116 | 361 | 79 | 0 | 1 | 361 | 1 | 361 | 0.0 | 573 |
| MS.gene068621.t1 | MTR_5g031230 | 77.285 | 361 | 82 | 0 | 1 | 361 | 1 | 361 | 0.0 | 572 |
| MS.gene068621.t1 | MTR_5g031310 | 78.249 | 354 | 77 | 0 | 7 | 360 | 8 | 361 | 0.0 | 570 |
| MS.gene068621.t1 | MTR_5g031305 | 78.249 | 354 | 77 | 0 | 7 | 360 | 8 | 361 | 0.0 | 569 |
| MS.gene068621.t1 | MTR_5g031390 | 76.454 | 361 | 85 | 0 | 1 | 361 | 1 | 361 | 0.0 | 565 |
| MS.gene068621.t1 | MTR_4g115300 | 75.900 | 361 | 87 | 0 | 1 | 361 | 1 | 361 | 0.0 | 564 |
| MS.gene068621.t1 | MTR_5g031300 | 75.775 | 355 | 86 | 0 | 7 | 361 | 8 | 362 | 0.0 | 557 |
| MS.gene068621.t1 | MTR_5g031360 | 76.638 | 351 | 82 | 0 | 10 | 360 | 12 | 362 | 0.0 | 550 |
| MS.gene068621.t1 | MTR_5g031210 | 75.346 | 361 | 89 | 0 | 1 | 361 | 1 | 361 | 0.0 | 540 |
| MS.gene068621.t1 | MTR_8g092630 | 62.079 | 356 | 134 | 1 | 4 | 359 | 61 | 415 | 2.46e-148 | 425 |
| MS.gene068621.t1 | MTR_5g031430 | 60.504 | 357 | 139 | 1 | 2 | 358 | 4 | 358 | 5.51e-146 | 417 |
| MS.gene068621.t1 | MTR_1g025950 | 58.192 | 354 | 147 | 1 | 8 | 360 | 7 | 360 | 5.92e-136 | 392 |
| MS.gene068621.t1 | MTR_5g031250 | 77.593 | 241 | 54 | 0 | 1 | 241 | 1 | 241 | 9.34e-135 | 385 |
| MS.gene068621.t1 | MTR_1g107425 | 53.392 | 339 | 158 | 0 | 15 | 353 | 13 | 351 | 2.46e-123 | 359 |
| MS.gene068621.t1 | MTR_2g009810 | 54.046 | 346 | 157 | 2 | 14 | 358 | 62 | 406 | 2.56e-119 | 351 |
| MS.gene068621.t1 | MTR_1g107425 | 55.515 | 272 | 121 | 0 | 15 | 286 | 13 | 284 | 1.77e-98 | 294 |
| MS.gene068621.t1 | MTR_2g009820 | 50.607 | 247 | 118 | 3 | 116 | 358 | 8 | 254 | 5.83e-67 | 212 |
| MS.gene068621.t1 | MTR_5g031290 | 73.684 | 114 | 30 | 0 | 247 | 360 | 80 | 193 | 6.13e-54 | 176 |
| MS.gene068621.t1 | MTR_5g031290 | 81.250 | 80 | 14 | 1 | 1 | 79 | 1 | 80 | 3.24e-40 | 140 |
| MS.gene068621.t1 | MTR_8g095220 | 26.429 | 280 | 176 | 7 | 25 | 278 | 68 | 343 | 8.60e-21 | 93.2 |
| MS.gene068621.t1 | MTR_8g095220 | 28.452 | 239 | 146 | 6 | 25 | 242 | 68 | 302 | 9.85e-21 | 91.7 |
| MS.gene068621.t1 | MTR_3g089977 | 24.713 | 348 | 225 | 12 | 39 | 354 | 37 | 379 | 2.59e-18 | 85.9 |
| MS.gene068621.t1 | MTR_3g089940 | 24.852 | 338 | 218 | 11 | 39 | 344 | 37 | 370 | 8.53e-18 | 84.3 |
| MS.gene068621.t1 | MTR_3g089940 | 24.852 | 338 | 218 | 11 | 39 | 344 | 37 | 370 | 9.83e-18 | 84.0 |
| MS.gene068621.t1 | MTR_3g089970 | 24.260 | 338 | 220 | 11 | 39 | 344 | 38 | 371 | 4.78e-16 | 79.0 |
| MS.gene068621.t1 | MTR_1g069430 | 25.067 | 375 | 242 | 12 | 1 | 349 | 1 | 362 | 1.82e-15 | 77.4 |
| MS.gene068621.t1 | MTR_0001s0660 | 25.743 | 303 | 199 | 11 | 38 | 318 | 35 | 333 | 2.05e-15 | 77.4 |
| MS.gene068621.t1 | MTR_3g089940 | 24.510 | 306 | 203 | 9 | 39 | 319 | 37 | 339 | 3.61e-15 | 76.3 |
| MS.gene068621.t1 | MTR_3g089940 | 24.510 | 306 | 203 | 9 | 39 | 319 | 37 | 339 | 4.19e-15 | 75.9 |
| MS.gene068621.t1 | MTR_7g099040 | 25.513 | 341 | 204 | 12 | 39 | 340 | 38 | 367 | 1.67e-14 | 74.3 |
| MS.gene068621.t1 | MTR_6g466320 | 24.749 | 299 | 201 | 8 | 1 | 287 | 6 | 292 | 1.10e-13 | 72.0 |
| MS.gene068621.t1 | MTR_6g465010 | 24.749 | 299 | 201 | 8 | 1 | 287 | 6 | 292 | 1.10e-13 | 72.0 |
| MS.gene068621.t1 | MTR_7g068320 | 26.648 | 349 | 219 | 14 | 39 | 353 | 48 | 393 | 1.51e-13 | 71.6 |
| MS.gene068621.t1 | MTR_3g099460 | 28.280 | 343 | 200 | 14 | 39 | 342 | 37 | 372 | 7.09e-13 | 69.7 |
| MS.gene068621.t1 | MTR_3g099460 | 28.280 | 343 | 200 | 14 | 39 | 342 | 44 | 379 | 7.92e-13 | 69.3 |
| MS.gene068621.t1 | MTR_6g465010 | 24.561 | 285 | 192 | 7 | 15 | 287 | 3 | 276 | 1.89e-12 | 68.2 |
| MS.gene068621.t1 | MTR_5g087710 | 24.118 | 340 | 220 | 12 | 39 | 344 | 46 | 381 | 9.35e-12 | 66.2 |
| MS.gene068621.t1 | MTR_5g045710 | 25.359 | 209 | 141 | 3 | 38 | 233 | 35 | 241 | 5.81e-11 | 63.5 |
| MS.gene068621.t1 | MTR_7g068330 | 26.667 | 345 | 200 | 13 | 39 | 341 | 41 | 374 | 5.87e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068621.t1 | AT4G37970 | 65.922 | 358 | 122 | 0 | 3 | 360 | 4 | 361 | 3.40e-171 | 481 |
| MS.gene068621.t1 | AT4G37980 | 69.714 | 350 | 106 | 0 | 11 | 360 | 7 | 356 | 6.07e-168 | 473 |
| MS.gene068621.t1 | AT4G37990 | 71.470 | 347 | 99 | 0 | 12 | 358 | 8 | 354 | 6.20e-167 | 470 |
| MS.gene068621.t1 | AT4G39330 | 63.025 | 357 | 132 | 0 | 1 | 357 | 1 | 357 | 2.51e-165 | 466 |
| MS.gene068621.t1 | AT2G21730 | 62.890 | 353 | 129 | 2 | 7 | 357 | 1 | 353 | 6.76e-157 | 445 |
| MS.gene068621.t1 | AT2G21890 | 62.216 | 352 | 132 | 1 | 7 | 357 | 1 | 352 | 4.98e-156 | 443 |
| MS.gene068621.t1 | AT4G39330 | 63.696 | 303 | 110 | 0 | 1 | 303 | 1 | 303 | 8.10e-138 | 394 |
| MS.gene068621.t1 | AT4G37970 | 65.068 | 292 | 102 | 0 | 3 | 294 | 4 | 295 | 1.10e-132 | 381 |
| MS.gene068621.t1 | AT4G37980 | 69.792 | 288 | 87 | 0 | 11 | 298 | 7 | 294 | 2.49e-131 | 377 |
| MS.gene068621.t1 | AT3G19450 | 53.623 | 345 | 160 | 0 | 12 | 356 | 10 | 354 | 9.26e-115 | 338 |
| MS.gene068621.t1 | AT1G72680 | 50.575 | 348 | 171 | 1 | 11 | 358 | 9 | 355 | 1.27e-114 | 337 |
| MS.gene068621.t1 | AT4G37970 | 63.636 | 242 | 88 | 0 | 3 | 244 | 4 | 245 | 1.12e-105 | 311 |
| MS.gene068621.t1 | AT4G37970 | 64.167 | 240 | 86 | 0 | 3 | 242 | 4 | 243 | 1.33e-105 | 311 |
| MS.gene068621.t1 | AT4G34230 | 51.695 | 354 | 170 | 1 | 7 | 359 | 4 | 357 | 5.83e-104 | 310 |
| MS.gene068621.t1 | AT4G34230 | 51.412 | 354 | 171 | 1 | 7 | 359 | 4 | 357 | 4.55e-103 | 308 |
| MS.gene068621.t1 | AT5G63620 | 26.460 | 291 | 184 | 7 | 15 | 278 | 58 | 345 | 8.79e-23 | 99.4 |
| MS.gene068621.t1 | AT5G63620 | 26.460 | 291 | 184 | 7 | 15 | 278 | 58 | 345 | 1.07e-22 | 99.0 |
| MS.gene068621.t1 | AT5G63620 | 27.309 | 249 | 158 | 5 | 15 | 242 | 58 | 304 | 3.62e-22 | 95.9 |
