Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070868.t1 | XP_003612973.2 | 97.5 | 361 | 9 | 0 | 1 | 361 | 33 | 393 | 4.40E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070868.t1 | P93257 | 77.0 | 357 | 82 | 0 | 3 | 359 | 4 | 360 | 7.0e-166 | 584.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070868.t1 | G7KGH6 | 97.5 | 361 | 9 | 0 | 1 | 361 | 1 | 361 | 3.2e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070868.t1 | MTR_5g031190 | 97.507 | 361 | 9 | 0 | 1 | 361 | 1 | 361 | 0.0 | 727 |
| MS.gene070868.t1 | MTR_5g031180 | 86.981 | 361 | 47 | 0 | 1 | 361 | 1 | 361 | 0.0 | 610 |
| MS.gene070868.t1 | MTR_8g068190 | 81.389 | 360 | 67 | 0 | 1 | 360 | 1 | 360 | 0.0 | 578 |
| MS.gene070868.t1 | MTR_5g031390 | 77.285 | 361 | 82 | 0 | 1 | 361 | 1 | 361 | 0.0 | 573 |
| MS.gene070868.t1 | MTR_5g031250 | 77.562 | 361 | 81 | 0 | 1 | 361 | 1 | 361 | 0.0 | 572 |
| MS.gene070868.t1 | MTR_5g031230 | 76.177 | 361 | 86 | 0 | 1 | 361 | 1 | 361 | 0.0 | 565 |
| MS.gene070868.t1 | MTR_5g031310 | 77.337 | 353 | 80 | 0 | 8 | 360 | 9 | 361 | 0.0 | 563 |
| MS.gene070868.t1 | MTR_5g031360 | 76.923 | 351 | 81 | 0 | 10 | 360 | 12 | 362 | 0.0 | 561 |
| MS.gene070868.t1 | MTR_4g115300 | 75.346 | 361 | 89 | 0 | 1 | 361 | 1 | 361 | 0.0 | 560 |
| MS.gene070868.t1 | MTR_5g031305 | 76.771 | 353 | 82 | 0 | 8 | 360 | 9 | 361 | 0.0 | 557 |
| MS.gene070868.t1 | MTR_5g031300 | 73.729 | 354 | 93 | 0 | 8 | 361 | 9 | 362 | 0.0 | 545 |
| MS.gene070868.t1 | MTR_5g031210 | 74.792 | 361 | 91 | 0 | 1 | 361 | 1 | 361 | 0.0 | 538 |
| MS.gene070868.t1 | MTR_8g092630 | 64.146 | 357 | 127 | 1 | 3 | 359 | 60 | 415 | 7.00e-153 | 437 |
| MS.gene070868.t1 | MTR_5g031430 | 60.335 | 358 | 142 | 0 | 1 | 358 | 1 | 358 | 3.50e-148 | 422 |
| MS.gene070868.t1 | MTR_1g025950 | 57.627 | 354 | 149 | 1 | 8 | 360 | 7 | 360 | 5.14e-137 | 394 |
| MS.gene070868.t1 | MTR_5g031250 | 75.934 | 241 | 58 | 0 | 1 | 241 | 1 | 241 | 2.93e-132 | 379 |
| MS.gene070868.t1 | MTR_1g107425 | 53.061 | 343 | 161 | 0 | 11 | 353 | 9 | 351 | 7.05e-125 | 363 |
| MS.gene070868.t1 | MTR_2g009810 | 54.624 | 346 | 155 | 2 | 14 | 358 | 62 | 406 | 1.52e-123 | 362 |
| MS.gene070868.t1 | MTR_1g107425 | 52.431 | 288 | 137 | 0 | 11 | 298 | 9 | 296 | 3.00e-99 | 296 |
| MS.gene070868.t1 | MTR_2g009820 | 51.200 | 250 | 112 | 4 | 116 | 358 | 8 | 254 | 1.33e-69 | 219 |
| MS.gene070868.t1 | MTR_5g031290 | 74.561 | 114 | 29 | 0 | 247 | 360 | 80 | 193 | 6.42e-55 | 179 |
| MS.gene070868.t1 | MTR_5g031290 | 80.000 | 80 | 15 | 1 | 1 | 79 | 1 | 80 | 1.36e-40 | 142 |
| MS.gene070868.t1 | MTR_8g095220 | 26.786 | 280 | 175 | 7 | 25 | 278 | 68 | 343 | 1.17e-23 | 101 |
| MS.gene070868.t1 | MTR_8g095220 | 28.099 | 242 | 149 | 6 | 25 | 245 | 68 | 305 | 3.79e-23 | 98.6 |
| MS.gene070868.t1 | MTR_3g089977 | 24.074 | 378 | 243 | 15 | 11 | 354 | 12 | 379 | 3.57e-18 | 85.1 |
| MS.gene070868.t1 | MTR_3g089940 | 24.457 | 368 | 235 | 14 | 11 | 344 | 12 | 370 | 5.07e-18 | 84.7 |
| MS.gene070868.t1 | MTR_0001s0660 | 26.159 | 302 | 199 | 9 | 38 | 318 | 35 | 333 | 6.39e-18 | 85.1 |
| MS.gene070868.t1 | MTR_3g089940 | 24.412 | 340 | 217 | 12 | 39 | 344 | 37 | 370 | 8.78e-18 | 84.3 |
| MS.gene070868.t1 | MTR_3g089970 | 23.824 | 340 | 219 | 12 | 39 | 344 | 38 | 371 | 3.65e-16 | 79.3 |
| MS.gene070868.t1 | MTR_3g089940 | 24.702 | 336 | 218 | 12 | 11 | 319 | 12 | 339 | 4.29e-16 | 79.0 |
| MS.gene070868.t1 | MTR_6g466320 | 26.000 | 300 | 198 | 9 | 1 | 288 | 6 | 293 | 7.54e-16 | 78.2 |
| MS.gene070868.t1 | MTR_6g465010 | 26.000 | 300 | 198 | 9 | 1 | 288 | 6 | 293 | 7.54e-16 | 78.2 |
| MS.gene070868.t1 | MTR_3g089940 | 24.405 | 336 | 219 | 12 | 11 | 319 | 12 | 339 | 7.90e-16 | 78.2 |
| MS.gene070868.t1 | MTR_6g465010 | 26.937 | 271 | 177 | 7 | 30 | 288 | 16 | 277 | 9.65e-16 | 77.8 |
| MS.gene070868.t1 | MTR_7g068320 | 26.648 | 349 | 219 | 14 | 39 | 353 | 48 | 393 | 9.73e-14 | 72.0 |
