AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70270.t1 MTR_8g092630 96.386 332 12 0 31 362 85 416 0.0 601
MS.gene70270.t1 MTR_5g031230 64.242 330 117 1 31 359 28 357 4.90e-153 435
MS.gene70270.t1 MTR_4g115300 64.242 330 117 1 31 359 28 357 2.16e-152 433
MS.gene70270.t1 MTR_5g031190 64.157 332 118 1 31 361 28 359 4.11e-150 427
MS.gene70270.t1 MTR_5g031310 61.212 330 127 1 31 359 29 358 2.08e-148 423
MS.gene70270.t1 MTR_5g031360 62.424 330 123 1 31 359 30 359 4.83e-148 422
MS.gene70270.t1 MTR_5g031390 62.048 332 125 1 31 361 28 359 1.80e-147 421
MS.gene70270.t1 MTR_5g031250 62.424 330 123 1 31 359 28 357 4.18e-147 420
MS.gene70270.t1 MTR_5g031305 60.606 330 129 1 31 359 29 358 5.91e-145 414
MS.gene70270.t1 MTR_8g068190 63.855 332 119 1 31 361 28 359 4.80e-143 410
MS.gene70270.t1 MTR_5g031300 57.273 330 140 1 31 359 29 358 1.87e-141 405
MS.gene70270.t1 MTR_5g031210 61.818 330 125 1 31 359 28 357 1.41e-140 403
MS.gene70270.t1 MTR_5g031180 62.952 332 122 1 31 361 28 359 6.79e-137 394
MS.gene70270.t1 MTR_1g025950 59.459 333 133 2 28 358 24 356 1.20e-131 380
MS.gene70270.t1 MTR_5g031430 57.879 330 138 1 31 359 28 357 6.55e-125 363
MS.gene70270.t1 MTR_1g107425 49.848 329 164 1 31 358 26 354 1.25e-108 322
MS.gene70270.t1 MTR_2g009810 51.247 361 167 4 1 359 52 405 2.09e-108 323
MS.gene70270.t1 MTR_5g031250 60.748 214 83 1 31 243 28 241 3.20e-89 269
MS.gene70270.t1 MTR_1g107425 50.566 265 129 2 31 294 26 289 5.06e-85 260
MS.gene70270.t1 MTR_2g009820 50.607 247 115 4 119 359 8 253 5.39e-63 202
MS.gene70270.t1 MTR_5g031290 64.602 113 40 0 249 361 80 192 1.19e-46 157
MS.gene70270.t1 MTR_5g031290 63.793 58 20 1 30 86 27 84 1.03e-17 80.9
MS.gene70270.t1 MTR_8g095220 28.188 298 180 12 12 281 53 344 3.07e-23 100
MS.gene70270.t1 MTR_8g095220 29.134 254 149 10 12 240 53 300 6.67e-22 95.1
MS.gene70270.t1 MTR_0001s0660 27.566 341 206 13 42 354 36 363 1.51e-16 80.9
MS.gene70270.t1 MTR_6g466320 25.000 276 185 7 33 295 32 298 1.83e-16 80.1
MS.gene70270.t1 MTR_6g465010 25.000 276 185 7 33 295 32 298 1.83e-16 80.1
MS.gene70270.t1 MTR_6g465010 25.000 276 185 7 33 295 16 282 2.16e-16 79.7
MS.gene70270.t1 MTR_7g099040 25.664 339 211 12 41 344 37 369 2.87e-14 73.6
MS.gene70270.t1 MTR_1g069430 25.217 345 213 13 36 344 32 367 2.75e-13 70.9
MS.gene70270.t1 MTR_3g099460 26.019 319 171 12 42 314 37 336 4.49e-13 70.1
MS.gene70270.t1 MTR_3g099460 26.019 319 171 12 42 314 44 343 5.49e-13 70.1
MS.gene70270.t1 MTR_8g064610 26.693 251 148 7 29 268 92 317 4.52e-12 67.0
MS.gene70270.t1 MTR_3g079180 25.839 298 186 13 42 309 41 333 7.24e-12 66.6
MS.gene70270.t1 MTR_3g099460 27.391 230 121 8 42 228 44 270 9.76e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70270.t1 AT4G39330 75.227 331 81 1 31 360 28 358 5.15e-179 501
MS.gene70270.t1 AT2G21890 70.695 331 95 2 31 359 22 352 4.92e-168 474
MS.gene70270.t1 AT2G21730 70.181 332 96 2 31 359 22 353 5.21e-168 474
MS.gene70270.t1 AT4G37990 66.061 330 111 1 31 359 24 353 3.85e-145 415
MS.gene70270.t1 AT4G37980 64.242 330 117 1 31 359 24 353 5.05e-144 412
MS.gene70270.t1 AT4G37970 58.735 332 136 1 31 361 29 360 5.71e-142 407
MS.gene70270.t1 AT4G39330 72.993 274 73 1 31 303 28 301 5.78e-139 397
MS.gene70270.t1 AT1G72680 52.812 320 149 2 41 359 36 354 1.88e-109 324
MS.gene70270.t1 AT4G37970 58.427 267 110 1 31 296 29 295 1.72e-108 320
MS.gene70270.t1 AT4G37980 61.624 271 103 1 31 300 24 294 4.07e-108 318
MS.gene70270.t1 AT3G19450 49.240 329 166 1 31 358 26 354 3.28e-101 303
MS.gene70270.t1 AT4G34230 49.848 329 164 1 31 358 25 353 1.46e-97 294
MS.gene70270.t1 AT4G34230 49.544 329 165 1 31 358 25 353 1.06e-96 291
MS.gene70270.t1 AT4G37970 56.682 217 93 1 31 246 29 245 2.50e-83 254
MS.gene70270.t1 AT4G37970 57.209 215 91 1 31 244 29 243 9.19e-83 253
MS.gene70270.t1 AT5G63620 25.905 359 225 13 33 355 73 426 4.90e-25 105
MS.gene70270.t1 AT5G63620 25.905 359 225 13 33 355 73 426 7.38e-25 105
MS.gene70270.t1 AT5G63620 29.730 222 130 7 33 231 73 291 7.84e-23 97.8
MS.gene70270.t1 AT5G51970 27.174 276 179 7 33 295 34 300 9.47e-20 89.7
MS.gene70270.t1 AT5G51970 27.174 276 179 7 33 295 34 300 9.47e-20 89.7
MS.gene70270.t1 AT5G43940 26.050 357 220 12 36 357 32 379 5.95e-19 87.8
MS.gene70270.t1 AT5G43940 26.050 357 220 12 36 357 44 391 7.54e-19 87.4
MS.gene70270.t1 AT1G22430 26.979 341 205 13 42 344 42 376 3.20e-18 85.5
MS.gene70270.t1 AT1G22430 26.979 341 205 13 42 344 42 376 3.20e-18 85.5
MS.gene70270.t1 AT4G22110 26.254 339 206 13 42 342 43 375 1.05e-16 81.3