| MS.gene068621.t1 | AT5G43940 | 25.937 | 347 | 218 | 11 | 39 | 352 | 36 | 376 | 2.10e-18 | 85.9 |
| MS.gene068621.t1 | AT5G43940 | 25.937 | 347 | 218 | 11 | 39 | 352 | 48 | 388 | 2.21e-18 | 85.9 |
| MS.gene068621.t1 | AT1G64710 | 25.519 | 337 | 212 | 13 | 39 | 340 | 36 | 368 | 6.98e-15 | 75.5 |
| MS.gene068621.t1 | AT1G64710 | 25.519 | 337 | 212 | 13 | 39 | 340 | 13 | 345 | 7.06e-15 | 75.5 |
| MS.gene068621.t1 | AT1G77120 | 23.343 | 347 | 231 | 12 | 39 | 354 | 36 | 378 | 4.10e-14 | 73.2 |
| MS.gene068621.t1 | AT4G22110 | 24.412 | 340 | 216 | 15 | 39 | 342 | 43 | 377 | 7.27e-11 | 63.5 |
| MS.gene068621.t1 | AT4G22110 | 24.412 | 340 | 216 | 15 | 39 | 342 | 43 | 377 | 7.27e-11 | 63.5 |
Find 104 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTAAAGGCATGAAGTTTC+TGG | 0.208621 | 5.1:-21437496 | MS.gene068621:intron |
| GTGGTTGGTCTTGGTGGATT+AGG | 0.231502 | 5.1:-21437136 | MS.gene068621:CDS |
| AAGGAAGCCATTGAACATTT+AGG | 0.264479 | 5.1:-21437040 | MS.gene068621:CDS |
| GTGAAATTTGCTAAAGCTTT+TGG | 0.271062 | 5.1:-21437103 | MS.gene068621:CDS |
| GATTGTTCCATCAATATTCT+TGG | 0.284213 | 5.1:+21437324 | None:intergenic |
| GCACTATTCACATAATCTAT+TGG | 0.320075 | 5.1:+21436317 | None:intergenic |
| CCATCCACTAATGCCTTTGA+TGG | 0.326232 | 5.1:-21436623 | MS.gene068621:CDS |
| TATTGGTATGCACCTGCATT+TGG | 0.326748 | 5.1:+21436984 | None:intergenic |
| GGAAGCTCCAAAGGCTTCTC+TGG | 0.330712 | 5.1:+21436559 | None:intergenic |
| CATGTGGGTGTGGTTGGTCT+TGG | 0.332518 | 5.1:-21437145 | MS.gene068621:CDS |
| ATTGGAATAACCTCAATGTT+AGG | 0.333908 | 5.1:+21436335 | None:intergenic |
| TCTATTTACCCTTTAGTTCC+CGG | 0.349623 | 5.1:-21437610 | MS.gene068621:CDS |
| GCTGCAATGGGCACCTTTGA+TGG | 0.375852 | 5.1:-21436670 | MS.gene068621:CDS |
| GAGTATGATTGGAGGGATAA+AGG | 0.378275 | 5.1:-21436402 | MS.gene068621:CDS |
| CATGGTAAACTTGTTATAGT+TGG | 0.386573 | 5.1:-21436586 | MS.gene068621:CDS |
| GTGGGTGTGGTTGGTCTTGG+TGG | 0.387486 | 5.1:-21437142 | MS.gene068621:CDS |
| TGGAGCTCCAGAGAAGCCTT+TGG | 0.388078 | 5.1:-21436566 | MS.gene068621:CDS |
| ATGATTGGCGGGAGTATGAT+TGG | 0.391228 | 5.1:-21436413 | MS.gene068621:CDS |
| CTCCATTCAAATTCTCTAGA+AGG | 0.399838 | 5.1:-21441275 | MS.gene068621:intron |
| TTGTTAGGATGCTCCATCTC+TGG | 0.400461 | 5.1:+21441339 | None:intergenic |
| GTTAGGTTTCACACCATGTT+TGG | 0.412798 | 5.1:+21436352 | None:intergenic |
| ATATTGTGGTATTTGTCATT+CGG | 0.413182 | 5.1:-21437665 | MS.gene068621:CDS |
| AAACCCATCAAAGGCATTAG+TGG | 0.416505 | 5.1:+21436619 | None:intergenic |
| TCTTGGTGGATTAGGTCATA+TGG | 0.422443 | 5.1:-21437128 | MS.gene068621:CDS |
| TAAGTTCAAAATATTTCAAC+GGG | 0.433885 | 5.1:+21437182 | None:intergenic |
| ATGGGTTTATTGAAGAATCA+TGG | 0.434534 | 5.1:-21436604 | MS.gene068621:CDS |
| TATCGATTTGTTATTGACAT+TGG | 0.438397 | 5.1:-21436263 | MS.gene068621:CDS |
| GAGCATCCTAACAAGGCTTT+CGG | 0.442282 | 5.1:-21441330 | MS.gene068621:CDS |
| TACCTTCTAGAGAATTTGAA+TGG | 0.452320 | 5.1:+21441273 | None:intergenic |
| GTTGCTCCTCTTCTTTGCGC+GGG | 0.462582 | 5.1:-21437220 | MS.gene068621:CDS |
| GTAGGTGTGGGGTGCATGGT+TGG | 0.463188 | 5.1:-21437421 | MS.gene068621:CDS |
| TATGGCGCCAAGAATATTGA+TGG | 0.464291 | 5.1:-21437331 | MS.gene068621:CDS |
| ATTGATGGAACAATCACATA+TGG | 0.464788 | 5.1:-21437316 | MS.gene068621:CDS |
| GCCCATCCGAAAGCCTTGTT+AGG | 0.466479 | 5.1:+21441324 | None:intergenic |
| TCAAAGATGATTCTCACATA+TGG | 0.467079 | 5.1:-21437349 | MS.gene068621:CDS |
| GCATCAAGTGGTAAGGCATC+AGG | 0.469970 | 5.1:+21437244 | None:intergenic |
| TTTAGGAGCTGACTCATTTG+TGG | 0.470966 | 5.1:-21437023 | MS.gene068621:CDS |
| CCTGCATTTGGTCTTGTTCG+TGG | 0.476494 | 5.1:+21436996 | None:intergenic |
| TAAGAGTACCCGGGAACTAA+AGG | 0.478153 | 5.1:+21437601 | None:intergenic |
| GGTTTACATGTGGGTGTGGT+TGG | 0.481554 | 5.1:-21437151 | MS.gene068621:CDS |
| GGCTTTCGGATGGGCAGCTA+GGG | 0.482228 | 5.1:-21441316 | MS.gene068621:CDS |
| TAGAGAATTTGAATGGAGAC+AGG | 0.487837 | 5.1:+21441280 | None:intergenic |
| AGGCTTTCGGATGGGCAGCT+AGG | 0.494247 | 5.1:-21441317 | MS.gene068621:CDS |
| CACGGTAGGTGTGGGGTGCA+TGG | 0.496720 | 5.1:-21437425 | MS.gene068621:CDS |
| AAGAGTACCCGGGAACTAAA+GGG | 0.498094 | 5.1:+21437602 | None:intergenic |
| CATTATGTTATAGGCTGCAA+TGG | 0.498893 | 5.1:-21436683 | MS.gene068621:intron |
| GAAGTGTTCGTCGGCAACCA+TGG | 0.500610 | 5.1:+21437279 | None:intergenic |
| GTGGTAAGGCATCAGGAATA+CGG | 0.505776 | 5.1:+21437251 | None:intergenic |
| CATCCACTAATGCCTTTGAT+GGG | 0.513597 | 5.1:-21436622 | MS.gene068621:CDS |
| TTAAGTTCAAAATATTTCAA+CGG | 0.517104 | 5.1:+21437181 | None:intergenic |
| TGGGCAGCTAGGGACTCATC+TGG | 0.518107 | 5.1:-21441306 | MS.gene068621:CDS |
| CTATTTACCCTTTAGTTCCC+GGG | 0.522477 | 5.1:-21437609 | MS.gene068621:intron |
| GCCTGGTTTACATGTGGGTG+TGG | 0.525422 | 5.1:-21437155 | MS.gene068621:CDS |
| ATTATGTTATAGGCTGCAAT+GGG | 0.527310 | 5.1:-21436682 | MS.gene068621:intron |
| TCCTAACAAGGCTTTCGGAT+GGG | 0.532763 | 5.1:-21441325 | MS.gene068621:CDS |
| AGTTGGAGACACGGTAGGTG+TGG | 0.534980 | 5.1:-21437434 | MS.gene068621:CDS |
| GTCAGCTCCTAAATGTTCAA+TGG | 0.541539 | 5.1:+21437033 | None:intergenic |
| CGTTGCTCCTCTTCTTTGCG+CGG | 0.542634 | 5.1:-21437221 | MS.gene068621:CDS |
| CTGGCAGGGAGAAAGATGAT+TGG | 0.543989 | 5.1:-21436428 | MS.gene068621:intron |
| AGTGTCAATAATACCATCAA+AGG | 0.544745 | 5.1:+21436657 | None:intergenic |
| ATTTCACATCAGCTTTGAGT+AGG | 0.545168 | 5.1:+21436285 | None:intergenic |
| CCTCCAATTAAAGAAAATGC+GGG | 0.545652 | 5.1:+21436538 | None:intergenic |
| GTTGGAGACACGGTAGGTGT+GGG | 0.550631 | 5.1:-21437433 | MS.gene068621:CDS |
| GTGATCCCCGCGCAAAGAAG+AGG | 0.555802 | 5.1:+21437214 | None:intergenic |