| MS.gene070868.t1 | MTR_5g045710 | 24.918 | 305 | 200 | 9 | 38 | 318 | 35 | 334 | 1.20e-13 | 71.6 |
| MS.gene070868.t1 | MTR_1g069430 | 23.810 | 336 | 227 | 8 | 1 | 312 | 1 | 331 | 1.39e-13 | 71.6 |
| MS.gene070868.t1 | MTR_7g099040 | 23.899 | 318 | 207 | 9 | 38 | 327 | 37 | 347 | 1.35e-12 | 68.6 |
| MS.gene070868.t1 | MTR_3g099460 | 26.537 | 309 | 197 | 8 | 39 | 319 | 37 | 343 | 2.99e-11 | 64.7 |
| MS.gene070868.t1 | MTR_3g099460 | 26.537 | 309 | 197 | 8 | 39 | 319 | 44 | 350 | 3.54e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070868.t1 | AT4G37970 | 66.479 | 355 | 119 | 0 | 6 | 360 | 7 | 361 | 3.51e-173 | 486 |
| MS.gene070868.t1 | AT4G37980 | 71.714 | 350 | 99 | 0 | 11 | 360 | 7 | 356 | 8.18e-173 | 485 |
| MS.gene070868.t1 | AT4G37990 | 72.571 | 350 | 96 | 0 | 11 | 360 | 7 | 356 | 3.81e-172 | 483 |
| MS.gene070868.t1 | AT4G39330 | 63.585 | 357 | 130 | 0 | 1 | 357 | 1 | 357 | 2.43e-169 | 476 |
| MS.gene070868.t1 | AT2G21730 | 61.891 | 349 | 131 | 2 | 11 | 357 | 5 | 353 | 9.59e-157 | 445 |
| MS.gene070868.t1 | AT2G21890 | 60.920 | 348 | 135 | 1 | 11 | 357 | 5 | 352 | 3.56e-155 | 441 |
| MS.gene070868.t1 | AT4G39330 | 62.460 | 309 | 116 | 0 | 1 | 309 | 1 | 309 | 4.38e-139 | 398 |
| MS.gene070868.t1 | AT4G37980 | 72.887 | 284 | 77 | 0 | 11 | 294 | 7 | 290 | 2.29e-135 | 388 |
| MS.gene070868.t1 | AT4G37970 | 65.398 | 289 | 100 | 0 | 6 | 294 | 7 | 295 | 1.91e-133 | 383 |
| MS.gene070868.t1 | AT3G19450 | 54.046 | 346 | 159 | 0 | 11 | 356 | 9 | 354 | 1.66e-118 | 347 |
| MS.gene070868.t1 | AT1G72680 | 48.883 | 358 | 180 | 2 | 1 | 358 | 1 | 355 | 2.65e-114 | 337 |
| MS.gene070868.t1 | AT4G34230 | 53.541 | 353 | 163 | 1 | 8 | 359 | 5 | 357 | 2.16e-109 | 324 |
| MS.gene070868.t1 | AT4G34230 | 53.258 | 353 | 164 | 1 | 8 | 359 | 5 | 357 | 1.67e-108 | 322 |
| MS.gene070868.t1 | AT4G37970 | 64.979 | 237 | 83 | 0 | 6 | 242 | 7 | 243 | 7.71e-106 | 311 |
| MS.gene070868.t1 | AT4G37970 | 64.979 | 237 | 83 | 0 | 6 | 242 | 7 | 243 | 8.14e-106 | 311 |
| MS.gene070868.t1 | AT5G63620 | 26.897 | 290 | 184 | 6 | 15 | 278 | 58 | 345 | 2.90e-25 | 106 |
| MS.gene070868.t1 | AT5G63620 | 27.491 | 291 | 181 | 7 | 15 | 278 | 58 | 345 | 3.23e-25 | 106 |
| MS.gene070868.t1 | AT5G63620 | 27.888 | 251 | 158 | 5 | 15 | 244 | 58 | 306 | 5.02e-24 | 101 |
| MS.gene070868.t1 | AT5G51970 | 26.812 | 276 | 179 | 8 | 15 | 278 | 21 | 285 | 1.12e-16 | 80.9 |
| MS.gene070868.t1 | AT5G51970 | 26.812 | 276 | 179 | 8 | 15 | 278 | 21 | 285 | 1.12e-16 | 80.9 |
| MS.gene070868.t1 | AT1G64710 | 24.516 | 310 | 199 | 10 | 39 | 318 | 13 | 317 | 3.21e-16 | 79.3 |
| MS.gene070868.t1 | AT1G64710 | 24.516 | 310 | 199 | 10 | 39 | 318 | 36 | 340 | 3.94e-16 | 79.3 |
| MS.gene070868.t1 | AT5G43940 | 24.262 | 305 | 205 | 6 | 39 | 319 | 36 | 338 | 7.32e-16 | 78.6 |
| MS.gene070868.t1 | AT5G43940 | 24.262 | 305 | 205 | 6 | 39 | 319 | 48 | 350 | 8.14e-16 | 78.6 |
| MS.gene070868.t1 | AT1G77120 | 23.631 | 347 | 230 | 13 | 39 | 354 | 36 | 378 | 3.28e-15 | 76.6 |
| MS.gene070868.t1 | AT1G32780 | 25.549 | 364 | 220 | 15 | 39 | 358 | 37 | 393 | 3.05e-13 | 70.9 |
Find 103 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGCCCTATGAAACATTT+TGG | 0.212281 | 5.4:-21326981 | MS.gene070868:CDS |
| CTTGGTCTATTGAAGAATAA+TGG | 0.272969 | 5.4:-21326578 | MS.gene070868:CDS |
| CGCCAAAGCCTTTGGGGTTA+AGG | 0.276300 | 5.4:-21326889 | MS.gene070868:CDS |
| TCAAGTCCAAAATGTTTCAT+AGG | 0.278051 | 5.4:+21326975 | None:intergenic |
| TGAAGTTCGCCAAAGCCTTT+GGG | 0.299698 | 5.4:-21326896 | MS.gene070868:CDS |
| GTTGTTGGTCTTGGTGGATT+AGG | 0.305881 | 5.4:-21326930 | MS.gene070868:CDS |
| GTGAAGTTCGCCAAAGCCTT+TGG | 0.307536 | 5.4:-21326897 | MS.gene070868:CDS |
| CTCCTTTCAAGTTCTCTAGA+AGG | 0.347990 | 5.4:-21328146 | MS.gene070868:intron |
| GATAGTGCCATCAACATTCT+TGG | 0.354624 | 5.4:+21327118 | None:intergenic |
| GTTGGTGTGGGGTGCATGGT+TGG | 0.355897 | 5.4:-21327215 | MS.gene070868:CDS |
| TACCTTAACCCCAAAGGCTT+TGG | 0.358168 | 5.4:+21326887 | None:intergenic |