MS.gene70270.t1 AT4G22110 26.254 339 206 13 42 342 43 375 1.05e-16 81.3
MS.gene70270.t1 AT1G64710 24.412 340 215 13 42 344 13 347 8.29e-16 78.2
MS.gene70270.t1 AT1G64710 24.412 340 215 13 42 344 36 370 1.28e-15 77.8
MS.gene70270.t1 AT1G22430 27.723 202 120 5 42 221 42 239 2.28e-14 73.6
MS.gene70270.t1 AT1G22430 27.723 202 120 5 42 221 42 239 3.88e-14 72.4
MS.gene70270.t1 AT1G22430 27.723 202 120 5 42 221 42 239 3.88e-14 72.4
MS.gene70270.t1 AT5G42250 23.512 336 219 10 42 342 45 377 7.57e-14 72.4
MS.gene70270.t1 AT1G22440 25.497 302 183 11 42 309 40 333 3.60e-13 70.5
MS.gene70270.t1 AT4G22110 27.528 178 104 4 42 198 43 216 6.59e-13 68.6
MS.gene70270.t1 AT1G77120 21.239 339 228 9 42 346 36 369 6.18e-11 63.5

Find 104 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAAATTCGGTAAAGCATT+TGG 0.245686 4.1:+8931861 MS.gene70270:CDS
ACTACTTACCCTGTTGTTCC+TGG 0.250937 4.1:+8929983 MS.gene70270:CDS
ACCTATAACTCTCCTTATAA+AGG 0.251163 4.1:+8931633 MS.gene70270:CDS
AACTCTCTACCGGCCAAATA+TGG 0.286545 4.1:-8929529 None:intergenic
ACTTAAAGATGGTCCATATT+TGG 0.298267 4.1:+8929516 MS.gene70270:CDS
TCTGTCTTTCCATTAGTTGC+AGG 0.301516 4.1:+8932766 MS.gene70270:CDS
GTGGCAGGGCTTGGTGGGTT+AGG 0.307365 4.1:+8931828 MS.gene70270:CDS
ATGGCCTCAGTTTCCTTGTT+TGG 0.311872 4.1:-8931912 None:intergenic
TGAGAATTGCAATCAAGATT+TGG 0.319987 4.1:+8931584 MS.gene70270:CDS
TAGGTTCGTGTCCCTTTATA+AGG 0.354122 4.1:-8931645 None:intergenic
TTGGGAGTGGCAGGGCTTGG+TGG 0.355141 4.1:+8931822 MS.gene70270:CDS
TTATAGGTAAATACAGGTTT+AGG 0.360036 4.1:-8931618 None:intergenic
CCCTTTATAAGGAGAGTTAT+AGG 0.360288 4.1:-8931634 None:intergenic
GTAGACCAAGCAGTGGCATC+AGG 0.373980 4.1:-8932687 None:intergenic
GATGGTTTACCTGCAACTAA+TGG 0.378875 4.1:-8932775 None:intergenic
TATAGCCCGATGAAGTATTA+TGG 0.379807 4.1:+8931777 MS.gene70270:CDS
GCCACTCCCAAATGTTTGCC+TGG 0.380570 4.1:-8931810 None:intergenic
CATACATACCCAGGAACAAC+AGG 0.380990 4.1:-8929992 None:intergenic
CCTATAACTCTCCTTATAAA+GGG 0.390671 4.1:+8931634 MS.gene70270:CDS
GGCAAACATTTGGGAGTGGC+AGG 0.391166 4.1:+8931813 MS.gene70270:CDS
ACAAAGCTGATGTGAAATAT+CGG 0.393376 4.1:+8933153 MS.gene70270:CDS
ACTGAAGTTGAATGGGAAAC+TGG 0.399835 4.1:+8932708 MS.gene70270:CDS
GACTGAACCAGGCAAACATT+TGG 0.404496 4.1:+8931803 MS.gene70270:CDS
TCAAATTCGGTAAAGCATTT+GGG 0.405047 4.1:+8931862 MS.gene70270:CDS
ACTGCAGGACGGAAGCTTAT+CGG 0.411894 4.1:+8933005 MS.gene70270:intron
CATTTGGGAGTGGCAGGGCT+TGG 0.412676 4.1:+8931819 MS.gene70270:CDS
GGCCATGTTGCAATCAAATT+CGG 0.413822 4.1:+8931849 MS.gene70270:CDS
GGAGAGTTATAGGTAAATAC+AGG 0.414003 4.1:-8931624 None:intergenic
CTACTTACCCTGTTGTTCCT+GGG 0.415236 4.1:+8929984 MS.gene70270:CDS
GTGCTCCACTTCTGTGTGCC+GGG 0.418161 4.1:+8931745 MS.gene70270:CDS
GGTGCTCCACTTCTGTGTGC+CGG 0.433744 4.1:+8931744 MS.gene70270:CDS
ACTGAACCAGGCAAACATTT+GGG 0.439930 4.1:+8931804 MS.gene70270:CDS
CATTCCCTGATGCCACTGCT+TGG 0.448606 4.1:+8932682 MS.gene70270:CDS
GGTAGAGAGTTACGTACATT+AGG 0.458747 4.1:+8929541 MS.gene70270:CDS
ACACACTCTCAAGAACGATT+GGG 0.475053 4.1:+8929955 MS.gene70270:CDS
AAGTGGAGCACCAGCGTCAA+GGG 0.477411 4.1:-8931733 None:intergenic
CGGTAAAGCATTTGGGCTGA+AGG 0.479081 4.1:+8931869 MS.gene70270:CDS
TACACACTCTCAAGAACGAT+TGG 0.482360 4.1:+8929954 MS.gene70270:CDS
CTCAGTTTCCTTGTTTGGAG+AGG 0.482678 4.1:-8931907 None:intergenic
GCGTCAAGGGGTAAGTTGTC+AGG 0.483209 4.1:-8931720 None:intergenic
TGGGAGTGGCAGGGCTTGGT+GGG 0.488091 4.1:+8931823 MS.gene70270:CDS
TCATACCATAATACTTCATC+GGG 0.495385 4.1:-8931782 None:intergenic
GAGAGCTCAAGGGGCTTGCT+AGG 0.495481 4.1:-8932745 None:intergenic
CTTGGTCTACTGAAGTTGAA+TGG 0.496517 4.1:+8932700 MS.gene70270:CDS
GTCATACCATAATACTTCAT+CGG 0.503227 4.1:-8931783 None:intergenic
GTTGGCGTTGTGACAAAAGT+TGG 0.504641 4.1:+8931489 MS.gene70270:CDS
GGCAGTTAGATGAGTGAAGG+AGG 0.509351 4.1:+8929490 None:intergenic
AGTGGCAGTTAGATGAGTGA+AGG 0.522851 4.1:+8929487 None:intergenic
TTGGTCTACTGAAGTTGAAT+GGG 0.524981 4.1:+8932701 MS.gene70270:CDS
AGCTTTGTGAAGCCTTTCCA+TGG 0.525881 4.1:-8933138 None:intergenic
TCTCAGGGTCTTTGGAAACA+AGG 0.527412 4.1:-8931959 None:intergenic
CGGGCTATACACGGTGATCC+CGG 0.532660 4.1:-8931763 None:intergenic
GCATGAAATCAACACGGCCA+TGG 0.534341 4.1:+8933121 MS.gene70270:CDS
ACTGAGGCCATTGTCAAACT+TGG 0.535898 4.1:+8931924 MS.gene70270:CDS
ATGGAAAGACAGAGAGCTCA+AGG 0.539760 4.1:-8932756 None:intergenic
GTGATCCCGGCACACAGAAG+TGG 0.541709 4.1:-8931750 None:intergenic
TATAAAGGGACACGAACCTA+TGG 0.552541 4.1:+8931648 MS.gene70270:CDS