| CAGGGAGAAAGATGATTGGC+GGG | 0.562126 | 5.1:-21436424 | MS.gene068621:CDS |
| AAGGTGACAAAGTTCAAAGT+TGG | 0.563516 | 5.1:-21437451 | MS.gene068621:CDS |
| ACAACTTTGACATGAGTGGC+AGG | 0.565146 | 5.1:+21437396 | None:intergenic |
| CGCGCAAAGAAGAGGAGCAA+CGG | 0.565342 | 5.1:+21437222 | None:intergenic |
| AGCAACGGCATCAAGTGGTA+AGG | 0.566534 | 5.1:+21437237 | None:intergenic |
| ATTGGCGGGAGTATGATTGG+AGG | 0.571924 | 5.1:-21436410 | MS.gene068621:CDS |
| GAAAATGCGGGAAGCTCCAA+AGG | 0.573890 | 5.1:+21436550 | None:intergenic |
| GCAGGGAGAAAGATGATTGG+CGG | 0.576700 | 5.1:-21436425 | MS.gene068621:intron |
| ACCTCCAATTAAAGAAAATG+CGG | 0.577029 | 5.1:+21436537 | None:intergenic |
| AACAAGCCTGGTTTACATGT+GGG | 0.577892 | 5.1:-21437160 | MS.gene068621:CDS |
| AATGGCTTTACAACCAGAGA+TGG | 0.581578 | 5.1:-21441352 | MS.gene068621:CDS |
| CCATCAAAGGCATTAGTGGA+TGG | 0.582622 | 5.1:+21436623 | None:intergenic |
| TTGCTCCTCTTCTTTGCGCG+GGG | 0.582714 | 5.1:-21437219 | MS.gene068621:CDS |
| ATCCTAACAAGGCTTTCGGA+TGG | 0.582927 | 5.1:-21441326 | MS.gene068621:CDS |
| TGGAGGCTACTCTGATACCA+TGG | 0.587648 | 5.1:-21437296 | MS.gene068621:CDS |
| TAACAAGCCTGGTTTACATG+TGG | 0.588235 | 5.1:-21437161 | MS.gene068621:CDS |
| TCTGGTGAAGTGACAAAGGT+GGG | 0.588343 | 5.1:-21437478 | MS.gene068621:CDS |
| TTGGCGGGAGTATGATTGGA+GGG | 0.597793 | 5.1:-21436409 | MS.gene068621:CDS |
| TTCTTCAATAAACCCATCAA+AGG | 0.601080 | 5.1:+21436610 | None:intergenic |
| GCATTCAAAGTACTATATTG+TGG | 0.602276 | 5.1:-21437679 | MS.gene068621:CDS |
| CCCACTCGTTCTTCAGCATG+TGG | 0.605038 | 5.1:+21437638 | None:intergenic |
| AGTGACAAAGGTGGGAAGCA+AGG | 0.605499 | 5.1:-21437470 | MS.gene068621:CDS |
| ACCACACCCACATGTAAACC+AGG | 0.610009 | 5.1:+21437154 | None:intergenic |
| TCCACATGCTGAAGAACGAG+TGG | 0.610054 | 5.1:-21437639 | MS.gene068621:CDS |
| CACCACAACTTTGACATGAG+TGG | 0.612104 | 5.1:+21437392 | None:intergenic |
| ACGGATCACGAAGTGTTCGT+CGG | 0.622341 | 5.1:+21437270 | None:intergenic |
| AGATTATGTGAATAGTGCAA+TGG | 0.622817 | 5.1:-21436312 | MS.gene068621:CDS |
| AGAGATGGAGCATCCTAACA+AGG | 0.623028 | 5.1:-21441337 | MS.gene068621:CDS |
| GATGGAACAATCACATATGG+AGG | 0.625685 | 5.1:-21437313 | MS.gene068621:CDS |
| TGGTGTGAAACCTAACATTG+AGG | 0.635543 | 5.1:-21436345 | MS.gene068621:CDS |
| CCACATGCTGAAGAACGAGT+GGG | 0.636670 | 5.1:-21437638 | MS.gene068621:CDS |
| TTCTGGTGAAGTGACAAAGG+TGG | 0.640686 | 5.1:-21437479 | MS.gene068621:CDS |
| TGCCACTCATGTCAAAGTTG+TGG | 0.640763 | 5.1:-21437394 | MS.gene068621:CDS |
| AGAGGAGCAACGGCATCAAG+TGG | 0.642130 | 5.1:+21437232 | None:intergenic |
| CCACGAACAAGACCAAATGC+AGG | 0.648583 | 5.1:-21436996 | MS.gene068621:intron |
| CACATGCTGAAGAACGAGTG+GGG | 0.656172 | 5.1:-21437637 | MS.gene068621:CDS |
| TTGGAGACACGGTAGGTGTG+GGG | 0.665343 | 5.1:-21437432 | MS.gene068621:CDS |
| TTCAAAGTTGGAGACACGGT+AGG | 0.682519 | 5.1:-21437439 | MS.gene068621:CDS |
| AGTTTCTGGTGAAGTGACAA+AGG | 0.684713 | 5.1:-21437482 | MS.gene068621:CDS |
| AAAGTTCAAAGTTGGAGACA+CGG | 0.703241 | 5.1:-21437443 | MS.gene068621:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATATTGTAACAAA+CGG | - | chr5.1:21440792-21440811 | MS.gene068621:intron | 10.0% |
| !! | TAATCATTTAATTACAAAAT+TGG | - | chr5.1:21436683-21436702 | MS.gene068621:intron | 10.0% |
| !! | TAATTAATTATGTTAAGAAA+TGG | - | chr5.1:21439441-21439460 | MS.gene068621:intron | 10.0% |
| !! | TGTTTAAATAAAATATATAG+GGG | + | chr5.1:21436503-21436522 | None:intergenic | 10.0% |
| !! | TTAAACATATAAAAAAATCT+CGG | + | chr5.1:21439543-21439562 | None:intergenic | 10.0% |
| !!! | ATTATGTATTTTTATAGTAT+AGG | + | chr5.1:21439850-21439869 | None:intergenic | 10.0% |
| !!! | CATTTTTAATAAAAATATCA+AGG | + | chr5.1:21436778-21436797 | None:intergenic | 10.0% |
| !!! | CTTAAAATATGTTTTAATAT+AGG | + | chr5.1:21441118-21441137 | None:intergenic | 10.0% |
| !!! | GTTTTGTATATTATTAATAA+GGG | + | chr5.1:21437422-21437441 | None:intergenic | 10.0% |
| !!! | TAAATTCTAAATATTTTGAT+TGG | + | chr5.1:21437257-21437276 | None:intergenic | 10.0% |
| !!! | TGTTTTGTATATTATTAATA+AGG | + | chr5.1:21437423-21437442 | None:intergenic | 10.0% |
| !!! | TTTTATATGTTTAAATCTAT+AGG | - | chr5.1:21439549-21439568 | MS.gene068621:intron | 10.0% |
| !! | AAAAATATATTGTAACAAAC+GGG | - | chr5.1:21440793-21440812 | MS.gene068621:intron | 15.0% |
| !! | AAAATTATTGGCATATATAT+TGG | - | chr5.1:21437453-21437472 | MS.gene068621:CDS | 15.0% |
| !! | AAATTATTGGCATATATATT+GGG | - | chr5.1:21437454-21437473 | MS.gene068621:CDS | 15.0% |
| !! | ATATAAATAGAGTTTATTGA+TGG | - | chr5.1:21437196-21437215 | MS.gene068621:CDS | 15.0% |
| !! | CAAAAATCATTTCATTTATT+TGG | - | chr5.1:21439733-21439752 | MS.gene068621:intron | 15.0% |
| !! | CATAATTGACATAAAATTAT+TGG | - | chr5.1:21437441-21437460 | MS.gene068621:CDS | 15.0% |
| !! | CTTCTTAAAAACTTAAATTA+TGG | + | chr5.1:21437121-21437140 | None:intergenic | 15.0% |
| !! | TAAAAGATAAAACTAAAGAT+CGG | - | chr5.1:21437160-21437179 | MS.gene068621:CDS | 15.0% |
| !! | TAGTAACTAAATAAAAACTA+AGG | + | chr5.1:21439081-21439100 | None:intergenic | 15.0% |
| !! | TATATAAAAATTTACCCAAA+TGG | + | chr5.1:21436604-21436623 | None:intergenic | 15.0% |
| !! | TTAAGTTCAAAATATTTCAA+CGG | + | chr5.1:21440411-21440430 | None:intergenic | 15.0% |
| !!! | AACAAAACATTTTTTTTTGA+AGG | - | chr5.1:21439768-21439787 | MS.gene068621:intron | 15.0% |
| !!! | AAGTTTTCATTTGTTTTTTA+TGG | + | chr5.1:21440732-21440751 | None:intergenic | 15.0% |
| !!! | CATAATTTAAGTTTTTAAGA+AGG | - | chr5.1:21437119-21437138 | MS.gene068621:CDS | 15.0% |
| !!! | GAAAAGTTGATATATTTATA+AGG | - | chr5.1:21436946-21436965 | MS.gene068621:intron | 15.0% |
