Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069154.t1 | XP_003612972.2 | 98.1 | 361 | 7 | 0 | 1 | 361 | 1 | 361 | 6.80E-205 | 723 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069154.t1 | Q9ZRF1 | 78.4 | 356 | 77 | 0 | 6 | 361 | 4 | 359 | 2.2e-167 | 589.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069154.t1 | G7KGH5 | 98.1 | 361 | 7 | 0 | 1 | 361 | 1 | 361 | 4.9e-205 | 723.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene069154 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene069154 | 0.802815 | 4.69E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene069154 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene069154 | 0.855422 | 6.38E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene069154 | 0.804793 | 1.82E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene069154 | 0.846777 | 1.76E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene069154 | 0.871593 | 6.07E-67 | -1.69E-46 |
| MS.gene051588 | MS.gene069154 | 0.836328 | 9.98E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene069154 | 0.806441 | 8.21E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene069154 | 0.82583 | 3.78E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene069154 | 0.807901 | 4.03E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene069154 | 0.820035 | 8.48E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene069154 | 0.808802 | 2.59E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene069154 | 0.805475 | 1.31E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene069154 | 0.811855 | 5.68E-51 | -1.69E-46 |
| MS.gene054918 | MS.gene069154 | 0.840396 | 8.92E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene069154 | 0.859219 | 4.81E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene069154 | 0.830732 | 2.49E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene069154 | 0.856196 | 3.79E-62 | -1.69E-46 |
| MS.gene055564 | MS.gene069154 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene069154 | 0.829137 | 6.09E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene069154 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene069154 | 0.809144 | 2.19E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene069154 | 0.812723 | 3.67E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene069154 | 0.801539 | 8.58E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene069154 | 0.807001 | 6.25E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene069154 | 0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene069154 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene069154 | 0.850769 | 1.37E-60 | -1.69E-46 |
| MS.gene05886 | MS.gene069154 | 0.825595 | 4.30E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene069154 | 0.819862 | 9.29E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene069154 | 0.813901 | 2.02E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene069154 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene069154 | 0.820078 | 8.29E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene069154 | 0.825735 | 3.99E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene069154 | 0.805713 | 1.17E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene069154 | 0.808684 | 2.74E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene069154 | 0.82754 | 1.48E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene069154 | 0.814756 | 1.31E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene069154 | 0.852388 | 4.77E-61 | -1.69E-46 |
| MS.gene061159 | MS.gene069154 | 0.850124 | 2.08E-60 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069154.t1 | MTR_5g031180 | 98.061 | 361 | 7 | 0 | 1 | 361 | 1 | 361 | 0.0 | 724 |
| MS.gene069154.t1 | MTR_5g031190 | 85.873 | 361 | 51 | 0 | 1 | 361 | 1 | 361 | 0.0 | 637 |
| MS.gene069154.t1 | MTR_8g068190 | 83.889 | 360 | 58 | 0 | 1 | 360 | 1 | 360 | 0.0 | 590 |
| MS.gene069154.t1 | MTR_5g031250 | 79.501 | 361 | 74 | 0 | 1 | 361 | 1 | 361 | 0.0 | 582 |
| MS.gene069154.t1 | MTR_5g031230 | 78.670 | 361 | 77 | 0 | 1 | 361 | 1 | 361 | 0.0 | 580 |
| MS.gene069154.t1 | MTR_5g031310 | 79.661 | 354 | 72 | 0 | 7 | 360 | 8 | 361 | 0.0 | 579 |
| MS.gene069154.t1 | MTR_5g031305 | 79.661 | 354 | 72 | 0 | 7 | 360 | 8 | 361 | 0.0 | 577 |
| MS.gene069154.t1 | MTR_5g031390 | 77.839 | 361 | 80 | 0 | 1 | 361 | 1 | 361 | 0.0 | 573 |
| MS.gene069154.t1 | MTR_4g115300 | 77.008 | 361 | 83 | 0 | 1 | 361 | 1 | 361 | 0.0 | 570 |
| MS.gene069154.t1 | MTR_5g031300 | 76.901 | 355 | 82 | 0 | 7 | 361 | 8 | 362 | 0.0 | 564 |
| MS.gene069154.t1 | MTR_5g031360 | 77.778 | 351 | 78 | 0 | 10 | 360 | 12 | 362 | 0.0 | 556 |
| MS.gene069154.t1 | MTR_5g031210 | 76.454 | 361 | 85 | 0 | 1 | 361 | 1 | 361 | 0.0 | 548 |
| MS.gene069154.t1 | MTR_8g092630 | 62.640 | 356 | 132 | 1 | 4 | 359 | 61 | 415 | 5.28e-150 | 429 |
| MS.gene069154.t1 | MTR_5g031430 | 61.625 | 357 | 135 | 1 | 2 | 358 | 4 | 358 | 1.65e-148 | 423 |
| MS.gene069154.t1 | MTR_1g025950 | 58.757 | 354 | 145 | 1 | 8 | 360 | 7 | 360 | 2.34e-137 | 395 |
| MS.gene069154.t1 | MTR_5g031250 | 78.423 | 241 | 52 | 0 | 1 | 241 | 1 | 241 | 4.01e-136 | 388 |
| MS.gene069154.t1 | MTR_2g009810 | 54.624 | 346 | 155 | 2 | 14 | 358 | 62 | 406 | 1.03e-120 | 355 |
| MS.gene069154.t1 | MTR_1g107425 | 52.507 | 339 | 161 | 0 | 15 | 353 | 13 | 351 | 2.26e-120 | 352 |
| MS.gene069154.t1 | MTR_1g107425 | 54.779 | 272 | 123 | 0 | 15 | 286 | 13 | 284 | 6.82e-97 | 290 |
| MS.gene069154.t1 | MTR_2g009820 | 51.417 | 247 | 116 | 3 | 116 | 358 | 8 | 254 | 3.48e-68 | 215 |
| MS.gene069154.t1 | MTR_5g031290 | 75.439 | 114 | 28 | 0 | 247 | 360 | 80 | 193 | 3.22e-55 | 179 |
| MS.gene069154.t1 | MTR_5g031290 | 81.250 | 80 | 14 | 1 | 1 | 79 | 1 | 80 | 3.27e-40 | 140 |
| MS.gene069154.t1 | MTR_8g095220 | 26.786 | 280 | 175 | 7 | 25 | 278 | 68 | 343 | 8.92e-23 | 99.0 |
| MS.gene069154.t1 | MTR_8g095220 | 28.099 | 242 | 149 | 6 | 25 | 245 | 68 | 305 | 4.65e-22 | 95.5 |
| MS.gene069154.t1 | MTR_3g089977 | 23.851 | 348 | 228 | 12 | 39 | 354 | 37 | 379 | 1.38e-17 | 83.6 |
| MS.gene069154.t1 | MTR_3g089940 | 23.964 | 338 | 221 | 11 | 39 | 344 | 37 | 370 | 4.40e-17 | 82.0 |
| MS.gene069154.t1 | MTR_3g089940 | 23.964 | 338 | 221 | 11 | 39 | 344 | 37 | 370 | 4.52e-17 | 82.0 |
| MS.gene069154.t1 | MTR_0001s0660 | 26.316 | 304 | 196 | 12 | 38 | 318 | 35 | 333 | 6.00e-16 | 79.3 |