| GCTGCTCCTCTCCTTTGTGC+TGG | 0.359169 | 5.4:-21327014 | MS.gene070868:CDS |
| GCTGTAATGGGCACGTTTGA+TGG | 0.372955 | 5.4:-21326644 | MS.gene070868:CDS |
| GGAAACTCCAAAGGCTTCTC+TGG | 0.377400 | 5.4:+21326533 | None:intergenic |
| CACATAGGTGTTGTTGGTCT+TGG | 0.390395 | 5.4:-21326939 | MS.gene070868:CDS |
| CCCACAATCAAAGAAAATAC+TGG | 0.392755 | 5.4:+21326512 | None:intergenic |
| GAATAATGGTAAACTTGTTA+TGG | 0.398732 | 5.4:-21326564 | MS.gene070868:CDS |
| CAGGGTTGGTGTGGGGTGCA+TGG | 0.404978 | 5.4:-21327219 | MS.gene070868:CDS |
| CAATATGTTATAGGCTGTAA+TGG | 0.405959 | 5.4:-21326657 | MS.gene070868:intron |
| ACTGGAACAACCTCAATATC+AGG | 0.408861 | 5.4:+21326317 | None:intergenic |
| AGACCAAGCAAAGGCATTAG+AGG | 0.414126 | 5.4:+21326593 | None:intergenic |
| ACTACTTACCCAGTAGTTCC+TGG | 0.414223 | 5.4:-21327422 | MS.gene070868:CDS |
| ATAGGTGTTGTTGGTCTTGG+TGG | 0.418861 | 5.4:-21326936 | MS.gene070868:CDS |
| TCTTGGTGGATTAGGTCATA+TGG | 0.422443 | 5.4:-21326922 | MS.gene070868:CDS |
| TACAGTTCCAAGAATGTTGA+TGG | 0.430392 | 5.4:-21327125 | MS.gene070868:CDS |
| CTGCTCCTCTCCTTTGTGCT+GGG | 0.434632 | 5.4:-21327013 | MS.gene070868:CDS |
| TATCGATTTGTTATTGACAT+TGG | 0.438397 | 5.4:-21326245 | MS.gene070868:CDS |
| TATTGGTACGCACCTTCATC+TGG | 0.442662 | 5.4:+21326778 | None:intergenic |
| CATCCTCTAATGCCTTTGCT+TGG | 0.446345 | 5.4:-21326596 | MS.gene070868:CDS |
| ATGCTCCGTTTCTGGATTTG+AGG | 0.446888 | 5.4:+21328218 | None:intergenic |
| AGTCAGCTCCTAAGTGTTCA+AGG | 0.448826 | 5.4:+21326826 | None:intergenic |
| CGCCACAACTTTGACATGAA+TGG | 0.451193 | 5.4:+21327186 | None:intergenic |
| TGGAGCTCCAGAGAAGCCTT+TGG | 0.454095 | 5.4:-21326540 | MS.gene070868:CDS |
| TTAGAGTACCCAGGAACTAC+TGG | 0.455836 | 5.4:+21327413 | None:intergenic |
| AATATGTTATAGGCTGTAAT+GGG | 0.459443 | 5.4:-21326656 | MS.gene070868:intron |
| AAAACTTCAAAGTTGGAGAC+AGG | 0.459613 | 5.4:-21327238 | MS.gene070868:CDS |
| TGTTGAAGACATGAAGTTGC+TGG | 0.463326 | 5.4:-21327290 | MS.gene070868:intron |
| GTTGATGGCACTATCACATA+TGG | 0.465804 | 5.4:-21327110 | MS.gene070868:CDS |
| AATGGTAAACTTGTTATGGT+TGG | 0.469139 | 5.4:-21326560 | MS.gene070868:CDS |
| GGACTGCACATAGGTGTTGT+TGG | 0.478905 | 5.4:-21326945 | MS.gene070868:CDS |
| AGTTGGAGACAGGGTTGGTG+TGG | 0.488731 | 5.4:-21327228 | MS.gene070868:CDS |
| AAGCTTTCGGATGGGCAGCT+AGG | 0.490753 | 5.4:-21328188 | MS.gene070868:CDS |
| GCATCAAGTGATAAGGCATC+AGG | 0.495160 | 5.4:+21327038 | None:intergenic |
| GTGATAAGGCATCAGGAATA+CGG | 0.500674 | 5.4:+21327045 | None:intergenic |
| AGCTTTCGGATGGGCAGCTA+GGG | 0.501441 | 5.4:-21328187 | MS.gene070868:CDS |
| CAAGTCCAAAATGTTTCATA+GGG | 0.502873 | 5.4:+21326976 | None:intergenic |
| TGGGCAGCTAGGGACACATC+TGG | 0.503109 | 5.4:-21328177 | MS.gene070868:CDS |
| TTTCAGGGAAACAGGGGAGA+AGG | 0.511637 | 5.4:-21327519 | MS.gene070868:intron |
| TGACATTGGAAACACGTTGA+AGG | 0.514460 | 5.4:-21326231 | MS.gene070868:CDS |
| GGAAACAGGGGAGAAGGATG+TGG | 0.515934 | 5.4:-21327513 | MS.gene070868:CDS |
| ACAATTGGTGGGAGTATGAT+TGG | 0.518826 | 5.4:-21326395 | MS.gene070868:CDS |
| GTTGGAGACAGGGTTGGTGT+GGG | 0.523836 | 5.4:-21327227 | MS.gene070868:CDS |
| AGCAGCGGCATCAAGTGATA+AGG | 0.524931 | 5.4:+21327031 | None:intergenic |
| TAGAGAACTTGAAAGGAGAA+AGG | 0.526536 | 5.4:+21328151 | None:intergenic |
| GAGTATGATTGGTGGGATGA+AGG | 0.527816 | 5.4:-21326384 | MS.gene070868:CDS |
| TTGGCAGGGAGAAAGACAAT+TGG | 0.543249 | 5.4:-21326410 | MS.gene070868:intron |
| GCAGGGAGAAAGACAATTGG+TGG | 0.544871 | 5.4:-21326407 | MS.gene070868:intron |
| TAGAGGATGGAGTGCTGAAA+CGG | 0.546944 | 5.4:+21326610 | None:intergenic |
| TGATATTGAGGTTGTTCCAG+TGG | 0.550536 | 5.4:-21326315 | MS.gene070868:CDS |
| GCAGTATTTACATAATCCAC+TGG | 0.550557 | 5.4:+21326299 | None:intergenic |
| CTTAGGAGCTGACTCATTCG+TGG | 0.554856 | 5.4:-21326817 | MS.gene070868:CDS |
| AAGGAAGCCCTTGAACACTT+AGG | 0.559865 | 5.4:-21326834 | MS.gene070868:CDS |