| !! | AAAAATGTGAAATAGTACAT+AGG | + | chr5.1:21439285-21439304 | None:intergenic | 20.0% |
| !! | AAAGTCGAAAAAATATTTAG+AGG | - | chr5.1:21436914-21436933 | MS.gene068621:intron | 20.0% |
| !! | AACATTGTTCATTATGTTAT+AGG | - | chr5.1:21440897-21440916 | MS.gene068621:intron | 20.0% |
| !! | AAGTCGAAAAAATATTTAGA+GGG | - | chr5.1:21436915-21436934 | MS.gene068621:intron | 20.0% |
| !! | ATATGAAAAACAGAAACAAA+TGG | + | chr5.1:21436362-21436381 | None:intergenic | 20.0% |
| !! | ATATGGGTGTAATAAAAATA+TGG | - | chr5.1:21437349-21437368 | MS.gene068621:CDS | 20.0% |
| !! | ATATTAAACACGTAATTGAA+CGG | - | chr5.1:21439676-21439695 | MS.gene068621:intron | 20.0% |
| !! | ATTGTATTTCAAACTCAAAT+TGG | - | chr5.1:21439128-21439147 | MS.gene068621:intron | 20.0% |
| !! | TAAGTTCAAAATATTTCAAC+GGG | + | chr5.1:21440410-21440429 | None:intergenic | 20.0% |
| !! | TACAATTGCAAAATTGATAT+AGG | - | chr5.1:21437306-21437325 | MS.gene068621:CDS | 20.0% |
| !! | TATGGGTGTAATAAAAATAT+GGG | - | chr5.1:21437350-21437369 | MS.gene068621:CDS | 20.0% |
| !! | TGTAAAAGTTGTTTAGATTT+AGG | - | chr5.1:21439706-21439725 | MS.gene068621:intron | 20.0% |
| !! | TGTAAAATCATATTTCACAA+AGG | - | chr5.1:21436648-21436667 | MS.gene068621:CDS | 20.0% |
| !!! | AATTTTAAAATTTGATGCGA+TGG | + | chr5.1:21436561-21436580 | None:intergenic | 20.0% |
| !!! | ATCTAAATTTTTTTTACGGA+TGG | - | chr5.1:21436707-21436726 | MS.gene068621:intron | 20.0% |
| !!! | ATGATATTTTCATATGTCTA+AGG | - | chr5.1:21436795-21436814 | MS.gene068621:intron | 20.0% |
| !!! | GTTTGTTTGTTTATTTTTCT+TGG | - | chr5.1:21436867-21436886 | MS.gene068621:intron | 20.0% |
| !!! | TCTTTTATACAATTGTTTCT+TGG | - | chr5.1:21437648-21437667 | MS.gene068621:CDS | 20.0% |
| !!! | TGGCATCTAAATTTTTTTTA+CGG | - | chr5.1:21436703-21436722 | MS.gene068621:intron | 20.0% |
| !!! | TTAAAGTTGATATAGACTTA+TGG | - | chr5.1:21437382-21437401 | MS.gene068621:CDS | 20.0% |
| !!! | TTTTTTTAGATAAGCTGTTT+TGG | - | chr5.1:21438861-21438880 | MS.gene068621:intron | 20.0% |
| ! | AAAAATTTACCCAAATGGTA+TGG | + | chr5.1:21436599-21436618 | None:intergenic | 25.0% |
| ! | AAAATTTGTGTTGAGTTAAG+TGG | + | chr5.1:21436629-21436648 | None:intergenic | 25.0% |
| ! | AAATTTGTGTTGAGTTAAGT+GGG | + | chr5.1:21436628-21436647 | None:intergenic | 25.0% |
| ! | AAGATAGTGAAATAGTACAT+AGG | + | chr5.1:21437632-21437651 | None:intergenic | 25.0% |
| ! | AATAAACTAGAGTTACTTAG+TGG | - | chr5.1:21439198-21439217 | MS.gene068621:intron | 25.0% |
| ! | AATCTAGTAGAAAGTTAGTT+AGG | - | chr5.1:21437570-21437589 | MS.gene068621:intron | 25.0% |
| ! | ACAATAAAAGCTTATCAACA+AGG | - | chr5.1:21436400-21436419 | MS.gene068621:CDS | 25.0% |
| ! | ACTATAGTAGAAAGTTAGTT+AGG | - | chr5.1:21439223-21439242 | MS.gene068621:intron | 25.0% |
| ! | ATAAACAAACAAACAAGATG+TGG | + | chr5.1:21436861-21436880 | None:intergenic | 25.0% |
| ! | ATATTGTGGTATTTGTCATT+CGG | - | chr5.1:21439924-21439943 | MS.gene068621:intron | 25.0% |
| ! | ATCTAGTAGAAAGTTAGTTA+GGG | - | chr5.1:21437571-21437590 | MS.gene068621:intron | 25.0% |
| ! | CTATAGTAGAAAGTTAGTTA+GGG | - | chr5.1:21439224-21439243 | MS.gene068621:intron | 25.0% |
| ! | GTATCAAGTTCAAATTGATT+TGG | + | chr5.1:21437025-21437044 | None:intergenic | 25.0% |
| ! | TAAACAAACAAACAAGATGT+GGG | + | chr5.1:21436860-21436879 | None:intergenic | 25.0% |
| ! | TAAATAGAGTTTATTGATGG+TGG | - | chr5.1:21437199-21437218 | MS.gene068621:CDS | 25.0% |
| ! | TAAATTATCCCATTGTTGAT+TGG | - | chr5.1:21437085-21437104 | MS.gene068621:CDS | 25.0% |
| ! | TAGATTATGTAATTCTCTCT+AGG | + | chr5.1:21439333-21439352 | None:intergenic | 25.0% |
| ! | TTCTAATTCAATCTATGTGT+TGG | - | chr5.1:21439582-21439601 | MS.gene068621:intron | 25.0% |
| !! | ATTGTTTGAATTCGTTGATT+TGG | + | chr5.1:21438094-21438113 | None:intergenic | 25.0% |
| !! | CATTTTGTTCTTCAATTTCA+AGG | - | chr5.1:21438513-21438532 | MS.gene068621:intron | 25.0% |
| !!! | TATCGATTTGTTATTGACAT+TGG | - | chr5.1:21441326-21441345 | MS.gene068621:CDS | 25.0% |
| AAAACAATAGAAGCTCAAGA+TGG | + | chr5.1:21439030-21439049 | None:intergenic | 30.0% | |
| AAACAAACAAACAAGATGTG+GGG | + | chr5.1:21436859-21436878 | None:intergenic | 30.0% | |
| AAATTAACTCAAACACCATG+AGG | + | chr5.1:21436472-21436491 | None:intergenic | 30.0% | |
| AATTTCGATCCATACCATTT+GGG | - | chr5.1:21436587-21436606 | MS.gene068621:CDS | 30.0% | |
| AATTTGTGTTGAGTTAAGTG+GGG | + | chr5.1:21436627-21436646 | None:intergenic | 30.0% | |
| ACAAACGAAAACGAATTTGT+CGG | + | chr5.1:21438365-21438384 | None:intergenic | 30.0% | |
| ACCTCCAATTAAAGAAAATG+CGG | + | chr5.1:21441055-21441074 | None:intergenic | 30.0% | |
| AGATTATGTGAATAGTGCAA+TGG | - | chr5.1:21441277-21441296 | MS.gene068621:CDS | 30.0% | |
| AGTATAGTGAGAAGATAACT+TGG | - | chr5.1:21437538-21437557 | MS.gene068621:intron | 30.0% | |
| AGTGTCAATAATACCATCAA+AGG | + | chr5.1:21440935-21440954 | None:intergenic | 30.0% | |
| AGTTATTAAAAGCGAGCTAT+TGG | + | chr5.1:21440625-21440644 | None:intergenic | 30.0% | |
| ATGGGTTTATTGAAGAATCA+TGG | - | chr5.1:21440985-21441004 | MS.gene068621:intron | 30.0% | |
| ATTATGTTATAGGCTGCAAT+GGG | - | chr5.1:21440907-21440926 | MS.gene068621:intron | 30.0% | |
| ATTGATGGAACAATCACATA+TGG | - | chr5.1:21440273-21440292 | MS.gene068621:intron | 30.0% | |
| ATTGGAATAACCTCAATGTT+AGG | + | chr5.1:21441257-21441276 | None:intergenic | 30.0% | |
| GATTGTTCCATCAATATTCT+TGG | + | chr5.1:21440268-21440287 | None:intergenic | 30.0% | |
| GCACTATTCACATAATCTAT+TGG | + | chr5.1:21441275-21441294 | None:intergenic | 30.0% | |
| GCAGCTTATTTATAGTGATT+TGG | + | chr5.1:21439261-21439280 | None:intergenic | 30.0% | |