| MS.gene069154.t1 | MTR_1g069430 | 24.852 | 338 | 221 | 10 | 1 | 312 | 1 | 331 | 2.10e-15 | 77.0 |
| MS.gene069154.t1 | MTR_3g089970 | 23.373 | 338 | 223 | 11 | 39 | 344 | 38 | 371 | 2.44e-15 | 77.0 |
| MS.gene069154.t1 | MTR_7g099040 | 25.220 | 341 | 207 | 12 | 38 | 340 | 37 | 367 | 7.05e-15 | 75.5 |
| MS.gene069154.t1 | MTR_7g068320 | 26.934 | 349 | 218 | 14 | 39 | 353 | 48 | 393 | 2.98e-14 | 73.9 |
| MS.gene069154.t1 | MTR_3g089940 | 23.529 | 306 | 206 | 9 | 39 | 319 | 37 | 339 | 3.22e-14 | 73.6 |
| MS.gene069154.t1 | MTR_3g089940 | 24.719 | 267 | 176 | 7 | 39 | 282 | 37 | 301 | 4.46e-14 | 72.8 |
| MS.gene069154.t1 | MTR_3g099460 | 27.988 | 343 | 201 | 14 | 39 | 342 | 44 | 379 | 3.33e-13 | 70.5 |
| MS.gene069154.t1 | MTR_3g099460 | 27.988 | 343 | 201 | 14 | 39 | 342 | 37 | 372 | 3.35e-13 | 70.5 |
| MS.gene069154.t1 | MTR_5g087710 | 24.412 | 340 | 219 | 11 | 39 | 344 | 46 | 381 | 6.54e-13 | 69.7 |
| MS.gene069154.t1 | MTR_7g068330 | 27.246 | 345 | 198 | 14 | 39 | 341 | 41 | 374 | 1.70e-11 | 65.5 |
| MS.gene069154.t1 | MTR_5g045710 | 25.837 | 209 | 140 | 3 | 38 | 233 | 35 | 241 | 2.32e-11 | 64.7 |
| MS.gene069154.t1 | MTR_6g068930 | 24.471 | 331 | 215 | 12 | 39 | 343 | 38 | 359 | 5.51e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069154.t1 | AT4G37970 | 66.480 | 358 | 120 | 0 | 3 | 360 | 4 | 361 | 9.54e-172 | 483 |
| MS.gene069154.t1 | AT4G37980 | 71.060 | 349 | 101 | 0 | 12 | 360 | 8 | 356 | 2.37e-170 | 479 |
| MS.gene069154.t1 | AT4G37990 | 72.622 | 347 | 95 | 0 | 12 | 358 | 8 | 354 | 1.04e-169 | 477 |
| MS.gene069154.t1 | AT4G39330 | 63.305 | 357 | 131 | 0 | 1 | 357 | 1 | 357 | 2.25e-167 | 471 |
| MS.gene069154.t1 | AT2G21730 | 62.323 | 353 | 131 | 2 | 7 | 357 | 1 | 353 | 3.79e-157 | 446 |
| MS.gene069154.t1 | AT2G21890 | 61.648 | 352 | 134 | 1 | 7 | 357 | 1 | 352 | 4.57e-156 | 443 |
| MS.gene069154.t1 | AT4G39330 | 63.036 | 303 | 112 | 0 | 1 | 303 | 1 | 303 | 1.78e-137 | 394 |
| MS.gene069154.t1 | AT4G37970 | 65.085 | 295 | 103 | 0 | 3 | 297 | 4 | 298 | 9.18e-134 | 384 |
| MS.gene069154.t1 | AT4G37980 | 70.732 | 287 | 84 | 0 | 12 | 298 | 8 | 294 | 1.49e-132 | 380 |
| MS.gene069154.t1 | AT1G72680 | 50.575 | 348 | 171 | 1 | 11 | 358 | 9 | 355 | 2.37e-115 | 339 |
| MS.gene069154.t1 | AT3G19450 | 53.623 | 345 | 160 | 0 | 12 | 356 | 10 | 354 | 1.09e-114 | 338 |
| MS.gene069154.t1 | AT4G37970 | 65.000 | 240 | 84 | 0 | 3 | 242 | 4 | 243 | 4.94e-107 | 314 |
| MS.gene069154.t1 | AT4G37970 | 65.000 | 240 | 84 | 0 | 3 | 242 | 4 | 243 | 5.16e-107 | 314 |
| MS.gene069154.t1 | AT4G34230 | 51.977 | 354 | 169 | 1 | 7 | 359 | 4 | 357 | 1.57e-104 | 311 |
| MS.gene069154.t1 | AT4G34230 | 51.695 | 354 | 170 | 1 | 7 | 359 | 4 | 357 | 1.64e-103 | 309 |
| MS.gene069154.t1 | AT5G63620 | 26.207 | 290 | 186 | 6 | 15 | 278 | 58 | 345 | 1.98e-24 | 103 |
| MS.gene069154.t1 | AT5G63620 | 26.207 | 290 | 186 | 6 | 15 | 278 | 58 | 345 | 2.36e-24 | 103 |
| MS.gene069154.t1 | AT5G63620 | 27.092 | 251 | 160 | 5 | 15 | 244 | 58 | 306 | 3.19e-23 | 99.0 |
| MS.gene069154.t1 | AT5G43940 | 25.434 | 346 | 221 | 11 | 39 | 352 | 36 | 376 | 1.03e-18 | 87.0 |
| MS.gene069154.t1 | AT5G43940 | 25.434 | 346 | 221 | 11 | 39 | 352 | 48 | 388 | 1.14e-18 | 87.0 |
| MS.gene069154.t1 | AT1G64710 | 26.452 | 310 | 193 | 11 | 39 | 318 | 13 | 317 | 4.07e-15 | 76.3 |
| MS.gene069154.t1 | AT1G64710 | 26.452 | 310 | 193 | 11 | 39 | 318 | 36 | 340 | 4.12e-15 | 76.3 |
| MS.gene069154.t1 | AT1G77120 | 23.343 | 347 | 231 | 11 | 39 | 354 | 36 | 378 | 5.82e-14 | 72.8 |
| MS.gene069154.t1 | AT4G22110 | 24.779 | 339 | 216 | 15 | 39 | 342 | 43 | 377 | 5.14e-12 | 67.0 |
| MS.gene069154.t1 | AT4G22110 | 24.779 | 339 | 216 | 15 | 39 | 342 | 43 | 377 | 5.14e-12 | 67.0 |
| MS.gene069154.t1 | AT5G24760 | 24.868 | 378 | 232 | 18 | 4 | 348 | 10 | 368 | 2.73e-11 | 64.7 |
Find 105 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTAAAGGCATGAAGTTTC+TGG | 0.208621 | 5.3:-20238703 | MS.gene069154:intron |
| GTGGTTGGTCTTGGTGGATT+AGG | 0.231502 | 5.3:-20238343 | MS.gene069154:CDS |
| AAGGAAGCCATTGAACATTT+AGG | 0.264479 | 5.3:-20238247 | MS.gene069154:CDS |
| GTGAAATTTGCTAAAGCTTT+TGG | 0.271062 | 5.3:-20238310 | MS.gene069154:CDS |
| GATTGTTCCATCAATATTCT+TGG | 0.284213 | 5.3:+20238531 | None:intergenic |
| CCATCCACTAATGCCTTTGA+TGG | 0.326232 | 5.3:-20237866 | MS.gene069154:CDS |
| TATTGGTATGCACCTGCATT+TGG | 0.326748 | 5.3:+20238191 | None:intergenic |
| CATGTGGGTGTGGTTGGTCT+TGG | 0.332518 | 5.3:-20238352 | MS.gene069154:CDS |
| ATTGGAATAACCTCAATATC+AGG | 0.341163 | 5.3:+20237236 | None:intergenic |
| TCTATTTACCCTTTAGTTCC+CGG | 0.349623 | 5.3:-20238817 | MS.gene069154:CDS |
| TGGAGCTCCTGAGAAGCCTT+TGG | 0.354574 | 5.3:-20237809 | MS.gene069154:CDS |
| ATCAGGTTTCACATCATGTT+TGG | 0.355721 | 5.3:+20237253 | None:intergenic |
| GCAGTATTCACATAATCTAT+TGG | 0.360498 | 5.3:+20237218 | None:intergenic |
| GGAAGCTCCAAAGGCTTCTC+AGG | 0.372255 | 5.3:+20237802 | None:intergenic |
| GCTGTAATGGGCACCTTTGA+TGG | 0.374524 | 5.3:-20237913 | MS.gene069154:CDS |
| GAGTATGATTGGAGGGATAA+AGG | 0.378275 | 5.3:-20237303 | MS.gene069154:CDS |
| GTGGGTGTGGTTGGTCTTGG+TGG | 0.387486 | 5.3:-20238349 | MS.gene069154:CDS |
| CTCCATTCAAATTCTCTAGA+AGG | 0.399838 | 5.3:-20242475 | MS.gene069154:intron |
| TTGTTAGGATGCTCCATCTC+TGG | 0.400461 | 5.3:+20242539 | None:intergenic |
| CTTGCAGGGAGAAAGATAAT+TGG | 0.408178 | 5.3:-20237329 | MS.gene069154:intron |
| GCTGCTCCTCTTCTTTGCGC+GGG | 0.412194 | 5.3:-20238427 | MS.gene069154:CDS |
| ATATTGTGGTATTTGTCATT+CGG | 0.413182 | 5.3:-20238872 | MS.gene069154:CDS |
| GAATCATGGTAAACTTGTTA+TGG | 0.415423 | 5.3:-20237833 | MS.gene069154:CDS |
| AAACCCATCAAAGGCATTAG+TGG | 0.416505 | 5.3:+20237862 | None:intergenic |
| TCTTGGTGGATTAGGTCATA+TGG | 0.422443 | 5.3:-20238335 | MS.gene069154:CDS |
| GTAGGTGTGGGGTGCATGGT+TGG | 0.423962 | 5.3:-20238628 | MS.gene069154:CDS |
| CATTATGCCATAGGCTGTAA+TGG | 0.424898 | 5.3:-20237926 | MS.gene069154:intron |
| ATAATTGGCGGGAGTATGAT+TGG | 0.428362 | 5.3:-20237314 | MS.gene069154:CDS |
| TAAGTTCAAAATATTTCAAC+GGG | 0.433885 | 5.3:+20238389 | None:intergenic |
| ATGGGTTTATTGAAGAATCA+TGG | 0.434534 | 5.3:-20237847 | MS.gene069154:CDS |
| TATCGATTTGTTATTGACAT+TGG | 0.438397 | 5.3:-20237164 | MS.gene069154:CDS |