| ACAACACCTATGTGCAGTCC+AGG | 0.560025 | 5.4:+21326948 | None:intergenic |
| AGCACAAAGGAGAGGAGCAG+CGG | 0.561956 | 5.4:+21327016 | None:intergenic |
| CACAGTTACCTTAACCCCAA+AGG | 0.563973 | 5.4:+21326881 | None:intergenic |
| TGCCATTCATGTCAAAGTTG+TGG | 0.564351 | 5.4:-21327188 | MS.gene070868:CDS |
| TTGGTGGGAGTATGATTGGT+GGG | 0.564764 | 5.4:-21326391 | MS.gene070868:CDS |
| TGGCGTAAAACCTGATATTG+AGG | 0.570134 | 5.4:-21326327 | MS.gene070868:CDS |
| AATGGCCTCAAATCCAGAAA+CGG | 0.577912 | 5.4:-21328223 | MS.gene070868:CDS |
| CAAGCAAAGGCATTAGAGGA+TGG | 0.578766 | 5.4:+21326597 | None:intergenic |
| TTCAAAGTTGGAGACAGGGT+TGG | 0.579645 | 5.4:-21327233 | MS.gene070868:CDS |
| GAAAATACTGGAAACTCCAA+AGG | 0.580584 | 5.4:+21326524 | None:intergenic |
| CTACTTACCCAGTAGTTCCT+GGG | 0.589206 | 5.4:-21327421 | MS.gene070868:intron |
| ACAACTTTGACATGAATGGC+AGG | 0.589783 | 5.4:+21327190 | None:intergenic |
| AGTGACAGAGGTGGGAAGCA+AGG | 0.592868 | 5.4:-21327264 | MS.gene070868:CDS |
| TACCTTCTAGAGAACTTGAA+AGG | 0.595565 | 5.4:+21328144 | None:intergenic |
| CCACATGGCTAAGAATGAGT+GGG | 0.595627 | 5.4:-21327450 | MS.gene070868:CDS |
| GGATTATGTAAATACTGCAA+TGG | 0.611722 | 5.4:-21326294 | MS.gene070868:CDS |
| TCCACATGGCTAAGAATGAG+TGG | 0.611827 | 5.4:-21327451 | MS.gene070868:CDS |
| AAACTTCAAAGTTGGAGACA+GGG | 0.615703 | 5.4:-21327237 | MS.gene070868:CDS |
| ATTGGTGGGAGTATGATTGG+TGG | 0.616578 | 5.4:-21326392 | MS.gene070868:CDS |
| GAAGTTCGCCAAAGCCTTTG+GGG | 0.621609 | 5.4:-21326895 | MS.gene070868:CDS |
| TTGGAGACAGGGTTGGTGTG+GGG | 0.621846 | 5.4:-21327226 | MS.gene070868:CDS |
| TAGAGTACCCAGGAACTACT+GGG | 0.622352 | 5.4:+21327414 | None:intergenic |
| TTCTTCAATAGACCAAGCAA+AGG | 0.622643 | 5.4:+21326584 | None:intergenic |
| GACAAACCTGGACTGCACAT+AGG | 0.623406 | 5.4:-21326954 | MS.gene070868:CDS |
| GTCAGCTCCTAAGTGTTCAA+GGG | 0.623420 | 5.4:+21326827 | None:intergenic |
| ACTCATTCTTAGCCATGTGG+AGG | 0.625005 | 5.4:+21327453 | None:intergenic |
| ATGTCACTCGGACCTCCACA+TGG | 0.635155 | 5.4:-21327465 | MS.gene070868:CDS |
| TCGCGAACAAGACCAGATGA+AGG | 0.635463 | 5.4:-21326790 | MS.gene070868:intron |
| GCTGGTGAAGTGACAGAGGT+GGG | 0.643936 | 5.4:-21327272 | MS.gene070868:CDS |
| CCCACTCATTCTTAGCCATG+TGG | 0.645286 | 5.4:+21327450 | None:intergenic |
| CAGGGAGAAAGACAATTGGT+GGG | 0.647955 | 5.4:-21326406 | MS.gene070868:CDS |
| GTGATCCCAGCACAAAGGAG+AGG | 0.651936 | 5.4:+21327008 | None:intergenic |
| CTTTGGGGTTAAGGTAACTG+TGG | 0.655334 | 5.4:-21326880 | MS.gene070868:CDS |
| GATGGCACTATCACATATGG+AGG | 0.655594 | 5.4:-21327107 | MS.gene070868:CDS |
| TGCTGGTGAAGTGACAGAGG+TGG | 0.668343 | 5.4:-21327273 | MS.gene070868:CDS |
| TTCATGTCAAAGTTGTGGCG+AGG | 0.670954 | 5.4:-21327183 | MS.gene070868:CDS |
| CACATGGCTAAGAATGAGTG+GGG | 0.673842 | 5.4:-21327449 | MS.gene070868:CDS |
| TGGAGGCTACTCTGACACCA+TGG | 0.680550 | 5.4:-21327090 | MS.gene070868:CDS |
| AAAGTGTTCGTCGACAACCA+TGG | 0.696527 | 5.4:+21327073 | None:intergenic |
| ACACTGTGATCCCAGCACAA+AGG | 0.700831 | 5.4:+21327003 | None:intergenic |
| AGTTGCTGGTGAAGTGACAG+AGG | 0.727660 | 5.4:-21327276 | MS.gene070868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATTAAATAAACAATAA+TGG | + | chr5.4:21327069-21327088 | None:intergenic | 10.0% |
| !! | TATGTTATATTAAAATATGA+AGG | - | chr5.4:21327983-21328002 | MS.gene070868:intron | 10.0% |
| !! | TTACTATATAGAAATAAATT+TGG | + | chr5.4:21327717-21327736 | None:intergenic | 10.0% |
| !! | ATTATCCATAAAAAAAAATC+AGG | + | chr5.4:21326758-21326777 | None:intergenic | 15.0% |
| !!! | AAAATCCTGATTTTTTTTTA+TGG | - | chr5.4:21326750-21326769 | MS.gene070868:intron | 15.0% |
| !!! | AAAATTAGTTTGTTTTATGA+TGG | + | chr5.4:21327110-21327129 | None:intergenic | 15.0% |
| !!! | GACATATGATTTATTTTAAT+TGG | - | chr5.4:21326819-21326838 | MS.gene070868:CDS | 15.0% |
| !! | AAGTTAAAAGATTTAAAGAC+AGG | - | chr5.4:21326651-21326670 | MS.gene070868:intron | 20.0% |
