Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90766.t1 | XP_003628882.1 | 95.6 | 360 | 16 | 0 | 1 | 360 | 1 | 360 | 1.90E-194 | 688.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90766.t1 | Q9ZRF1 | 77.8 | 352 | 78 | 0 | 6 | 357 | 4 | 355 | 4.0e-161 | 568.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90766.t1 | G7LIJ2 | 95.6 | 360 | 16 | 0 | 1 | 360 | 1 | 360 | 1.3e-194 | 688.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90766.t1 | MTR_8g068190 | 96.389 | 360 | 13 | 0 | 1 | 360 | 1 | 360 | 0.0 | 666 |
| MS.gene90766.t1 | MTR_5g031190 | 80.278 | 360 | 71 | 0 | 1 | 360 | 1 | 360 | 0.0 | 592 |
| MS.gene90766.t1 | MTR_5g031180 | 83.611 | 360 | 59 | 0 | 1 | 360 | 1 | 360 | 0.0 | 581 |
| MS.gene90766.t1 | MTR_5g031230 | 78.611 | 360 | 77 | 0 | 1 | 360 | 1 | 360 | 0.0 | 575 |
| MS.gene90766.t1 | MTR_5g031390 | 78.889 | 360 | 76 | 0 | 1 | 360 | 1 | 360 | 0.0 | 574 |
| MS.gene90766.t1 | MTR_5g031250 | 77.778 | 360 | 80 | 0 | 1 | 360 | 1 | 360 | 0.0 | 570 |
| MS.gene90766.t1 | MTR_4g115300 | 77.222 | 360 | 82 | 0 | 1 | 360 | 1 | 360 | 0.0 | 563 |
| MS.gene90766.t1 | MTR_5g031310 | 78.249 | 354 | 77 | 0 | 7 | 360 | 8 | 361 | 0.0 | 560 |
| MS.gene90766.t1 | MTR_5g031305 | 77.401 | 354 | 80 | 0 | 7 | 360 | 8 | 361 | 0.0 | 553 |
| MS.gene90766.t1 | MTR_5g031210 | 75.833 | 360 | 87 | 0 | 1 | 360 | 1 | 360 | 0.0 | 546 |
| MS.gene90766.t1 | MTR_5g031300 | 74.576 | 354 | 90 | 0 | 7 | 360 | 8 | 361 | 0.0 | 541 |
| MS.gene90766.t1 | MTR_5g031360 | 76.638 | 351 | 82 | 0 | 10 | 360 | 12 | 362 | 0.0 | 541 |
| MS.gene90766.t1 | MTR_8g092630 | 62.745 | 357 | 127 | 2 | 8 | 359 | 60 | 415 | 1.08e-150 | 431 |
| MS.gene90766.t1 | MTR_5g031430 | 62.535 | 355 | 131 | 1 | 3 | 357 | 5 | 357 | 1.65e-149 | 426 |
| MS.gene90766.t1 | MTR_1g025950 | 59.026 | 349 | 142 | 1 | 8 | 355 | 7 | 355 | 5.70e-138 | 397 |
| MS.gene90766.t1 | MTR_5g031250 | 76.763 | 241 | 56 | 0 | 1 | 241 | 1 | 241 | 1.33e-132 | 379 |
| MS.gene90766.t1 | MTR_1g107425 | 52.770 | 343 | 162 | 0 | 11 | 353 | 9 | 351 | 9.50e-124 | 360 |
| MS.gene90766.t1 | MTR_2g009810 | 53.043 | 345 | 160 | 2 | 14 | 357 | 62 | 405 | 1.36e-115 | 342 |
| MS.gene90766.t1 | MTR_1g107425 | 54.064 | 283 | 129 | 1 | 11 | 293 | 9 | 290 | 2.87e-99 | 296 |
| MS.gene90766.t1 | MTR_2g009820 | 49.398 | 249 | 116 | 3 | 116 | 357 | 8 | 253 | 1.98e-64 | 205 |
| MS.gene90766.t1 | MTR_5g031290 | 76.316 | 114 | 27 | 0 | 247 | 360 | 80 | 193 | 2.34e-56 | 182 |
| MS.gene90766.t1 | MTR_5g031290 | 78.750 | 80 | 16 | 1 | 1 | 79 | 1 | 80 | 1.25e-38 | 136 |
| MS.gene90766.t1 | MTR_8g095220 | 28.452 | 239 | 146 | 5 | 25 | 242 | 68 | 302 | 7.58e-24 | 100 |
| MS.gene90766.t1 | MTR_8g095220 | 27.500 | 280 | 173 | 7 | 25 | 278 | 68 | 343 | 7.91e-24 | 102 |
| MS.gene90766.t1 | MTR_6g466320 | 25.497 | 302 | 201 | 8 | 1 | 290 | 6 | 295 | 3.31e-17 | 82.4 |
| MS.gene90766.t1 | MTR_6g465010 | 25.497 | 302 | 201 | 8 | 1 | 290 | 6 | 295 | 3.31e-17 | 82.4 |
| MS.gene90766.t1 | MTR_6g465010 | 26.259 | 278 | 182 | 7 | 25 | 290 | 13 | 279 | 5.67e-17 | 81.3 |
| MS.gene90766.t1 | MTR_3g089977 | 24.355 | 349 | 225 | 10 | 39 | 354 | 37 | 379 | 2.33e-16 | 80.1 |
| MS.gene90766.t1 | MTR_3g089940 | 24.484 | 339 | 218 | 9 | 39 | 344 | 37 | 370 | 4.45e-16 | 79.0 |
| MS.gene90766.t1 | MTR_3g089940 | 24.484 | 339 | 218 | 9 | 39 | 344 | 37 | 370 | 4.45e-16 | 79.0 |
| MS.gene90766.t1 | MTR_3g089940 | 24.756 | 307 | 201 | 7 | 39 | 319 | 37 | 339 | 5.81e-15 | 75.5 |
| MS.gene90766.t1 | MTR_0001s0660 | 25.166 | 302 | 202 | 10 | 38 | 318 | 35 | 333 | 6.48e-15 | 75.9 |
| MS.gene90766.t1 | MTR_3g089940 | 24.756 | 307 | 201 | 7 | 39 | 319 | 37 | 339 | 7.33e-15 | 75.1 |
| MS.gene90766.t1 | MTR_3g089970 | 23.599 | 339 | 221 | 9 | 39 | 344 | 38 | 371 | 9.06e-14 | 72.4 |
| MS.gene90766.t1 | MTR_1g069430 | 25.959 | 339 | 211 | 11 | 39 | 349 | 36 | 362 | 3.50e-13 | 70.5 |
| MS.gene90766.t1 | MTR_7g099040 | 24.843 | 318 | 204 | 9 | 38 | 327 | 37 | 347 | 8.86e-13 | 69.3 |
| MS.gene90766.t1 | MTR_5g087710 | 25.333 | 300 | 186 | 11 | 39 | 307 | 46 | 338 | 1.40e-12 | 68.6 |
| MS.gene90766.t1 | MTR_3g079180 | 26.263 | 297 | 189 | 11 | 38 | 307 | 40 | 333 | 2.84e-12 | 67.8 |
| MS.gene90766.t1 | MTR_5g031380 | 47.541 | 61 | 26 | 1 | 74 | 134 | 13 | 67 | 4.87e-12 | 62.4 |
| MS.gene90766.t1 | MTR_7g068320 | 26.814 | 317 | 184 | 11 | 39 | 318 | 48 | 353 | 2.88e-11 | 64.7 |
| MS.gene90766.t1 | MTR_3g099460 | 25.231 | 325 | 181 | 12 | 39 | 319 | 37 | 343 | 3.20e-11 | 64.3 |