| GAGCATCCTAACAAGGCTTT+CGG | 0.442282 | 5.3:-20242530 | MS.gene069154:CDS |
| TACCTTCTAGAGAATTTGAA+TGG | 0.452320 | 5.3:+20242473 | None:intergenic |
| TATGGCGCCAAGAATATTGA+TGG | 0.464291 | 5.3:-20238538 | MS.gene069154:CDS |
| ATTGATGGAACAATCACATA+TGG | 0.464788 | 5.3:-20238523 | MS.gene069154:CDS |
| GCCCATCCGAAAGCCTTGTT+AGG | 0.466479 | 5.3:+20242524 | None:intergenic |
| TCAAAGATGATTCTCACATA+TGG | 0.467079 | 5.3:-20238556 | MS.gene069154:CDS |
| CGCTGCTCCTCTTCTTTGCG+CGG | 0.469861 | 5.3:-20238428 | MS.gene069154:CDS |
| GCATCAAGTGGTAAGGCATC+AGG | 0.469970 | 5.3:+20238451 | None:intergenic |
| TTTAGGAGCTGACTCATTTG+TGG | 0.470966 | 5.3:-20238230 | MS.gene069154:CDS |
| ATTATGCCATAGGCTGTAAT+GGG | 0.471460 | 5.3:-20237925 | MS.gene069154:intron |
| CATGGTAAACTTGTTATGGT+TGG | 0.472368 | 5.3:-20237829 | MS.gene069154:CDS |
| CCTGCATTTGGTCTTGTTCG+TGG | 0.476494 | 5.3:+20238203 | None:intergenic |
| TAAGAGTACCCGGGAACTAA+AGG | 0.478153 | 5.3:+20238808 | None:intergenic |
| GGTTTACATGTGGGTGTGGT+TGG | 0.481554 | 5.3:-20238358 | MS.gene069154:CDS |
| GGCTTTCGGATGGGCAGCTA+GGG | 0.482228 | 5.3:-20242516 | MS.gene069154:CDS |
| TAGAGAATTTGAATGGAGAC+AGG | 0.487837 | 5.3:+20242480 | None:intergenic |
| AGGCTTTCGGATGGGCAGCT+AGG | 0.494247 | 5.3:-20242517 | MS.gene069154:CDS |
| AAGAGTACCCGGGAACTAAA+GGG | 0.498094 | 5.3:+20238809 | None:intergenic |
| GAAGTGTTCGTCGGCAACCA+TGG | 0.500610 | 5.3:+20238486 | None:intergenic |
| GTGGTAAGGCATCAGGAATA+CGG | 0.505776 | 5.3:+20238458 | None:intergenic |
| CAAGGTAGGTGTGGGGTGCA+TGG | 0.511746 | 5.3:-20238632 | MS.gene069154:CDS |
| CATCCACTAATGCCTTTGAT+GGG | 0.513597 | 5.3:-20237865 | MS.gene069154:CDS |
| TTAAGTTCAAAATATTTCAA+CGG | 0.517104 | 5.3:+20238388 | None:intergenic |
| TGGGCAGCTAGGGACTCATC+TGG | 0.518107 | 5.3:-20242506 | MS.gene069154:CDS |
| CTATTTACCCTTTAGTTCCC+GGG | 0.522477 | 5.3:-20238816 | MS.gene069154:intron |
| GCCTGGTTTACATGTGGGTG+TGG | 0.525422 | 5.3:-20238362 | MS.gene069154:CDS |
| TCCTAACAAGGCTTTCGGAT+GGG | 0.532763 | 5.3:-20242525 | MS.gene069154:CDS |
| AGATTATGTGAATACTGCTA+TGG | 0.534220 | 5.3:-20237213 | MS.gene069154:CDS |
| CTGCTCCTCTTCTTTGCGCG+GGG | 0.534864 | 5.3:-20238426 | MS.gene069154:CDS |
| GTCAGCTCCTAAATGTTCAA+TGG | 0.541539 | 5.3:+20238240 | None:intergenic |
| AGTGTCAATAATACCATCAA+AGG | 0.544745 | 5.3:+20237900 | None:intergenic |
| ATTTCACATCAGCTTTGAGT+AGG | 0.545168 | 5.3:+20237186 | None:intergenic |
| CCTCCAATTAAAGAAAATGC+GGG | 0.545652 | 5.3:+20237781 | None:intergenic |
| GTTGGAGACAAGGTAGGTGT+GGG | 0.551318 | 5.3:-20238640 | MS.gene069154:CDS |
| GTGATCCCCGCGCAAAGAAG+AGG | 0.555802 | 5.3:+20238421 | None:intergenic |
| AAGGTGACAAAGTTCAAAGT+TGG | 0.563516 | 5.3:-20238658 | MS.gene069154:CDS |
| ACAACTTTGACATGAGTGGC+AGG | 0.565146 | 5.3:+20238603 | None:intergenic |
| AGCAGCGGCATCAAGTGGTA+AGG | 0.566534 | 5.3:+20238444 | None:intergenic |
| AGTTGGAGACAAGGTAGGTG+TGG | 0.572309 | 5.3:-20238641 | MS.gene069154:CDS |
| GAAAATGCGGGAAGCTCCAA+AGG | 0.573890 | 5.3:+20237793 | None:intergenic |
| ACCTCCAATTAAAGAAAATG+CGG | 0.577029 | 5.3:+20237780 | None:intergenic |
| AACAAGCCTGGTTTACATGT+GGG | 0.577892 | 5.3:-20238367 | MS.gene069154:CDS |
| GCAGGGAGAAAGATAATTGG+CGG | 0.580057 | 5.3:-20237326 | MS.gene069154:intron |
| AATGGCTTTACAACCAGAGA+TGG | 0.581578 | 5.3:-20242552 | MS.gene069154:CDS |
| CCATCAAAGGCATTAGTGGA+TGG | 0.582622 | 5.3:+20237866 | None:intergenic |
| ATCCTAACAAGGCTTTCGGA+TGG | 0.582927 | 5.3:-20242526 | MS.gene069154:CDS |
| TGGAGGCTACTCTGATACCA+TGG | 0.587648 | 5.3:-20238503 | MS.gene069154:CDS |
| TAACAAGCCTGGTTTACATG+TGG | 0.588235 | 5.3:-20238368 | MS.gene069154:CDS |
| TCTGGTGAAGTGACAAAGGT+GGG | 0.588343 | 5.3:-20238685 | MS.gene069154:CDS |
| CGCGCAAAGAAGAGGAGCAG+CGG | 0.588367 | 5.3:+20238429 | None:intergenic |
| AGAGGAGCAGCGGCATCAAG+TGG | 0.598337 | 5.3:+20238439 | None:intergenic |
| CAGGGAGAAAGATAATTGGC+GGG | 0.600654 | 5.3:-20237325 | MS.gene069154:CDS |
| TTCTTCAATAAACCCATCAA+AGG | 0.601080 | 5.3:+20237853 | None:intergenic |
| GCATTCAAAGTACTATATTG+TGG | 0.602276 | 5.3:-20238886 | MS.gene069154:CDS |
| ATTGGCGGGAGTATGATTGG+AGG | 0.602841 | 5.3:-20237311 | MS.gene069154:CDS |
| CCCACTCGTTCTTCAGCATG+TGG | 0.605038 | 5.3:+20238845 | None:intergenic |
| AGTGACAAAGGTGGGAAGCA+AGG | 0.605499 | 5.3:-20238677 | MS.gene069154:CDS |
| TTGGCGGGAGTATGATTGGA+GGG | 0.608890 | 5.3:-20237310 | MS.gene069154:CDS |
| ACCACACCCACATGTAAACC+AGG | 0.610009 | 5.3:+20238361 | None:intergenic |
| TCCACATGCTGAAGAACGAG+TGG | 0.610054 | 5.3:-20238846 | MS.gene069154:CDS |
| CACCACAACTTTGACATGAG+TGG | 0.612104 | 5.3:+20238599 | None:intergenic |
| ACGGATCACGAAGTGTTCGT+CGG | 0.622341 | 5.3:+20238477 | None:intergenic |
| AGAGATGGAGCATCCTAACA+AGG | 0.623028 | 5.3:-20242537 | MS.gene069154:CDS |
| GATGGAACAATCACATATGG+AGG | 0.625685 | 5.3:-20238520 | MS.gene069154:CDS |
| TGATGTGAAACCTGATATTG+AGG | 0.629933 | 5.3:-20237246 | MS.gene069154:CDS |
| CCACATGCTGAAGAACGAGT+GGG | 0.636670 | 5.3:-20238845 | MS.gene069154:CDS |
| TTCTGGTGAAGTGACAAAGG+TGG | 0.640686 | 5.3:-20238686 | MS.gene069154:CDS |
| TGCCACTCATGTCAAAGTTG+TGG | 0.640763 | 5.3:-20238601 | MS.gene069154:CDS |
| TTCAAAGTTGGAGACAAGGT+AGG | 0.645124 | 5.3:-20238646 | MS.gene069154:CDS |
| AAAGTTCAAAGTTGGAGACA+AGG | 0.646715 | 5.3:-20238650 | MS.gene069154:CDS |
| CCACGAACAAGACCAAATGC+AGG | 0.648583 | 5.3:-20238203 | MS.gene069154:intron |
| CACATGCTGAAGAACGAGTG+GGG | 0.656172 | 5.3:-20238844 | MS.gene069154:CDS |
| AGTTTCTGGTGAAGTGACAA+AGG | 0.684713 | 5.3:-20238689 | MS.gene069154:CDS |
| TTGGAGACAAGGTAGGTGTG+GGG | 0.710430 | 5.3:-20238639 | MS.gene069154:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCATTTAATTACAAAAT+TGG | - | chr5.3:20237584-20237603 | MS.gene069154:intron | 10.0% |
| !! | TAATTAATTATGTTAAGAAA+TGG | - | chr5.3:20240335-20240354 | MS.gene069154:intron | 10.0% |
| !! | TGTTTAAATAAAATATATAG+GGG | + | chr5.3:20237404-20237423 | None:intergenic | 10.0% |
| !! | TTAAACATATAAAAAAATCT+CGG | + | chr5.3:20240437-20240456 | None:intergenic | 10.0% |
| !!! | AAAAAGTTGATATATTTATA+AGG | - | chr5.3:20237847-20237866 | MS.gene069154:CDS | 10.0% |
| !!! | ATTATGTATTTTTATAGTAT+AGG | + | chr5.3:20240744-20240763 | None:intergenic | 10.0% |
| !!! | CATTTTTAATAAAAATATCA+AGG | + | chr5.3:20237679-20237698 | None:intergenic | 10.0% |