| !! | AATGTTGTTCAATATGTTAT+AGG | - | chr5.4:21327776-21327795 | MS.gene070868:intron | 20.0% |
| !! | AGTTAAAAGATTTAAAGACA+GGG | - | chr5.4:21326652-21326671 | MS.gene070868:intron | 20.0% |
| !! | ATATACATCACATTAATTGT+TGG | - | chr5.4:21328013-21328032 | MS.gene070868:intron | 20.0% |
| !! | TCATTATAACAATTTCACTA+AGG | + | chr5.4:21326349-21326368 | None:intergenic | 20.0% |
| !! | TTGAACAACATTAGAATTAA+AGG | + | chr5.4:21327768-21327787 | None:intergenic | 20.0% |
| !!! | AATATTTTTCATTCCTTTTC+AGG | - | chr5.4:21326907-21326926 | MS.gene070868:CDS | 20.0% |
| !!! | ATATTTTTCATTCCTTTTCA+GGG | - | chr5.4:21326908-21326927 | MS.gene070868:CDS | 20.0% |
| ! | AATATGTTATAGGCTGTAAT+GGG | - | chr5.4:21327786-21327805 | MS.gene070868:intron | 25.0% |
| ! | AATGTTTGATGAAGGAAAAA+GGG | + | chr5.4:21326408-21326427 | None:intergenic | 25.0% |
| ! | TTAAACAATGCTAATCAAGA+TGG | - | chr5.4:21326500-21326519 | MS.gene070868:intron | 25.0% |
| !! | TATAGTAATCGATTTATCGA+TGG | - | chr5.4:21327729-21327748 | MS.gene070868:intron | 25.0% |
| !!! | GAATAATGGTAAACTTGTTA+TGG | - | chr5.4:21327878-21327897 | MS.gene070868:intron | 25.0% |
| !!! | TATCGATTTGTTATTGACAT+TGG | - | chr5.4:21328197-21328216 | MS.gene070868:CDS | 25.0% |
| AAGAAACATCTCATAAACGA+TGG | - | chr5.4:21326575-21326594 | MS.gene070868:CDS | 30.0% | |
| AAGGTGAAAAACTTCAAAGT+TGG | - | chr5.4:21327197-21327216 | MS.gene070868:CDS | 30.0% | |
| ACTAAAAATATAAACCGACG+TGG | + | chr5.4:21326451-21326470 | None:intergenic | 30.0% | |
| ACTCATTAAAAGCGAACTAT+TGG | + | chr5.4:21327684-21327703 | None:intergenic | 30.0% | |
| AGAAACATCTCATAAACGAT+GGG | - | chr5.4:21326576-21326595 | MS.gene070868:CDS | 30.0% | |
| CAAGTCCAAAATGTTTCATA+GGG | + | chr5.4:21327469-21327488 | None:intergenic | 30.0% | |
| CAATATGTTATAGGCTGTAA+TGG | - | chr5.4:21327785-21327804 | MS.gene070868:intron | 30.0% | |
| CAATGTTTGATGAAGGAAAA+AGG | + | chr5.4:21326409-21326428 | None:intergenic | 30.0% | |
| CTAAAAATATAAACCGACGT+GGG | + | chr5.4:21326450-21326469 | None:intergenic | 30.0% | |
| CTTGGTCTATTGAAGAATAA+TGG | - | chr5.4:21327864-21327883 | MS.gene070868:intron | 30.0% | |
| GGATTATGTAAATACTGCAA+TGG | - | chr5.4:21328148-21328167 | MS.gene070868:CDS | 30.0% | |
| TACTTCTCCTAACAAAAAGA+AGG | - | chr5.4:21327589-21327608 | MS.gene070868:intron | 30.0% | |
| TCAAGTCCAAAATGTTTCAT+AGG | + | chr5.4:21327470-21327489 | None:intergenic | 30.0% | |
| ! | ATCTCTTATGTTTTCTCAAG+CGG | + | chr5.4:21326689-21326708 | None:intergenic | 30.0% |
| ! | CCAGTATTTTCTTTGATTGT+GGG | - | chr5.4:21327930-21327949 | MS.gene070868:intron | 30.0% |
| ! | CTTTTTCCTTCATCAAACAT+TGG | - | chr5.4:21326407-21326426 | MS.gene070868:intron | 30.0% |
| ! | TAATCAAGATGGTTTTCACT+TGG | - | chr5.4:21326511-21326530 | MS.gene070868:intron | 30.0% |
| ! | TATAGCCCTATGAAACATTT+TGG | - | chr5.4:21327461-21327480 | MS.gene070868:CDS | 30.0% |
| ! | TCCAGTATTTTCTTTGATTG+TGG | - | chr5.4:21327929-21327948 | MS.gene070868:intron | 30.0% |
| !! | AATGGTAAACTTGTTATGGT+TGG | - | chr5.4:21327882-21327901 | MS.gene070868:intron | 30.0% |
| !! | GCATTCAAAGTACTATTTTG+CGG | - | chr5.4:21326951-21326970 | MS.gene070868:CDS | 30.0% |
| AAAACTTCAAAGTTGGAGAC+AGG | - | chr5.4:21327204-21327223 | MS.gene070868:CDS | 35.0% | |
| AAACTTCAAAGTTGGAGACA+GGG | - | chr5.4:21327205-21327224 | MS.gene070868:CDS | 35.0% | |
| ACATCACATTAATTGTTGGC+AGG | - | chr5.4:21328017-21328036 | MS.gene070868:intron | 35.0% | |
| CATCACATTAATTGTTGGCA+GGG | - | chr5.4:21328018-21328037 | MS.gene070868:intron | 35.0% | |
| CCCACAATCAAAGAAAATAC+TGG | + | chr5.4:21327933-21327952 | None:intergenic | 35.0% | |
| GAAAATACTGGAAACTCCAA+AGG | + | chr5.4:21327921-21327940 | None:intergenic | 35.0% | |
| GAAACATCTCATAAACGATG+GGG | - | chr5.4:21326577-21326596 | MS.gene070868:CDS | 35.0% | |
| GCAGTATTTACATAATCCAC+TGG | + | chr5.4:21328146-21328165 | None:intergenic | 35.0% | |