AAATCAACACGGCCATGGAA+AGG 0.552965 4.1:+8933126 MS.gene70270:CDS
CTTATCGGAGGGAGTAACAT+TGG 0.554132 4.1:+8933020 MS.gene70270:CDS
AATGGGAAACTGGTCACTGT+AGG 0.556394 4.1:+8932718 MS.gene70270:CDS
CAAAGACCCTGAGAAAATGA+AGG 0.559572 4.1:+8931968 MS.gene70270:CDS
TAATGTACGTAACTCTCTAC+CGG 0.561278 4.1:-8929539 None:intergenic
TGGAGGGATGAAAGAGACTC+AGG 0.563071 4.1:+8933040 MS.gene70270:CDS
AAAGATGGTCCATATTTGGC+CGG 0.568080 4.1:+8929520 MS.gene70270:CDS
GAAGTGGAGCACCAGCGTCA+AGG 0.573782 4.1:-8931734 None:intergenic
CTACAAACTTGAGAAGGAGT+TGG 0.582204 4.1:-8933192 None:intergenic
TATTAGTACCTCTCCAAACA+AGG 0.586732 4.1:+8931899 MS.gene70270:CDS
CACACTCTCAAGAACGATTG+GGG 0.590819 4.1:+8929956 MS.gene70270:CDS
GCAGGCTGCTATGGGAACCA+TGG 0.590820 4.1:+8932630 MS.gene70270:intron
TATTATGGTATGACTGAACC+AGG 0.592818 4.1:+8931792 MS.gene70270:CDS
TGGCCTCTACAAACTTGAGA+AGG 0.595694 4.1:-8933198 None:intergenic
GCAAACATTTGGGAGTGGCA+GGG 0.595862 4.1:+8931814 MS.gene70270:CDS
AGAGAGTTACGTACATTAGG+TGG 0.598004 4.1:+8929544 MS.gene70270:CDS
TACCGAATTTGATTGCAACA+TGG 0.599803 4.1:-8931851 None:intergenic
ACCAGGCAAACATTTGGGAG+TGG 0.602207 4.1:+8931809 MS.gene70270:CDS
AAAATCAGAATAGCCACCAT+AGG 0.602620 4.1:-8931664 None:intergenic
TGGAAAGACAGAGAGCTCAA+GGG 0.604195 4.1:-8932755 None:intergenic
TCGGAGGGAGTAACATTGGA+GGG 0.606287 4.1:+8933024 MS.gene70270:CDS
TAGACCAAGCAGTGGCATCA+GGG 0.607212 4.1:-8932686 None:intergenic
ATCGGAGGGAGTAACATTGG+AGG 0.607417 4.1:+8933023 MS.gene70270:CDS
ACTCCTTCTCAAGTTTGTAG+AGG 0.609994 4.1:+8933195 MS.gene70270:CDS
GTGGGTGATAACGTTGGTGT+TGG 0.610605 4.1:+8931534 MS.gene70270:CDS
GAAACTGAACTACATACCGC+TGG 0.611677 4.1:-8931698 None:intergenic
GAAGGAGGTAGACTTAAAGA+TGG 0.613964 4.1:+8929505 MS.gene70270:CDS
GACAACTTACCCCTTGACGC+TGG 0.625682 4.1:+8931723 MS.gene70270:CDS
GGAAAGACAGAGAGCTCAAG+GGG 0.626737 4.1:-8932754 None:intergenic
AGTGTGAAAATTCTATATTG+TGG 0.629238 4.1:+8929914 MS.gene70270:CDS
CTCTCCAAACAAGGAAACTG+AGG 0.630189 4.1:+8931908 MS.gene70270:CDS
ATGGGAAACTGGTCACTGTA+GGG 0.633427 4.1:+8932719 MS.gene70270:CDS
ATCAGCACCAAGTTTGACAA+TGG 0.634155 4.1:-8931931 None:intergenic
AAAGTAAAGATGCTCATCCA+CGG 0.635118 4.1:-8929568 None:intergenic
AGTGGAGCACCAGCGTCAAG+GGG 0.637977 4.1:-8931732 None:intergenic
AAAGGGACACGAACCTATGG+TGG 0.638008 4.1:+8931651 MS.gene70270:CDS
TGTGTCTATGATGTAGTCCA+TGG 0.640415 4.1:-8932647 None:intergenic
CAGGAGATGCTCGATTTCTG+CGG 0.641521 4.1:+8933059 MS.gene70270:CDS
ATACTTCATCGGGCTATACA+CGG 0.644181 4.1:-8931772 None:intergenic
TTCAGAGTGGGTGATAACGT+TGG 0.661444 4.1:+8931528 MS.gene70270:CDS
GCAGGACGGAAGCTTATCGG+AGG 0.666483 4.1:+8933008 MS.gene70270:intron
CAGGACGGAAGCTTATCGGA+GGG 0.671442 4.1:+8933009 MS.gene70270:intron
ATATCGGTTTGTGATTGATG+TGG 0.686371 4.1:+8933169 MS.gene70270:CDS
AACTTCAGTAGACCAAGCAG+TGG 0.689529 4.1:-8932694 None:intergenic
TACGTACATTAGGTGGACCG+TGG 0.690372 4.1:+8929551 MS.gene70270:CDS
ATACATACCCAGGAACAACA+GGG 0.734302 4.1:-8929991 None:intergenic
TAAGATGCATGAAATCAACA+CGG 0.753982 4.1:+8933115 MS.gene70270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATATATTCAGAAATA+AGG - chr4.1:8932308-8932327 None:intergenic 10.0%
!!! AAATTTAAAATATTTTGTGT+AGG - chr4.1:8932179-8932198 None:intergenic 10.0%
!! TAGAATAATATAGTAATTGT+TGG + chr4.1:8932210-8932229 MS.gene70270:intron 15.0%
!! TATTTGATTGTTAAATTAGT+TGG + chr4.1:8931303-8931322 MS.gene70270:intron 15.0%
!!! TTTTCATATTTGTTTTCTTT+TGG + chr4.1:8932526-8932545 MS.gene70270:intron 15.0%
!! AAACTATTAATCAATAGTCA+AGG - chr4.1:8931337-8931356 None:intergenic 20.0%
!! AATTGATAGAGAATTATTGA+TGG - chr4.1:8932796-8932815 None:intergenic 20.0%
!! ATCCATAGTTTACTTATAAA+TGG + chr4.1:8932106-8932125 MS.gene70270:intron 20.0%
!! ATTTAATTATCTGTTCGTAA+GGG - chr4.1:8930673-8930692 None:intergenic 20.0%
!! CAATTCAAATTCACATATTA+TGG - chr4.1:8932827-8932846 None:intergenic 20.0%
!! TATTTAATTATCTGTTCGTA+AGG - chr4.1:8930674-8930693 None:intergenic 20.0%
!! TCCATAGTTTACTTATAAAT+GGG + chr4.1:8932107-8932126 MS.gene70270:intron 20.0%
!! TGAAAATTTGGATAATTCAT+TGG - chr4.1:8932969-8932988 None:intergenic 20.0%
!! TGTTAAACATGATTAAAAAC+AGG - chr4.1:8930722-8930741 None:intergenic 20.0%
!! TGTTGAATTGAATAGAAAAA+TGG + chr4.1:8930128-8930147 MS.gene70270:intron 20.0%
!! TTTGTTTATATACTCATTGA+CGG - chr4.1:8932381-8932400 None:intergenic 20.0%
!!! AGTGTATTTATTGACTTATA+CGG - chr4.1:8929607-8929626 None:intergenic 20.0%
!!! GTTTAAATACAATTTTATGC+AGG + chr4.1:8932612-8932631 MS.gene70270:intron 20.0%