| !!! | GTTTTGTATATTATTAATAA+GGG | + | chr5.3:20238316-20238335 | None:intergenic | 10.0% |
| !!! | TGTTTTGTATATTATTAATA+AGG | + | chr5.3:20238317-20238336 | None:intergenic | 10.0% |
| !!! | TTTATGTTTTTATTTTCATA+CGG | + | chr5.3:20242179-20242198 | None:intergenic | 10.0% |
| !!! | TTTTATATGTTTAAATCTAT+AGG | - | chr5.3:20240443-20240462 | MS.gene069154:intron | 10.0% |
| !! | AAAAAAGATATTGTAACAAA+TGG | - | chr5.3:20241647-20241666 | MS.gene069154:intron | 15.0% |
| !! | AAAATTATTGGCATATATAT+TGG | - | chr5.3:20238347-20238366 | MS.gene069154:CDS | 15.0% |
| !! | AAATTATTGGCATATATATT+GGG | - | chr5.3:20238348-20238367 | MS.gene069154:CDS | 15.0% |
| !! | ATATAAATAGAGTTTATTGA+TGG | - | chr5.3:20238097-20238116 | MS.gene069154:intron | 15.0% |
| !! | CAAAAATCATTTCATTTATT+TGG | - | chr5.3:20240627-20240646 | MS.gene069154:intron | 15.0% |
| !! | CATAATTGACATAAAATTAT+TGG | - | chr5.3:20238335-20238354 | MS.gene069154:CDS | 15.0% |
| !! | CATATAAATATTAGATATGA+AGG | + | chr5.3:20242120-20242139 | None:intergenic | 15.0% |
| !! | CTTAATTTCATATAATAGTT+TGG | - | chr5.3:20242033-20242052 | MS.gene069154:intron | 15.0% |
| !! | CTTCTTAAAAACTTAAATTA+TGG | + | chr5.3:20238022-20238041 | None:intergenic | 15.0% |
| !! | TAAAAGATAAAACTAAAGAT+CGG | - | chr5.3:20238061-20238080 | MS.gene069154:intron | 15.0% |
| !! | TAGTAACTAAATAAAAACTA+AGG | + | chr5.3:20239975-20239994 | None:intergenic | 15.0% |
| !! | TATATAAAAATTTACCCAAA+TGG | + | chr5.3:20237505-20237524 | None:intergenic | 15.0% |
| !! | TTAAGTTCAAAATATTTCAA+CGG | + | chr5.3:20241305-20241324 | None:intergenic | 15.0% |
| !!! | AACAAAACATTTTTTTTTGA+AGG | - | chr5.3:20240662-20240681 | MS.gene069154:intron | 15.0% |
| !!! | AAGTTTTCATTTGTTTTTTA+TGG | + | chr5.3:20241587-20241606 | None:intergenic | 15.0% |
| !!! | ACTTTCTGAAAATATATTTT+AGG | + | chr5.3:20242323-20242342 | None:intergenic | 15.0% |
| !!! | CATAATTTAAGTTTTTAAGA+AGG | - | chr5.3:20238020-20238039 | MS.gene069154:intron | 15.0% |
| !!! | TTTACCTATGTTTTAATATA+GGG | + | chr5.3:20241992-20242011 | None:intergenic | 15.0% |
| !!! | TTTTACCTATGTTTTAATAT+AGG | + | chr5.3:20241993-20242012 | None:intergenic | 15.0% |
| !! | AAAAATGTGAAATAGTACAT+AGG | + | chr5.3:20240179-20240198 | None:intergenic | 20.0% |
| !! | AAAGTCGAAAAAATATTTAG+AGG | - | chr5.3:20237815-20237834 | MS.gene069154:CDS | 20.0% |
| !! | AAGTCGAAAAAATATTTAGA+GGG | - | chr5.3:20237816-20237835 | MS.gene069154:CDS | 20.0% |
| !! | ATATGAAAAACAGAAACAAA+TGG | + | chr5.3:20237263-20237282 | None:intergenic | 20.0% |
| !! | ATATGGGTGTAATAAAAATA+TGG | - | chr5.3:20238243-20238262 | MS.gene069154:CDS | 20.0% |
| !! | ATATTAAACACGTAATTGAA+CGG | - | chr5.3:20240570-20240589 | MS.gene069154:intron | 20.0% |
| !! | ATTACCTGAAATTAAGTTAA+AGG | - | chr5.3:20242279-20242298 | MS.gene069154:intron | 20.0% |
| !! | ATTGTATTTCAAACTCAAAT+TGG | - | chr5.3:20240022-20240041 | MS.gene069154:intron | 20.0% |
| !! | CTAAAAAGACAAAATTGAAA+TGG | + | chr5.3:20242074-20242093 | None:intergenic | 20.0% |
| !! | GATGTAGTAAATTCTAAATA+TGG | + | chr5.3:20238158-20238177 | None:intergenic | 20.0% |
| !! | TAAGTTCAAAATATTTCAAC+GGG | + | chr5.3:20241304-20241323 | None:intergenic | 20.0% |
| !! | TACAAAACAATGTCATATAT+AGG | - | chr5.3:20241940-20241959 | MS.gene069154:intron | 20.0% |
| !! | TACAATTGCAAAATTGATAT+AGG | - | chr5.3:20238200-20238219 | MS.gene069154:intron | 20.0% |
| !! | TATACCCTATATTAAAACAT+AGG | - | chr5.3:20241985-20242004 | MS.gene069154:intron | 20.0% |
| !! | TATATAGGTATGTCATATAT+AGG | - | chr5.3:20241955-20241974 | MS.gene069154:intron | 20.0% |
| !! | TATGGGTGTAATAAAAATAT+GGG | - | chr5.3:20238244-20238263 | MS.gene069154:CDS | 20.0% |
| !! | TGTAAAAGTTGTTTAGATTT+AGG | - | chr5.3:20240600-20240619 | MS.gene069154:intron | 20.0% |
| !! | TGTAAAATCATATTTCACAA+AGG | - | chr5.3:20237549-20237568 | MS.gene069154:intron | 20.0% |
| !! | TTGAAATGGAAAAAAGATAA+AGG | + | chr5.3:20242060-20242079 | None:intergenic | 20.0% |
| !!! | AATTTTAAAATTTGATGCGA+TGG | + | chr5.3:20237462-20237481 | None:intergenic | 20.0% |
| !!! | ATCTAAATTTTTTTTACGGA+TGG | - | chr5.3:20237608-20237627 | MS.gene069154:intron | 20.0% |
| !!! | ATGATATTTTCATATGTCTA+AGG | - | chr5.3:20237696-20237715 | MS.gene069154:intron | 20.0% |
| !!! | GTTTGTTTGTTTATTTTTCT+TGG | - | chr5.3:20237768-20237787 | MS.gene069154:intron | 20.0% |
| !!! | TCTTTTATACAATTGTTTCT+TGG | - | chr5.3:20238542-20238561 | MS.gene069154:CDS | 20.0% |
| !!! | TGGCATCTAAATTTTTTTTA+CGG | - | chr5.3:20237604-20237623 | MS.gene069154:intron | 20.0% |
| !!! | TTAAAGTTGATATAGACTTA+TGG | - | chr5.3:20238276-20238295 | MS.gene069154:CDS | 20.0% |
| !!! | TTTTTTTAGATAAGCTGTTT+TGG | - | chr5.3:20239755-20239774 | MS.gene069154:intron | 20.0% |
| ! | AAAAATTTACCCAAATGGTA+TGG | + | chr5.3:20237500-20237519 | None:intergenic | 25.0% |
| ! | AAAATTTGTGTTGAGTTAAG+TGG | + | chr5.3:20237530-20237549 | None:intergenic | 25.0% |
| ! | AAATTTGTGTTGAGTTAAGT+GGG | + | chr5.3:20237529-20237548 | None:intergenic | 25.0% |
| ! | AAGATAGTGAAATAGTACAT+AGG | + | chr5.3:20238526-20238545 | None:intergenic | 25.0% |
| ! | AATAAACTAGAGTTACTTAG+TGG | - | chr5.3:20240092-20240111 | MS.gene069154:intron | 25.0% |
| ! | AATCTAGTAGAAAGTTAGTT+AGG | - | chr5.3:20238464-20238483 | MS.gene069154:CDS | 25.0% |
| ! | ACAATAAAAGCTTATCAACA+AGG | - | chr5.3:20237301-20237320 | MS.gene069154:CDS | 25.0% |
| ! | ACTATAGTAGAAAGTTAGTT+AGG | - | chr5.3:20240117-20240136 | MS.gene069154:intron | 25.0% |
| ! | ATAAACAAACAAACAAGATG+TGG | + | chr5.3:20237762-20237781 | None:intergenic | 25.0% |
| ! | ATATTGTGGTATTTGTCATT+CGG | - | chr5.3:20240818-20240837 | MS.gene069154:intron | 25.0% |
| ! | ATCTAGTAGAAAGTTAGTTA+GGG | - | chr5.3:20238465-20238484 | MS.gene069154:CDS | 25.0% |
| ! | CTATAGTAGAAAGTTAGTTA+GGG | - | chr5.3:20240118-20240137 | MS.gene069154:intron | 25.0% |
| ! | CTTGAAAATATATACGCAAA+TGG | - | chr5.3:20242206-20242225 | MS.gene069154:intron | 25.0% |
| ! | GCAGCTTATTTATAATGATT+TGG | + | chr5.3:20240155-20240174 | None:intergenic | 25.0% |
| ! | GTATCAAGTTCAAATTGATT+TGG | + | chr5.3:20237926-20237945 | None:intergenic | 25.0% |
| ! | TAAACAAACAAACAAGATGT+GGG | + | chr5.3:20237761-20237780 | None:intergenic | 25.0% |
| ! | TAAATAGAGTTTATTGATGG+TGG | - | chr5.3:20238100-20238119 | MS.gene069154:intron | 25.0% |