| TACAGTTCCAAGAATGTTGA+TGG | - | chr5.4:21327317-21327336 | MS.gene070868:intron | 35.0% | |
| TACATCACACATCAACATTC+AGG | + | chr5.4:21326731-21326750 | None:intergenic | 35.0% | |
| TAGAGAACTTGAAAGGAGAA+AGG | + | chr5.4:21326294-21326313 | None:intergenic | 35.0% | |
| TTCTTCAATAGACCAAGCAA+AGG | + | chr5.4:21327861-21327880 | None:intergenic | 35.0% | |
| ! | ATTTTGCGGTATATGTCACT+CGG | - | chr5.4:21326965-21326984 | MS.gene070868:CDS | 35.0% |
| ! | TACCTTCTAGAGAACTTGAA+AGG | + | chr5.4:21326301-21326320 | None:intergenic | 35.0% |
| ! | TCTCTTATGTTTTCTCAAGC+GGG | + | chr5.4:21326688-21326707 | None:intergenic | 35.0% |
| !! | ATTGATTTTGCAGCCAAACA+TGG | - | chr5.4:21328095-21328114 | MS.gene070868:intron | 35.0% |
| !! | TTTTTGATGTTAGAGTACCC+AGG | + | chr5.4:21327041-21327060 | None:intergenic | 35.0% |
| ACAACTTTGACATGAATGGC+AGG | + | chr5.4:21327255-21327274 | None:intergenic | 40.0% | |
| ACTGGAACAACCTCAATATC+AGG | + | chr5.4:21328128-21328147 | None:intergenic | 40.0% | |
| AGGCTGCATGAATACATGAA+TGG | + | chr5.4:21326329-21326348 | None:intergenic | 40.0% | |
| ATCCCAAAAAAGCTTTCGGA+TGG | - | chr5.4:21326245-21326264 | MS.gene070868:CDS | 40.0% | |
| GAGCATCCCAAAAAAGCTTT+CGG | - | chr5.4:21326241-21326260 | MS.gene070868:CDS | 40.0% | |
| GATAGTGCCATCAACATTCT+TGG | + | chr5.4:21327327-21327346 | None:intergenic | 40.0% | |
| GCATATAAAACTTCCCACGT+CGG | - | chr5.4:21326434-21326453 | MS.gene070868:intron | 40.0% | |
| TCCCAAAAAAGCTTTCGGAT+GGG | - | chr5.4:21326246-21326265 | MS.gene070868:CDS | 40.0% | |
| TGACATTGGAAACACGTTGA+AGG | - | chr5.4:21328211-21328230 | MS.gene070868:CDS | 40.0% | |
| TGATATTGAGGTTGTTCCAG+TGG | - | chr5.4:21328127-21328146 | MS.gene070868:intron | 40.0% | |
| TGCCATTCATGTCAAAGTTG+TGG | - | chr5.4:21327254-21327273 | MS.gene070868:CDS | 40.0% | |
| TGGCGTAAAACCTGATATTG+AGG | - | chr5.4:21328115-21328134 | MS.gene070868:intron | 40.0% | |
| TGTTGAAGACATGAAGTTGC+TGG | - | chr5.4:21327152-21327171 | MS.gene070868:CDS | 40.0% | |
| ! | ACAATTGGTGGGAGTATGAT+TGG | - | chr5.4:21328047-21328066 | MS.gene070868:intron | 40.0% |
| ! | AGGGCTTCCTTCTTTTTGTT+AGG | + | chr5.4:21327599-21327618 | None:intergenic | 40.0% |
| ! | ATCAGGTTTTACGCCATGTT+TGG | + | chr5.4:21328111-21328130 | None:intergenic | 40.0% |
| ! | CATTTTGGACTTGACAAACC+TGG | - | chr5.4:21327476-21327495 | MS.gene070868:CDS | 40.0% |
| ! | CTTGATGACCTAAATTGCAC+TGG | + | chr5.4:21326631-21326650 | None:intergenic | 40.0% |
| ! | GTGATAAGGCATCAGGAATA+CGG | + | chr5.4:21327400-21327419 | None:intergenic | 40.0% |
| !! | ATTCCTTTTCAGGGAAACAG+GGG | - | chr5.4:21326917-21326936 | MS.gene070868:CDS | 40.0% |
| !! | CATTCCTTTTCAGGGAAACA+GGG | - | chr5.4:21326916-21326935 | MS.gene070868:CDS | 40.0% |
| !! | CTCCTTTCAAGTTCTCTAGA+AGG | - | chr5.4:21326296-21326315 | MS.gene070868:CDS | 40.0% |
| !! | GTTGATGGCACTATCACATA+TGG | - | chr5.4:21327332-21327351 | MS.gene070868:intron | 40.0% |
| !! | TCATTCCTTTTCAGGGAAAC+AGG | - | chr5.4:21326915-21326934 | MS.gene070868:CDS | 40.0% |
| !! | TCTTGGTGGATTAGGTCATA+TGG | - | chr5.4:21327520-21327539 | MS.gene070868:intron | 40.0% |
| AAGGAAGCCCTTGAACACTT+AGG | - | chr5.4:21327608-21327627 | MS.gene070868:intron | 45.0% | |
| ACTACTTACCCAGTAGTTCC+TGG | - | chr5.4:21327020-21327039 | MS.gene070868:CDS | 45.0% | |
| ACTCATTCTTAGCCATGTGG+AGG | + | chr5.4:21326992-21327011 | None:intergenic | 45.0% | |
| ACTGGATCATCTCTAGCGAA+CGG | - | chr5.4:21326600-21326619 | MS.gene070868:CDS | 45.0% | |
| AGTCAGCTCCTAAGTGTTCA+AGG | + | chr5.4:21327619-21327638 | None:intergenic | 45.0% | |
| ATCTCATAAACGATGGGGAC+TGG | - | chr5.4:21326582-21326601 | MS.gene070868:CDS | 45.0% | |
| ATGAAGGAAAAAGGGACGCA+AGG | + | chr5.4:21326400-21326419 | None:intergenic | 45.0% | |
| CACAGTTACCTTAACCCCAA+AGG | + | chr5.4:21327564-21327583 | None:intergenic | 45.0% | |
| CACATGGCTAAGAATGAGTG+GGG | - | chr5.4:21326993-21327012 | MS.gene070868:CDS | 45.0% | |
| CAGGGAGAAAGACAATTGGT+GGG | - | chr5.4:21328036-21328055 | MS.gene070868:intron | 45.0% | |
| CATCCTCTAATGCCTTTGCT+TGG | - | chr5.4:21327846-21327865 | MS.gene070868:intron | 45.0% | |
| CCACATGGCTAAGAATGAGT+GGG | - | chr5.4:21326992-21327011 | MS.gene070868:CDS | 45.0% | |
| CGCCACAACTTTGACATGAA+TGG | + | chr5.4:21327259-21327278 | None:intergenic | 45.0% | |
| CTACTTACCCAGTAGTTCCT+GGG | - | chr5.4:21327021-21327040 | MS.gene070868:CDS | 45.0% | |
| GAGTATGATTGGTGGGATGA+AGG | - | chr5.4:21328058-21328077 | MS.gene070868:intron | 45.0% | |
| GATGGCACTATCACATATGG+AGG | - | chr5.4:21327335-21327354 | MS.gene070868:intron | 45.0% | |
| GCATCGCCAATGTTTGATGA+AGG | + | chr5.4:21326416-21326435 | None:intergenic | 45.0% | |
| GTCAGCTCCTAAGTGTTCAA+GGG | + | chr5.4:21327618-21327637 | None:intergenic | 45.0% | |
| TACCTTAACCCCAAAGGCTT+TGG | + | chr5.4:21327558-21327577 | None:intergenic | 45.0% | |
| TATTGGTACGCACCTTCATC+TGG | + | chr5.4:21327667-21327686 | None:intergenic | 45.0% | |
| TCCACATGGCTAAGAATGAG+TGG | - | chr5.4:21326991-21327010 | MS.gene070868:CDS | 45.0% | |
| TGAAGTTCGCCAAAGCCTTT+GGG | - | chr5.4:21327546-21327565 | MS.gene070868:intron | 45.0% | |
| TTCAAAGTTGGAGACAGGGT+TGG | - | chr5.4:21327209-21327228 | MS.gene070868:CDS | 45.0% | |
| TTCATGTCAAAGTTGTGGCG+AGG | - | chr5.4:21327259-21327278 | MS.gene070868:CDS | 45.0% | |
| TTGGCAGGGAGAAAGACAAT+TGG | - | chr5.4:21328032-21328051 | MS.gene070868:intron | 45.0% | |
| ! | AAAGTGTTCGTCGACAACCA+TGG | + | chr5.4:21327372-21327391 | None:intergenic | 45.0% |
| ! | ATGCTCCGTTTCTGGATTTG+AGG | + | chr5.4:21326227-21326246 | None:intergenic | 45.0% |
| ! | ATTGGTGGGAGTATGATTGG+TGG | - | chr5.4:21328050-21328069 | MS.gene070868:intron | 45.0% |
| ! | GCATCAAGTGATAAGGCATC+AGG | + | chr5.4:21327407-21327426 | None:intergenic | 45.0% |
| ! | TAGAGTACCCAGGAACTACT+GGG | + | chr5.4:21327031-21327050 | None:intergenic | 45.0% |
| ! | TTAGAGTACCCAGGAACTAC+TGG | + | chr5.4:21327032-21327051 | None:intergenic | 45.0% |
| ! | TTGGTGGGAGTATGATTGGT+GGG | - | chr5.4:21328051-21328070 | MS.gene070868:intron | 45.0% |
| !! | AGACCAAGCAAAGGCATTAG+AGG | + | chr5.4:21327852-21327871 | None:intergenic | 45.0% |
| !! | ATAGGTGTTGTTGGTCTTGG+TGG | - | chr5.4:21327506-21327525 | MS.gene070868:CDS | 45.0% |
| !! | CAAGCAAAGGCATTAGAGGA+TGG | + | chr5.4:21327848-21327867 | None:intergenic | 45.0% |
| !! | CACATAGGTGTTGTTGGTCT+TGG | - | chr5.4:21327503-21327522 | MS.gene070868:CDS | 45.0% |
| !! | CTTTGGGGTTAAGGTAACTG+TGG | - | chr5.4:21327562-21327581 | MS.gene070868:intron | 45.0% |
| !! | GTTGTTGGTCTTGGTGGATT+AGG | - | chr5.4:21327512-21327531 | MS.gene070868:CDS | 45.0% |
| !! | TAGAGGATGGAGTGCTGAAA+CGG | + | chr5.4:21327835-21327854 | None:intergenic | 45.0% |
| !!! | GCCCATCCGAAAGCTTTTTT+GGG | + | chr5.4:21326250-21326269 | None:intergenic | 45.0% |
| !!! | TGCCCATCCGAAAGCTTTTT+TGG | + | chr5.4:21326251-21326270 | None:intergenic | 45.0% |
| !!! | TTTTTGGGATGCTCCGTTTC+TGG | + | chr5.4:21326235-21326254 | None:intergenic | 45.0% |
| ACAACACCTATGTGCAGTCC+AGG | + | chr5.4:21327497-21327516 | None:intergenic | 50.0% | |
| ACACTGTGATCCCAGCACAA+AGG | + | chr5.4:21327442-21327461 | None:intergenic | 50.0% | |
| AGCAGCGGCATCAAGTGATA+AGG | + | chr5.4:21327414-21327433 | None:intergenic | 50.0% | |
| AGTTGCTGGTGAAGTGACAG+AGG | - | chr5.4:21327166-21327185 | MS.gene070868:CDS | 50.0% | |
| CCCACTCATTCTTAGCCATG+TGG | + | chr5.4:21326995-21327014 | None:intergenic | 50.0% | |
| CGGAGAGTCCAGTGCAATTT+AGG | - | chr5.4:21326620-21326639 | MS.gene070868:CDS | 50.0% | |
| GAAGTTCGCCAAAGCCTTTG+GGG | - | chr5.4:21327547-21327566 | MS.gene070868:intron | 50.0% | |
| GACAAACCTGGACTGCACAT+AGG | - | chr5.4:21327488-21327507 | MS.gene070868:CDS | 50.0% | |
| GCAGGGAGAAAGACAATTGG+TGG | - | chr5.4:21328035-21328054 | MS.gene070868:intron | 50.0% | |
| GGAAACTCCAAAGGCTTCTC+TGG | + | chr5.4:21327912-21327931 | None:intergenic | 50.0% | |
| GTGAAGTTCGCCAAAGCCTT+TGG | - | chr5.4:21327545-21327564 | MS.gene070868:intron | 50.0% | |
| TCGCGAACAAGACCAGATGA+AGG | - | chr5.4:21327652-21327671 | MS.gene070868:intron | 50.0% | |
| TCTCCCCTGTTTCCCTGAAA+AGG | + | chr5.4:21326923-21326942 | None:intergenic | 50.0% | |
| TTTCAGGGAAACAGGGGAGA+AGG | - | chr5.4:21326923-21326942 | MS.gene070868:CDS | 50.0% | |
| ! | CTTAGGAGCTGACTCATTCG+TGG | - | chr5.4:21327625-21327644 | MS.gene070868:intron | 50.0% |
| ! | GGACTGCACATAGGTGTTGT+TGG | - | chr5.4:21327497-21327516 | MS.gene070868:CDS | 50.0% |
| !! | GCTGTAATGGGCACGTTTGA+TGG | - | chr5.4:21327798-21327817 | MS.gene070868:intron | 50.0% |
| AAGCTTTCGGATGGGCAGCT+AGG | - | chr5.4:21326254-21326273 | MS.gene070868:CDS | 55.0% | |
| AGCACAAAGGAGAGGAGCAG+CGG | + | chr5.4:21327429-21327448 | None:intergenic | 55.0% | |
| AGCTTTCGGATGGGCAGCTA+GGG | - | chr5.4:21326255-21326274 | MS.gene070868:CDS | 55.0% | |
| AGTGACAGAGGTGGGAAGCA+AGG | - | chr5.4:21327178-21327197 | MS.gene070868:CDS | 55.0% | |
| ATGTCACTCGGACCTCCACA+TGG | - | chr5.4:21326977-21326996 | MS.gene070868:CDS | 55.0% | |
| CGTGAGTGATGTGCTCGTGA+AGG | + | chr5.4:21326847-21326866 | None:intergenic | 55.0% | |
| CTGCTCCTCTCCTTTGTGCT+GGG | - | chr5.4:21327429-21327448 | MS.gene070868:CDS | 55.0% | |
| GCTGGTGAAGTGACAGAGGT+GGG | - | chr5.4:21327170-21327189 | MS.gene070868:CDS | 55.0% | |
| GGAAACAGGGGAGAAGGATG+TGG | - | chr5.4:21326929-21326948 | MS.gene070868:CDS | 55.0% | |
| GTGATCCCAGCACAAAGGAG+AGG | + | chr5.4:21327437-21327456 | None:intergenic | 55.0% | |
| TGCTGGTGAAGTGACAGAGG+TGG | - | chr5.4:21327169-21327188 | MS.gene070868:CDS | 55.0% | |
| TGGAGCTCCAGAGAAGCCTT+TGG | - | chr5.4:21327902-21327921 | MS.gene070868:intron | 55.0% | |
| TGGAGGCTACTCTGACACCA+TGG | - | chr5.4:21327352-21327371 | MS.gene070868:intron | 55.0% | |
| !! | AGTTGGAGACAGGGTTGGTG+TGG | - | chr5.4:21327214-21327233 | MS.gene070868:CDS | 55.0% |
| !! | CGCCAAAGCCTTTGGGGTTA+AGG | - | chr5.4:21327553-21327572 | MS.gene070868:intron | 55.0% |
| !! | GTTGGAGACAGGGTTGGTGT+GGG | - | chr5.4:21327215-21327234 | MS.gene070868:CDS | 55.0% |
| !! | TTGGAGACAGGGTTGGTGTG+GGG | - | chr5.4:21327216-21327235 | MS.gene070868:CDS | 55.0% |
| GCTGCTCCTCTCCTTTGTGC+TGG | - | chr5.4:21327428-21327447 | MS.gene070868:CDS | 60.0% | |
| GTTGGTGTGGGGTGCATGGT+TGG | - | chr5.4:21327227-21327246 | MS.gene070868:CDS | 60.0% | |
| TGGGCAGCTAGGGACACATC+TGG | - | chr5.4:21326265-21326284 | MS.gene070868:CDS | 60.0% | |
| !! | CAGGGTTGGTGTGGGGTGCA+TGG | - | chr5.4:21327223-21327242 | MS.gene070868:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 21326220 | 21328244 | 21326220 | ID=MS.gene070868 |
| chr5.4 | mRNA | 21326220 | 21328244 | 21326220 | ID=MS.gene070868.t1;Parent=MS.gene070868 |
| chr5.4 | exon | 21328147 | 21328244 | 21328147 | ID=MS.gene070868.t1.exon1;Parent=MS.gene070868.t1 |
| chr5.4 | CDS | 21328147 | 21328244 | 21328147 | ID=cds.MS.gene070868.t1;Parent=MS.gene070868.t1 |
| chr5.4 | exon | 21327422 | 21327535 | 21327422 | ID=MS.gene070868.t1.exon2;Parent=MS.gene070868.t1 |
| chr5.4 | CDS | 21327422 | 21327535 | 21327422 | ID=cds.MS.gene070868.t1;Parent=MS.gene070868.t1 |
| chr5.4 | exon | 21326791 | 21327304 | 21326791 | ID=MS.gene070868.t1.exon3;Parent=MS.gene070868.t1 |
| chr5.4 | CDS | 21326791 | 21327304 | 21326791 | ID=cds.MS.gene070868.t1;Parent=MS.gene070868.t1 |
| chr5.4 | exon | 21326513 | 21326666 | 21326513 | ID=MS.gene070868.t1.exon4;Parent=MS.gene070868.t1 |
| chr5.4 | CDS | 21326513 | 21326666 | 21326513 | ID=cds.MS.gene070868.t1;Parent=MS.gene070868.t1 |
| chr5.4 | exon | 21326220 | 21326425 | 21326220 | ID=MS.gene070868.t1.exon5;Parent=MS.gene070868.t1 |
| chr5.4 | CDS | 21326220 | 21326425 | 21326220 | ID=cds.MS.gene070868.t1;Parent=MS.gene070868.t1 |
| Gene Sequence |
| Protein sequence |