!!! TAATTCACTTTATTTACCTT+TGG + chr4.1:8930349-8930368 MS.gene70270:intron 20.0%
!!! TCTTTTTCATTAATGGTTTA+TGG + chr4.1:8931029-8931048 MS.gene70270:intron 20.0%
!!! TGTTCATTCTTTTTCATTAA+TGG + chr4.1:8931022-8931041 MS.gene70270:intron 20.0%
!!! TTTATTTTTTGTAGGGAAAA+TGG + chr4.1:8929878-8929897 MS.gene70270:intron 20.0%
!!! TTTTCAAATTATTAGTGTGT+CGG - chr4.1:8930837-8930856 None:intergenic 20.0%
! AAACATACACATAATTCCAA+AGG - chr4.1:8930368-8930387 None:intergenic 25.0%
! AAACATGATTAAAAACAGGT+AGG - chr4.1:8930718-8930737 None:intergenic 25.0%
! AATGTGAAAAAATTCAGAGT+GGG + chr4.1:8931516-8931535 MS.gene70270:CDS 25.0%
! ACATTAGACATGTGAAAATT+TGG - chr4.1:8932981-8933000 None:intergenic 25.0%
! AGCTTATGAAAATTCTCATA+AGG - chr4.1:8930461-8930480 None:intergenic 25.0%
! AGTGTGAAAATTCTATATTG+TGG + chr4.1:8929914-8929933 MS.gene70270:CDS 25.0%
! CATACTTGTCTATTAGAATT+TGG + chr4.1:8930315-8930334 MS.gene70270:intron 25.0%
! CATTAATCCTAGTAAACTAT+TGG + chr4.1:8931069-8931088 MS.gene70270:intron 25.0%
! CTTGCTTATAAGTTATATGA+AGG + chr4.1:8931398-8931417 MS.gene70270:intron 25.0%
! TAATCATGTTTAACACACTT+AGG + chr4.1:8930727-8930746 MS.gene70270:intron 25.0%
! TAGGTGGTTATTCATATAAT+AGG - chr4.1:8930699-8930718 None:intergenic 25.0%
! TTAAGTGTAATTACAAGTGT+CGG + chr4.1:8930867-8930886 MS.gene70270:intron 25.0%
! TTATAGGTAAATACAGGTTT+AGG - chr4.1:8931621-8931640 None:intergenic 25.0%
!! AGACACATTATGTAATTTTG+AGG - chr4.1:8931104-8931123 None:intergenic 25.0%
!! TTTGGAATTATGTGTATGTT+TGG + chr4.1:8930367-8930386 MS.gene70270:intron 25.0%
!!! AACAAAAACAATGGATTGAT+TGG + chr4.1:8932562-8932581 MS.gene70270:intron 25.0%
!!! ACCTCTAATTTTAATTTGAG+GGG - chr4.1:8930181-8930200 None:intergenic 25.0%
!!! ACTTTTGAGGATTCAAATTA+AGG - chr4.1:8930763-8930782 None:intergenic 25.0%
!!! ATCCAGAAATTTTGAAAACT+GGG - chr4.1:8932358-8932377 None:intergenic 25.0%
!!! ATGTAATTTTGAGGTTACAT+GGG - chr4.1:8931095-8931114 None:intergenic 25.0%
!!! CACCTCTAATTTTAATTTGA+GGG - chr4.1:8930182-8930201 None:intergenic 25.0%
!!! TATGTAATTTTGAGGTTACA+TGG - chr4.1:8931096-8931115 None:intergenic 25.0%
AAAGAAAAACATACATACCC+AGG - chr4.1:8930004-8930023 None:intergenic 30.0%
AATTTGAGGGGTAAAGAATT+GGG - chr4.1:8930169-8930188 None:intergenic 30.0%
ACAAAGCTGATGTGAAATAT+CGG + chr4.1:8933153-8933172 MS.gene70270:CDS 30.0%
ACCCCTCAAATTAAAATTAG+AGG + chr4.1:8930177-8930196 MS.gene70270:intron 30.0%
ACCTATAACTCTCCTTATAA+AGG + chr4.1:8931633-8931652 MS.gene70270:CDS 30.0%
ACGAAATAAGAGTAAAACAG+CGG - chr4.1:8932049-8932068 None:intergenic 30.0%
ACTTAAAGATGGTCCATATT+TGG + chr4.1:8929516-8929535 MS.gene70270:CDS 30.0%
AGTTATATGAAGGTAAAACC+AGG + chr4.1:8931408-8931427 MS.gene70270:intron 30.0%
ATTAATAGTTTATGCGTGCA+TGG + chr4.1:8931346-8931365 MS.gene70270:intron 30.0%
CAAATTAAAATTAGAGGTGG+AGG + chr4.1:8930183-8930202 MS.gene70270:intron 30.0%
CAATGTGAAAAAATTCAGAG+TGG + chr4.1:8931515-8931534 MS.gene70270:CDS 30.0%
CCTATAACTCTCCTTATAAA+GGG + chr4.1:8931634-8931653 MS.gene70270:CDS 30.0%
CCTCAAATTAAAATTAGAGG+TGG + chr4.1:8930180-8930199 MS.gene70270:intron 30.0%
CCTGAGTTTGAATAATAGAA+AGG + chr4.1:8932416-8932435 MS.gene70270:intron 30.0%
CCTTTCTATTATTCAAACTC+AGG - chr4.1:8932419-8932438 None:intergenic 30.0%
CTATTCAATTCAACAGAAGA+CGG - chr4.1:8930123-8930142 None:intergenic 30.0%
CTTTGTGCAATAGTCAATAT+TGG + chr4.1:8931369-8931388 MS.gene70270:intron 30.0%
GAGAACACATGATTTGATTA+TGG - chr4.1:8932497-8932516 None:intergenic 30.0%
GAGAATAAGTGTAGGTTATT+TGG - chr4.1:8932244-8932263 None:intergenic 30.0%
GCCCATTTATAAGTAAACTA+TGG - chr4.1:8932111-8932130 None:intergenic 30.0%
GGTTGTTGTAACAAAAACAA+TGG + chr4.1:8932553-8932572 MS.gene70270:intron 30.0%
GTCATACCATAATACTTCAT+CGG - chr4.1:8931786-8931805 None:intergenic 30.0%
GTTCTATATAGGAGTTGTTA+TGG + chr4.1:8932075-8932094 MS.gene70270:intron 30.0%
TAAGATGCATGAAATCAACA+CGG + chr4.1:8933115-8933134 MS.gene70270:CDS 30.0%
TAATTTGAGGGGTAAAGAAT+TGG - chr4.1:8930170-8930189 None:intergenic 30.0%
TAGTTTACTTATAAATGGGC+AGG + chr4.1:8932111-8932130 MS.gene70270:intron 30.0%
TCATACCATAATACTTCATC+GGG - chr4.1:8931785-8931804 None:intergenic 30.0%
TGAGAATTGCAATCAAGATT+TGG + chr4.1:8931584-8931603 MS.gene70270:CDS 30.0%
TGAGCATGTATAAATGTTTC+AGG - chr4.1:8932891-8932910 None:intergenic 30.0%
TTCGTCATACAGTTCTATAT+AGG + chr4.1:8932064-8932083 MS.gene70270:intron 30.0%
! ATCAAATTCGGTAAAGCATT+TGG + chr4.1:8931861-8931880 MS.gene70270:CDS 30.0%
! ATCTTACCTTCATTTTCTCA+GGG - chr4.1:8931977-8931996 None:intergenic 30.0%