| MS.gene90766.t1 | MTR_3g099460 | 25.231 | 325 | 181 | 12 | 39 | 319 | 44 | 350 | 3.30e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90766.t1 | AT4G37990 | 74.352 | 347 | 89 | 0 | 11 | 357 | 7 | 353 | 1.38e-176 | 494 |
| MS.gene90766.t1 | AT4G37980 | 72.046 | 347 | 97 | 0 | 11 | 357 | 7 | 353 | 2.49e-175 | 491 |
| MS.gene90766.t1 | AT4G37970 | 65.642 | 358 | 123 | 0 | 3 | 360 | 4 | 361 | 6.49e-175 | 491 |
| MS.gene90766.t1 | AT4G39330 | 63.128 | 358 | 132 | 0 | 1 | 358 | 1 | 358 | 8.13e-167 | 470 |
| MS.gene90766.t1 | AT2G21890 | 62.536 | 347 | 129 | 1 | 12 | 357 | 6 | 352 | 2.45e-158 | 449 |
| MS.gene90766.t1 | AT2G21730 | 62.644 | 348 | 128 | 2 | 12 | 357 | 6 | 353 | 2.99e-157 | 446 |
| MS.gene90766.t1 | AT4G37980 | 71.875 | 288 | 81 | 0 | 11 | 298 | 7 | 294 | 5.46e-138 | 394 |
| MS.gene90766.t1 | AT4G39330 | 64.026 | 303 | 109 | 0 | 1 | 303 | 1 | 303 | 7.08e-138 | 395 |
| MS.gene90766.t1 | AT4G37970 | 64.746 | 295 | 104 | 0 | 3 | 297 | 4 | 298 | 1.10e-137 | 394 |
| MS.gene90766.t1 | AT3G19450 | 52.890 | 346 | 163 | 0 | 11 | 356 | 9 | 354 | 5.71e-113 | 333 |
| MS.gene90766.t1 | AT4G37970 | 64.609 | 243 | 86 | 0 | 3 | 245 | 4 | 246 | 2.72e-111 | 325 |
| MS.gene90766.t1 | AT1G72680 | 50.291 | 344 | 166 | 2 | 16 | 357 | 14 | 354 | 4.73e-111 | 328 |
| MS.gene90766.t1 | AT4G37970 | 65.000 | 240 | 84 | 0 | 3 | 242 | 4 | 243 | 3.38e-110 | 322 |
| MS.gene90766.t1 | AT4G34230 | 52.161 | 347 | 166 | 0 | 7 | 353 | 4 | 350 | 1.80e-105 | 314 |
| MS.gene90766.t1 | AT4G34230 | 51.873 | 347 | 167 | 0 | 7 | 353 | 4 | 350 | 1.63e-104 | 311 |
| MS.gene90766.t1 | AT5G63620 | 27.857 | 280 | 172 | 9 | 25 | 278 | 70 | 345 | 5.24e-23 | 99.8 |
| MS.gene90766.t1 | AT5G63620 | 27.857 | 280 | 172 | 9 | 25 | 278 | 70 | 345 | 5.55e-23 | 99.8 |
| MS.gene90766.t1 | AT5G63620 | 29.237 | 236 | 142 | 7 | 28 | 242 | 73 | 304 | 2.47e-22 | 96.3 |
| MS.gene90766.t1 | AT1G22430 | 27.554 | 323 | 194 | 11 | 39 | 329 | 42 | 356 | 2.79e-18 | 85.9 |
| MS.gene90766.t1 | AT1G22430 | 27.554 | 323 | 194 | 11 | 39 | 329 | 42 | 356 | 2.79e-18 | 85.9 |
| MS.gene90766.t1 | AT5G51970 | 26.966 | 267 | 174 | 6 | 36 | 290 | 40 | 297 | 5.86e-18 | 84.7 |
| MS.gene90766.t1 | AT5G51970 | 26.966 | 267 | 174 | 6 | 36 | 290 | 40 | 297 | 5.86e-18 | 84.7 |
| MS.gene90766.t1 | AT1G64710 | 26.299 | 308 | 196 | 10 | 39 | 318 | 13 | 317 | 9.60e-17 | 80.9 |
| MS.gene90766.t1 | AT1G64710 | 26.557 | 305 | 193 | 10 | 39 | 315 | 36 | 337 | 1.33e-16 | 80.9 |
| MS.gene90766.t1 | AT1G32780 | 26.235 | 324 | 183 | 10 | 39 | 318 | 37 | 348 | 3.26e-16 | 79.7 |
| MS.gene90766.t1 | AT5G43940 | 26.647 | 334 | 208 | 11 | 39 | 343 | 36 | 361 | 8.18e-16 | 78.6 |
| MS.gene90766.t1 | AT5G43940 | 26.126 | 333 | 211 | 10 | 39 | 343 | 48 | 373 | 9.62e-16 | 78.2 |
| MS.gene90766.t1 | AT4G22110 | 26.036 | 338 | 208 | 13 | 39 | 343 | 43 | 371 | 5.34e-15 | 75.9 |
| MS.gene90766.t1 | AT4G22110 | 26.036 | 338 | 208 | 13 | 39 | 343 | 43 | 371 | 5.34e-15 | 75.9 |
| MS.gene90766.t1 | AT1G22430 | 28.431 | 204 | 117 | 7 | 39 | 219 | 42 | 239 | 3.69e-13 | 69.7 |
| MS.gene90766.t1 | AT1G22430 | 28.431 | 204 | 117 | 7 | 39 | 219 | 42 | 239 | 6.26e-13 | 68.9 |
| MS.gene90766.t1 | AT1G22430 | 28.431 | 204 | 117 | 7 | 39 | 219 | 42 | 239 | 6.26e-13 | 68.9 |
| MS.gene90766.t1 | AT1G77120 | 23.121 | 346 | 233 | 11 | 39 | 354 | 36 | 378 | 1.80e-12 | 68.2 |
| MS.gene90766.t1 | AT5G42250 | 23.647 | 351 | 228 | 14 | 39 | 354 | 45 | 390 | 2.91e-12 | 67.8 |
Find 91 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGCCCTTTGAAATATTT+TGG | 0.088605 | 8.1:-36736158 | MS.gene90766:CDS |
| TGCCAATCCAAAAGCCTTTC+TGG | 0.129169 | 8.1:+36738804 | None:intergenic |
| TATCGATTTGTTATTGATAT+TGG | 0.153239 | 8.1:-36735023 | MS.gene90766:CDS |
| GCTGAAACAACTTCAATTTC+AGG | 0.167472 | 8.1:+36735095 | None:intergenic |
| ACCAGTATTTCCTTTACTTA+TGG | 0.193639 | 8.1:-36735433 | MS.gene90766:CDS |
| AAGGAAGCTATTGAACTTCT+TGG | 0.242501 | 8.1:-36736011 | MS.gene90766:CDS |
| GATAAACCCAACTTGCAATT+AGG | 0.255697 | 8.1:-36736131 | MS.gene90766:CDS |
| ATCGATTTGTTATTGATATT+GGG | 0.266248 | 8.1:-36735022 | MS.gene90766:CDS |
| CCAGTATTTCCTTTACTTAT+GGG | 0.270076 | 8.1:-36735432 | MS.gene90766:intron |
| GTGAAATTTGCTAAAGCTTT+TGG | 0.271062 | 8.1:-36736074 | MS.gene90766:CDS |
| CATCCTCTGTTACCTTTGAT+TGG | 0.290815 | 8.1:-36735516 | MS.gene90766:CDS |
| TCTTGGTGGACTTGGTCATA+TGG | 0.309264 | 8.1:-36736099 | MS.gene90766:CDS |
| GAGCATCCCAGAAAGGCTTT+TGG | 0.318869 | 8.1:-36738811 | MS.gene90766:CDS |
| ATAATAGGAGGGAGTTTGAT+TGG | 0.322170 | 8.1:-36735173 | MS.gene90766:CDS |
| GTGGTTGGTCTTGGTGGACT+TGG | 0.333076 | 8.1:-36736107 | MS.gene90766:CDS |