| GCCTTTACATAATAGAGAAA+GGG | + | chr5.1:21440083-21440102 | None:intergenic | 30.0% | |
| GTAGCTTATTTATAGTGACT+TGG | + | chr5.1:21437608-21437627 | None:intergenic | 30.0% | |
| TAATTTCGATCCATACCATT+TGG | - | chr5.1:21436586-21436605 | MS.gene068621:CDS | 30.0% | |
| TAGATTGTGTAATTCTCTCT+AGG | + | chr5.1:21437682-21437701 | None:intergenic | 30.0% | |
| TATCTAAAAAAACGCGTTTC+TGG | + | chr5.1:21438853-21438872 | None:intergenic | 30.0% | |
| TCAAAGATGATTCTCACATA+TGG | - | chr5.1:21440240-21440259 | MS.gene068621:intron | 30.0% | |
| TCCCTTTCTCTATTATGTAA+AGG | - | chr5.1:21440079-21440098 | MS.gene068621:intron | 30.0% | |
| TCTATAGTGTTATGAATCAG+AGG | + | chr5.1:21439390-21439409 | None:intergenic | 30.0% | |
| TGCCTTTACATAATAGAGAA+AGG | + | chr5.1:21440084-21440103 | None:intergenic | 30.0% | |
| TTCTTCAATAAACCCATCAA+AGG | + | chr5.1:21440982-21441001 | None:intergenic | 30.0% | |
| TTGTCAATTCTTCAAAATGC+TGG | - | chr5.1:21441142-21441161 | MS.gene068621:intron | 30.0% | |
| ! | AATTTCCACTTTGAGTTTGA+TGG | - | chr5.1:21439154-21439173 | MS.gene068621:intron | 30.0% |
| ! | ACAAATTCGTTTTCGTTTGT+GGG | - | chr5.1:21438365-21438384 | MS.gene068621:intron | 30.0% |
| ! | ATTAATTTTGCAGCCAAACA+TGG | - | chr5.1:21441224-21441243 | MS.gene068621:intron | 30.0% |
| ! | ATTTCCACTTTGAGTTTGAT+GGG | - | chr5.1:21439155-21439174 | MS.gene068621:intron | 30.0% |
| ! | CTGACTAGTTCATACAATAT+TGG | + | chr5.1:21436990-21437009 | None:intergenic | 30.0% |
| ! | GCATTCAAAGTACTATATTG+TGG | - | chr5.1:21439910-21439929 | MS.gene068621:intron | 30.0% |
| ! | TACCTTCTAGAGAATTTGAA+TGG | + | chr5.1:21436319-21436338 | None:intergenic | 30.0% |
| ! | TTTAAAATTTGATGCGATGG+AGG | + | chr5.1:21436558-21436577 | None:intergenic | 30.0% |
| !! | CATGGTAAACTTGTTATAGT+TGG | - | chr5.1:21441003-21441022 | MS.gene068621:intron | 30.0% |
| !! | GATTTTGGAAAAGCTAGTTT+AGG | - | chr5.1:21438775-21438794 | MS.gene068621:intron | 30.0% |
| !! | GGGAAAAGATTATTTTGTGA+TGG | + | chr5.1:21440063-21440082 | None:intergenic | 30.0% |
| !! | TATTTTGAACTTAACAAGCC+TGG | - | chr5.1:21440417-21440436 | MS.gene068621:intron | 30.0% |
| !! | TCGCAAATTTCAGTTGTTTT+CGG | - | chr5.1:21437874-21437893 | MS.gene068621:intron | 30.0% |
| !! | TTTATGATGTTAAGAGTACC+CGG | + | chr5.1:21440001-21440020 | None:intergenic | 30.0% |
| !!! | AATGTTGTTGTTGCTTTTCA+GGG | - | chr5.1:21439867-21439886 | MS.gene068621:intron | 30.0% |
| !!! | GTGAAATTTGCTAAAGCTTT+TGG | - | chr5.1:21440486-21440505 | MS.gene068621:intron | 30.0% |
| !!! | TAATGTTGTTGTTGCTTTTC+AGG | - | chr5.1:21439866-21439885 | MS.gene068621:intron | 30.0% |
| AAAGCGATTTCGCTTCAAAT+TGG | - | chr5.1:21438555-21438574 | MS.gene068621:intron | 35.0% | |
| AAAGTTCAAAGTTGGAGACA+CGG | - | chr5.1:21440146-21440165 | MS.gene068621:intron | 35.0% | |
| AACAACTGAAATTTGCGAAG+CGG | + | chr5.1:21437872-21437891 | None:intergenic | 35.0% | |
| AACATGGTATCAGAGCTTTA+TGG | - | chr5.1:21437748-21437767 | MS.gene068621:intron | 35.0% | |
| AAGGAAGCCATTGAACATTT+AGG | - | chr5.1:21440549-21440568 | MS.gene068621:intron | 35.0% | |
| AAGGTGACAAAGTTCAAAGT+TGG | - | chr5.1:21440138-21440157 | MS.gene068621:intron | 35.0% | |
| AATTCTTCAAAATGCTGGCA+GGG | - | chr5.1:21441147-21441166 | MS.gene068621:intron | 35.0% | |
| AGAACAAAATGATGCAGTTC+TGG | + | chr5.1:21438504-21438523 | None:intergenic | 35.0% | |
| AGTTACAAGCCAATCAACAA+TGG | + | chr5.1:21437097-21437116 | None:intergenic | 35.0% | |
| ATAAAACTAAAGATCGGACG+AGG | - | chr5.1:21437166-21437185 | MS.gene068621:CDS | 35.0% | |
| ATCAACTCCGAATCAAGAAT+CGG | + | chr5.1:21438063-21438082 | None:intergenic | 35.0% | |
| ATCTTCTTCTTCATCACCAT+TGG | + | chr5.1:21437815-21437834 | None:intergenic | 35.0% | |
| ATGCTTCGAATTCTTGATTG+CGG | + | chr5.1:21438145-21438164 | None:intergenic | 35.0% | |
| CATTATGTTATAGGCTGCAA+TGG | - | chr5.1:21440906-21440925 | MS.gene068621:intron | 35.0% | |
| CCTCCAATTAAAGAAAATGC+GGG | + | chr5.1:21441054-21441073 | None:intergenic | 35.0% | |
| CTCCATTCAAATTCTCTAGA+AGG | - | chr5.1:21436314-21436333 | MS.gene068621:CDS | 35.0% | |
| GAATCCTCTGATTCATAACA+TGG | - | chr5.1:21437732-21437751 | MS.gene068621:intron | 35.0% | |
| GATACCATGTTATGAATCAG+AGG | + | chr5.1:21437739-21437758 | None:intergenic | 35.0% | |
| GATGAAGAAGAAGATTCCAA+TGG | - | chr5.1:21437796-21437815 | MS.gene068621:intron | 35.0% | |
| GTTACAAGCCAATCAACAAT+GGG | + | chr5.1:21437096-21437115 | None:intergenic | 35.0% | |
| TAACTGTGTGAATCAAACGA+AGG | + | chr5.1:21438423-21438442 | None:intergenic | 35.0% | |
| TAGAGAATTTGAATGGAGAC+AGG | + | chr5.1:21436312-21436331 | None:intergenic | 35.0% | |
| TCTTCTTCTTCATCAGAAAC+TGG | + | chr5.1:21437790-21437809 | None:intergenic | 35.0% | |
| TGGTGAATGAATACATGTGT+AGG | + | chr5.1:21436342-21436361 | None:intergenic | 35.0% | |
| TGTGAATCAACGAGAAAACT+AGG | + | chr5.1:21437988-21438007 | None:intergenic | 35.0% | |
| TTATGAATCAGAGGATTCCA+TGG | + | chr5.1:21437730-21437749 | None:intergenic | 35.0% | |
| ! | AAATTCGTTTTCGTTTGTGG+GGG | - | chr5.1:21438367-21438386 | MS.gene068621:intron | 35.0% |
| ! | ACACTGATACTTTTACCTCA+TGG | - | chr5.1:21436454-21436473 | MS.gene068621:intron | 35.0% |
| ! | ATGTAAAGGCATGAAGTTTC+TGG | - | chr5.1:21440093-21440112 | MS.gene068621:intron | 35.0% |
| ! | CAAATTCGTTTTCGTTTGTG+GGG | - | chr5.1:21438366-21438385 | MS.gene068621:intron | 35.0% |
| ! | CTACTGGAATTGCATTTTCA+AGG | - | chr5.1:21438930-21438949 | MS.gene068621:intron | 35.0% |
| ! | CTTCCCGCATTTTCTTTAAT+TGG | - | chr5.1:21441048-21441067 | MS.gene068621:intron | 35.0% |
| ! | GACAAATTCGTTTTCGTTTG+TGG | - | chr5.1:21438364-21438383 | MS.gene068621:intron | 35.0% |