! GATGATATGTATGCGATTTT+TGG + chr4.1:8931203-8931222 MS.gene70270:intron 30.0%
! GGGGCACTATATATATTAAT+TGG - chr4.1:8932337-8932356 None:intergenic 30.0%
! TAAATGTTTCAGGTCAGATT+TGG - chr4.1:8932881-8932900 None:intergenic 30.0%
! TATCTTACCTTCATTTTCTC+AGG - chr4.1:8931978-8931997 None:intergenic 30.0%
! TCAAATTCGGTAAAGCATTT+GGG + chr4.1:8931862-8931881 MS.gene70270:CDS 30.0%
!! GATCCAGAAATTTTGAAAAC+TGG - chr4.1:8932359-8932378 None:intergenic 30.0%
!! TATTTGTTTTCTTTTGGACC+AGG + chr4.1:8932532-8932551 MS.gene70270:intron 30.0%
!! TCCAGAAATTTTGAAAACTG+GGG - chr4.1:8932357-8932376 None:intergenic 30.0%
!! TTTGCAACTATTCACTTTTG+AGG - chr4.1:8930776-8930795 None:intergenic 30.0%
!!! CAGGTTGGTTTTAAAGTTAA+TGG - chr4.1:8932006-8932025 None:intergenic 30.0%
!!! CCACCTCTAATTTTAATTTG+AGG - chr4.1:8930183-8930202 None:intergenic 30.0%
!!! TGGTTTTAAAGTTAATGGTG+TGG - chr4.1:8932001-8932020 None:intergenic 30.0%
!!! TTAACTTGCATTGACTTTTG+TGG + chr4.1:8931443-8931462 MS.gene70270:intron 30.0%
!!! TTGTTTTTGTTACAACAACC+TGG - chr4.1:8932553-8932572 None:intergenic 30.0%
AAAATCAGAATAGCCACCAT+AGG - chr4.1:8931667-8931686 None:intergenic 35.0%
AAAGTAAAGATGCTCATCCA+CGG - chr4.1:8929571-8929590 None:intergenic 35.0%
AACCTTCGAGAGAAATGAAA+GGG - chr4.1:8929772-8929791 None:intergenic 35.0%
CATGATTAAAAACAGGTAGG+TGG - chr4.1:8930715-8930734 None:intergenic 35.0%
CCCTTTATAAGGAGAGTTAT+AGG - chr4.1:8931637-8931656 None:intergenic 35.0%
CTGTGTTACAAATGAAGTGT+AGG + chr4.1:8931122-8931141 MS.gene70270:intron 35.0%
GGAGAGTTATAGGTAAATAC+AGG - chr4.1:8931627-8931646 None:intergenic 35.0%
GTATGACATAATCATCAAGC+AGG - chr4.1:8930290-8930309 None:intergenic 35.0%
GTCAAGTGTGATTTAAGTGT+GGG - chr4.1:8932273-8932292 None:intergenic 35.0%
TAATGTACGTAACTCTCTAC+CGG - chr4.1:8929542-8929561 None:intergenic 35.0%
TACCGAATTTGATTGCAACA+TGG - chr4.1:8931854-8931873 None:intergenic 35.0%
TACTTTGCAACTATGAAGCA+CGG - chr4.1:8930951-8930970 None:intergenic 35.0%
TATTAGTACCTCTCCAAACA+AGG + chr4.1:8931899-8931918 MS.gene70270:CDS 35.0%
TATTATGGTATGACTGAACC+AGG + chr4.1:8931792-8931811 MS.gene70270:CDS 35.0%
TGTCAAGTGTGATTTAAGTG+TGG - chr4.1:8932274-8932293 None:intergenic 35.0%
TTGGTCTACTGAAGTTGAAT+GGG + chr4.1:8932701-8932720 MS.gene70270:CDS 35.0%
! AAATTTTCCGCTTCTAGATC+GGG - chr4.1:8931247-8931266 None:intergenic 35.0%
! AATTTTATGCAGGCTGCTAT+GGG + chr4.1:8932622-8932641 MS.gene70270:intron 35.0%
! GAAATTTTCCGCTTCTAGAT+CGG - chr4.1:8931248-8931267 None:intergenic 35.0%
! TATAGCCCGATGAAGTATTA+TGG + chr4.1:8931777-8931796 MS.gene70270:CDS 35.0%
! TCACTGCAGTTTTCTATCTT+TGG + chr4.1:8931266-8931285 MS.gene70270:intron 35.0%
! TTTTGCAGGCATGAAATTGT+TGG + chr4.1:8931471-8931490 MS.gene70270:intron 35.0%
!! ATATCGGTTTGTGATTGATG+TGG + chr4.1:8933169-8933188 MS.gene70270:CDS 35.0%
!! CCAGAAATTTTGAAAACTGG+GGG - chr4.1:8932356-8932375 None:intergenic 35.0%
!! GATATGTATGCGATTTTTGG+TGG + chr4.1:8931206-8931225 MS.gene70270:intron 35.0%
AAAACCAACCTGTTTCGTCT+AGG + chr4.1:8932014-8932033 MS.gene70270:intron 40.0%
AAAGATGGTCCATATTTGGC+CGG + chr4.1:8929520-8929539 MS.gene70270:CDS 40.0%
ACACACTCTCAAGAACGATT+GGG + chr4.1:8929955-8929974 MS.gene70270:CDS 40.0%
ACATGGGCCAATAGTTTACT+AGG - chr4.1:8931079-8931098 None:intergenic 40.0%
ACTGAACCAGGCAAACATTT+GGG + chr4.1:8931804-8931823 MS.gene70270:CDS 40.0%
ACTGAAGTTGAATGGGAAAC+TGG + chr4.1:8932708-8932727 MS.gene70270:CDS 40.0%
AGAGAGTTACGTACATTAGG+TGG + chr4.1:8929544-8929563 MS.gene70270:CDS 40.0%
AGGTAAAACCAGGACATCTT+TGG + chr4.1:8931418-8931437 MS.gene70270:intron 40.0%
AGTTAATCCCAAAGATGTCC+TGG - chr4.1:8931429-8931448 None:intergenic 40.0%
AGTTGCAAAGCTATGAAGCA+CGG + chr4.1:8930787-8930806 MS.gene70270:intron 40.0%
ATAACCTAGACGAAACAGGT+TGG - chr4.1:8932021-8932040 None:intergenic 40.0%
ATAATAGCAGCTGAGATCGA+TGG + chr4.1:8929672-8929691 MS.gene70270:intron 40.0%
ATACATACCCAGGAACAACA+GGG - chr4.1:8929994-8930013 None:intergenic 40.0%
ATACTTCATCGGGCTATACA+CGG - chr4.1:8931775-8931794 None:intergenic 40.0%
ATCAGCACCAAGTTTGACAA+TGG - chr4.1:8931934-8931953 None:intergenic 40.0%
ATGTCTAATGTCTTGACTGC+AGG + chr4.1:8932990-8933009 MS.gene70270:intron 40.0%
CAAAGACCCTGAGAAAATGA+AGG + chr4.1:8931968-8931987 MS.gene70270:CDS 40.0%
CAATATTCCCGATCTAGAAG+CGG + chr4.1:8931237-8931256 MS.gene70270:intron 40.0%
CACTGCAAAGACTGGAAATA+AGG + chr4.1:8931181-8931200 MS.gene70270:intron 40.0%
CTACAAACTTGAGAAGGAGT+TGG - chr4.1:8933195-8933214 None:intergenic 40.0%
CTTGGTCTACTGAAGTTGAA+TGG + chr4.1:8932700-8932719 MS.gene70270:CDS 40.0%