| CAATTAGGTGTGGTTGGTCT+TGG | 0.351500 | 8.1:-36736116 | MS.gene90766:CDS |
| CCCATAAGTAAAGGAAATAC+TGG | 0.359854 | 8.1:+36735432 | None:intergenic |
| TCATGTACATGCAGGGAAAC+TGG | 0.360123 | 8.1:-36738195 | MS.gene90766:intron |
| GATAGTGCCATCGAGATTCT+TGG | 0.367052 | 8.1:+36736295 | None:intergenic |
| CAGCTCCTCTCCTCTGCGCC+GGG | 0.383707 | 8.1:-36736190 | MS.gene90766:CDS |
| GCATCAAGAGGTAGGCCATT+TGG | 0.389427 | 8.1:+36736215 | None:intergenic |
| TTTGTAGGGAGAAAGATAAT+AGG | 0.392960 | 8.1:-36735188 | MS.gene90766:intron |
| TTTCTGGGATGCTCCAACTC+TGG | 0.395683 | 8.1:+36738820 | None:intergenic |
| CTTTCTATTTAGGCTGCAAC+AGG | 0.398392 | 8.1:-36735576 | MS.gene90766:intron |
| ACCACACCTAATTGCAAGTT+GGG | 0.399467 | 8.1:+36736125 | None:intergenic |
| TCAGTTTACCCCGTAGTGCC+TGG | 0.403783 | 8.1:-36738090 | MS.gene90766:CDS |
| TTCAGGTTTCACGTCGTGTT+TGG | 0.404812 | 8.1:+36735112 | None:intergenic |
| GCAGCTCCTCTCCTCTGCGC+CGG | 0.408742 | 8.1:-36736191 | MS.gene90766:CDS |
| ATCTCATGGAAAACTTGTTA+TGG | 0.410782 | 8.1:-36735484 | MS.gene90766:CDS |
| TTAGGTGTGGTTGGTCTTGG+TGG | 0.411892 | 8.1:-36736113 | MS.gene90766:CDS |
| GGAAATACTGGTAGCTCTAA+AGG | 0.416356 | 8.1:+36735444 | None:intergenic |
| GCAACTTTGGCATGAGTGGC+AGG | 0.428464 | 8.1:+36736367 | None:intergenic |
| GAGTTTGATTGGAGGAATCA+AGG | 0.431669 | 8.1:-36735162 | MS.gene90766:CDS |
| CTCGATGGCACTATCACATA+TGG | 0.432086 | 8.1:-36736287 | MS.gene90766:CDS |
| GGTAGCTCTAAAGGCTTCTC+AGG | 0.438289 | 8.1:+36735453 | None:intergenic |
| TTCACATGTTGAAGAATGAA+TGG | 0.438459 | 8.1:-36738119 | MS.gene90766:CDS |
| AATGGCAATTTCACCAGAGT+TGG | 0.450828 | 8.1:-36738833 | MS.gene90766:CDS |
| GCCAATCCAAAAGCCTTTCT+GGG | 0.455038 | 8.1:+36738805 | None:intergenic |
| CTTTGCAACTTTGGCATGAG+TGG | 0.466853 | 8.1:+36736363 | None:intergenic |
| CAAGCCCAAAATATTTCAAA+GGG | 0.475361 | 8.1:+36736153 | None:intergenic |
| ATAACATACCCAGGCACTAC+GGG | 0.480514 | 8.1:+36738081 | None:intergenic |
| TCACATGTTGAAGAATGAAT+GGG | 0.480850 | 8.1:-36738118 | MS.gene90766:CDS |
| GTAGGGAGAAAGATAATAGG+AGG | 0.481996 | 8.1:-36735185 | MS.gene90766:intron |
| AACTCTGGTGAAATTGCCAT+TGG | 0.485026 | 8.1:+36738835 | None:intergenic |
| TCAAGCCCAAAATATTTCAA+AGG | 0.485606 | 8.1:+36736152 | None:intergenic |
| TTACCTTCTTGAGAAGTTGA+AGG | 0.488313 | 8.1:+36738753 | None:intergenic |
| CAATCAAAGGTAACAGAGGA+TGG | 0.496790 | 8.1:+36735517 | None:intergenic |
| CAAGGTAGGTGTTGGGTGCA+TGG | 0.501965 | 8.1:-36736396 | MS.gene90766:CDS |
| TTGGCAGCTAGGGACTCATC+TGG | 0.512691 | 8.1:-36738787 | MS.gene90766:CDS |
| GTTGGAGACAAGGTAGGTGT+TGG | 0.517373 | 8.1:-36736404 | MS.gene90766:CDS |
| AACTTGCAATTAGGTGTGGT+TGG | 0.521760 | 8.1:-36736122 | MS.gene90766:CDS |
| ATAGGAGGGAGTTTGATTGG+AGG | 0.523692 | 8.1:-36735170 | MS.gene90766:CDS |
| AACCACACCTAATTGCAAGT+TGG | 0.524415 | 8.1:+36736124 | None:intergenic |
| CAGTTTACCCCGTAGTGCCT+GGG | 0.533828 | 8.1:-36738089 | MS.gene90766:intron |
| AGGGCTATACACTGTGATCC+CGG | 0.534794 | 8.1:+36736172 | None:intergenic |
| CTCCCTTCAACTTCTCAAGA+AGG | 0.539989 | 8.1:-36738756 | MS.gene90766:intron |
| TACCTTCTTGAGAAGTTGAA+GGG | 0.540236 | 8.1:+36738754 | None:intergenic |
| GCTGCAACAGGCACCTTGGA+TGG | 0.540522 | 8.1:-36735564 | MS.gene90766:CDS |
| TAGGGAGAAAGATAATAGGA+GGG | 0.544083 | 8.1:-36735184 | MS.gene90766:CDS |
| TTAGGCTGCAACAGGCACCT+TGG | 0.546046 | 8.1:-36735568 | MS.gene90766:intron |
| TTGGAGACAAGGTAGGTGTT+GGG | 0.547159 | 8.1:-36736403 | MS.gene90766:CDS |
| TGATTATGTCAACACTGCGT+TGG | 0.557331 | 8.1:-36735072 | MS.gene90766:CDS |
| TTTGTGATCAGCATTCCAAA+TGG | 0.562040 | 8.1:-36736230 | MS.gene90766:CDS |
| ATGTGCTTACCCATAAGTAA+AGG | 0.562578 | 8.1:+36735423 | None:intergenic |
| CATGGAAAACTTGTTATGGT+TGG | 0.563073 | 8.1:-36735480 | MS.gene90766:CDS |
| GTGATCCCGGCGCAGAGGAG+AGG | 0.564629 | 8.1:+36736185 | None:intergenic |
| CACTGAACAAGATCAAATGC+AGG | 0.568812 | 8.1:-36735967 | MS.gene90766:intron |
| AATAACATACCCAGGCACTA+CGG | 0.581739 | 8.1:+36738080 | None:intergenic |
| TTCGTCGGCGACCATTGTGT+CGG | 0.587730 | 8.1:+36736256 | None:intergenic |
| GAGCTGCAGCATCAAGAGGT+AGG | 0.588338 | 8.1:+36736207 | None:intergenic |
| AGAGTTGGAGCATCCCAGAA+AGG | 0.605159 | 8.1:-36738818 | MS.gene90766:CDS |
| ACCCAACTTGCAATTAGGTG+TGG | 0.608390 | 8.1:-36736126 | MS.gene90766:CDS |
| AGAGGAGCTGCAGCATCAAG+AGG | 0.616495 | 8.1:+36736203 | None:intergenic |
| AAATGTAGGCATGAGATCGT+AGG | 0.620757 | 8.1:-36736467 | MS.gene90766:intron |
| CAAAGGTAACAGAGGATGGG+TGG | 0.628958 | 8.1:+36735521 | None:intergenic |
| AATCAAAGGTAACAGAGGAT+GGG | 0.635351 | 8.1:+36735518 | None:intergenic |
| TTCAAAGTTGGAGACAAGGT+AGG | 0.645124 | 8.1:-36736410 | MS.gene90766:CDS |
| GCTGATCACAAAGCTTTCGT+CGG | 0.648568 | 8.1:+36736241 | None:intergenic |
| TATGGTTCCAAGAATCTCGA+TGG | 0.649559 | 8.1:-36736302 | MS.gene90766:CDS |
| GTAGGCGAAGTAACAGAGGT+AGG | 0.651976 | 8.1:-36736449 | MS.gene90766:CDS |
| AGACCAATCAAAGGTAACAG+AGG | 0.653521 | 8.1:+36735513 | None:intergenic |
| GATCGTAGGCGAAGTAACAG+AGG | 0.654571 | 8.1:-36736453 | MS.gene90766:CDS |
| ACACTGTGATCCCGGCGCAG+AGG | 0.659032 | 8.1:+36736180 | None:intergenic |
| AAAATTCAAAGTTGGAGACA+AGG | 0.659045 | 8.1:-36736414 | MS.gene90766:CDS |
| AGTAACAGAGGTAGGAAACA+AGG | 0.663457 | 8.1:-36736441 | MS.gene90766:CDS |
| TGTGTCAATGATGCCATCCA+AGG | 0.670735 | 8.1:+36735551 | None:intergenic |
| CACATGTTGAAGAATGAATG+GGG | 0.671149 | 8.1:-36738117 | MS.gene90766:CDS |
| GATTTCAAAAGACCAATCAA+AGG | 0.671523 | 8.1:+36735504 | None:intergenic |
| TGGAGGCTACTCCGACACAA+TGG | 0.673566 | 8.1:-36736267 | MS.gene90766:CDS |
| GATGGCACTATCACATATGG+AGG | 0.689407 | 8.1:-36736284 | MS.gene90766:CDS |
| TAACATACCCAGGCACTACG+GGG | 0.727459 | 8.1:+36738082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTTCAAAAAAATATTA+AGG | - | chr8.1:36736088-36736107 | MS.gene90766:CDS | 10.0% |
| !! | ATAGATATTAGTAATAAAAA+AGG | - | chr8.1:36736638-36736657 | MS.gene90766:intron | 10.0% |
| !! | ATGTTTCAAAAAAATATTAA+GGG | - | chr8.1:36736089-36736108 | MS.gene90766:CDS | 10.0% |
| !! | TAAATGAATAAATAAATACA+TGG | + | chr8.1:36738195-36738214 | None:intergenic | 10.0% |
| !! | TAGATATTAGTAATAAAAAA+GGG | - | chr8.1:36736639-36736658 | MS.gene90766:intron | 10.0% |
| !! | TTTAATAAATTAATATGTAG+TGG | - | chr8.1:36736757-36736776 | MS.gene90766:intron | 10.0% |
| !!! | TAGATTTTGTTTAATTTTTA+GGG | - | chr8.1:36738100-36738119 | MS.gene90766:CDS | 10.0% |
| !! | ACAAAAAAAAACTAATTTAG+TGG | - | chr8.1:36737051-36737070 | MS.gene90766:intron | 15.0% |
| !! | AGATATTAGTAATAAAAAAG+GGG | - | chr8.1:36736640-36736659 | MS.gene90766:intron | 15.0% |
| !! | CAAAAAAAAACTAATTTAGT+GGG | - | chr8.1:36737052-36737071 | MS.gene90766:intron | 15.0% |
| !! | GAGTCTATTAATTTAATATT+TGG | - | chr8.1:36735530-36735549 | MS.gene90766:CDS | 15.0% |
| !! | TAAAATAAAAAATGGAGAAA+TGG | + | chr8.1:36735106-36735125 | None:intergenic | 15.0% |
| !! | TCTATTAATTTAATATTTGG+AGG | - | chr8.1:36735533-36735552 | MS.gene90766:CDS | 15.0% |
| !!! | AAAAATATTAAGGGTATTTT+TGG | - | chr8.1:36736098-36736117 | MS.gene90766:CDS | 15.0% |
| !!! | ATCAATTTTTGTTTTCTTTT+TGG | - | chr8.1:36737939-36737958 | MS.gene90766:intron | 15.0% |
| !!! | CATTAACTTTTTAGTTTTTT+TGG | + | chr8.1:36735335-36735354 | None:intergenic | 15.0% |
| !!! | CTAGATTTTGTTTAATTTTT+AGG | - | chr8.1:36738099-36738118 | MS.gene90766:CDS | 15.0% |
| !!! | TCCATTTTTTATTTTAGTTA+GGG | - | chr8.1:36735110-36735129 | MS.gene90766:CDS | 15.0% |
| !!! | TGTACTTTTTATAAAATATG+TGG | + | chr8.1:36738447-36738466 | None:intergenic | 15.0% |
| !!! | TTACCATAATTTTGTTTTTT+TGG | - | chr8.1:36736251-36736270 | MS.gene90766:CDS | 15.0% |
| !!! | TTTAATTTTTTAGTATCTAG+AGG | + | chr8.1:36738144-36738163 | None:intergenic | 15.0% |
| !! | AAAAAACAAACTTTACATGA+AGG | - | chr8.1:36738166-36738185 | MS.gene90766:CDS | 20.0% |
| !! | ACCCTAACTAAAATAAAAAA+TGG | + | chr8.1:36735114-36735133 | None:intergenic | 20.0% |
| !! | TAATTTGAGCAAAAAAATGT+AGG | - | chr8.1:36737352-36737371 | MS.gene90766:intron | 20.0% |
| !! | TCTCCAAAAAAACAAAATTA+TGG | + | chr8.1:36736257-36736276 | None:intergenic | 20.0% |
| !! | TTGCATATTCAACAAAATTA+TGG | + | chr8.1:36736289-36736308 | None:intergenic | 20.0% |
| !!! | AATATGTTGTTTTGTTTGTA+GGG | - | chr8.1:36738631-36738650 | MS.gene90766:intron | 20.0% |
| !!! | AATCCAAAAAATTTGATTTG+TGG | - | chr8.1:36736835-36736854 | MS.gene90766:intron | 20.0% |
| !!! | AATTGATTTCAAACTCAAAA+TGG | + | chr8.1:36735829-36735848 | None:intergenic | 20.0% |
| !!! | ATCGATTTGTTATTGATATT+GGG | - | chr8.1:36738811-36738830 | MS.gene90766:CDS | 20.0% |
| !!! | ATTTTAGTTAGGGTTTATTT+TGG | - | chr8.1:36735120-36735139 | MS.gene90766:CDS | 20.0% |
| !!! | CATATTCTATTATTGTTTTC+TGG | - | chr8.1:36735801-36735820 | MS.gene90766:intron | 20.0% |
| !!! | CTCCATTTTTTATTTTAGTT+AGG | - | chr8.1:36735109-36735128 | MS.gene90766:CDS | 20.0% |
| !!! | TATCGATTTGTTATTGATAT+TGG | - | chr8.1:36738810-36738829 | MS.gene90766:CDS | 20.0% |
| !!! | TTGAAAATTTGAAGATCTTT+TGG | - | chr8.1:36735477-36735496 | MS.gene90766:CDS | 20.0% |
| !!! | TTTTAGTTAGGGTTTATTTT+GGG | - | chr8.1:36735121-36735140 | MS.gene90766:CDS | 20.0% |
| ! | AAATTAATATGTAGTGGTGT+CGG | - | chr8.1:36736763-36736782 | MS.gene90766:intron | 25.0% |
| ! | AAGGTACAAAAATTCAAAGT+TGG | - | chr8.1:36737411-36737430 | MS.gene90766:intron | 25.0% |
| ! | AATGTGCTAAAATTTGATAG+CGG | - | chr8.1:36735952-36735971 | MS.gene90766:intron | 25.0% |
| ! | CTGTTTAAAAGTAGATCATT+AGG | + | chr8.1:36735872-36735891 | None:intergenic | 25.0% |
| ! | GTTCTATGTCTTTACATTAA+CGG | - | chr8.1:36736787-36736806 | MS.gene90766:intron | 25.0% |
| ! | TGAAAATAACTCAATGTCAA+TGG | + | chr8.1:36735924-36735943 | None:intergenic | 25.0% |
| ! | TGAGACATTATAAATGTGTT+TGG | + | chr8.1:36738235-36738254 | None:intergenic | 25.0% |
| ! | TTATCCTATTCTTATTGAGA+AGG | - | chr8.1:36737968-36737987 | MS.gene90766:intron | 25.0% |
| !!! | AGTATATTTTTTTCAGTGCA+CGG | - | chr8.1:36736874-36736893 | MS.gene90766:intron | 25.0% |
| !!! | ATAGCCCTTTGAAATATTTT+GGG | - | chr8.1:36737676-36737695 | MS.gene90766:intron | 25.0% |
| !!! | ATTGTACATGATAACTTGTT+AGG | - | chr8.1:36735557-36735576 | MS.gene90766:CDS | 25.0% |
| !!! | CAATATGTTGTTTTGTTTGT+AGG | - | chr8.1:36738630-36738649 | MS.gene90766:intron | 25.0% |
| !!! | GTGTAGTTTTTGGAAAATTA+TGG | + | chr8.1:36738528-36738547 | None:intergenic | 25.0% |
| !!! | TATAGCCCTTTGAAATATTT+TGG | - | chr8.1:36737675-36737694 | MS.gene90766:intron | 25.0% |
| !!! | TTAGCTTTTTTGTTAGTACA+TGG | - | chr8.1:36736693-36736712 | MS.gene90766:intron | 25.0% |
| AAAATTCAAAGTTGGAGACA+AGG | - | chr8.1:36737419-36737438 | MS.gene90766:intron | 30.0% | |
| AAATTGAATCATGTACATGC+AGG | - | chr8.1:36735630-36735649 | MS.gene90766:intron | 30.0% | |
| AACATAACAATAACATACCC+AGG | + | chr8.1:36735764-36735783 | None:intergenic | 30.0% | |
| AATTGAATCATGTACATGCA+GGG | - | chr8.1:36735631-36735650 | MS.gene90766:intron | 30.0% | |
| ACCAGTATTTCCTTTACTTA+TGG | - | chr8.1:36738400-36738419 | MS.gene90766:intron | 30.0% | |
| ACGAGAAATAATGATCAACA+AGG | - | chr8.1:36736611-36736630 | MS.gene90766:intron | 30.0% | |
| ACTCAACTGACAATATTGTT+AGG | + | chr8.1:36737023-36737042 | None:intergenic | 30.0% | |
| ATCTATTTGCAAGACATTGA+GGG | + | chr8.1:36737156-36737175 | None:intergenic | 30.0% | |
| ATGTCTCATCCTTTCTATTT+AGG | - | chr8.1:36738247-36738266 | MS.gene90766:intron | 30.0% | |
| CAAGCCCAAAATATTTCAAA+GGG | + | chr8.1:36737683-36737702 | None:intergenic | 30.0% | |
| CAATATTGTCAGTTGAGTTA+AGG | - | chr8.1:36737025-36737044 | MS.gene90766:intron | 30.0% | |
| CCAAAAATGATTCTCACATA+TGG | - | chr8.1:36737513-36737532 | MS.gene90766:intron | 30.0% | |
| CCAGTATTTCCTTTACTTAT+GGG | - | chr8.1:36738401-36738420 | MS.gene90766:intron | 30.0% | |
| CGAGAAATAATGATCAACAA+GGG | - | chr8.1:36736612-36736631 | MS.gene90766:intron | 30.0% | |
| GACAAAACTTACACATACTA+CGG | - | chr8.1:36735211-36735230 | MS.gene90766:intron | 30.0% | |
| GAGAAATAATGATCAACAAG+GGG | - | chr8.1:36736613-36736632 | MS.gene90766:intron | 30.0% | |
| GATTTCAAAAGACCAATCAA+AGG | + | chr8.1:36738332-36738351 | None:intergenic | 30.0% | |
| GGGGTTATAGATATTAAAGT+CGG | - | chr8.1:36736659-36736678 | MS.gene90766:intron | 30.0% | |
| GGGTTATAGATATTAAAGTC+GGG | - | chr8.1:36736660-36736679 | MS.gene90766:intron | 30.0% | |
| GTCATTACTGCTTATTGTAA+GGG | + | chr8.1:36735194-36735213 | None:intergenic | 30.0% | |
| TAAGGGAAAAAAAAAGAGCA+TGG | + | chr8.1:36735177-36735196 | None:intergenic | 30.0% | |
| TAATTGAAATCACTCGAGTT+CGG | - | chr8.1:36738038-36738057 | MS.gene90766:intron | 30.0% | |
| TAATTTCTCCCAAAGTCATA+TGG | - | chr8.1:36736313-36736332 | MS.gene90766:CDS | 30.0% | |
| TCAAGCCCAAAATATTTCAA+AGG | + | chr8.1:36737684-36737703 | None:intergenic | 30.0% | |
| TCACATGTTGAAGAATGAAT+GGG | - | chr8.1:36735715-36735734 | MS.gene90766:intron | 30.0% | |
| TGCCAATGCAAAAATTAAGT+GGG | - | chr8.1:36737122-36737141 | MS.gene90766:intron | 30.0% | |
| TGTCATTACTGCTTATTGTA+AGG | + | chr8.1:36735195-36735214 | None:intergenic | 30.0% | |
| TTACGGTATACAATTTGTGT+CGG | - | chr8.1:36736375-36736394 | MS.gene90766:CDS | 30.0% | |
| TTCACATGTTGAAGAATGAA+TGG | - | chr8.1:36735714-36735733 | MS.gene90766:intron | 30.0% | |
| TTTGTAGGGAGAAAGATAAT+AGG | - | chr8.1:36738645-36738664 | MS.gene90766:intron | 30.0% | |
| ! | CAACTGATTCAGTATATGTT+TGG | + | chr8.1:36738595-36738614 | None:intergenic | 30.0% |
| ! | CATGGTTCTATACAACTATA+AGG | + | chr8.1:36735289-36735308 | None:intergenic | 30.0% |
| ! | CCATATGTGAGAATCATTTT+TGG | + | chr8.1:36737516-36737535 | None:intergenic | 30.0% |
| ! | TTCAATAGCTTCCTTCTTTT+TGG | + | chr8.1:36737817-36737836 | None:intergenic | 30.0% |
| ! | TTGATCAAGCGTTCAAATTT+TGG | + | chr8.1:36738006-36738025 | None:intergenic | 30.0% |
| !! | AGTTTTTGGAAAATTATGGC+AGG | + | chr8.1:36738524-36738543 | None:intergenic | 30.0% |
| !! | ATCTCATGGAAAACTTGTTA+TGG | - | chr8.1:36738349-36738368 | MS.gene90766:intron | 30.0% |
| !! | GTTTAATTTTTAGGGAACTC+AGG | - | chr8.1:36738108-36738127 | MS.gene90766:CDS | 30.0% |
| !! | TTGAAGATCTTTTGGAAGAA+GGG | - | chr8.1:36735485-36735504 | MS.gene90766:CDS | 30.0% |
| !! | TTTGAAGATCTTTTGGAAGA+AGG | - | chr8.1:36735484-36735503 | MS.gene90766:CDS | 30.0% |
| !!! | AGATTCAAAGTGCTATTTTG+TGG | - | chr8.1:36735674-36735693 | MS.gene90766:intron | 30.0% |
| !!! | ATTGGTCTTTTGAAATCTCA+TGG | - | chr8.1:36738335-36738354 | MS.gene90766:intron | 30.0% |
| !!! | GCACCACAAATCAAATTTTT+TGG | + | chr8.1:36736841-36736860 | None:intergenic | 30.0% |
| !!! | GTATATTTTTTTCAGTGCAC+GGG | - | chr8.1:36736875-36736894 | MS.gene90766:intron | 30.0% |
| !!! | GTGAAATTTGCTAAAGCTTT+TGG | - | chr8.1:36737759-36737778 | MS.gene90766:intron | 30.0% |
| AAGGAAGCTATTGAACTTCT+TGG | - | chr8.1:36737822-36737841 | MS.gene90766:intron | 35.0% | |
| AATCAAAGGTAACAGAGGAT+GGG | + | chr8.1:36738318-36738337 | None:intergenic | 35.0% | |
| ATAATAGGAGGGAGTTTGAT+TGG | - | chr8.1:36738660-36738679 | MS.gene90766:intron | 35.0% | |
| ATGTGCTTACCCATAAGTAA+AGG | + | chr8.1:36738413-36738432 | None:intergenic | 35.0% | |
| CACATGTTGAAGAATGAATG+GGG | - | chr8.1:36735716-36735735 | MS.gene90766:intron | 35.0% | |
| CCAATGCAAAAATTAAGTGG+GGG | - | chr8.1:36737124-36737143 | MS.gene90766:intron | 35.0% | |
| CCCATAAGTAAAGGAAATAC+TGG | + | chr8.1:36738404-36738423 | None:intergenic | 35.0% | |
| CGTTCCTTCTCAATAAGAAT+AGG | + | chr8.1:36737975-36737994 | None:intergenic | 35.0% | |
| CTGCCAATGCAAAAATTAAG+TGG | - | chr8.1:36737121-36737140 | MS.gene90766:intron | 35.0% | |
| CTTGTCATTGAACCTATGTT+TGG | - | chr8.1:36738467-36738486 | MS.gene90766:intron | 35.0% | |
| GATAAACCCAACTTGCAATT+AGG | - | chr8.1:36737702-36737721 | MS.gene90766:intron | 35.0% | |
| GATCTATTTGCAAGACATTG+AGG | + | chr8.1:36737157-36737176 | None:intergenic | 35.0% | |
| GCCAATGCAAAAATTAAGTG+GGG | - | chr8.1:36737123-36737142 | MS.gene90766:intron | 35.0% | |
| GCTGAAACAACTTCAATTTC+AGG | + | chr8.1:36738741-36738760 | None:intergenic | 35.0% | |
| GTATATGTTTGGTATCACAC+TGG | + | chr8.1:36738584-36738603 | None:intergenic | 35.0% | |
| GTCTTAGACTCTTATGACAT+TGG | - | chr8.1:36736399-36736418 | MS.gene90766:CDS | 35.0% | |
| TAAACGAGCCTATAGAAAAC+AGG | + | chr8.1:36737274-36737293 | None:intergenic | 35.0% | |
| TACCTTCTTGAGAAGTTGAA+GGG | + | chr8.1:36735082-36735101 | None:intergenic | 35.0% | |
| TAGGGAGAAAGATAATAGGA+GGG | - | chr8.1:36738649-36738668 | MS.gene90766:intron | 35.0% | |
| TATTGTCAGTTGAGTTAAGG+TGG | - | chr8.1:36737028-36737047 | MS.gene90766:intron | 35.0% | |
| TCTCATAGTTAGAGATGACA+TGG | + | chr8.1:36735307-36735326 | None:intergenic | 35.0% | |
| TTACCTTCTTGAGAAGTTGA+AGG | + | chr8.1:36735083-36735102 | None:intergenic | 35.0% | |
| TTTGAACGCTTGATCAATCA+AGG | - | chr8.1:36738009-36738028 | MS.gene90766:intron | 35.0% | |
| TTTGTGATCAGCATTCCAAA+TGG | - | chr8.1:36737603-36737622 | MS.gene90766:intron | 35.0% | |
| ! | CGAGATTTTCTTTGCAACTT+TGG | + | chr8.1:36737482-36737501 | None:intergenic | 35.0% |
| ! | CTGCTACAAAGTGTAGTTTT+TGG | + | chr8.1:36738538-36738557 | None:intergenic | 35.0% |
| ! | TGGTGGATATGTTAGAATCA+CGG | - | chr8.1:36738495-36738514 | MS.gene90766:intron | 35.0% |
| ! | TTGAGTGTCCTGTTTTCTAT+AGG | - | chr8.1:36737263-36737282 | MS.gene90766:intron | 35.0% |
| ! | TTTTCTATAGGCTCGTTTAG+TGG | - | chr8.1:36737275-36737294 | MS.gene90766:intron | 35.0% |
| !! | ATAGCTTCCTTCTTTTTGGT+TGG | + | chr8.1:36737813-36737832 | None:intergenic | 35.0% |
| !! | CATGGAAAACTTGTTATGGT+TGG | - | chr8.1:36738353-36738372 | MS.gene90766:intron | 35.0% |
| !! | GTCAAACACGTCTTATTTGA+GGG | + | chr8.1:36736521-36736540 | None:intergenic | 35.0% |
| !! | GTCTTATTTGAGGGTTACAT+AGG | + | chr8.1:36736512-36736531 | None:intergenic | 35.0% |
| !! | TGAACCTATGTTTGGTGTAA+TGG | - | chr8.1:36738475-36738494 | MS.gene90766:intron | 35.0% |
| !! | TGTCAAACACGTCTTATTTG+AGG | + | chr8.1:36736522-36736541 | None:intergenic | 35.0% |
| AAATGTAGGCATGAGATCGT+AGG | - | chr8.1:36737366-36737385 | MS.gene90766:intron | 40.0% | |
| AACCACACCTAATTGCAAGT+TGG | + | chr8.1:36737712-36737731 | None:intergenic | 40.0% | |
| AACTTGCAATTAGGTGTGGT+TGG | - | chr8.1:36737711-36737730 | MS.gene90766:intron | 40.0% | |
| AATAACATACCCAGGCACTA+CGG | + | chr8.1:36735756-36735775 | None:intergenic | 40.0% | |
| ACCACACCTAATTGCAAGTT+GGG | + | chr8.1:36737711-36737730 | None:intergenic | 40.0% | |
| ACTAACATGAACCAGGGAAT+AGG | + | chr8.1:36737184-36737203 | None:intergenic | 40.0% | |
| AGACCAATCAAAGGTAACAG+AGG | + | chr8.1:36738323-36738342 | None:intergenic | 40.0% | |
| AGTAACAGAGGTAGGAAACA+AGG | - | chr8.1:36737392-36737411 | MS.gene90766:intron | 40.0% | |
| ATACGACACTAACATGAACC+AGG | + | chr8.1:36737191-36737210 | None:intergenic | 40.0% | |
| CAATCAAAGGTAACAGAGGA+TGG | + | chr8.1:36738319-36738338 | None:intergenic | 40.0% | |
| CACATACTACGGAAGTAAAG+TGG | - | chr8.1:36735222-36735241 | MS.gene90766:intron | 40.0% | |
| CACTGAACAAGATCAAATGC+AGG | - | chr8.1:36737866-36737885 | MS.gene90766:intron | 40.0% | |
| CACTTCTCCAACCAAAAAGA+AGG | - | chr8.1:36737803-36737822 | MS.gene90766:intron | 40.0% | |
| CATCCTCTGTTACCTTTGAT+TGG | - | chr8.1:36738317-36738336 | MS.gene90766:intron | 40.0% | |
| CTAACATGAACCAGGGAATA+GGG | + | chr8.1:36737183-36737202 | None:intergenic | 40.0% | |
| CTGTTGCAGCCTAAATAGAA+AGG | + | chr8.1:36738259-36738278 | None:intergenic | 40.0% | |
| CTTTCTATTTAGGCTGCAAC+AGG | - | chr8.1:36738257-36738276 | MS.gene90766:intron | 40.0% | |
| GACACTCCTTAATCAGTGTT+CGG | - | chr8.1:36736484-36736503 | MS.gene90766:intron | 40.0% | |
| GAGTTTGATTGGAGGAATCA+AGG | - | chr8.1:36738671-36738690 | MS.gene90766:intron | 40.0% | |
| GTAGGGAGAAAGATAATAGG+AGG | - | chr8.1:36738648-36738667 | MS.gene90766:intron | 40.0% | |
| GTGAACCACCATATGACTTT+GGG | + | chr8.1:36736324-36736343 | None:intergenic | 40.0% | |
| TACGACACTAACATGAACCA+GGG | + | chr8.1:36737190-36737209 | None:intergenic | 40.0% | |
| TATGGTTCCAAGAATCTCGA+TGG | - | chr8.1:36737531-36737550 | MS.gene90766:intron | 40.0% | |
| TCCACCATTACACCAAACAT+AGG | + | chr8.1:36738482-36738501 | None:intergenic | 40.0% | |
| TCTCACAATTACGCGTGTTA+CGG | - | chr8.1:36736358-36736377 | MS.gene90766:CDS | 40.0% | |
| TGATTATGTCAACACTGCGT+TGG | - | chr8.1:36738761-36738780 | MS.gene90766:CDS | 40.0% | |
| TTCAAAGTTGGAGACAAGGT+AGG | - | chr8.1:36737423-36737442 | MS.gene90766:intron | 40.0% | |
| TTTCTCCCAAAGTCATATGG+TGG | - | chr8.1:36736316-36736335 | MS.gene90766:CDS | 40.0% | |
| ! | CCCCCACTTAATTTTTGCAT+TGG | + | chr8.1:36737127-36737146 | None:intergenic | 40.0% |
| ! | TTAGGGAACTCAGGATTAGT+AGG | - | chr8.1:36738117-36738136 | MS.gene90766:CDS | 40.0% |
| !! | ACCTATGTTTGGTGTAATGG+TGG | - | chr8.1:36738478-36738497 | MS.gene90766:intron | 40.0% |
| !! | GGAAATACTGGTAGCTCTAA+AGG | + | chr8.1:36738392-36738411 | None:intergenic | 40.0% |
| !!! | TGCTAAAGCTTTTGGTGCTA+AGG | - | chr8.1:36737767-36737786 | MS.gene90766:intron | 40.0% |
| !!! | TTTTGGATGAGCATCGAGAT+TGG | - | chr8.1:36736215-36736234 | MS.gene90766:CDS | 40.0% |
| ACCCAACTTGCAATTAGGTG+TGG | - | chr8.1:36737707-36737726 | MS.gene90766:intron | 45.0% | |
| ATAACATACCCAGGCACTAC+GGG | + | chr8.1:36735755-36735774 | None:intergenic | 45.0% | |
| ATAGATCCATCCCTATTCCC+TGG | - | chr8.1:36737170-36737189 | MS.gene90766:intron | 45.0% | |
| ATAGGAGGGAGTTTGATTGG+AGG | - | chr8.1:36738663-36738682 | MS.gene90766:intron | 45.0% | |
| CGTGAACCACCATATGACTT+TGG | + | chr8.1:36736325-36736344 | None:intergenic | 45.0% | |
| CTCCCTTCAACTTCTCAAGA+AGG | - | chr8.1:36735077-36735096 | MS.gene90766:CDS | 45.0% | |
| CTCGATGGCACTATCACATA+TGG | - | chr8.1:36737546-36737565 | MS.gene90766:intron | 45.0% | |
| CTGGTATGCCAAAATCACGA+CGG | + | chr8.1:36738565-36738584 | None:intergenic | 45.0% | |
| CTTTGCAACTTTGGCATGAG+TGG | + | chr8.1:36737473-36737492 | None:intergenic | 45.0% | |
| GATAGTGCCATCGAGATTCT+TGG | + | chr8.1:36737541-36737560 | None:intergenic | 45.0% | |
| GATGGCACTATCACATATGG+AGG | - | chr8.1:36737549-36737568 | MS.gene90766:intron | 45.0% | |
| GCCAATCCAAAAGCCTTTCT+GGG | + | chr8.1:36735031-36735050 | None:intergenic | 45.0% | |
| GCTGATCACAAAGCTTTCGT+CGG | + | chr8.1:36737595-36737614 | None:intergenic | 45.0% | |
| TCATGTACATGCAGGGAAAC+TGG | - | chr8.1:36735638-36735657 | MS.gene90766:intron | 45.0% | |
| TGCCAATCCAAAAGCCTTTC+TGG | + | chr8.1:36735032-36735051 | None:intergenic | 45.0% | |
| TGTGTCAATGATGCCATCCA+AGG | + | chr8.1:36738285-36738304 | None:intergenic | 45.0% | |
| TTGGAGACAAGGTAGGTGTT+GGG | - | chr8.1:36737430-36737449 | MS.gene90766:intron | 45.0% | |
| ! | TCCCAGAAAGGCTTTTGGAT+TGG | - | chr8.1:36735027-36735046 | MS.gene90766:CDS | 45.0% |
| ! | TTCAGGTTTCACGTCGTGTT+TGG | + | chr8.1:36738724-36738743 | None:intergenic | 45.0% |
| !! | CAATTAGGTGTGGTTGGTCT+TGG | - | chr8.1:36737717-36737736 | MS.gene90766:intron | 45.0% |
| !! | TAGGTGCCGAACACTGATTA+AGG | + | chr8.1:36736493-36736512 | None:intergenic | 45.0% |
| !! | TCTTGGTGGACTTGGTCATA+TGG | - | chr8.1:36737734-36737753 | MS.gene90766:intron | 45.0% |
| !! | ATATTTGATATTAATTTAAT+TGG | - | chr8.1:36735594-36735613 | MS.gene90766:intron | 5.0% |
| AGGGCTATACACTGTGATCC+CGG | + | chr8.1:36737664-36737683 | None:intergenic | 50.0% | |
| CAAAGGTAACAGAGGATGGG+TGG | + | chr8.1:36738315-36738334 | None:intergenic | 50.0% | |
| CATGAACCAGGGAATAGGGA+TGG | + | chr8.1:36737179-36737198 | None:intergenic | 50.0% | |
| GATCGTAGGCGAAGTAACAG+AGG | - | chr8.1:36737380-36737399 | MS.gene90766:intron | 50.0% | |
| GCATCAAGAGGTAGGCCATT+TGG | + | chr8.1:36737621-36737640 | None:intergenic | 50.0% | |
| GTAGGCGAAGTAACAGAGGT+AGG | - | chr8.1:36737384-36737403 | MS.gene90766:intron | 50.0% | |
| GTTGGAGACAAGGTAGGTGT+TGG | - | chr8.1:36737429-36737448 | MS.gene90766:intron | 50.0% | |
| TAACATACCCAGGCACTACG+GGG | + | chr8.1:36735754-36735773 | None:intergenic | 50.0% | |
| ! | AGAGTTGGAGCATCCCAGAA+AGG | - | chr8.1:36735015-36735034 | MS.gene90766:CDS | 50.0% |
| ! | GAGCATCCCAGAAAGGCTTT+TGG | - | chr8.1:36735022-36735041 | MS.gene90766:CDS | 50.0% |
| ! | GCAGTATGCCGTCGTGATTT+TGG | - | chr8.1:36738554-36738573 | MS.gene90766:intron | 50.0% |
| !! | GGTAGCTCTAAAGGCTTCTC+AGG | + | chr8.1:36738383-36738402 | None:intergenic | 50.0% |
| !! | TTAGGTGTGGTTGGTCTTGG+TGG | - | chr8.1:36737720-36737739 | MS.gene90766:intron | 50.0% |
| !! | TTTCTGGGATGCTCCAACTC+TGG | + | chr8.1:36735016-36735035 | None:intergenic | 50.0% |
| !!! | AGGCTTTTGGATTGGCAGCT+AGG | - | chr8.1:36735035-36735054 | MS.gene90766:CDS | 50.0% |
| !!! | GGCTTTTGGATTGGCAGCTA+GGG | - | chr8.1:36735036-36735055 | MS.gene90766:CDS | 50.0% |
| AGAGGAGCTGCAGCATCAAG+AGG | + | chr8.1:36737633-36737652 | None:intergenic | 55.0% | |
| CAGTTTACCCCGTAGTGCCT+GGG | - | chr8.1:36735744-36735763 | MS.gene90766:intron | 55.0% | |
| GAGCTGCAGCATCAAGAGGT+AGG | + | chr8.1:36737629-36737648 | None:intergenic | 55.0% | |
| GCAACTTTGGCATGAGTGGC+AGG | + | chr8.1:36737469-36737488 | None:intergenic | 55.0% | |
| TCAGTTTACCCCGTAGTGCC+TGG | - | chr8.1:36735743-36735762 | MS.gene90766:intron | 55.0% | |
| TGGAGGCTACTCCGACACAA+TGG | - | chr8.1:36737566-36737585 | MS.gene90766:intron | 55.0% | |
| TTAGGCTGCAACAGGCACCT+TGG | - | chr8.1:36738265-36738284 | MS.gene90766:intron | 55.0% | |
| TTCGTCGGCGACCATTGTGT+CGG | + | chr8.1:36737580-36737599 | None:intergenic | 55.0% | |
| TTGGCAGCTAGGGACTCATC+TGG | - | chr8.1:36735046-36735065 | MS.gene90766:CDS | 55.0% | |
| !! | CAAGGTAGGTGTTGGGTGCA+TGG | - | chr8.1:36737437-36737456 | MS.gene90766:intron | 55.0% |
| !! | GTGGTTGGTCTTGGTGGACT+TGG | - | chr8.1:36737726-36737745 | MS.gene90766:intron | 55.0% |
| GCTGCAACAGGCACCTTGGA+TGG | - | chr8.1:36738269-36738288 | MS.gene90766:intron | 60.0% | |
| ACACTGTGATCCCGGCGCAG+AGG | + | chr8.1:36737656-36737675 | None:intergenic | 65.0% | |
| CAGCTCCTCTCCTCTGCGCC+GGG | - | chr8.1:36737643-36737662 | MS.gene90766:intron | 70.0% | |
| GCAGCTCCTCTCCTCTGCGC+CGG | - | chr8.1:36737642-36737661 | MS.gene90766:intron | 70.0% | |
| GTGATCCCGGCGCAGAGGAG+AGG | + | chr8.1:36737651-36737670 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 36735001 | 36738854 | 36735001 | ID=MS.gene90766 |
| chr8.1 | mRNA | 36735001 | 36738854 | 36735001 | ID=MS.gene90766.t1;Parent=MS.gene90766 |
| chr8.1 | exon | 36738757 | 36738854 | 36738757 | ID=MS.gene90766.t1.exon1;Parent=MS.gene90766.t1 |
| chr8.1 | CDS | 36738757 | 36738854 | 36738757 | ID=cds.MS.gene90766.t1;Parent=MS.gene90766.t1 |
| chr8.1 | exon | 36738090 | 36738203 | 36738090 | ID=MS.gene90766.t1.exon2;Parent=MS.gene90766.t1 |
| chr8.1 | CDS | 36738090 | 36738203 | 36738090 | ID=cds.MS.gene90766.t1;Parent=MS.gene90766.t1 |
| chr8.1 | exon | 36735968 | 36736481 | 36735968 | ID=MS.gene90766.t1.exon3;Parent=MS.gene90766.t1 |
| chr8.1 | CDS | 36735968 | 36736481 | 36735968 | ID=cds.MS.gene90766.t1;Parent=MS.gene90766.t1 |
| chr8.1 | exon | 36735433 | 36735586 | 36735433 | ID=MS.gene90766.t1.exon4;Parent=MS.gene90766.t1 |
| chr8.1 | CDS | 36735433 | 36735586 | 36735433 | ID=cds.MS.gene90766.t1;Parent=MS.gene90766.t1 |
| chr8.1 | exon | 36735001 | 36735203 | 36735001 | ID=MS.gene90766.t1.exon5;Parent=MS.gene90766.t1 |
| chr8.1 | CDS | 36735001 | 36735203 | 36735001 | ID=cds.MS.gene90766.t1;Parent=MS.gene90766.t1 |
| Gene Sequence |
| Protein sequence |