| ! | GATACTGTTTTCTCATGCTA+TGG | - | chr5.1:21438174-21438193 | MS.gene068621:intron | 35.0% |
| ! | GGAATTTGCTCCATTAACAT+GGG | - | chr5.1:21436736-21436755 | MS.gene068621:intron | 35.0% |
| ! | GTACTTTTGTCCCATGTTAA+TGG | + | chr5.1:21436749-21436768 | None:intergenic | 35.0% |
| ! | TAAACATGACTCTGAGAACA+AGG | + | chr5.1:21438701-21438720 | None:intergenic | 35.0% |
| ! | TCTATTTACCCTTTAGTTCC+CGG | - | chr5.1:21439979-21439998 | MS.gene068621:intron | 35.0% |
| ! | TGGAATTTGCTCCATTAACA+TGG | - | chr5.1:21436735-21436754 | MS.gene068621:intron | 35.0% |
| ! | TTTCCACTTTGAGTTTGATG+GGG | - | chr5.1:21439156-21439175 | MS.gene068621:intron | 35.0% |
| !! | ATTTCACATCAGCTTTGAGT+AGG | + | chr5.1:21441307-21441326 | None:intergenic | 35.0% |
| !! | GAAAACACCGATTCTTGATT+CGG | - | chr5.1:21438053-21438072 | MS.gene068621:intron | 35.0% |
| !! | GCATAAGGCATATGTTGTTT+TGG | - | chr5.1:21438811-21438830 | MS.gene068621:intron | 35.0% |
| !! | TTATGATGTTAAGAGTACCC+GGG | + | chr5.1:21440000-21440019 | None:intergenic | 35.0% |
| !!! | AAGCTGTTTTGGTTCAGATA+TGG | - | chr5.1:21438872-21438891 | MS.gene068621:intron | 35.0% |
| !!! | TTTCCCCATTTTGAGTTTGA+GGG | - | chr5.1:21437505-21437524 | MS.gene068621:intron | 35.0% |
| !!! | TTTTCCCCATTTTGAGTTTG+AGG | - | chr5.1:21437504-21437523 | MS.gene068621:intron | 35.0% |
| !!! | TTTTTTTACGGATGGCAAAC+TGG | - | chr5.1:21436715-21436734 | MS.gene068621:intron | 35.0% |
| AAAACCCAAGTCCCTCAAAT+TGG | - | chr5.1:21437478-21437497 | MS.gene068621:CDS | 40.0% | |
| AACAAGCCTGGTTTACATGT+GGG | - | chr5.1:21440429-21440448 | MS.gene068621:intron | 40.0% | |
| AACGTGAAGCTGATTGCTAA+CGG | + | chr5.1:21438256-21438275 | None:intergenic | 40.0% | |
| AATCACCAATTTGAGGGACT+TGG | + | chr5.1:21437486-21437505 | None:intergenic | 40.0% | |
| AGAACACAAGATTGCTGATG+CGG | + | chr5.1:21437848-21437867 | None:intergenic | 40.0% | |
| AGTTCTTTCCTCTATCCCAA+GGG | + | chr5.1:21438395-21438414 | None:intergenic | 40.0% | |
| ATCACCAATTTGAGGGACTT+GGG | + | chr5.1:21437485-21437504 | None:intergenic | 40.0% | |
| ATGGTGAATCCATCAGTTTC+TGG | + | chr5.1:21437949-21437968 | None:intergenic | 40.0% | |
| CAATTCTTCAAAATGCTGGC+AGG | - | chr5.1:21441146-21441165 | MS.gene068621:intron | 40.0% | |
| CATCCACTAATGCCTTTGAT+GGG | - | chr5.1:21440967-21440986 | MS.gene068621:intron | 40.0% | |
| CCATGCTTGATGAAGGTAAA+AGG | + | chr5.1:21436429-21436448 | None:intergenic | 40.0% | |
| CTAGGTCAAATGCAATGGAA+AGG | + | chr5.1:21437705-21437724 | None:intergenic | 40.0% | |
| CTGTCGTTCAACAACAATAG+TGG | + | chr5.1:21438647-21438666 | None:intergenic | 40.0% | |
| GAGTATGATTGGAGGGATAA+AGG | - | chr5.1:21441187-21441206 | MS.gene068621:intron | 40.0% | |
| GATGGAACAATCACATATGG+AGG | - | chr5.1:21440276-21440295 | MS.gene068621:intron | 40.0% | |
| GGAAACAGGAGAAAAAGATG+TGG | - | chr5.1:21439888-21439907 | MS.gene068621:intron | 40.0% | |
| GGGGAAAATCACCAATTTGA+GGG | + | chr5.1:21437492-21437511 | None:intergenic | 40.0% | |
| GTCAGCTCCTAAATGTTCAA+TGG | + | chr5.1:21440559-21440578 | None:intergenic | 40.0% | |
| GTTAGGTTTCACACCATGTT+TGG | + | chr5.1:21441240-21441259 | None:intergenic | 40.0% | |
| GTTGTTGAACGACAGTGATA+TGG | - | chr5.1:21438652-21438671 | MS.gene068621:intron | 40.0% | |
| TAACAAGCCTGGTTTACATG+TGG | - | chr5.1:21440428-21440447 | MS.gene068621:intron | 40.0% | |
| TATGGCGCCAAGAATATTGA+TGG | - | chr5.1:21440258-21440277 | MS.gene068621:intron | 40.0% | |
| TATTGGTATGCACCTGCATT+TGG | + | chr5.1:21440608-21440627 | None:intergenic | 40.0% | |
| TGAAGAAACGTGAGTGGAAA+CGG | + | chr5.1:21437914-21437933 | None:intergenic | 40.0% | |
| TGGGGAAAATCACCAATTTG+AGG | + | chr5.1:21437493-21437512 | None:intergenic | 40.0% | |
| TGGTGTGAAACCTAACATTG+AGG | - | chr5.1:21441244-21441263 | MS.gene068621:intron | 40.0% | |
| TTGCATTTGACCTAGAACCA+TGG | - | chr5.1:21437710-21437729 | MS.gene068621:intron | 40.0% | |
| ! | CCCGCATTTTCTTTAATTGG+AGG | - | chr5.1:21441051-21441070 | MS.gene068621:intron | 40.0% |
| ! | CCTTTTACCTTCATCAAGCA+TGG | - | chr5.1:21436426-21436445 | MS.gene068621:intron | 40.0% |
| ! | CTATTTACCCTTTAGTTCCC+GGG | - | chr5.1:21439980-21439999 | MS.gene068621:intron | 40.0% |
| ! | GATGGATTCACCATCAAGAT+CGG | - | chr5.1:21437955-21437974 | MS.gene068621:intron | 40.0% |
| ! | GGACAAACGTGTTTTGCATA+AGG | - | chr5.1:21438796-21438815 | MS.gene068621:intron | 40.0% |
| ! | TTTAGGAGCTGACTCATTTG+TGG | - | chr5.1:21440566-21440585 | MS.gene068621:intron | 40.0% |
| ! | TTTTAGTCCCCAAACGATGT+GGG | + | chr5.1:21436897-21436916 | None:intergenic | 40.0% |
| !! | AAACCCATCAAAGGCATTAG+TGG | + | chr5.1:21440973-21440992 | None:intergenic | 40.0% |
| !! | AGTTTCTGGTGAAGTGACAA+AGG | - | chr5.1:21440107-21440126 | MS.gene068621:intron | 40.0% |
| !! | ATCACAGTTCTGAATGTGTC+TGG | - | chr5.1:21438600-21438619 | MS.gene068621:intron | 40.0% |
| !! | TCACAGTTCTGAATGTGTCT+GGG | - | chr5.1:21438601-21438620 | MS.gene068621:intron | 40.0% |
| !! | TCAGTTGTTTTCGGTAGCTT+TGG | - | chr5.1:21437883-21437902 | MS.gene068621:intron | 40.0% |
| !! | TCTTGGTGGATTAGGTCATA+TGG | - | chr5.1:21440461-21440480 | MS.gene068621:intron | 40.0% |
| !! | TGGTTCTAGGTCAAATGCAA+TGG | + | chr5.1:21437710-21437729 | None:intergenic | 40.0% |
| !!! | CAACTCTGTTTTTGACGCTT+CGG | - | chr5.1:21438020-21438039 | MS.gene068621:intron | 40.0% |
| !!! | TCAATCGTCGATTTTGATCC+CGG | - | chr5.1:21438294-21438313 | MS.gene068621:intron | 40.0% |
| !!! | TTCCCCATTTTGAGTTTGAG+GGG | - | chr5.1:21437506-21437525 | MS.gene068621:intron | 40.0% |
| !!! | TTGTTGCTTTTCAGGGAAAC+AGG | - | chr5.1:21439874-21439893 | MS.gene068621:intron | 40.0% |
| AAACTAAAGATCGGACGAGG+AGG | - | chr5.1:21437169-21437188 | MS.gene068621:CDS | 45.0% | |
| AACTAAAGATCGGACGAGGA+GGG | - | chr5.1:21437170-21437189 | MS.gene068621:CDS | 45.0% | |
| ACAACTTTGACATGAGTGGC+AGG | + | chr5.1:21440196-21440215 | None:intergenic | 45.0% | |
| ACACAGACCAATTCTTCCAC+CGG | + | chr5.1:21438316-21438335 | None:intergenic | 45.0% | |
| AGCGCGTTTAAGAAAGCTAC+TGG | - | chr5.1:21438914-21438933 | MS.gene068621:intron | 45.0% | |
| AGTCCCCATCAAACTCAAAG+TGG | + | chr5.1:21439162-21439181 | None:intergenic | 45.0% | |
| AGTCCCCCTCAAACTCAAAA+TGG | + | chr5.1:21437513-21437532 | None:intergenic | 45.0% | |
| ATCCTAACAAGGCTTTCGGA+TGG | - | chr5.1:21436263-21436282 | MS.gene068621:CDS | 45.0% | |
| CACCACAACTTTGACATGAG+TGG | + | chr5.1:21440200-21440219 | None:intergenic | 45.0% | |
| CAGTTCTTTCCTCTATCCCA+AGG | + | chr5.1:21438396-21438415 | None:intergenic | 45.0% | |
| CCATCCACTAATGCCTTTGA+TGG | - | chr5.1:21440966-21440985 | MS.gene068621:intron | 45.0% | |
| GAGCATCCTAACAAGGCTTT+CGG | - | chr5.1:21436259-21436278 | MS.gene068621:CDS | 45.0% | |
| GATTCACACAGTTATCGCGA+GGG | - | chr5.1:21438429-21438448 | MS.gene068621:intron | 45.0% | |
| GTATCAGCCATGCTTGATGA+AGG | + | chr5.1:21436436-21436455 | None:intergenic | 45.0% | |
| GTCCCCCTCAAACTCAAAAT+GGG | + | chr5.1:21437512-21437531 | None:intergenic | 45.0% | |
| TCAGAGGATTCCATGGTTCT+AGG | + | chr5.1:21437723-21437742 | None:intergenic | 45.0% | |
| TCCCCCTCAAACTCAAAATG+GGG | + | chr5.1:21437511-21437530 | None:intergenic | 45.0% | |
| TCCTAACAAGGCTTTCGGAT+GGG | - | chr5.1:21436264-21436283 | MS.gene068621:CDS | 45.0% | |
| TCTGGTGAAGTGACAAAGGT+GGG | - | chr5.1:21440111-21440130 | MS.gene068621:intron | 45.0% | |
| TGATTCACACAGTTATCGCG+AGG | - | chr5.1:21438428-21438447 | MS.gene068621:intron | 45.0% | |
| TGCCACTCATGTCAAAGTTG+TGG | - | chr5.1:21440195-21440214 | MS.gene068621:intron | 45.0% | |
| TTCAAAGTTGGAGACACGGT+AGG | - | chr5.1:21440150-21440169 | MS.gene068621:intron | 45.0% | |
| TTCTGGTGAAGTGACAAAGG+TGG | - | chr5.1:21440110-21440129 | MS.gene068621:intron | 45.0% | |
| TTCTGTCTTCGTCGGAAAAC+AGG | - | chr5.1:21438212-21438231 | MS.gene068621:intron | 45.0% | |
| TTGTTAGGATGCTCCATCTC+TGG | + | chr5.1:21436253-21436272 | None:intergenic | 45.0% | |
| TTTAGTCCCCAAACGATGTG+GGG | + | chr5.1:21436896-21436915 | None:intergenic | 45.0% | |
| TTTGATCCCGGTGGAAGAAT+TGG | - | chr5.1:21438306-21438325 | MS.gene068621:intron | 45.0% | |
| ! | ACTCCTCTCAGCTTTCGTTT+TGG | - | chr5.1:21438976-21438995 | MS.gene068621:intron | 45.0% |
| ! | AGAGATGGAGCATCCTAACA+AGG | - | chr5.1:21436252-21436271 | MS.gene068621:CDS | 45.0% |
| ! | ATGATTGGCGGGAGTATGAT+TGG | - | chr5.1:21441176-21441195 | MS.gene068621:intron | 45.0% |
| ! | CTCCTCTCAGCTTTCGTTTT+GGG | - | chr5.1:21438977-21438996 | MS.gene068621:intron | 45.0% |
| ! | CTTTTAGTCCCCAAACGATG+TGG | + | chr5.1:21436898-21436917 | None:intergenic | 45.0% |
| ! | GGAGAGTTCGGTTCAGATTT+TGG | - | chr5.1:21438760-21438779 | MS.gene068621:intron | 45.0% |
| ! | GTGGTAAGGCATCAGGAATA+CGG | + | chr5.1:21440341-21440360 | None:intergenic | 45.0% |
| !! | AAGACAGAAGCGTCGTAAAC+AGG | + | chr5.1:21438201-21438220 | None:intergenic | 45.0% |
| !! | AAGAGTACCCGGGAACTAAA+GGG | + | chr5.1:21439990-21440009 | None:intergenic | 45.0% |
| !! | ATCGTGTTACAGAAGCGTCT+TGG | - | chr5.1:21438739-21438758 | MS.gene068621:intron | 45.0% |
| !! | CCATCAAAGGCATTAGTGGA+TGG | + | chr5.1:21440969-21440988 | None:intergenic | 45.0% |
| !! | TAAGAGTACCCGGGAACTAA+AGG | + | chr5.1:21439991-21440010 | None:intergenic | 45.0% |
| !!! | GTTGTTTTCGGTAGCTTTGG+CGG | - | chr5.1:21437886-21437905 | MS.gene068621:intron | 45.0% |
| !!! | TCCCCATTTTGAGTTTGAGG+GGG | - | chr5.1:21437507-21437526 | MS.gene068621:intron | 45.0% |
| !! | AATGTTTAAATAAAATATAT+AGG | + | chr5.1:21436505-21436524 | None:intergenic | 5.0% |
| !! | ATGTTTAAATAAAATATATA+GGG | + | chr5.1:21436504-21436523 | None:intergenic | 5.0% |
| !!! | ATTATCTTTTAAAAAAAATA+TGG | - | chr5.1:21437332-21437351 | MS.gene068621:CDS | 5.0% |
| !!! | TTAAAATATGTTTTAATATA+GGG | + | chr5.1:21441117-21441136 | None:intergenic | 5.0% |
| !!! | TTATCTTTTAAAAAAAATAT+GGG | - | chr5.1:21437333-21437352 | MS.gene068621:CDS | 5.0% |
| ACCACACCCACATGTAAACC+AGG | + | chr5.1:21440438-21440457 | None:intergenic | 50.0% | |
| AGCAACGGCATCAAGTGGTA+AGG | + | chr5.1:21440355-21440374 | None:intergenic | 50.0% | |
| AGGAACGTCACCGATCTTGA+TGG | + | chr5.1:21437968-21437987 | None:intergenic | 50.0% | |
| AGTGACAAAGGTGGGAAGCA+AGG | - | chr5.1:21440119-21440138 | MS.gene068621:intron | 50.0% | |
| CACAGACCAATTCTTCCACC+GGG | + | chr5.1:21438315-21438334 | None:intergenic | 50.0% | |
| CACATGCTGAAGAACGAGTG+GGG | - | chr5.1:21439952-21439971 | MS.gene068621:intron | 50.0% | |
| CAGGGAGAAAGATGATTGGC+GGG | - | chr5.1:21441165-21441184 | MS.gene068621:intron | 50.0% | |
| CCACATGCTGAAGAACGAGT+GGG | - | chr5.1:21439951-21439970 | MS.gene068621:intron | 50.0% | |
| CCACGAACAAGACCAAATGC+AGG | - | chr5.1:21440593-21440612 | MS.gene068621:intron | 50.0% | |
| CCACTCACGTTTCTTCACCA+TGG | - | chr5.1:21437917-21437936 | MS.gene068621:intron | 50.0% | |
| CCATGGTGAAGAAACGTGAG+TGG | + | chr5.1:21437920-21437939 | None:intergenic | 50.0% | |
| CTGAATGTGTCTGGGTGCAA+TGG | - | chr5.1:21438609-21438628 | MS.gene068621:intron | 50.0% | |
| CTGGCAGGGAGAAAGATGAT+TGG | - | chr5.1:21441161-21441180 | MS.gene068621:intron | 50.0% | |
| GAAAATGCGGGAAGCTCCAA+AGG | + | chr5.1:21441042-21441061 | None:intergenic | 50.0% | |
| GCAGGGAGAAAGATGATTGG+CGG | - | chr5.1:21441164-21441183 | MS.gene068621:intron | 50.0% | |
| GGTTTACATGTGGGTGTGGT+TGG | - | chr5.1:21440438-21440457 | MS.gene068621:intron | 50.0% | |
| TACGACGCTTCTGTCTTCGT+CGG | - | chr5.1:21438204-21438223 | MS.gene068621:intron | 50.0% | |
| TCCACATGCTGAAGAACGAG+TGG | - | chr5.1:21439950-21439969 | MS.gene068621:intron | 50.0% | |
| TGGAGGCTACTCTGATACCA+TGG | - | chr5.1:21440293-21440312 | MS.gene068621:intron | 50.0% | |
| TGGATCGCACCAGAAACTGA+TGG | - | chr5.1:21437937-21437956 | MS.gene068621:intron | 50.0% | |
| TTGGAGTCCCCACATCGTTT+GGG | - | chr5.1:21436886-21436905 | MS.gene068621:intron | 50.0% | |
| ! | ACGGATCACGAAGTGTTCGT+CGG | + | chr5.1:21440322-21440341 | None:intergenic | 50.0% |
| ! | ATTGGCGGGAGTATGATTGG+AGG | - | chr5.1:21441179-21441198 | MS.gene068621:intron | 50.0% |
| ! | GCATCAAGTGGTAAGGCATC+AGG | + | chr5.1:21440348-21440367 | None:intergenic | 50.0% |
| ! | TTGGCGGGAGTATGATTGGA+GGG | - | chr5.1:21441180-21441199 | MS.gene068621:intron | 50.0% |
| !! | CAGAAGCGTCTTGGAGAGTT+CGG | - | chr5.1:21438748-21438767 | MS.gene068621:intron | 50.0% |
| !! | CCTGCATTTGGTCTTGTTCG+TGG | + | chr5.1:21440596-21440615 | None:intergenic | 50.0% |
| !! | GTGGTTGGTCTTGGTGGATT+AGG | - | chr5.1:21440453-21440472 | MS.gene068621:intron | 50.0% |
| !! | TCAGTTTCTGGTGCGATCCA+TGG | + | chr5.1:21437937-21437956 | None:intergenic | 50.0% |
| !!! | ATCGTCGATTTTGATCCCGG+TGG | - | chr5.1:21438297-21438316 | MS.gene068621:intron | 50.0% |
| AGAGGAGCAACGGCATCAAG+TGG | + | chr5.1:21440360-21440379 | None:intergenic | 55.0% | |
| AGTTGGAGACACGGTAGGTG+TGG | - | chr5.1:21440155-21440174 | MS.gene068621:intron | 55.0% | |
| CAGAGATGTTGAGCAAGCGC+AGG | + | chr5.1:21439003-21439022 | None:intergenic | 55.0% | |
| CCCACTCGTTCTTCAGCATG+TGG | + | chr5.1:21439954-21439973 | None:intergenic | 55.0% | |
| CGCGCAAAGAAGAGGAGCAA+CGG | + | chr5.1:21440370-21440389 | None:intergenic | 55.0% | |
| CGTTGCTCCTCTTCTTTGCG+CGG | - | chr5.1:21440368-21440387 | MS.gene068621:intron | 55.0% | |
| CTGCGCTTGCTCAACATCTC+TGG | - | chr5.1:21439001-21439020 | MS.gene068621:intron | 55.0% | |
| CTTGGAGTCCCCACATCGTT+TGG | - | chr5.1:21436885-21436904 | MS.gene068621:intron | 55.0% | |
| GCCTGGTTTACATGTGGGTG+TGG | - | chr5.1:21440434-21440453 | MS.gene068621:intron | 55.0% | |
| GCTGCAATGGGCACCTTTGA+TGG | - | chr5.1:21440919-21440938 | MS.gene068621:intron | 55.0% | |
| GGAAGCTCCAAAGGCTTCTC+TGG | + | chr5.1:21441033-21441052 | None:intergenic | 55.0% | |
| GGCCCAAAACGAAAGCTGAG+AGG | + | chr5.1:21438982-21439001 | None:intergenic | 55.0% | |
| GTTGCTCCTCTTCTTTGCGC+GGG | - | chr5.1:21440369-21440388 | MS.gene068621:intron | 55.0% | |
| GTTGGAGACACGGTAGGTGT+GGG | - | chr5.1:21440156-21440175 | MS.gene068621:intron | 55.0% | |
| TCACACAGTTATCGCGAGGG+AGG | - | chr5.1:21438432-21438451 | MS.gene068621:intron | 55.0% | |
| TCGTTTGTGGGGGATCCCTT+GGG | - | chr5.1:21438377-21438396 | MS.gene068621:intron | 55.0% | |
| TGGAGCTCCAGAGAAGCCTT+TGG | - | chr5.1:21441023-21441042 | MS.gene068621:intron | 55.0% | |
| TGGAGTCCCCACATCGTTTG+GGG | - | chr5.1:21436887-21436906 | MS.gene068621:intron | 55.0% | |
| TTCGTTTGTGGGGGATCCCT+TGG | - | chr5.1:21438376-21438395 | MS.gene068621:intron | 55.0% | |
| TTGCTCCTCTTCTTTGCGCG+GGG | - | chr5.1:21440370-21440389 | MS.gene068621:intron | 55.0% | |
| TTGGAGACACGGTAGGTGTG+GGG | - | chr5.1:21440157-21440176 | MS.gene068621:intron | 55.0% | |
| ! | GAAGTGTTCGTCGGCAACCA+TGG | + | chr5.1:21440313-21440332 | None:intergenic | 55.0% |
| !! | CATGTGGGTGTGGTTGGTCT+TGG | - | chr5.1:21440444-21440463 | MS.gene068621:intron | 55.0% |
| !! | GCCCATCCGAAAGCCTTGTT+AGG | + | chr5.1:21436268-21436287 | None:intergenic | 55.0% |
| AGGCTTTCGGATGGGCAGCT+AGG | - | chr5.1:21436272-21436291 | MS.gene068621:CDS | 60.0% | |
| GGCTTTCGGATGGGCAGCTA+GGG | - | chr5.1:21436273-21436292 | MS.gene068621:CDS | 60.0% | |
| GTAGGTGTGGGGTGCATGGT+TGG | - | chr5.1:21440168-21440187 | MS.gene068621:intron | 60.0% | |
| GTGATCCCCGCGCAAAGAAG+AGG | + | chr5.1:21440378-21440397 | None:intergenic | 60.0% | |
| TGGGCAGCTAGGGACTCATC+TGG | - | chr5.1:21436283-21436302 | MS.gene068621:CDS | 60.0% | |
| TGGGGGATCCCTTGGGATAG+AGG | - | chr5.1:21438384-21438403 | MS.gene068621:intron | 60.0% | |
| !! | GTGGGTGTGGTTGGTCTTGG+TGG | - | chr5.1:21440447-21440466 | MS.gene068621:intron | 60.0% |
| CACGGTAGGTGTGGGGTGCA+TGG | - | chr5.1:21440164-21440183 | MS.gene068621:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 21436238 | 21441373 | 21436238 | ID=MS.gene068621 |
| chr5.1 | mRNA | 21436238 | 21441373 | 21436238 | ID=MS.gene068621.t1;Parent=MS.gene068621 |
| chr5.1 | exon | 21441276 | 21441373 | 21441276 | ID=MS.gene068621.t1.exon1;Parent=MS.gene068621.t1 |
| chr5.1 | CDS | 21441276 | 21441373 | 21441276 | ID=cds.MS.gene068621.t1;Parent=MS.gene068621.t1 |
| chr5.1 | exon | 21437610 | 21437723 | 21437610 | ID=MS.gene068621.t1.exon2;Parent=MS.gene068621.t1 |
| chr5.1 | CDS | 21437610 | 21437723 | 21437610 | ID=cds.MS.gene068621.t1;Parent=MS.gene068621.t1 |
| chr5.1 | exon | 21436997 | 21437510 | 21436997 | ID=MS.gene068621.t1.exon3;Parent=MS.gene068621.t1 |
| chr5.1 | CDS | 21436997 | 21437510 | 21436997 | ID=cds.MS.gene068621.t1;Parent=MS.gene068621.t1 |
| chr5.1 | exon | 21436539 | 21436692 | 21436539 | ID=MS.gene068621.t1.exon4;Parent=MS.gene068621.t1 |
| chr5.1 | CDS | 21436539 | 21436692 | 21436539 | ID=cds.MS.gene068621.t1;Parent=MS.gene068621.t1 |
| chr5.1 | exon | 21436238 | 21436443 | 21436238 | ID=MS.gene068621.t1.exon5;Parent=MS.gene068621.t1 |
| chr5.1 | CDS | 21436238 | 21436443 | 21436238 | ID=cds.MS.gene068621.t1;Parent=MS.gene068621.t1 |
| Gene Sequence |
| Protein sequence |