GAACCTTCGAGAGAAATGAA+AGG - chr4.1:8929773-8929792 None:intergenic 40.0%
GAAGGAGGTAGACTTAAAGA+TGG + chr4.1:8929505-8929524 MS.gene70270:CDS 40.0%
GATGGTTTACCTGCAACTAA+TGG - chr4.1:8932778-8932797 None:intergenic 40.0%
GGAAGTAACAGACTCATTCT+TGG - chr4.1:8932860-8932879 None:intergenic 40.0%
GGCAAAGAGAGAATAAGTGT+AGG - chr4.1:8932252-8932271 None:intergenic 40.0%
GGCCATGTTGCAATCAAATT+CGG + chr4.1:8931849-8931868 MS.gene70270:CDS 40.0%
GGTAAAACCAGGACATCTTT+GGG + chr4.1:8931419-8931438 MS.gene70270:intron 40.0%
GGTAGAGAGTTACGTACATT+AGG + chr4.1:8929541-8929560 MS.gene70270:CDS 40.0%
GTCACAGATGTAGGCAAAAT+TGG + chr4.1:8932464-8932483 MS.gene70270:intron 40.0%
TACACACTCTCAAGAACGAT+TGG + chr4.1:8929954-8929973 MS.gene70270:CDS 40.0%
TAGGTTCGTGTCCCTTTATA+AGG - chr4.1:8931648-8931667 None:intergenic 40.0%
TATAAAGGGACACGAACCTA+TGG + chr4.1:8931648-8931667 MS.gene70270:CDS 40.0%
TCTGTCTTTCCATTAGTTGC+AGG + chr4.1:8932766-8932785 MS.gene70270:CDS 40.0%
TGTGTCTATGATGTAGTCCA+TGG - chr4.1:8932650-8932669 None:intergenic 40.0%
! ATTTTGTGGTTGTTCACCAG+CGG + chr4.1:8931682-8931701 MS.gene70270:CDS 40.0%
! CAATTTTATGCAGGCTGCTA+TGG + chr4.1:8932621-8932640 MS.gene70270:intron 40.0%
! CCCCCAGTTTTCAAAATTTC+TGG + chr4.1:8932353-8932372 MS.gene70270:intron 40.0%
! CTGCAGTTTTCTATCTTTGG+AGG + chr4.1:8931269-8931288 MS.gene70270:intron 40.0%
! CTTCATTTTCTCAGGGTCTT+TGG - chr4.1:8931970-8931989 None:intergenic 40.0%
! CTTTTGTGGTTGTGTTTTGC+AGG + chr4.1:8931457-8931476 MS.gene70270:intron 40.0%
! TGGTGGCTATTCTGATTTTG+TGG + chr4.1:8931668-8931687 MS.gene70270:CDS 40.0%
!! AAAAGCTTTGAGTGGGAGTT+CGG - chr4.1:8929713-8929732 None:intergenic 40.0%
AAATCAACACGGCCATGGAA+AGG + chr4.1:8933126-8933145 MS.gene70270:CDS 45.0%
AACTCTCTACCGGCCAAATA+TGG - chr4.1:8929532-8929551 None:intergenic 45.0%
AACTCTGCAGTCACAGATGT+AGG + chr4.1:8932455-8932474 MS.gene70270:intron 45.0%
AACTTCAGTAGACCAAGCAG+TGG - chr4.1:8932697-8932716 None:intergenic 45.0%
AATGGGAAACTGGTCACTGT+AGG + chr4.1:8932718-8932737 MS.gene70270:CDS 45.0%
ACTACTTACCCTGTTGTTCC+TGG + chr4.1:8929983-8930002 MS.gene70270:CDS 45.0%
ACTGAGGCCATTGTCAAACT+TGG + chr4.1:8931924-8931943 MS.gene70270:CDS 45.0%
ATGCATGTGTGATGTGGTGT+GGG + chr4.1:8932147-8932166 MS.gene70270:intron 45.0%
ATGGAAAGACAGAGAGCTCA+AGG - chr4.1:8932759-8932778 None:intergenic 45.0%
ATGGCCTCAGTTTCCTTGTT+TGG - chr4.1:8931915-8931934 None:intergenic 45.0%
ATGGGAAACTGGTCACTGTA+GGG + chr4.1:8932719-8932738 MS.gene70270:CDS 45.0%
CACACTCTCAAGAACGATTG+GGG + chr4.1:8929956-8929975 MS.gene70270:CDS 45.0%
CATACATACCCAGGAACAAC+AGG - chr4.1:8929995-8930014 None:intergenic 45.0%
CTAATGTCTTGACTGCAGGA+CGG + chr4.1:8932994-8933013 MS.gene70270:intron 45.0%
CTACTTACCCTGTTGTTCCT+GGG + chr4.1:8929984-8930003 MS.gene70270:CDS 45.0%
CTCCCTTTCATTTCTCTCGA+AGG + chr4.1:8929767-8929786 MS.gene70270:intron 45.0%
CTCTCCAAACAAGGAAACTG+AGG + chr4.1:8931908-8931927 MS.gene70270:CDS 45.0%
CTTATCGGAGGGAGTAACAT+TGG + chr4.1:8933020-8933039 MS.gene70270:CDS 45.0%
GAAACTGAACTACATACCGC+TGG - chr4.1:8931701-8931720 None:intergenic 45.0%
GACTGAACCAGGCAAACATT+TGG + chr4.1:8931803-8931822 MS.gene70270:CDS 45.0%
GAGCATAACCTAGACGAAAC+AGG - chr4.1:8932025-8932044 None:intergenic 45.0%
GTTGGCGTTGTGACAAAAGT+TGG + chr4.1:8931489-8931508 MS.gene70270:CDS 45.0%
TATAAATGGGCAGGTCGCTA+GGG + chr4.1:8932120-8932139 MS.gene70270:intron 45.0%
TGGAAAGACAGAGAGCTCAA+GGG - chr4.1:8932758-8932777 None:intergenic 45.0%
TTATAAATGGGCAGGTCGCT+AGG + chr4.1:8932119-8932138 MS.gene70270:intron 45.0%
TTCAAGTGCACTGCAAAGAC+TGG + chr4.1:8931173-8931192 MS.gene70270:intron 45.0%
TTTGAGTGGGAGTTCGGTTT+CGG - chr4.1:8929707-8929726 None:intergenic 45.0%
! AGCTTTGTGAAGCCTTTCCA+TGG - chr4.1:8933141-8933160 None:intergenic 45.0%
! CTCAGTTTCCTTGTTTGGAG+AGG - chr4.1:8931910-8931929 None:intergenic 45.0%
! GAACTCCCACTCAAAGCTTT+TGG + chr4.1:8929712-8929731 MS.gene70270:intron 45.0%
! TCCCACTCAAAGCTTTTGGT+TGG + chr4.1:8929716-8929735 MS.gene70270:intron 45.0%
! TCTCAGGGTCTTTGGAAACA+AGG - chr4.1:8931962-8931981 None:intergenic 45.0%
! TCTGTTCGTAAGGGCTTGTT+TGG - chr4.1:8930664-8930683 None:intergenic 45.0%
! TTCAGAGTGGGTGATAACGT+TGG + chr4.1:8931528-8931547 MS.gene70270:CDS 45.0%
!! CCCAACCAAAAGCTTTGAGT+GGG - chr4.1:8929720-8929739 None:intergenic 45.0%
!! CCCACTCAAAGCTTTTGGTT+GGG + chr4.1:8929717-8929736 MS.gene70270:intron 45.0%
!!! TTTTATTTTTATTTTTTGTA+GGG + chr4.1:8929871-8929890 MS.gene70270:intron 5.0%