| ! | TAAATTATCCCATTGTTGAT+TGG | - | chr5.3:20237986-20238005 | MS.gene069154:intron | 25.0% |
| ! | TAGATTATGTAATTCTCTCT+AGG | + | chr5.3:20240227-20240246 | None:intergenic | 25.0% |
| ! | TTCTAATTCAATCTATGTGT+TGG | - | chr5.3:20240476-20240495 | MS.gene069154:intron | 25.0% |
| !! | ATTGTTTGAATTCGTTGATT+TGG | + | chr5.3:20238988-20239007 | None:intergenic | 25.0% |
| !! | CATTTCAATTTTGTCCTTTT+TGG | + | chr5.3:20242232-20242251 | None:intergenic | 25.0% |
| !! | CATTTTGTTCTTCAATTTCA+AGG | - | chr5.3:20239407-20239426 | MS.gene069154:intron | 25.0% |
| !! | TAGTCCTTTAACTTAATTTC+AGG | + | chr5.3:20242286-20242305 | None:intergenic | 25.0% |
| !! | TATCTAAAAAAACGCGTTTT+TGG | + | chr5.3:20239747-20239766 | None:intergenic | 25.0% |
| !!! | TATCGATTTGTTATTGACAT+TGG | - | chr5.3:20242526-20242545 | MS.gene069154:CDS | 25.0% |
| AAAACAATAGAAGCTCAAGA+TGG | + | chr5.3:20239924-20239943 | None:intergenic | 30.0% | |
| AAACAAACAAACAAGATGTG+GGG | + | chr5.3:20237760-20237779 | None:intergenic | 30.0% | |
| AAATCTTCAAAATGCTTGCA+GGG | - | chr5.3:20242347-20242366 | MS.gene069154:intron | 30.0% | |
| AAATTAACTCAAACACCATG+AGG | + | chr5.3:20237373-20237392 | None:intergenic | 30.0% | |
| AATTTCGATCCATACCATTT+GGG | - | chr5.3:20237488-20237507 | MS.gene069154:intron | 30.0% | |
| AATTTGTGTTGAGTTAAGTG+GGG | + | chr5.3:20237528-20237547 | None:intergenic | 30.0% | |
| ACCTCCAATTAAAGAAAATG+CGG | + | chr5.3:20241913-20241932 | None:intergenic | 30.0% | |
| AGATTATGTGAATACTGCTA+TGG | - | chr5.3:20242477-20242496 | MS.gene069154:CDS | 30.0% | |
| AGTATAGTGAGAAGATAACT+TGG | - | chr5.3:20238432-20238451 | MS.gene069154:CDS | 30.0% | |
| AGTGTCAATAATACCATCAA+AGG | + | chr5.3:20241793-20241812 | None:intergenic | 30.0% | |
| AGTTATTAAAAGCGAGCTAT+TGG | + | chr5.3:20241519-20241538 | None:intergenic | 30.0% | |
| ATGGGTTTATTGAAGAATCA+TGG | - | chr5.3:20241843-20241862 | MS.gene069154:intron | 30.0% | |
| ATTGATGGAACAATCACATA+TGG | - | chr5.3:20241167-20241186 | MS.gene069154:intron | 30.0% | |
| ATTGGAATAACCTCAATATC+AGG | + | chr5.3:20242457-20242476 | None:intergenic | 30.0% | |
| GATTGTTCCATCAATATTCT+TGG | + | chr5.3:20241162-20241181 | None:intergenic | 30.0% | |
| GCAGTATTCACATAATCTAT+TGG | + | chr5.3:20242475-20242494 | None:intergenic | 30.0% | |
| GCCTTTACATAATAGAGAAA+GGG | + | chr5.3:20240977-20240996 | None:intergenic | 30.0% | |
| GTAGCTTATTTATAGTGACT+TGG | + | chr5.3:20238502-20238521 | None:intergenic | 30.0% | |
| TAAATCTTCAAAATGCTTGC+AGG | - | chr5.3:20242346-20242365 | MS.gene069154:intron | 30.0% | |
| TAATTTCGATCCATACCATT+TGG | - | chr5.3:20237487-20237506 | MS.gene069154:intron | 30.0% | |
| TAGATTGTGTAATTCTCTCT+AGG | + | chr5.3:20238576-20238595 | None:intergenic | 30.0% | |
| TCAAAGATGATTCTCACATA+TGG | - | chr5.3:20241134-20241153 | MS.gene069154:intron | 30.0% | |
| TCCCTTTCTCTATTATGTAA+AGG | - | chr5.3:20240973-20240992 | MS.gene069154:intron | 30.0% | |
| TCTATAGTGTTATGAATCAG+AGG | + | chr5.3:20240284-20240303 | None:intergenic | 30.0% | |
| TGCCTTTACATAATAGAGAA+AGG | + | chr5.3:20240978-20240997 | None:intergenic | 30.0% | |
| TTCTTCAATAAACCCATCAA+AGG | + | chr5.3:20241840-20241859 | None:intergenic | 30.0% | |
| ! | AAATTTCCACTTTGAGTTTG+AGG | - | chr5.3:20240047-20240066 | MS.gene069154:intron | 30.0% |
| ! | AATTTCCACTTTGAGTTTGA+GGG | - | chr5.3:20240048-20240067 | MS.gene069154:intron | 30.0% |
| ! | CTGACTAGTTCATACAATAT+TGG | + | chr5.3:20237891-20237910 | None:intergenic | 30.0% |
| ! | GCATTCAAAGTACTATATTG+TGG | - | chr5.3:20240804-20240823 | MS.gene069154:intron | 30.0% |
| ! | TACCTTCTAGAGAATTTGAA+TGG | + | chr5.3:20237220-20237239 | None:intergenic | 30.0% |
| ! | TTTAAAATTTGATGCGATGG+AGG | + | chr5.3:20237459-20237478 | None:intergenic | 30.0% |
| !! | GAATCATGGTAAACTTGTTA+TGG | - | chr5.3:20241857-20241876 | MS.gene069154:intron | 30.0% |
| !! | GATTTTGGAAAAGCTAGTTT+AGG | - | chr5.3:20239669-20239688 | MS.gene069154:intron | 30.0% |
| !! | GGGAAAAGATTATTTTGTGA+TGG | + | chr5.3:20240957-20240976 | None:intergenic | 30.0% |
| !! | TATTTTGAACTTAACAAGCC+TGG | - | chr5.3:20241311-20241330 | MS.gene069154:intron | 30.0% |
| !! | TCGCAAATTTCAGTTGTTTT+CGG | - | chr5.3:20238768-20238787 | MS.gene069154:intron | 30.0% |
| !! | TTTATGATGTTAAGAGTACC+CGG | + | chr5.3:20240895-20240914 | None:intergenic | 30.0% |
| !!! | AATGTTGTTGTTGCTTTTCA+GGG | - | chr5.3:20240761-20240780 | MS.gene069154:intron | 30.0% |
| !!! | GTGAAATTTGCTAAAGCTTT+TGG | - | chr5.3:20241380-20241399 | MS.gene069154:intron | 30.0% |
| !!! | TAATGTTGTTGTTGCTTTTC+AGG | - | chr5.3:20240760-20240779 | MS.gene069154:intron | 30.0% |
| AAAGCGATTTCGCTTCAAAT+TGG | - | chr5.3:20239449-20239468 | MS.gene069154:intron | 35.0% | |
| AAAGTTCAAAGTTGGAGACA+AGG | - | chr5.3:20241040-20241059 | MS.gene069154:intron | 35.0% | |
| AACAACTGAAATTTGCGAAG+CGG | + | chr5.3:20238766-20238785 | None:intergenic | 35.0% | |
| AACGTTGTTCATTATGCCAT+AGG | - | chr5.3:20241755-20241774 | MS.gene069154:intron | 35.0% | |
| AAGGAAGCCATTGAACATTT+AGG | - | chr5.3:20241443-20241462 | MS.gene069154:intron | 35.0% | |
| AAGGTGACAAAGTTCAAAGT+TGG | - | chr5.3:20241032-20241051 | MS.gene069154:intron | 35.0% | |
| ACAAACGGAAACGAATTTGT+CGG | + | chr5.3:20239259-20239278 | None:intergenic | 35.0% | |
| ACAAATTCGTTTCCGTTTGT+GGG | - | chr5.3:20239259-20239278 | MS.gene069154:intron | 35.0% | |
| AGAACAAAATGATGCAGTTC+TGG | + | chr5.3:20239398-20239417 | None:intergenic | 35.0% | |
| AGTTACAAGCCAATCAACAA+TGG | + | chr5.3:20237998-20238017 | None:intergenic | 35.0% | |
| ATAAAACTAAAGATCGGACG+AGG | - | chr5.3:20238067-20238086 | MS.gene069154:intron | 35.0% | |
| ATATACGCAAATGGCCAAAA+AGG | - | chr5.3:20242215-20242234 | MS.gene069154:intron | 35.0% | |
| ATCAACTCCGAATCAAGAAT+CGG | + | chr5.3:20238957-20238976 | None:intergenic | 35.0% | |
| ATCAGGTTTCACATCATGTT+TGG | + | chr5.3:20242440-20242459 | None:intergenic | 35.0% | |
| ATCTTCTTCTTCATCACCAT+TGG | + | chr5.3:20238709-20238728 | None:intergenic | 35.0% | |
| ATGCTTCGAATTCTTGATTG+CGG | + | chr5.3:20239039-20239058 | None:intergenic | 35.0% | |
| ATTATGCCATAGGCTGTAAT+GGG | - | chr5.3:20241765-20241784 | MS.gene069154:intron | 35.0% | |
| CCATGAATTTGAAGATTGAG+AGG | - | chr5.3:20242153-20242172 | MS.gene069154:intron | 35.0% | |
| CCTCCAATTAAAGAAAATGC+GGG | + | chr5.3:20241912-20241931 | None:intergenic | 35.0% | |
| CCTCTCAATCTTCAAATTCA+TGG | + | chr5.3:20242156-20242175 | None:intergenic | 35.0% | |
| CTCCATTCAAATTCTCTAGA+AGG | - | chr5.3:20237215-20237234 | MS.gene069154:CDS | 35.0% | |
| GAATCCTCTGATTCATAACA+TGG | - | chr5.3:20238626-20238645 | MS.gene069154:CDS | 35.0% | |
| GATACCATGTTATGAATCAG+AGG | + | chr5.3:20238633-20238652 | None:intergenic | 35.0% | |
| GATGAAGAAGAAGATTCCAA+TGG | - | chr5.3:20238690-20238709 | MS.gene069154:CDS | 35.0% | |
| GTTACAAGCCAATCAACAAT+GGG | + | chr5.3:20237997-20238016 | None:intergenic | 35.0% | |
| TAACTGTGTGAATCAAACGA+AGG | + | chr5.3:20239317-20239336 | None:intergenic | 35.0% | |
| TAGAGAATTTGAATGGAGAC+AGG | + | chr5.3:20237213-20237232 | None:intergenic | 35.0% | |
| TCTTCTTCTTCATCAGAAAC+TGG | + | chr5.3:20238684-20238703 | None:intergenic | 35.0% | |
| TGATGTGAAACCTGATATTG+AGG | - | chr5.3:20242444-20242463 | MS.gene069154:intron | 35.0% | |
| TGGTGAATGAATACATGTGT+AGG | + | chr5.3:20237243-20237262 | None:intergenic | 35.0% | |
| TGTGAATCAACGAGAAAACA+AGG | + | chr5.3:20238882-20238901 | None:intergenic | 35.0% | |
| TTATGAATCAGAGGATTCCA+TGG | + | chr5.3:20238624-20238643 | None:intergenic | 35.0% | |
| ! | ACACTGATACTTTTACCTCA+TGG | - | chr5.3:20237355-20237374 | MS.gene069154:intron | 35.0% |
| ! | ATGTAAAGGCATGAAGTTTC+TGG | - | chr5.3:20240987-20241006 | MS.gene069154:intron | 35.0% |
| ! | ATTTCCACTTTGAGTTTGAG+GGG | - | chr5.3:20240049-20240068 | MS.gene069154:intron | 35.0% |
| ! | CTACTGGAATTGCATTTTCA+AGG | - | chr5.3:20239824-20239843 | MS.gene069154:intron | 35.0% |
| ! | CTTCCCGCATTTTCTTTAAT+TGG | - | chr5.3:20241906-20241925 | MS.gene069154:intron | 35.0% |
| ! | GATACTGTTTTCTCATGCTA+TGG | - | chr5.3:20239068-20239087 | MS.gene069154:intron | 35.0% |
| ! | GGAATTTGCTCCATTAACAT+GGG | - | chr5.3:20237637-20237656 | MS.gene069154:intron | 35.0% |
| ! | GTACTTTTGTCCCATGTTAA+TGG | + | chr5.3:20237650-20237669 | None:intergenic | 35.0% |
| ! | TAAACATGACTCTGAGAACA+AGG | + | chr5.3:20239595-20239614 | None:intergenic | 35.0% |
| ! | TCTATTTACCCTTTAGTTCC+CGG | - | chr5.3:20240873-20240892 | MS.gene069154:intron | 35.0% |
| ! | TGGAATTTGCTCCATTAACA+TGG | - | chr5.3:20237636-20237655 | MS.gene069154:intron | 35.0% |
| !! | AATCAAGAATCGGTGTTTTC+TGG | + | chr5.3:20238947-20238966 | None:intergenic | 35.0% |
| !! | ATTTCACATCAGCTTTGAGT+AGG | + | chr5.3:20242507-20242526 | None:intergenic | 35.0% |
| !! | CATGGTAAACTTGTTATGGT+TGG | - | chr5.3:20241861-20241880 | MS.gene069154:intron | 35.0% |
| !! | GAAAACACCGATTCTTGATT+CGG | - | chr5.3:20238947-20238966 | MS.gene069154:intron | 35.0% |
| !! | GCATAAGGCATATGTTGTTT+TGG | - | chr5.3:20239705-20239724 | MS.gene069154:intron | 35.0% |
| !! | TTATGATGTTAAGAGTACCC+GGG | + | chr5.3:20240894-20240913 | None:intergenic | 35.0% |
| !!! | AAGCTGTTTTGGTTCAGATA+TGG | - | chr5.3:20239766-20239785 | MS.gene069154:intron | 35.0% |
| !!! | TTTCCCCATTTTGAGTTTGA+GGG | - | chr5.3:20238399-20238418 | MS.gene069154:CDS | 35.0% |
| !!! | TTTTCCCCATTTTGAGTTTG+AGG | - | chr5.3:20238398-20238417 | MS.gene069154:CDS | 35.0% |
| !!! | TTTTTTTACGGATGGCAAAC+TGG | - | chr5.3:20237616-20237635 | MS.gene069154:intron | 35.0% |
| AAAACCCAAGTCCCTCAAAT+TGG | - | chr5.3:20238372-20238391 | MS.gene069154:CDS | 40.0% | |
| AAATTCGTTTCCGTTTGTGG+GGG | - | chr5.3:20239261-20239280 | MS.gene069154:intron | 40.0% | |
| AACAAGCCTGGTTTACATGT+GGG | - | chr5.3:20241323-20241342 | MS.gene069154:intron | 40.0% | |
| AACGTGAATCTGATTGCTGA+CGG | + | chr5.3:20239150-20239169 | None:intergenic | 40.0% | |
| AATCACCAATTTGAGGGACT+TGG | + | chr5.3:20238380-20238399 | None:intergenic | 40.0% | |
| AGAACACAAGATTGCTGATG+CGG | + | chr5.3:20238742-20238761 | None:intergenic | 40.0% | |
| AGTTCTTTCCTCTATCCCAA+GGG | + | chr5.3:20239289-20239308 | None:intergenic | 40.0% | |
| ATCACCAATTTGAGGGACTT+GGG | + | chr5.3:20238379-20238398 | None:intergenic | 40.0% | |
| ATGGTGAATCCATCAGTTTC+TGG | + | chr5.3:20238843-20238862 | None:intergenic | 40.0% | |
| CAAATTCGTTTCCGTTTGTG+GGG | - | chr5.3:20239260-20239279 | MS.gene069154:intron | 40.0% | |
| CATCCACTAATGCCTTTGAT+GGG | - | chr5.3:20241825-20241844 | MS.gene069154:intron | 40.0% | |
| CATTATGCCATAGGCTGTAA+TGG | - | chr5.3:20241764-20241783 | MS.gene069154:intron | 40.0% | |
| CCATGCTTGATGAAGGTAAA+AGG | + | chr5.3:20237330-20237349 | None:intergenic | 40.0% | |
| CTAGGTCAAATGCAATGGAA+AGG | + | chr5.3:20238599-20238618 | None:intergenic | 40.0% | |
| CTGTCGTTCAACAACAATAG+TGG | + | chr5.3:20239541-20239560 | None:intergenic | 40.0% | |
| CTTGCAGGGAGAAAGATAAT+TGG | - | chr5.3:20242361-20242380 | MS.gene069154:intron | 40.0% | |
| GACAAATTCGTTTCCGTTTG+TGG | - | chr5.3:20239258-20239277 | MS.gene069154:intron | 40.0% | |
| GAGTATGATTGGAGGGATAA+AGG | - | chr5.3:20242387-20242406 | MS.gene069154:intron | 40.0% | |
| GATGGAACAATCACATATGG+AGG | - | chr5.3:20241170-20241189 | MS.gene069154:intron | 40.0% | |
| GGAAACAGGAGAAAAAGATG+TGG | - | chr5.3:20240782-20240801 | MS.gene069154:intron | 40.0% | |
| GGGGAAAATCACCAATTTGA+GGG | + | chr5.3:20238386-20238405 | None:intergenic | 40.0% | |
| GTCAGCTCCTAAATGTTCAA+TGG | + | chr5.3:20241453-20241472 | None:intergenic | 40.0% | |
| GTTGTTGAACGACAGTGATA+TGG | - | chr5.3:20239546-20239565 | MS.gene069154:intron | 40.0% | |
| TAACAAGCCTGGTTTACATG+TGG | - | chr5.3:20241322-20241341 | MS.gene069154:intron | 40.0% | |
| TATGGCGCCAAGAATATTGA+TGG | - | chr5.3:20241152-20241171 | MS.gene069154:intron | 40.0% | |
| TATTGGTATGCACCTGCATT+TGG | + | chr5.3:20241502-20241521 | None:intergenic | 40.0% | |
| TGAAGAAACGTGAGTGGAAA+CGG | + | chr5.3:20238808-20238827 | None:intergenic | 40.0% | |
| TGGGGAAAATCACCAATTTG+AGG | + | chr5.3:20238387-20238406 | None:intergenic | 40.0% | |
| TTCAAAGTTGGAGACAAGGT+AGG | - | chr5.3:20241044-20241063 | MS.gene069154:intron | 40.0% | |
| TTCTGTCTTCGTCGAAAAAC+AGG | - | chr5.3:20239106-20239125 | MS.gene069154:intron | 40.0% | |
| TTGCATTTGACCTAGAACCA+TGG | - | chr5.3:20238604-20238623 | MS.gene069154:CDS | 40.0% | |
| ! | ATAATTGGCGGGAGTATGAT+TGG | - | chr5.3:20242376-20242395 | MS.gene069154:intron | 40.0% |
| ! | CCCGCATTTTCTTTAATTGG+AGG | - | chr5.3:20241909-20241928 | MS.gene069154:intron | 40.0% |
| ! | CCTTTTACCTTCATCAAGCA+TGG | - | chr5.3:20237327-20237346 | MS.gene069154:intron | 40.0% |
| ! | CTATTTACCCTTTAGTTCCC+GGG | - | chr5.3:20240874-20240893 | MS.gene069154:intron | 40.0% |
| ! | GATGGATTCACCATCAAGAT+CGG | - | chr5.3:20238849-20238868 | MS.gene069154:CDS | 40.0% |
| ! | GGACAAACGTGTTTTGCATA+AGG | - | chr5.3:20239690-20239709 | MS.gene069154:intron | 40.0% |
| ! | TTTAGGAGCTGACTCATTTG+TGG | - | chr5.3:20241460-20241479 | MS.gene069154:intron | 40.0% |
| ! | TTTCCACTTTGAGTTTGAGG+GGG | - | chr5.3:20240050-20240069 | MS.gene069154:intron | 40.0% |
| ! | TTTTAGTCCCCAAACGATGT+GGG | + | chr5.3:20237798-20237817 | None:intergenic | 40.0% |
| !! | AAACCCATCAAAGGCATTAG+TGG | + | chr5.3:20241831-20241850 | None:intergenic | 40.0% |
| !! | AGTTTCTGGTGAAGTGACAA+AGG | - | chr5.3:20241001-20241020 | MS.gene069154:intron | 40.0% |
| !! | ATCACAGTTCTGAATGTGTC+TGG | - | chr5.3:20239494-20239513 | MS.gene069154:intron | 40.0% |
| !! | TCACAGTTCTGAATGTGTCT+GGG | - | chr5.3:20239495-20239514 | MS.gene069154:intron | 40.0% |
| !! | TCAGTTGTTTTCGGTAGCTT+TGG | - | chr5.3:20238777-20238796 | MS.gene069154:intron | 40.0% |
| !! | TCTTGGTGGATTAGGTCATA+TGG | - | chr5.3:20241355-20241374 | MS.gene069154:intron | 40.0% |
| !! | TGGTTCTAGGTCAAATGCAA+TGG | + | chr5.3:20238604-20238623 | None:intergenic | 40.0% |
| !!! | CAACTCTGTTTTTGACGCTT+CGG | - | chr5.3:20238914-20238933 | MS.gene069154:intron | 40.0% |
| !!! | TCAATCGTCGATTTTGATCC+CGG | - | chr5.3:20239188-20239207 | MS.gene069154:intron | 40.0% |
| !!! | TTCCCCATTTTGAGTTTGAG+GGG | - | chr5.3:20238400-20238419 | MS.gene069154:CDS | 40.0% |
| !!! | TTGTTGCTTTTCAGGGAAAC+AGG | - | chr5.3:20240768-20240787 | MS.gene069154:intron | 40.0% |
| AAACTAAAGATCGGACGAGG+AGG | - | chr5.3:20238070-20238089 | MS.gene069154:intron | 45.0% | |
| AACTAAAGATCGGACGAGGA+GGG | - | chr5.3:20238071-20238090 | MS.gene069154:intron | 45.0% | |
| ACAACTTTGACATGAGTGGC+AGG | + | chr5.3:20241090-20241109 | None:intergenic | 45.0% | |
| ACACAGACCAATTCTTCCAC+CGG | + | chr5.3:20239210-20239229 | None:intergenic | 45.0% | |
| AGCGCGTTTAAGAAAGCTAC+TGG | - | chr5.3:20239808-20239827 | MS.gene069154:intron | 45.0% | |
| AGTCCCCCTCAAACTCAAAA+TGG | + | chr5.3:20238407-20238426 | None:intergenic | 45.0% | |
| ATCCTAACAAGGCTTTCGGA+TGG | - | chr5.3:20237164-20237183 | MS.gene069154:CDS | 45.0% | |
| CACCACAACTTTGACATGAG+TGG | + | chr5.3:20241094-20241113 | None:intergenic | 45.0% | |
| CAGGGAGAAAGATAATTGGC+GGG | - | chr5.3:20242365-20242384 | MS.gene069154:intron | 45.0% | |
| CAGTTCTTTCCTCTATCCCA+AGG | + | chr5.3:20239290-20239309 | None:intergenic | 45.0% | |
| CCATCCACTAATGCCTTTGA+TGG | - | chr5.3:20241824-20241843 | MS.gene069154:intron | 45.0% | |
| GAGCATCCTAACAAGGCTTT+CGG | - | chr5.3:20237160-20237179 | MS.gene069154:CDS | 45.0% | |
| GATTCACACAGTTATCGCGA+GGG | - | chr5.3:20239323-20239342 | MS.gene069154:intron | 45.0% | |
| GCAGGGAGAAAGATAATTGG+CGG | - | chr5.3:20242364-20242383 | MS.gene069154:intron | 45.0% | |
| GTATCAGCCATGCTTGATGA+AGG | + | chr5.3:20237337-20237356 | None:intergenic | 45.0% | |
| GTCCCCCTCAAACTCAAAAT+GGG | + | chr5.3:20238406-20238425 | None:intergenic | 45.0% | |
| TCAGAGGATTCCATGGTTCT+AGG | + | chr5.3:20238617-20238636 | None:intergenic | 45.0% | |
| TCCCCCTCAAACTCAAAATG+GGG | + | chr5.3:20238405-20238424 | None:intergenic | 45.0% | |
| TCCTAACAAGGCTTTCGGAT+GGG | - | chr5.3:20237165-20237184 | MS.gene069154:CDS | 45.0% | |
| TCTGGTGAAGTGACAAAGGT+GGG | - | chr5.3:20241005-20241024 | MS.gene069154:intron | 45.0% | |
| TGATTCACACAGTTATCGCG+AGG | - | chr5.3:20239322-20239341 | MS.gene069154:intron | 45.0% | |
| TGCCACTCATGTCAAAGTTG+TGG | - | chr5.3:20241089-20241108 | MS.gene069154:intron | 45.0% | |
| TTCTGGTGAAGTGACAAAGG+TGG | - | chr5.3:20241004-20241023 | MS.gene069154:intron | 45.0% | |
| TTGTTAGGATGCTCCATCTC+TGG | + | chr5.3:20237154-20237173 | None:intergenic | 45.0% | |
| TTTAGTCCCCAAACGATGTG+GGG | + | chr5.3:20237797-20237816 | None:intergenic | 45.0% | |
| TTTGATCCCGGTGGAAGAAT+TGG | - | chr5.3:20239200-20239219 | MS.gene069154:intron | 45.0% | |
| ! | AACATGGTATCAGAGCGCTA+TGG | - | chr5.3:20238642-20238661 | MS.gene069154:CDS | 45.0% |
| ! | ACTCCTCTCAGCTTTCGTTT+TGG | - | chr5.3:20239870-20239889 | MS.gene069154:intron | 45.0% |
| ! | AGAGATGGAGCATCCTAACA+AGG | - | chr5.3:20237153-20237172 | MS.gene069154:CDS | 45.0% |
| ! | CTCCTCTCAGCTTTCGTTTT+GGG | - | chr5.3:20239871-20239890 | MS.gene069154:intron | 45.0% |
| ! | CTTTTAGTCCCCAAACGATG+TGG | + | chr5.3:20237799-20237818 | None:intergenic | 45.0% |
| ! | GGAGAGTTCGGTTCAGATTT+TGG | - | chr5.3:20239654-20239673 | MS.gene069154:intron | 45.0% |
| ! | GTGGTAAGGCATCAGGAATA+CGG | + | chr5.3:20241235-20241254 | None:intergenic | 45.0% |
| !! | AAGACAGAAGCGTCGTAAAC+AGG | + | chr5.3:20239095-20239114 | None:intergenic | 45.0% |
| !! | AAGAGTACCCGGGAACTAAA+GGG | + | chr5.3:20240884-20240903 | None:intergenic | 45.0% |
| !! | ATCGTGTTACAGAAGCGTCT+TGG | - | chr5.3:20239633-20239652 | MS.gene069154:intron | 45.0% |
| !! | CCATCAAAGGCATTAGTGGA+TGG | + | chr5.3:20241827-20241846 | None:intergenic | 45.0% |
| !! | TAAGAGTACCCGGGAACTAA+AGG | + | chr5.3:20240885-20240904 | None:intergenic | 45.0% |
| !!! | GTTGTTTTCGGTAGCTTTGG+CGG | - | chr5.3:20238780-20238799 | MS.gene069154:intron | 45.0% |
| !!! | TCCCCATTTTGAGTTTGAGG+GGG | - | chr5.3:20238401-20238420 | MS.gene069154:CDS | 45.0% |
| !! | AATGTTTAAATAAAATATAT+AGG | + | chr5.3:20237406-20237425 | None:intergenic | 5.0% |
| !! | ATGTTTAAATAAAATATATA+GGG | + | chr5.3:20237405-20237424 | None:intergenic | 5.0% |
| !!! | ATTATCTTTTAAAAAAAATA+TGG | - | chr5.3:20238226-20238245 | MS.gene069154:CDS | 5.0% |
| !!! | TTATCTTTTAAAAAAAATAT+GGG | - | chr5.3:20238227-20238246 | MS.gene069154:CDS | 5.0% |
| ACCACACCCACATGTAAACC+AGG | + | chr5.3:20241332-20241351 | None:intergenic | 50.0% | |
| AGGAACGTCACCGATCTTGA+TGG | + | chr5.3:20238862-20238881 | None:intergenic | 50.0% | |
| AGTCCCCCTCAAACTCAAAG+TGG | + | chr5.3:20240056-20240075 | None:intergenic | 50.0% | |
| AGTGACAAAGGTGGGAAGCA+AGG | - | chr5.3:20241013-20241032 | MS.gene069154:intron | 50.0% | |
| AGTTGGAGACAAGGTAGGTG+TGG | - | chr5.3:20241049-20241068 | MS.gene069154:intron | 50.0% | |
| CACAGACCAATTCTTCCACC+GGG | + | chr5.3:20239209-20239228 | None:intergenic | 50.0% | |
| CACATGCTGAAGAACGAGTG+GGG | - | chr5.3:20240846-20240865 | MS.gene069154:intron | 50.0% | |
| CCACATGCTGAAGAACGAGT+GGG | - | chr5.3:20240845-20240864 | MS.gene069154:intron | 50.0% | |
| CCACGAACAAGACCAAATGC+AGG | - | chr5.3:20241487-20241506 | MS.gene069154:intron | 50.0% | |
| CCACTCACGTTTCTTCACCA+TGG | - | chr5.3:20238811-20238830 | MS.gene069154:intron | 50.0% | |
| CCATGGTGAAGAAACGTGAG+TGG | + | chr5.3:20238814-20238833 | None:intergenic | 50.0% | |
| CTGAATGTGTCTGGGTGCAA+TGG | - | chr5.3:20239503-20239522 | MS.gene069154:intron | 50.0% | |
| GAAAATGCGGGAAGCTCCAA+AGG | + | chr5.3:20241900-20241919 | None:intergenic | 50.0% | |
| GGTTTACATGTGGGTGTGGT+TGG | - | chr5.3:20241332-20241351 | MS.gene069154:intron | 50.0% | |
| GTTGGAGACAAGGTAGGTGT+GGG | - | chr5.3:20241050-20241069 | MS.gene069154:intron | 50.0% | |
| TCCACATGCTGAAGAACGAG+TGG | - | chr5.3:20240844-20240863 | MS.gene069154:intron | 50.0% | |
| TGGAGGCTACTCTGATACCA+TGG | - | chr5.3:20241187-20241206 | MS.gene069154:intron | 50.0% | |
| TGGATCGCACCAGAAACTGA+TGG | - | chr5.3:20238831-20238850 | MS.gene069154:CDS | 50.0% | |
| TTGGAGACAAGGTAGGTGTG+GGG | - | chr5.3:20241051-20241070 | MS.gene069154:intron | 50.0% | |
| TTGGAGTCCCCACATCGTTT+GGG | - | chr5.3:20237787-20237806 | MS.gene069154:CDS | 50.0% | |
| ! | AAGGTGCCCATTACAGCCTA+TGG | + | chr5.3:20241774-20241793 | None:intergenic | 50.0% |
| ! | ACGGATCACGAAGTGTTCGT+CGG | + | chr5.3:20241216-20241235 | None:intergenic | 50.0% |
| ! | ATTGGCGGGAGTATGATTGG+AGG | - | chr5.3:20242379-20242398 | MS.gene069154:intron | 50.0% |
| ! | GCATCAAGTGGTAAGGCATC+AGG | + | chr5.3:20241242-20241261 | None:intergenic | 50.0% |
| ! | TTGGCGGGAGTATGATTGGA+GGG | - | chr5.3:20242380-20242399 | MS.gene069154:intron | 50.0% |
| !! | CAGAAGCGTCTTGGAGAGTT+CGG | - | chr5.3:20239642-20239661 | MS.gene069154:intron | 50.0% |
| !! | CCTGCATTTGGTCTTGTTCG+TGG | + | chr5.3:20241490-20241509 | None:intergenic | 50.0% |
| !! | GCTGTAATGGGCACCTTTGA+TGG | - | chr5.3:20241777-20241796 | MS.gene069154:intron | 50.0% |
| !! | GTGGTTGGTCTTGGTGGATT+AGG | - | chr5.3:20241347-20241366 | MS.gene069154:intron | 50.0% |
| !! | TCAGTTTCTGGTGCGATCCA+TGG | + | chr5.3:20238831-20238850 | None:intergenic | 50.0% |
| !!! | ATCGTCGATTTTGATCCCGG+TGG | - | chr5.3:20239191-20239210 | MS.gene069154:intron | 50.0% |
| AGCAGCGGCATCAAGTGGTA+AGG | + | chr5.3:20241249-20241268 | None:intergenic | 55.0% | |
| CAGAGATGTTGAGCAAGCGC+AGG | + | chr5.3:20239897-20239916 | None:intergenic | 55.0% | |
| CCCACTCGTTCTTCAGCATG+TGG | + | chr5.3:20240848-20240867 | None:intergenic | 55.0% | |
| CTGCGCTTGCTCAACATCTC+TGG | - | chr5.3:20239895-20239914 | MS.gene069154:intron | 55.0% | |
| CTTGGAGTCCCCACATCGTT+TGG | - | chr5.3:20237786-20237805 | MS.gene069154:CDS | 55.0% | |
| GCCTGGTTTACATGTGGGTG+TGG | - | chr5.3:20241328-20241347 | MS.gene069154:intron | 55.0% | |
| GGAAGCTCCAAAGGCTTCTC+AGG | + | chr5.3:20241891-20241910 | None:intergenic | 55.0% | |
| GGCCCAAAACGAAAGCTGAG+AGG | + | chr5.3:20239876-20239895 | None:intergenic | 55.0% | |
| TCACACAGTTATCGCGAGGG+AGG | - | chr5.3:20239326-20239345 | MS.gene069154:intron | 55.0% | |
| TGGAGCTCCTGAGAAGCCTT+TGG | - | chr5.3:20241881-20241900 | MS.gene069154:intron | 55.0% | |
| TGGAGTCCCCACATCGTTTG+GGG | - | chr5.3:20237788-20237807 | MS.gene069154:CDS | 55.0% | |
| ! | GAAGTGTTCGTCGGCAACCA+TGG | + | chr5.3:20241207-20241226 | None:intergenic | 55.0% |
| !! | CATGTGGGTGTGGTTGGTCT+TGG | - | chr5.3:20241338-20241357 | MS.gene069154:intron | 55.0% |
| !! | GCCCATCCGAAAGCCTTGTT+AGG | + | chr5.3:20237169-20237188 | None:intergenic | 55.0% |
| AGAGGAGCAGCGGCATCAAG+TGG | + | chr5.3:20241254-20241273 | None:intergenic | 60.0% | |
| AGGCTTTCGGATGGGCAGCT+AGG | - | chr5.3:20237173-20237192 | MS.gene069154:CDS | 60.0% | |
| CAAGGTAGGTGTGGGGTGCA+TGG | - | chr5.3:20241058-20241077 | MS.gene069154:intron | 60.0% | |
| CCCAAGGGATCCCCCACAAA+CGG | + | chr5.3:20239274-20239293 | None:intergenic | 60.0% | |
| CCGTTTGTGGGGGATCCCTT+GGG | - | chr5.3:20239271-20239290 | MS.gene069154:intron | 60.0% | |
| CGCGCAAAGAAGAGGAGCAG+CGG | + | chr5.3:20241264-20241283 | None:intergenic | 60.0% | |
| CGCTGCTCCTCTTCTTTGCG+CGG | - | chr5.3:20241262-20241281 | MS.gene069154:intron | 60.0% | |
| CTGCTCCTCTTCTTTGCGCG+GGG | - | chr5.3:20241264-20241283 | MS.gene069154:intron | 60.0% | |
| GCTGCTCCTCTTCTTTGCGC+GGG | - | chr5.3:20241263-20241282 | MS.gene069154:intron | 60.0% | |
| GGCTTTCGGATGGGCAGCTA+GGG | - | chr5.3:20237174-20237193 | MS.gene069154:CDS | 60.0% | |
| GTAGGTGTGGGGTGCATGGT+TGG | - | chr5.3:20241062-20241081 | MS.gene069154:intron | 60.0% | |
| GTGATCCCCGCGCAAAGAAG+AGG | + | chr5.3:20241272-20241291 | None:intergenic | 60.0% | |
| TCCGTTTGTGGGGGATCCCT+TGG | - | chr5.3:20239270-20239289 | MS.gene069154:intron | 60.0% | |
| TGGGCAGCTAGGGACTCATC+TGG | - | chr5.3:20237184-20237203 | MS.gene069154:CDS | 60.0% | |
| TGGGGGATCCCTTGGGATAG+AGG | - | chr5.3:20239278-20239297 | MS.gene069154:intron | 60.0% | |
| !! | GTGGGTGTGGTTGGTCTTGG+TGG | - | chr5.3:20241341-20241360 | MS.gene069154:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 20237139 | 20242573 | 20237139 | ID=MS.gene069154 |
| chr5.3 | mRNA | 20237139 | 20242573 | 20237139 | ID=MS.gene069154.t1;Parent=MS.gene069154 |
| chr5.3 | exon | 20242476 | 20242573 | 20242476 | ID=MS.gene069154.t1.exon1;Parent=MS.gene069154.t1 |
| chr5.3 | CDS | 20242476 | 20242573 | 20242476 | ID=cds.MS.gene069154.t1;Parent=MS.gene069154.t1 |
| chr5.3 | exon | 20238817 | 20238930 | 20238817 | ID=MS.gene069154.t1.exon2;Parent=MS.gene069154.t1 |
| chr5.3 | CDS | 20238817 | 20238930 | 20238817 | ID=cds.MS.gene069154.t1;Parent=MS.gene069154.t1 |
| chr5.3 | exon | 20238204 | 20238717 | 20238204 | ID=MS.gene069154.t1.exon3;Parent=MS.gene069154.t1 |
| chr5.3 | CDS | 20238204 | 20238717 | 20238204 | ID=cds.MS.gene069154.t1;Parent=MS.gene069154.t1 |
| chr5.3 | exon | 20237782 | 20237935 | 20237782 | ID=MS.gene069154.t1.exon4;Parent=MS.gene069154.t1 |
| chr5.3 | CDS | 20237782 | 20237935 | 20237782 | ID=cds.MS.gene069154.t1;Parent=MS.gene069154.t1 |
| chr5.3 | exon | 20237139 | 20237344 | 20237139 | ID=MS.gene069154.t1.exon5;Parent=MS.gene069154.t1 |
| chr5.3 | CDS | 20237139 | 20237344 | 20237139 | ID=cds.MS.gene069154.t1;Parent=MS.gene069154.t1 |
| Gene Sequence |
| Protein sequence |