!!! TTTTTATTTTTATTTTTTGT+AGG + chr4.1:8929870-8929889 MS.gene70270:intron 5.0%
AAAGGGACACGAACCTATGG+TGG + chr4.1:8931651-8931670 MS.gene70270:CDS 50.0%
ACCAGGCAAACATTTGGGAG+TGG + chr4.1:8931809-8931828 MS.gene70270:CDS 50.0%
ACTGCAGGACGGAAGCTTAT+CGG + chr4.1:8933005-8933024 MS.gene70270:intron 50.0%
ATCGGAGGGAGTAACATTGG+AGG + chr4.1:8933023-8933042 MS.gene70270:CDS 50.0%
CAGGAGATGCTCGATTTCTG+CGG + chr4.1:8933059-8933078 MS.gene70270:CDS 50.0%
GATGCATGTGTGATGTGGTG+TGG + chr4.1:8932146-8932165 MS.gene70270:intron 50.0%
GCAAACATTTGGGAGTGGCA+GGG + chr4.1:8931814-8931833 MS.gene70270:CDS 50.0%
GCATGAAATCAACACGGCCA+TGG + chr4.1:8933121-8933140 MS.gene70270:CDS 50.0%
GGAAAGACAGAGAGCTCAAG+GGG - chr4.1:8932757-8932776 None:intergenic 50.0%
TACGTACATTAGGTGGACCG+TGG + chr4.1:8929551-8929570 MS.gene70270:CDS 50.0%
TAGACCAAGCAGTGGCATCA+GGG - chr4.1:8932689-8932708 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG - chr4.1:8930940-8930959 None:intergenic 50.0%
TCGGAGGGAGTAACATTGGA+GGG + chr4.1:8933024-8933043 MS.gene70270:CDS 50.0%
TGGAGGGATGAAAGAGACTC+AGG + chr4.1:8933040-8933059 MS.gene70270:CDS 50.0%
TTGAGTGGGAGTTCGGTTTC+GGG - chr4.1:8929706-8929725 None:intergenic 50.0%
! CGGTAAAGCATTTGGGCTGA+AGG + chr4.1:8931869-8931888 MS.gene70270:CDS 50.0%
! GTGGGTGATAACGTTGGTGT+TGG + chr4.1:8931534-8931553 MS.gene70270:CDS 50.0%
!! GCCCAACCAAAAGCTTTGAG+TGG - chr4.1:8929721-8929740 None:intergenic 50.0%
!! TACAAGTGTCGGTCTCGTGT+TGG + chr4.1:8930878-8930897 MS.gene70270:intron 50.0%
CAGGACGGAAGCTTATCGGA+GGG + chr4.1:8933009-8933028 MS.gene70270:intron 55.0%
CATTCCCTGATGCCACTGCT+TGG + chr4.1:8932682-8932701 MS.gene70270:CDS 55.0%
GACAACTTACCCCTTGACGC+TGG + chr4.1:8931723-8931742 MS.gene70270:CDS 55.0%
GATTAGGCGTGTCCTGGTGT+CGG - chr4.1:8930918-8930937 None:intergenic 55.0%
GCCACTCCCAAATGTTTGCC+TGG - chr4.1:8931813-8931832 None:intergenic 55.0%
GCGTCAAGGGGTAAGTTGTC+AGG - chr4.1:8931723-8931742 None:intergenic 55.0%
GGACGGATGCATGTGTGATG+TGG + chr4.1:8932141-8932160 MS.gene70270:intron 55.0%
GGCAAACATTTGGGAGTGGC+AGG + chr4.1:8931813-8931832 MS.gene70270:CDS 55.0%
GTAGACCAAGCAGTGGCATC+AGG - chr4.1:8932690-8932709 None:intergenic 55.0%
TGAAGCACGGATACCGACAC+CGG + chr4.1:8930800-8930819 MS.gene70270:intron 55.0%
TGGGCTGCTAGAGACACTTC+TGG + chr4.1:8929736-8929755 MS.gene70270:intron 55.0%
! AAGTGGAGCACCAGCGTCAA+GGG - chr4.1:8931736-8931755 None:intergenic 55.0%
! TGTCGGTCTCGTGTTGGTGT+CGG + chr4.1:8930884-8930903 MS.gene70270:intron 55.0%
AATGGGCAGGTCGCTAGGGA+CGG + chr4.1:8932124-8932143 MS.gene70270:intron 60.0%
ACCAGGACACGCCTAATCCG+AGG + chr4.1:8930920-8930939 MS.gene70270:intron 60.0%
CATTTGGGAGTGGCAGGGCT+TGG + chr4.1:8931819-8931838 MS.gene70270:CDS 60.0%
CGGGCTATACACGGTGATCC+CGG - chr4.1:8931766-8931785 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG - chr4.1:8930934-8930953 None:intergenic 60.0%
GCAGGACGGAAGCTTATCGG+AGG + chr4.1:8933008-8933027 MS.gene70270:intron 60.0%
GCAGGCTGCTATGGGAACCA+TGG + chr4.1:8932630-8932649 MS.gene70270:intron 60.0%
GGTGCTCCACTTCTGTGTGC+CGG + chr4.1:8931744-8931763 MS.gene70270:CDS 60.0%
GTGATCCCGGCACACAGAAG+TGG - chr4.1:8931753-8931772 None:intergenic 60.0%
GTGCTCCACTTCTGTGTGCC+GGG + chr4.1:8931745-8931764 MS.gene70270:CDS 60.0%
TCGGACATGTGTCCGACACC+AGG + chr4.1:8930903-8930922 MS.gene70270:intron 60.0%
! AGTGGAGCACCAGCGTCAAG+GGG - chr4.1:8931735-8931754 None:intergenic 60.0%
! GAAGTGGAGCACCAGCGTCA+AGG - chr4.1:8931737-8931756 None:intergenic 60.0%
! GAGAGCTCAAGGGGCTTGCT+AGG - chr4.1:8932748-8932767 None:intergenic 60.0%
! TCCTCGGATTAGGCGTGTCC+TGG - chr4.1:8930924-8930943 None:intergenic 60.0%
! TGTGTCGGCGTGTCAGTGTC+CGG - chr4.1:8930822-8930841 None:intergenic 60.0%
GGCGTGTCAGTGTCCGGTGT+CGG - chr4.1:8930816-8930835 None:intergenic 65.0%
TTGGGAGTGGCAGGGCTTGG+TGG + chr4.1:8931822-8931841 MS.gene70270:CDS 65.0%
! TGGGAGTGGCAGGGCTTGGT+GGG + chr4.1:8931823-8931842 MS.gene70270:CDS 65.0%
!! GTGGCAGGGCTTGGTGGGTT+AGG + chr4.1:8931828-8931847 MS.gene70270:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 8929499 8933214 8929499 ID=MS.gene70270
chr4.1 mRNA 8929499 8933214 8929499 ID=MS.gene70270.t1;Parent=MS.gene70270
chr4.1 exon 8929499 8929605 8929499 ID=MS.gene70270.t1.exon1;Parent=MS.gene70270.t1
chr4.1 CDS 8929499 8929605 8929499 ID=cds.MS.gene70270.t1;Parent=MS.gene70270.t1
chr4.1 exon 8929892 8930005 8929892 ID=MS.gene70270.t1.exon2;Parent=MS.gene70270.t1
chr4.1 CDS 8929892 8930005 8929892 ID=cds.MS.gene70270.t1;Parent=MS.gene70270.t1
chr4.1 exon 8931479 8931989 8931479 ID=MS.gene70270.t1.exon3;Parent=MS.gene70270.t1
chr4.1 CDS 8931479 8931989 8931479 ID=cds.MS.gene70270.t1;Parent=MS.gene70270.t1
chr4.1 exon 8932634 8932787 8932634 ID=MS.gene70270.t1.exon4;Parent=MS.gene70270.t1
chr4.1 CDS 8932634 8932787 8932634 ID=cds.MS.gene70270.t1;Parent=MS.gene70270.t1
chr4.1 exon 8933012 8933214 8933012 ID=MS.gene70270.t1.exon5;Parent=MS.gene70270.t1
chr4.1 CDS 8933012 8933214 8933012 ID=cds.MS.gene70270.t1;Parent=MS.gene70270.t1
Gene Sequence

>MS.gene70270

ATGAGTGAAGGAGGTAGACTTAAAGATGGTCCATATTTGGCCGGTAGAGAGTTACGTACATTAGGTGGACCGTGGATGAGCATCTTTACTTTTTCTTTCTTTCTTCCGTATAAGTCAATAAATACACTAACACTACTTCATTCACATATCAAAAAGAAACGAGAACGCAGAGAATAATAGCAGCTGAGATCGATGGCGAAATCACCCGAAACCGAACTCCCACTCAAAGCTTTTGGTTGGGCTGCTAGAGACACTTCTGGCACACTCTCTCCCTTTCATTTCTCTCGAAGGTTCTTTTCTTTTCTTTTTTTTTTTCTTTTTCTTTTCATCTCAGTCTTTATAATTTTTTACGTGATTAATTTTTATTTTTATTTTTATTTTTATTTTTTGTAGGGAAAATGGTGATGATGATGTAAGTGTGAAAATTCTATATTGTGGAGTTTGTCATTCTGATCTACACACTCTCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCTGGGTATGTATGTTTTTCTTTTCTCTCTTTCTTTTACATTTTGCAGTGCATAATAGTATCATGCAAATCTCACTTATTTTTTAATTATTATTATATTATATTCTACTTTGTTTATTGCCGTCTTCTGTTGAATTGAATAGAAAAATGGATACAATAGTTGAATCCCAATTCTTTACCCCTCAAATTAAAATTAGAGGTGGAGGTTGTTTTTAAACTTAAAATATAATATATGATCTCACATCATGAATTATATATTGTTACTTTTTTCACTAAAAGACGCTCTGCCTGCTTGATGATTATGTCATACTCATACATACTTGTCTATTAGAATTTGGATCTAAATTCTTAATTCACTTTATTTACCTTTGGAATTATGTGTATGTTTGGATTGTTTTATTTGAGTTTATCTATTGACATAAGTTTTGTGAGATTGTTTGAAAGAACTTGTGAAAACACCTTATGAGAATTTTCATAAGCTTTTTTTAACTTATTTTCGTAAGTTCTTTGATATAGCTTATAAAAACAACTTATATCATATACAAAAACAATTTAACATTATTTTTTCTCTAGCTATAAAAATAGCTTATGCAAGCTTATACATAAGCGCTTATCATGATAAGTAAGTGCATGTACTTCAAGCTTCAAATAAGTTGTTTATCCAAACAAGCCCTTACGAACAGATAATTAAATAAACCTATTATATGAATAACCACCTACCTGTTTTTAATCATGTTTAACACACTTAGGCACTACATCACCTTAATTTGAATCCTCAAAAGTGAATAGTTGCAAAGCTATGAAGCACGGATACCGACACCGGACACTGACACGCCGACACACTAATAATTTGAAAAAATCACATAATTAAGTGTAATTACAAGTGTCGGTCTCGTGTTGGTGTCGGACATGTGTCCGACACCAGGACACGCCTAATCCGAGGAGTGTCCGTGCTTCATAGTTGCAAAGTATATCTATCATTGATTAATAAGTTAATCAATGAGCGTGTTGAAATATCAAATTGTTCATTCTTTTTCATTAATGGTTTATGGTACTTAAGTTTCTTCTTCATTAATCCTAGTAAACTATTGGCCCATGTAACCTCAAAATTACATAATGTGTCTGTGTTACAAATGAAGTGTAGGTGTGTTACAATTTTACAACTAATAATTATTCAAGTGCACTGCAAAGACTGGAAATAAGGATGATATGTATGCGATTTTTGGTGGAAATGATGCAATATTCCCGATCTAGAAGCGGAAAATTTCACTGCAGTTTTCTATCTTTGGAGGAAATGATGCAATATTTGATTGTTAAATTAGTTGGTTTCTCATCCTTGACTATTGATTAATAGTTTATGCGTGCATGGCTTTGTGCAATAGTCAATATTGGACATTACTTGCTTATAAGTTATATGAAGGTAAAACCAGGACATCTTTGGGATTAACTTGCATTGACTTTTGTGGTTGTGTTTTGCAGGCATGAAATTGTTGGCGTTGTGACAAAAGTTGGAATCAATGTGAAAAAATTCAGAGTGGGTGATAACGTTGGTGTTGGTGTAATTGTCGAGTCTTGTCAGACTTGTGAGAATTGCAATCAAGATTTGGAGCAGTACTGTCCTAAACCTGTATTTACCTATAACTCTCCTTATAAAGGGACACGAACCTATGGTGGCTATTCTGATTTTGTGGTTGTTCACCAGCGGTATGTAGTTCAGTTTCCTGACAACTTACCCCTTGACGCTGGTGCTCCACTTCTGTGTGCCGGGATCACCGTGTATAGCCCGATGAAGTATTATGGTATGACTGAACCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTCGGTAAAGCATTTGGGCTGAAGGTTACTGTTATTAGTACCTCTCCAAACAAGGAAACTGAGGCCATTGTCAAACTTGGTGCTGATTCTTTCCTTGTTTCCAAAGACCCTGAGAAAATGAAGGTAAGATACCACACCATTAACTTTAAAACCAACCTGTTTCGTCTAGGTTATGCTCTCCGCTGTTTTACTCTTATTTCGTCATACAGTTCTATATAGGAGTTGTTATGGATAATGATATCCATAGTTTACTTATAAATGGGCAGGTCGCTAGGGACGGATGCATGTGTGATGTGGTGTGGGCTTGTGCCTACACAAAATATTTTAAATTTTTATTTTTAAGTAGAATAATATAGTAATTGTTGGCATTTAGACCAAATAACCTACACTTATTCTCTCTTTGCCCACACTTAAATCACACTTGACACAACAACACAACCTTATTTCTGAATATATATTTAATGCTTCCAATTAATATATATAGTGCCCCCAGTTTTCAAAATTTCTGGATCCGTCAATGAGTATATAAACAAAATTAAATCTTGTAAACCTGAGTTTGAATAATAGAAAGGCACTGCAGTTTGCAGCAACTCTGCAGTCACAGATGTAGGCAAAATTGGTTGAACTCCATAATCAAATCATGTGTTCTCTGTTTGCGTTTTTCATATTTGTTTTCTTTTGGACCAGGTTGTTGTAACAAAAACAATGGATTGATTGGTTTAATATCTGCTTATAATGCATTTGTGTTTAAATACAATTTTATGCAGGCTGCTATGGGAACCATGGACTACATCATAGACACAATATCTGCTGCTCATTCCCTGATGCCACTGCTTGGTCTACTGAAGTTGAATGGGAAACTGGTCACTGTAGGGTTGCCTAGCAAGCCCCTTGAGCTCTCTGTCTTTCCATTAGTTGCAGGTAAACCATCAATAATTCTCTATCAATTCTTTAATGCCATAATATGTGAATTTGAATTGATGTTTGAAACCAAGAATGAGTCTGTTACTTCCAAATCTGACCTGAAACATTTATACATGCTCATCTATTCTTGAAACTTTCAACTACTCTACATTTCATTATGATACAGAGATTTTGACCAATGAATTATCCAAATTTTCACATGTCTAATGTCTTGACTGCAGGACGGAAGCTTATCGGAGGGAGTAACATTGGAGGGATGAAAGAGACTCAGGAGATGCTCGATTTCTGCGGCAAGCACAACATAACTGCAGATATTGAGTTGATTAAGATGCATGAAATCAACACGGCCATGGAAAGGCTTCACAAAGCTGATGTGAAATATCGGTTTGTGATTGATGTGGCCAACTCCTTCTCAAGTTTGTAG
Protein sequence

>MS.gene70270.t1

MSEGGRLKDGPYLAGRELRTLGGPWMSIFTFSFFLPENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIVKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSSL