Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070871.t1 | XP_003612978.1 | 88.7 | 362 | 20 | 2 | 1 | 342 | 1 | 361 | 5.10E-186 | 660.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070871.t1 | Q9ZRF1 | 73.7 | 357 | 73 | 2 | 6 | 342 | 4 | 359 | 2.4e-155 | 549.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070871.t1 | B7FIN8 | 88.7 | 362 | 20 | 2 | 1 | 342 | 1 | 361 | 3.7e-186 | 660.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070871.t1 | MTR_5g031250 | 88.674 | 362 | 20 | 2 | 1 | 342 | 1 | 361 | 0.0 | 626 |
| MS.gene070871.t1 | MTR_5g031230 | 75.691 | 362 | 67 | 2 | 1 | 342 | 1 | 361 | 0.0 | 551 |
| MS.gene070871.t1 | MTR_4g115300 | 75.138 | 362 | 69 | 2 | 1 | 342 | 1 | 361 | 0.0 | 546 |
| MS.gene070871.t1 | MTR_5g031390 | 75.138 | 362 | 69 | 2 | 1 | 342 | 1 | 361 | 0.0 | 544 |
| MS.gene070871.t1 | MTR_5g031310 | 74.586 | 362 | 70 | 3 | 1 | 341 | 1 | 361 | 0.0 | 537 |
| MS.gene070871.t1 | MTR_5g031300 | 73.829 | 363 | 73 | 3 | 1 | 342 | 1 | 362 | 0.0 | 531 |
| MS.gene070871.t1 | MTR_5g031190 | 72.928 | 362 | 77 | 2 | 1 | 342 | 1 | 361 | 0.0 | 530 |
| MS.gene070871.t1 | MTR_5g031305 | 74.309 | 362 | 71 | 3 | 1 | 341 | 1 | 361 | 0.0 | 530 |
| MS.gene070871.t1 | MTR_5g031210 | 73.204 | 362 | 76 | 2 | 1 | 342 | 1 | 361 | 0.0 | 525 |
| MS.gene070871.t1 | MTR_5g031360 | 72.159 | 352 | 77 | 2 | 10 | 341 | 12 | 362 | 0.0 | 514 |
| MS.gene070871.t1 | MTR_5g031180 | 74.586 | 362 | 71 | 2 | 1 | 342 | 1 | 361 | 0.0 | 512 |
| MS.gene070871.t1 | MTR_8g068190 | 72.299 | 361 | 79 | 2 | 1 | 341 | 1 | 360 | 0.0 | 507 |
| MS.gene070871.t1 | MTR_5g031250 | 90.244 | 246 | 23 | 1 | 1 | 246 | 1 | 245 | 2.66e-153 | 431 |
| MS.gene070871.t1 | MTR_8g092630 | 58.146 | 356 | 122 | 4 | 8 | 338 | 60 | 413 | 2.80e-134 | 389 |
| MS.gene070871.t1 | MTR_5g031430 | 57.803 | 346 | 125 | 2 | 14 | 339 | 14 | 358 | 3.16e-133 | 384 |
| MS.gene070871.t1 | MTR_1g025950 | 54.857 | 350 | 136 | 3 | 8 | 336 | 7 | 355 | 4.42e-124 | 360 |
| MS.gene070871.t1 | MTR_1g107425 | 50.000 | 344 | 151 | 3 | 11 | 334 | 9 | 351 | 9.77e-113 | 332 |
| MS.gene070871.t1 | MTR_2g009810 | 48.991 | 347 | 154 | 4 | 14 | 339 | 62 | 406 | 3.70e-104 | 311 |
| MS.gene070871.t1 | MTR_1g107425 | 50.704 | 284 | 118 | 4 | 11 | 274 | 9 | 290 | 3.13e-88 | 267 |
| MS.gene070871.t1 | MTR_5g031290 | 77.358 | 106 | 24 | 0 | 236 | 341 | 88 | 193 | 1.51e-52 | 172 |
| MS.gene070871.t1 | MTR_5g031290 | 86.250 | 80 | 10 | 1 | 1 | 79 | 1 | 80 | 3.36e-44 | 150 |
| MS.gene070871.t1 | MTR_2g009820 | 42.471 | 259 | 102 | 5 | 116 | 339 | 8 | 254 | 2.42e-49 | 166 |
| MS.gene070871.t1 | MTR_8g095220 | 27.969 | 261 | 162 | 7 | 25 | 264 | 68 | 323 | 1.44e-22 | 98.2 |
| MS.gene070871.t1 | MTR_8g095220 | 28.870 | 239 | 144 | 7 | 25 | 242 | 68 | 301 | 1.84e-22 | 96.3 |
| MS.gene070871.t1 | MTR_6g466320 | 29.339 | 242 | 155 | 7 | 1 | 239 | 6 | 234 | 9.71e-20 | 89.4 |
| MS.gene070871.t1 | MTR_6g465010 | 29.339 | 242 | 155 | 7 | 1 | 239 | 6 | 234 | 9.71e-20 | 89.4 |
| MS.gene070871.t1 | MTR_6g465010 | 29.825 | 228 | 145 | 6 | 15 | 239 | 3 | 218 | 1.15e-19 | 89.0 |
| MS.gene070871.t1 | MTR_0001s0660 | 24.172 | 302 | 186 | 9 | 38 | 299 | 35 | 333 | 4.80e-13 | 70.1 |
| MS.gene070871.t1 | MTR_5g031380 | 66.667 | 39 | 13 | 0 | 80 | 118 | 19 | 57 | 6.21e-13 | 65.1 |
| MS.gene070871.t1 | MTR_6g068930 | 24.147 | 381 | 232 | 16 | 2 | 334 | 4 | 375 | 1.89e-12 | 68.2 |
| MS.gene070871.t1 | MTR_3g089977 | 22.222 | 351 | 211 | 13 | 39 | 335 | 37 | 379 | 1.82e-11 | 65.1 |
| MS.gene070871.t1 | MTR_3g089940 | 22.493 | 369 | 222 | 14 | 11 | 325 | 12 | 370 | 2.81e-11 | 64.3 |
| MS.gene070871.t1 | MTR_3g089940 | 22.287 | 341 | 204 | 12 | 39 | 325 | 37 | 370 | 3.73e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070871.t1 | AT4G37990 | 68.661 | 351 | 89 | 2 | 11 | 341 | 7 | 356 | 2.89e-159 | 450 |
| MS.gene070871.t1 | AT4G37970 | 60.112 | 356 | 121 | 2 | 6 | 341 | 7 | 361 | 1.70e-150 | 428 |
| MS.gene070871.t1 | AT4G39330 | 57.778 | 360 | 131 | 2 | 1 | 340 | 1 | 359 | 5.16e-150 | 426 |
| MS.gene070871.t1 | AT4G37980 | 64.103 | 351 | 105 | 2 | 11 | 341 | 7 | 356 | 1.08e-149 | 426 |
| MS.gene070871.t1 | AT2G21890 | 56.374 | 353 | 132 | 3 | 11 | 342 | 5 | 356 | 1.37e-139 | 400 |
| MS.gene070871.t1 | AT2G21730 | 56.497 | 354 | 131 | 4 | 11 | 342 | 5 | 357 | 1.12e-138 | 398 |
| MS.gene070871.t1 | AT4G39330 | 55.960 | 302 | 112 | 2 | 1 | 282 | 1 | 301 | 6.61e-117 | 341 |
| MS.gene070871.t1 | AT4G37980 | 63.158 | 285 | 84 | 2 | 11 | 275 | 7 | 290 | 1.81e-112 | 329 |
| MS.gene070871.t1 | AT4G37970 | 56.897 | 290 | 104 | 2 | 6 | 275 | 7 | 295 | 1.95e-110 | 324 |
| MS.gene070871.t1 | AT3G19450 | 50.144 | 347 | 152 | 3 | 11 | 337 | 9 | 354 | 1.18e-100 | 301 |
| MS.gene070871.t1 | AT4G37970 | 59.524 | 252 | 100 | 2 | 6 | 257 | 7 | 256 | 4.54e-100 | 296 |
| MS.gene070871.t1 | AT1G72680 | 47.093 | 344 | 160 | 3 | 16 | 339 | 14 | 355 | 4.66e-100 | 299 |
| MS.gene070871.t1 | AT4G37970 | 60.905 | 243 | 93 | 2 | 6 | 248 | 7 | 247 | 1.67e-98 | 292 |
| MS.gene070871.t1 | AT4G34230 | 50.575 | 348 | 151 | 2 | 7 | 334 | 4 | 350 | 3.40e-96 | 290 |
| MS.gene070871.t1 | AT4G34230 | 50.287 | 348 | 152 | 2 | 7 | 334 | 4 | 350 | 3.33e-95 | 287 |
| MS.gene070871.t1 | AT5G63620 | 29.825 | 228 | 134 | 7 | 24 | 230 | 69 | 291 | 1.78e-23 | 99.4 |
| MS.gene070871.t1 | AT5G63620 | 30.396 | 227 | 132 | 7 | 25 | 230 | 70 | 291 | 7.50e-23 | 99.0 |
| MS.gene070871.t1 | AT5G63620 | 30.396 | 227 | 132 | 7 | 25 | 230 | 70 | 291 | 8.68e-23 | 99.0 |
| MS.gene070871.t1 | AT5G51970 | 29.327 | 208 | 134 | 5 | 35 | 239 | 39 | 236 | 7.32e-17 | 81.3 |
| MS.gene070871.t1 | AT5G51970 | 29.327 | 208 | 134 | 5 | 35 | 239 | 39 | 236 | 7.32e-17 | 81.3 |
| MS.gene070871.t1 | AT1G22430 | 23.734 | 316 | 190 | 11 | 39 | 305 | 42 | 355 | 3.92e-14 | 73.2 |
| MS.gene070871.t1 | AT1G22430 | 23.734 | 316 | 190 | 11 | 39 | 305 | 42 | 355 | 3.92e-14 | 73.2 |
| MS.gene070871.t1 | AT1G22430 | 26.131 | 199 | 128 | 5 | 39 | 219 | 42 | 239 | 5.14e-14 | 72.4 |
| MS.gene070871.t1 | AT1G22430 | 26.131 | 199 | 128 | 5 | 39 | 219 | 42 | 239 | 6.85e-14 | 71.6 |
| MS.gene070871.t1 | AT1G22430 | 26.131 | 199 | 128 | 5 | 39 | 219 | 42 | 239 | 6.85e-14 | 71.6 |
| MS.gene070871.t1 | AT5G43940 | 26.168 | 214 | 135 | 5 | 39 | 234 | 36 | 244 | 3.09e-13 | 70.5 |
| MS.gene070871.t1 | AT5G43940 | 26.168 | 214 | 135 | 5 | 39 | 234 | 48 | 256 | 3.13e-13 | 70.5 |
Find 86 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGTCCTCTTCGATATTT+TGG | 0.153434 | 5.4:+21368008 | MS.gene070871:CDS |
| CCCTCACATTCCTTTAATAA+TGG | 0.196862 | 5.4:+21369604 | MS.gene070871:CDS |
| TATCGATTTGTGATTGATAT+TGG | 0.198958 | 5.4:+21369947 | MS.gene070871:CDS |
| TTCTTTGGATGTTCAAATTC+AGG | 0.206123 | 5.4:-21367261 | None:intergenic |
| CTATATGTTTGTGTTTGTTT+AGG | 0.221743 | 5.4:-21367846 | None:intergenic |
| AACAACTTACCCATTATTAA+AGG | 0.228051 | 5.4:-21369614 | None:intergenic |
| GCCCAACCAAATGCCTTCTT+TGG | 0.260645 | 5.4:-21367276 | None:intergenic |
| TATATGTTTGTGTTTGTTTA+GGG | 0.265623 | 5.4:-21367845 | None:intergenic |
| CCTCACATTCCTTTAATAAT+GGG | 0.310674 | 5.4:+21369605 | MS.gene070871:CDS |
| CCCCTTTCAACTTCTCTAGA+AGG | 0.321261 | 5.4:+21367325 | MS.gene070871:CDS |
| TCTTGGTGGACTTGGTCACT+TGG | 0.333930 | 5.4:+21368067 | MS.gene070871:CDS |
| GCACTTGCCAATCTTCTATC+AGG | 0.362726 | 5.4:-21368143 | None:intergenic |
| GTGAAGTTTGCAAAAGCTTT+TGG | 0.362966 | 5.4:+21368092 | MS.gene070871:CDS |
| GAACATCCAAAGAAGGCATT+TGG | 0.363606 | 5.4:+21367270 | MS.gene070871:CDS |
| TCTACCTATCCACTAGTTCC+TGG | 0.381163 | 5.4:+21367585 | MS.gene070871:CDS |
| GCTTCAAGTGGTAAGCTATC+AGG | 0.381337 | 5.4:-21367951 | None:intergenic |
| GCAGGGAGAAAGACGATATC+TGG | 0.389267 | 5.4:+21369785 | MS.gene070871:intron |
| GATATTTCACATCTGCTTTG+AGG | 0.391986 | 5.4:-21369928 | None:intergenic |
| CATTTAAAGTACAGTATTGC+GGG | 0.393811 | 5.4:+21367517 | MS.gene070871:CDS |
| GGGAGCTCCGGAGGCTTCTC+AGG | 0.395546 | 5.4:-21369584 | None:intergenic |
| ATAGGTATTGTTGGTCTTGG+TGG | 0.404910 | 5.4:+21368053 | MS.gene070871:CDS |
| ATTGTTGGTCTTGGTGGACT+TGG | 0.407291 | 5.4:+21368059 | MS.gene070871:CDS |
| CATCCTCTCTTACCTCTAGT+TGG | 0.407705 | 5.4:+21369521 | MS.gene070871:CDS |
| ACGGAAAACTTATAATGGTC+GGG | 0.427170 | 5.4:+21369558 | MS.gene070871:CDS |
| TTGTACAAAATTTAAGAACT+AGG | 0.429877 | 5.4:-21369983 | None:intergenic |
| ATATCACGGAAAACTTATAA+TGG | 0.431863 | 5.4:+21369553 | MS.gene070871:CDS |
| GATTATAGGCATGAGGTTGC+TGG | 0.437448 | 5.4:+21367699 | MS.gene070871:intron |
| ACGATATCTGGCAGTGGCAT+TGG | 0.438228 | 5.4:+21369797 | MS.gene070871:CDS |
| TCCAAAGAAGGCATTTGGTT+GGG | 0.449991 | 5.4:+21367275 | MS.gene070871:CDS |
| GTCGTGAACTTTCAGAGAAA+CGG | 0.456414 | 5.4:+21367479 | MS.gene070871:intron |
| AATATAGGTATTGTTGGTCT+TGG | 0.457645 | 5.4:+21368050 | MS.gene070871:CDS |
| TCGTGAACTTTCAGAGAAAC+GGG | 0.468716 | 5.4:+21367480 | MS.gene070871:intron |
| GGTATGAATATAGGTATTGT+TGG | 0.472768 | 5.4:+21368044 | MS.gene070871:CDS |
| TGCTAAACACGATATAAAAC+CGG | 0.477369 | 5.4:+21369856 | MS.gene070871:CDS |
| AAAGTAGAGAAGTTCAAAGT+TGG | 0.481176 | 5.4:+21367744 | MS.gene070871:CDS |
| TACATCACCTGATAGAAGAT+TGG | 0.490146 | 5.4:+21368136 | MS.gene070871:CDS |
| ATAGGTATGACTTCGATGTC+CGG | 0.491179 | 5.4:-21369875 | None:intergenic |
| GACAAGCCTGGTATGAATAT+AGG | 0.491634 | 5.4:+21368035 | MS.gene070871:CDS |
| TAAGAAATGAATCAGCTCCT+AGG | 0.495743 | 5.4:-21369340 | None:intergenic |
| ACCTTCTAGAGAAGTTGAAA+GGG | 0.496182 | 5.4:-21367326 | None:intergenic |
| CTTGGTGGACTTGGTCACTT+GGG | 0.501069 | 5.4:+21368068 | MS.gene070871:CDS |
| GCTGCTCCTCTCCTTTGTGC+TGG | 0.501431 | 5.4:+21367975 | MS.gene070871:CDS |
| CACGGAAAACTTATAATGGT+CGG | 0.507386 | 5.4:+21369557 | MS.gene070871:CDS |
| TGGGCAGCAAGAGACACTTC+TGG | 0.507758 | 5.4:+21367294 | MS.gene070871:CDS |
| AAAGGAATGTGAGGGAGCTC+CGG | 0.512634 | 5.4:-21369596 | None:intergenic |
| AACCTTCTAGAGAAGTTGAA+AGG | 0.514607 | 5.4:-21367327 | None:intergenic |
| AGTTGGAGACAAAGTGGGTG+TGG | 0.517700 | 5.4:+21367761 | MS.gene070871:CDS |
| ATATCTGGCAGTGGCATTGG+AGG | 0.523014 | 5.4:+21369800 | MS.gene070871:CDS |
| ATCCAAAGAAGGCATTTGGT+TGG | 0.531418 | 5.4:+21367274 | MS.gene070871:CDS |
| CGGGGCACCTGAGAAGCCTC+CGG | 0.531722 | 5.4:+21369577 | MS.gene070871:CDS |
| TGAATTTGAACATCCAAAGA+AGG | 0.532781 | 5.4:+21367263 | MS.gene070871:CDS |
| CCCATTATTAAAGGAATGTG+AGG | 0.542582 | 5.4:-21369605 | None:intergenic |
| GTTGGATTATTAAAATATCA+CGG | 0.550914 | 5.4:+21369539 | MS.gene070871:CDS |
| TGGAGGGTACTCTGACTCAA+TGG | 0.557267 | 5.4:+21367899 | MS.gene070871:CDS |
| GGACATCGAAGTCATACCTA+TGG | 0.559852 | 5.4:+21369877 | MS.gene070871:CDS |
| AGCGATGGAACCATCACGTA+TGG | 0.563678 | 5.4:+21367879 | MS.gene070871:CDS |
| CTACCTATCCACTAGTTCCT+GGG | 0.565757 | 5.4:+21367586 | MS.gene070871:CDS |
| CATACGTACCCAGGAACTAG+TGG | 0.581134 | 5.4:-21367594 | None:intergenic |
| GCATTTAAAGTACAGTATTG+CGG | 0.588287 | 5.4:+21367516 | MS.gene070871:CDS |
| GATATATGATTATAGGCATG+AGG | 0.590572 | 5.4:+21367692 | MS.gene070871:intron |
| GCTGGTATAGTCACAGAAGT+GGG | 0.600918 | 5.4:+21367717 | MS.gene070871:CDS |
| AAAGAAGCAATAGAAAACCT+AGG | 0.602446 | 5.4:+21369323 | MS.gene070871:intron |
| CGGAAAACTTATAATGGTCG+GGG | 0.604207 | 5.4:+21369559 | MS.gene070871:CDS |
| GATGGAACCATCACGTATGG+AGG | 0.605529 | 5.4:+21367882 | MS.gene070871:CDS |
| TGCTGGTATAGTCACAGAAG+TGG | 0.607495 | 5.4:+21367716 | MS.gene070871:CDS |
| GTTCAAAGTTGGAGACAAAG+TGG | 0.616401 | 5.4:+21367755 | MS.gene070871:CDS |
| GGAATGTGAGGGAGCTCCGG+AGG | 0.622096 | 5.4:-21369593 | None:intergenic |
| TATCATTGATACAGTTTCAG+CGG | 0.623020 | 5.4:+21369496 | MS.gene070871:intron |
| GCTGTGTTAACATAATCCAT+AGG | 0.623116 | 5.4:-21369893 | None:intergenic |
| GTAATACCAGCACAAAGGAG+AGG | 0.623289 | 5.4:-21367981 | None:intergenic |
| AATCCAACTAGAGGTAAGAG+AGG | 0.623627 | 5.4:-21369524 | None:intergenic |
| AGAAAGACGATATCTGGCAG+TGG | 0.629634 | 5.4:+21369791 | MS.gene070871:CDS |
| GTACCCAGGAACTAGTGGAT+AGG | 0.637899 | 5.4:-21367589 | None:intergenic |
| CCATTATTAAAGGAATGTGA+GGG | 0.639713 | 5.4:-21369604 | None:intergenic |
| TTCAAAGTTGGAGACAAAGT+GGG | 0.640553 | 5.4:+21367756 | MS.gene070871:CDS |
| GTTGGAGACAAAGTGGGTGT+GGG | 0.640763 | 5.4:+21367762 | MS.gene070871:CDS |
| AGAGGAGCAGCAGCTTCAAG+TGG | 0.642094 | 5.4:-21367963 | None:intergenic |
| TCGAGTCCAAAATATCGAAG+AGG | 0.642096 | 5.4:-21368014 | None:intergenic |
| CCTTCTAGAGAAGTTGAAAG+GGG | 0.645104 | 5.4:-21367325 | None:intergenic |
| AGAGTACCCTCCATACGTGA+TGG | 0.646770 | 5.4:-21367889 | None:intergenic |
| ATGGAACCATCACGTATGGA+GGG | 0.653409 | 5.4:+21367883 | MS.gene070871:CDS |
| TATAGTGCGAAATACAGCGA+TGG | 0.656053 | 5.4:+21367864 | MS.gene070871:CDS |
| TCGCGCATGCCAAAATTGTG+AGG | 0.663146 | 5.4:+21367803 | MS.gene070871:CDS |
| ACAATACCTATATTCATACC+AGG | 0.667309 | 5.4:-21368041 | None:intergenic |
| GTATTGCGGGATATGTCACT+CGG | 0.700120 | 5.4:+21367530 | MS.gene070871:CDS |
| ACACAGTAATACCAGCACAA+AGG | 0.710961 | 5.4:-21367986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATAATAATAATCTTAAT+TGG | + | chr5.4:21369408-21369427 | MS.gene070871:intron | 10.0% |
| !! | TAAGATTATTATTATAACTT+TGG | - | chr5.4:21369406-21369425 | None:intergenic | 10.0% |
| !!! | ATTTTGATGATATTATTTAT+TGG | + | chr5.4:21369763-21369782 | MS.gene070871:intron | 10.0% |
| !! | AATTAAAAATTCCTAAGATA+TGG | - | chr5.4:21367640-21367659 | None:intergenic | 15.0% |
| !! | AATTTAAACATACATAAACT+GGG | + | chr5.4:21368856-21368875 | MS.gene070871:intron | 15.0% |
| !! | AGAAAATCATTAGTAATAAT+AGG | - | chr5.4:21368407-21368426 | None:intergenic | 15.0% |
| !! | TAGATTTGATTAAGAAAATA+TGG | + | chr5.4:21368325-21368344 | MS.gene070871:intron | 15.0% |
| !! | TCTAATTGATATATGATTAT+AGG | + | chr5.4:21367685-21367704 | MS.gene070871:intron | 15.0% |
| !! | TTTATTAGAACAATTCAATT+AGG | + | chr5.4:21368593-21368612 | MS.gene070871:intron | 15.0% |
| !!! | GTTTATACATTTATTTTCAT+AGG | - | chr5.4:21369743-21369762 | None:intergenic | 15.0% |
| !!! | TTATTTTCATAGGTATAAAA+GGG | - | chr5.4:21369733-21369752 | None:intergenic | 15.0% |
| !!! | TTGACAAAATAATTATTTCT+TGG | + | chr5.4:21367453-21367472 | MS.gene070871:intron | 15.0% |
| !!! | TTTATTTTCATAGGTATAAA+AGG | - | chr5.4:21369734-21369753 | None:intergenic | 15.0% |
| !! | AAAAGATGTATAAAATGAAG+AGG | - | chr5.4:21367367-21367386 | None:intergenic | 20.0% |
| !! | AATCATGTTTATATTTGATC+AGG | + | chr5.4:21368658-21368677 | MS.gene070871:intron | 20.0% |
| !! | GAATTTAAACATACATAAAC+TGG | + | chr5.4:21368855-21368874 | MS.gene070871:intron | 20.0% |
| !! | GTTGGATTATTAAAATATCA+CGG | + | chr5.4:21369539-21369558 | MS.gene070871:CDS | 20.0% |
| !! | TATATGTTTGTGTTTGTTTA+GGG | - | chr5.4:21367848-21367867 | None:intergenic | 20.0% |
| !! | TCATATGATCAAAAATGAAT+GGG | + | chr5.4:21367557-21367576 | MS.gene070871:CDS | 20.0% |
| !! | TTCATATGATCAAAAATGAA+TGG | + | chr5.4:21367556-21367575 | MS.gene070871:CDS | 20.0% |
| !! | TTGAATTGTTCTAATAAACA+TGG | - | chr5.4:21368591-21368610 | None:intergenic | 20.0% |
| !!! | TATTTTAATAATCCAACTAG+AGG | - | chr5.4:21369536-21369555 | None:intergenic | 20.0% |
| ! | AACAACTTACCCATTATTAA+AGG | - | chr5.4:21369617-21369636 | None:intergenic | 25.0% |
| ! | ACTTTAACAAACCATATCTT+AGG | + | chr5.4:21367626-21367645 | MS.gene070871:intron | 25.0% |
| ! | ATATCACGGAAAACTTATAA+TGG | + | chr5.4:21369553-21369572 | MS.gene070871:CDS | 25.0% |
| ! | CAATTAGAATAAAATTGCAG+TGG | - | chr5.4:21367673-21367692 | None:intergenic | 25.0% |
| ! | CATATGATCAAAAATGAATG+GGG | + | chr5.4:21367558-21367577 | MS.gene070871:CDS | 25.0% |
| ! | CTATATGTTTGTGTTTGTTT+AGG | - | chr5.4:21367849-21367868 | None:intergenic | 25.0% |
| ! | GATGATAAAAGCAACAAATT+TGG | - | chr5.4:21369206-21369225 | None:intergenic | 25.0% |
| ! | GATGATATTATTTATTGGCA+GGG | + | chr5.4:21369768-21369787 | MS.gene070871:intron | 25.0% |
| ! | TGATGATATTATTTATTGGC+AGG | + | chr5.4:21369767-21369786 | MS.gene070871:intron | 25.0% |
| ! | TTCAATCGCGTTATAAAATT+AGG | + | chr5.4:21368228-21368247 | MS.gene070871:intron | 25.0% |
| ! | TTTACTACTTCGATAGTATT+TGG | - | chr5.4:21368170-21368189 | None:intergenic | 25.0% |
| !! | AATCGTTTGTTAGTGATATT+AGG | - | chr5.4:21368551-21368570 | None:intergenic | 25.0% |
| !! | TTTATACCTGCATTTTATCT+TGG | - | chr5.4:21369376-21369395 | None:intergenic | 25.0% |
| !!! | TATCGATTTGTGATTGATAT+TGG | + | chr5.4:21369947-21369966 | MS.gene070871:CDS | 25.0% |
| !!! | TTTATTTTTGTTTTGCCACT+AGG | + | chr5.4:21368262-21368281 | MS.gene070871:intron | 25.0% |
| AAAGAAGCAATAGAAAACCT+AGG | + | chr5.4:21369323-21369342 | MS.gene070871:intron | 30.0% | |
| AAAGTAGAGAAGTTCAAAGT+TGG | + | chr5.4:21367744-21367763 | MS.gene070871:CDS | 30.0% | |
| AAATCTCTTAGAGATTAGGT+CGG | - | chr5.4:21368793-21368812 | None:intergenic | 30.0% | |
| ACAATACCTATATTCATACC+AGG | - | chr5.4:21368044-21368063 | None:intergenic | 30.0% | |
| ACAGCAACATATGATCAATT+AGG | + | chr5.4:21368750-21368769 | MS.gene070871:intron | 30.0% | |
| AGATGTATAAAATGAAGAGG+TGG | - | chr5.4:21367364-21367383 | None:intergenic | 30.0% | |
| AGCTAAATCTCTTAGAGATT+AGG | - | chr5.4:21368797-21368816 | None:intergenic | 30.0% | |
| ATTGCTTCTTTCTCTTTGTT+GGG | - | chr5.4:21369314-21369333 | None:intergenic | 30.0% | |
| CAGCAACATATGATCAATTA+GGG | + | chr5.4:21368751-21368770 | MS.gene070871:intron | 30.0% | |
| CCATTATTAAAGGAATGTGA+GGG | - | chr5.4:21369607-21369626 | None:intergenic | 30.0% | |
| CCTCACATTCCTTTAATAAT+GGG | + | chr5.4:21369605-21369624 | MS.gene070871:CDS | 30.0% | |
| GATATATGATTATAGGCATG+AGG | + | chr5.4:21367692-21367711 | MS.gene070871:intron | 30.0% | |
| TAACGTTCATAAAACCTTCA+AGG | - | chr5.4:21368527-21368546 | None:intergenic | 30.0% | |
| TATCATTGATACAGTTTCAG+CGG | + | chr5.4:21369496-21369515 | MS.gene070871:intron | 30.0% | |
| TATTGCTTCTTTCTCTTTGT+TGG | - | chr5.4:21369315-21369334 | None:intergenic | 30.0% | |
| TGAATTTGAACATCCAAAGA+AGG | + | chr5.4:21367263-21367282 | MS.gene070871:CDS | 30.0% | |
| TGCTAAACACGATATAAAAC+CGG | + | chr5.4:21369856-21369875 | MS.gene070871:CDS | 30.0% | |
| TTCTTTGGATGTTCAAATTC+AGG | - | chr5.4:21367264-21367283 | None:intergenic | 30.0% | |
| ! | AATATAGGTATTGTTGGTCT+TGG | + | chr5.4:21368050-21368069 | MS.gene070871:CDS | 30.0% |
| ! | AATGATTTTATATGCTGCGA+TGG | + | chr5.4:21369460-21369479 | MS.gene070871:intron | 30.0% |
| ! | ATGATTTTATATGCTGCGAT+GGG | + | chr5.4:21369461-21369480 | MS.gene070871:intron | 30.0% |
| ! | CAAGATTTTCCTCACAATTT+TGG | - | chr5.4:21367815-21367834 | None:intergenic | 30.0% |
| ! | CATTTAAAGTACAGTATTGC+GGG | + | chr5.4:21367517-21367536 | MS.gene070871:CDS | 30.0% |
| ! | GCATTTAAAGTACAGTATTG+CGG | + | chr5.4:21367516-21367535 | MS.gene070871:CDS | 30.0% |
| ! | GCTGTCATTACGTAATTTTT+AGG | - | chr5.4:21369279-21369298 | None:intergenic | 30.0% |
| ! | GGTATGAATATAGGTATTGT+TGG | + | chr5.4:21368044-21368063 | MS.gene070871:CDS | 30.0% |
| ! | TATAGTCCTCTTCGATATTT+TGG | + | chr5.4:21368008-21368027 | MS.gene070871:CDS | 30.0% |
| !! | CTAATAAACATGGTTAGTCT+AGG | - | chr5.4:21368581-21368600 | None:intergenic | 30.0% |
| AAGGATTATTAGACCACCTA+AGG | - | chr5.4:21368508-21368527 | None:intergenic | 35.0% | |
| AAGGGCTGAAAAGGAAATTA+GGG | - | chr5.4:21369056-21369075 | None:intergenic | 35.0% | |
| AAGTTAAAAACAGTCCTCGT+GGG | - | chr5.4:21368202-21368221 | None:intergenic | 35.0% | |
| AATAGGTGCAGTAACCAATT+AGG | - | chr5.4:21368390-21368409 | None:intergenic | 35.0% | |
| ACGGAAAACTTATAATGGTC+GGG | + | chr5.4:21369558-21369577 | MS.gene070871:CDS | 35.0% | |
| AGCAACAAATTTGGAAGATC+TGG | - | chr5.4:21369197-21369216 | None:intergenic | 35.0% | |
| ATAGGTGCAGTAACCAATTA+GGG | - | chr5.4:21368389-21368408 | None:intergenic | 35.0% | |
| ATCGTGATACGATTTCAAGA+AGG | - | chr5.4:21369075-21369094 | None:intergenic | 35.0% | |
| ATTAGACCACCTAAGGAATT+AGG | - | chr5.4:21368501-21368520 | None:intergenic | 35.0% | |
| CACGGAAAACTTATAATGGT+CGG | + | chr5.4:21369557-21369576 | MS.gene070871:CDS | 35.0% | |
| CCCATTATTAAAGGAATGTG+AGG | - | chr5.4:21369608-21369627 | None:intergenic | 35.0% | |
| CCCTCACATTCCTTTAATAA+TGG | + | chr5.4:21369604-21369623 | MS.gene070871:CDS | 35.0% | |
| CTAACTCAAGGGATTGATTA+GGG | - | chr5.4:21368455-21368474 | None:intergenic | 35.0% | |
| GATATTTCACATCTGCTTTG+AGG | - | chr5.4:21369931-21369950 | None:intergenic | 35.0% | |
| GATTGTGATCGATATGTTCA+CGG | + | chr5.4:21369701-21369720 | MS.gene070871:intron | 35.0% | |
| GCTGTGTTAACATAATCCAT+AGG | - | chr5.4:21369896-21369915 | None:intergenic | 35.0% | |
| GTATAAAATGAAGAGGTGGA+TGG | - | chr5.4:21367360-21367379 | None:intergenic | 35.0% | |
| TAAGAAATGAATCAGCTCCT+AGG | - | chr5.4:21369343-21369362 | None:intergenic | 35.0% | |
| TACATCACCTGATAGAAGAT+TGG | + | chr5.4:21368136-21368155 | MS.gene070871:CDS | 35.0% | |
| TCATGACCAAGATAAAATGC+AGG | + | chr5.4:21369367-21369386 | MS.gene070871:intron | 35.0% | |
| TCGTGATACGATTTCAAGAA+GGG | - | chr5.4:21369074-21369093 | None:intergenic | 35.0% | |
| TCTAACTCAAGGGATTGATT+AGG | - | chr5.4:21368456-21368475 | None:intergenic | 35.0% | |
| TCTTGAAATCGTATCACGAT+TGG | + | chr5.4:21369075-21369094 | MS.gene070871:intron | 35.0% | |
| TGAAGTCAGTCTCAAACAAA+GGG | - | chr5.4:21368958-21368977 | None:intergenic | 35.0% | |
| TGTTGTGAAAAATGTTCCCA+CGG | + | chr5.4:21369633-21369652 | MS.gene070871:intron | 35.0% | |
| TTAGACCACCTAAGGAATTA+GGG | - | chr5.4:21368500-21368519 | None:intergenic | 35.0% | |
| TTCAAAGTTGGAGACAAAGT+GGG | + | chr5.4:21367756-21367775 | MS.gene070871:CDS | 35.0% | |
| ! | AACAAAGGGGATTACGATTT+TGG | - | chr5.4:21368944-21368963 | None:intergenic | 35.0% |
| ! | AACCTTCTAGAGAAGTTGAA+AGG | - | chr5.4:21367330-21367349 | None:intergenic | 35.0% |
| ! | ACCTTCTAGAGAAGTTGAAA+GGG | - | chr5.4:21367329-21367348 | None:intergenic | 35.0% |
| ! | AGACTGACTTCAGCTTAAAT+AGG | + | chr5.4:21368966-21368985 | MS.gene070871:intron | 35.0% |
| ! | GTGAAGTTTGCAAAAGCTTT+TGG | + | chr5.4:21368092-21368111 | MS.gene070871:CDS | 35.0% |
| !! | AAACATGGTTAGTCTAGGAA+TGG | - | chr5.4:21368576-21368595 | None:intergenic | 35.0% |
| !!! | TGTTGCTTTTATCATCTCCT+GGG | + | chr5.4:21369210-21369229 | MS.gene070871:intron | 35.0% |
| !!! | TTGTTGCTTTTATCATCTCC+TGG | + | chr5.4:21369209-21369228 | MS.gene070871:intron | 35.0% |
| AAACCAAATCTACTGCCTAG+TGG | - | chr5.4:21368280-21368299 | None:intergenic | 40.0% | |
| AAATTCAAACACTAGAGCCG+TGG | - | chr5.4:21369653-21369672 | None:intergenic | 40.0% | |
| AATCCAACTAGAGGTAAGAG+AGG | - | chr5.4:21369527-21369546 | None:intergenic | 40.0% | |
| AATTCAAACACTAGAGCCGT+GGG | - | chr5.4:21369652-21369671 | None:intergenic | 40.0% | |
| ACACAGTAATACCAGCACAA+AGG | - | chr5.4:21367989-21368008 | None:intergenic | 40.0% | |
| ACCAATTAGGGGAAACATAG+AGG | - | chr5.4:21368377-21368396 | None:intergenic | 40.0% | |
| AGAAACGGGTGAAAAAGATG+TGG | + | chr5.4:21367494-21367513 | MS.gene070871:CDS | 40.0% | |
| ATAGGTATGACTTCGATGTC+CGG | - | chr5.4:21369878-21369897 | None:intergenic | 40.0% | |
| ATATGGAGAGAGATGAGATC+AGG | + | chr5.4:21368342-21368361 | MS.gene070871:intron | 40.0% | |
| CGGAAAACTTATAATGGTCG+GGG | + | chr5.4:21369559-21369578 | MS.gene070871:CDS | 40.0% | |
| CTGAAGTCAGTCTCAAACAA+AGG | - | chr5.4:21368959-21368978 | None:intergenic | 40.0% | |
| GAAGGGCTGAAAAGGAAATT+AGG | - | chr5.4:21369057-21369076 | None:intergenic | 40.0% | |
| GAAGTCAGTCTCAAACAAAG+GGG | - | chr5.4:21368957-21368976 | None:intergenic | 40.0% | |
| GAAGTTAAAAACAGTCCTCG+TGG | - | chr5.4:21368203-21368222 | None:intergenic | 40.0% | |
| GACAAGCCTGGTATGAATAT+AGG | + | chr5.4:21368035-21368054 | MS.gene070871:CDS | 40.0% | |
| GATTTCAAGAAGGGCTGAAA+AGG | - | chr5.4:21369065-21369084 | None:intergenic | 40.0% | |
| GCTGAAAATCGCAATACGAT+TGG | + | chr5.4:21369165-21369184 | MS.gene070871:intron | 40.0% | |
| GGTGGTCTAATAATCCTTGA+AGG | + | chr5.4:21368510-21368529 | MS.gene070871:intron | 40.0% | |
| GTAAAATTATCGATCCCACG+AGG | + | chr5.4:21368185-21368204 | MS.gene070871:intron | 40.0% | |
| GTCGTGAACTTTCAGAGAAA+CGG | + | chr5.4:21367479-21367498 | MS.gene070871:intron | 40.0% | |
| GTTCAAAGTTGGAGACAAAG+TGG | + | chr5.4:21367755-21367774 | MS.gene070871:CDS | 40.0% | |
| TAAAATGAAGAGGTGGATGG+AGG | - | chr5.4:21367357-21367376 | None:intergenic | 40.0% | |
| TAGACCACCTAAGGAATTAG+GGG | - | chr5.4:21368499-21368518 | None:intergenic | 40.0% | |
| TAGGTCTAAGTCGAAAGCTA+TGG | + | chr5.4:21368612-21368631 | MS.gene070871:intron | 40.0% | |
| TAGGTGCAGTAACCAATTAG+GGG | - | chr5.4:21368388-21368407 | None:intergenic | 40.0% | |
| TATAGTGCGAAATACAGCGA+TGG | + | chr5.4:21367864-21367883 | MS.gene070871:CDS | 40.0% | |
| TCCTCTATGTTTCCCCTAAT+TGG | + | chr5.4:21368373-21368392 | MS.gene070871:intron | 40.0% | |
| TCGAGTCCAAAATATCGAAG+AGG | - | chr5.4:21368017-21368036 | None:intergenic | 40.0% | |
| TCGTGAACTTTCAGAGAAAC+GGG | + | chr5.4:21367480-21367499 | MS.gene070871:intron | 40.0% | |
| ! | AAGAAGAGGGTTCTAACTCA+AGG | - | chr5.4:21368467-21368486 | None:intergenic | 40.0% |
| ! | AGAAGAGGGTTCTAACTCAA+GGG | - | chr5.4:21368466-21368485 | None:intergenic | 40.0% |
| ! | AGGGTTTAAAGTACCAATCG+TGG | - | chr5.4:21369037-21369056 | None:intergenic | 40.0% |
| ! | CCTTCTAGAGAAGTTGAAAG+GGG | - | chr5.4:21367328-21367347 | None:intergenic | 40.0% |
| !! | ATAGGTATTGTTGGTCTTGG+TGG | + | chr5.4:21368053-21368072 | MS.gene070871:CDS | 40.0% |
| !! | ATCCAAAGAAGGCATTTGGT+TGG | + | chr5.4:21367274-21367293 | MS.gene070871:CDS | 40.0% |
| !! | GAACATCCAAAGAAGGCATT+TGG | + | chr5.4:21367270-21367289 | MS.gene070871:CDS | 40.0% |
| !! | GTCAGAGAGCATGTTTTTGA+AGG | - | chr5.4:21369124-21369143 | None:intergenic | 40.0% |
| !! | TCCAAAGAAGGCATTTGGTT+GGG | + | chr5.4:21367275-21367294 | MS.gene070871:CDS | 40.0% |
| ACTACAGCCCCTAATTCCTT+AGG | + | chr5.4:21368489-21368508 | MS.gene070871:intron | 45.0% | |
| AGAAAGACGATATCTGGCAG+TGG | + | chr5.4:21369791-21369810 | MS.gene070871:CDS | 45.0% | |
| AGGGGCTGTAGTTTAAGAAG+AGG | - | chr5.4:21368481-21368500 | None:intergenic | 45.0% | |
| ATATGCTGCGATGGGTACTT+TGG | + | chr5.4:21369469-21369488 | MS.gene070871:intron | 45.0% | |
| ATGGAACCATCACGTATGGA+GGG | + | chr5.4:21367883-21367902 | MS.gene070871:CDS | 45.0% | |
| CATCCTCTCTTACCTCTAGT+TGG | + | chr5.4:21369521-21369540 | MS.gene070871:CDS | 45.0% | |
| CCCCTTTCAACTTCTCTAGA+AGG | + | chr5.4:21367325-21367344 | MS.gene070871:CDS | 45.0% | |
| CTAAGCAACATTAAGTGCCC+AGG | - | chr5.4:21369230-21369249 | None:intergenic | 45.0% | |
| CTACCTATCCACTAGTTCCT+GGG | + | chr5.4:21367586-21367605 | MS.gene070871:CDS | 45.0% | |
| GAAATCGTATCACGATTGGC+TGG | + | chr5.4:21369079-21369098 | MS.gene070871:intron | 45.0% | |
| GATTATAGGCATGAGGTTGC+TGG | + | chr5.4:21367699-21367718 | MS.gene070871:intron | 45.0% | |
| GCACTTGCCAATCTTCTATC+AGG | - | chr5.4:21368146-21368165 | None:intergenic | 45.0% | |
| GCTGGTATAGTCACAGAAGT+GGG | + | chr5.4:21367717-21367736 | MS.gene070871:CDS | 45.0% | |
| GCTTCAAGTGGTAAGCTATC+AGG | - | chr5.4:21367954-21367973 | None:intergenic | 45.0% | |
| GGACATCGAAGTCATACCTA+TGG | + | chr5.4:21369877-21369896 | MS.gene070871:CDS | 45.0% | |
| GGGGCTGTAGTTTAAGAAGA+GGG | - | chr5.4:21368480-21368499 | None:intergenic | 45.0% | |
| GTAATACCAGCACAAAGGAG+AGG | - | chr5.4:21367984-21368003 | None:intergenic | 45.0% | |
| GTATTGCGGGATATGTCACT+CGG | + | chr5.4:21367530-21367549 | MS.gene070871:CDS | 45.0% | |
| TCTACCTATCCACTAGTTCC+TGG | + | chr5.4:21367585-21367604 | MS.gene070871:CDS | 45.0% | |
| TGCTGGTATAGTCACAGAAG+TGG | + | chr5.4:21367716-21367735 | MS.gene070871:CDS | 45.0% | |
| TTGCCACTAGGCAGTAGATT+TGG | + | chr5.4:21368274-21368293 | MS.gene070871:intron | 45.0% | |
| ! | TGCCATCGTGGTACGATTTT+GGG | - | chr5.4:21369005-21369024 | None:intergenic | 45.0% |
| !! | ATTGTTGGTCTTGGTGGACT+TGG | + | chr5.4:21368059-21368078 | MS.gene070871:CDS | 45.0% |
| !! | GAGCATGTTTTTGAAGGTGC+TGG | - | chr5.4:21369118-21369137 | None:intergenic | 45.0% |
| !! | GTGCGATTTTAACACCCAGA+AGG | - | chr5.4:21368912-21368931 | None:intergenic | 45.0% |
| !! | TATTTTGGACTCGACAAGCC+TGG | + | chr5.4:21368023-21368042 | MS.gene070871:CDS | 45.0% |
| AAAGGAATGTGAGGGAGCTC+CGG | - | chr5.4:21369599-21369618 | None:intergenic | 50.0% | |
| ACAGCCCCTAATTCCTTAGG+TGG | + | chr5.4:21368492-21368511 | MS.gene070871:intron | 50.0% | |
| ACGATATCTGGCAGTGGCAT+TGG | + | chr5.4:21369797-21369816 | MS.gene070871:CDS | 50.0% | |
| AGCGATGGAACCATCACGTA+TGG | + | chr5.4:21367879-21367898 | MS.gene070871:CDS | 50.0% | |
| AGTTCGAAGCATACGTACCC+AGG | - | chr5.4:21367606-21367625 | None:intergenic | 50.0% | |
| AGTTGGAGACAAAGTGGGTG+TGG | + | chr5.4:21367761-21367780 | MS.gene070871:CDS | 50.0% | |
| CATACGTACCCAGGAACTAG+TGG | - | chr5.4:21367597-21367616 | None:intergenic | 50.0% | |
| GATGGAACCATCACGTATGG+AGG | + | chr5.4:21367882-21367901 | MS.gene070871:CDS | 50.0% | |
| GCAGGGAGAAAGACGATATC+TGG | + | chr5.4:21369785-21369804 | MS.gene070871:intron | 50.0% | |
| GCCCAACCAAATGCCTTCTT+TGG | - | chr5.4:21367279-21367298 | None:intergenic | 50.0% | |
| GGCACAAATCGTACCACGAT+TGG | + | chr5.4:21369021-21369040 | MS.gene070871:intron | 50.0% | |
| GTTGGAGACAAAGTGGGTGT+GGG | + | chr5.4:21367762-21367781 | MS.gene070871:CDS | 50.0% | |
| TCGCGCATGCCAAAATTGTG+AGG | + | chr5.4:21367803-21367822 | MS.gene070871:CDS | 50.0% | |
| TGGTACGATTTGTGCCATCG+TGG | - | chr5.4:21369017-21369036 | None:intergenic | 50.0% | |
| ! | AGAGTACCCTCCATACGTGA+TGG | - | chr5.4:21367892-21367911 | None:intergenic | 50.0% |
| ! | ATATCTGGCAGTGGCATTGG+AGG | + | chr5.4:21369800-21369819 | MS.gene070871:CDS | 50.0% |
| ! | GTACCCAGGAACTAGTGGAT+AGG | - | chr5.4:21367592-21367611 | None:intergenic | 50.0% |
| ! | GTGCCATCGTGGTACGATTT+TGG | - | chr5.4:21369006-21369025 | None:intergenic | 50.0% |
| !! | CTTGGTGGACTTGGTCACTT+GGG | + | chr5.4:21368068-21368087 | MS.gene070871:CDS | 50.0% |
| !! | TCTTGGTGGACTTGGTCACT+TGG | + | chr5.4:21368067-21368086 | MS.gene070871:CDS | 50.0% |
| !! | TGGAGGGTACTCTGACTCAA+TGG | + | chr5.4:21367899-21367918 | MS.gene070871:CDS | 50.0% |
| AGAGGAGCAGCAGCTTCAAG+TGG | - | chr5.4:21367966-21367985 | None:intergenic | 55.0% | |
| CGCCCAAAATCGTACCACGA+TGG | + | chr5.4:21369000-21369019 | MS.gene070871:intron | 55.0% | |
| GCTGCGATGGGTACTTTGGA+TGG | + | chr5.4:21369473-21369492 | MS.gene070871:intron | 55.0% | |
| TAACACCCAGAAGGCTGCAG+CGG | - | chr5.4:21368903-21368922 | None:intergenic | 55.0% | |
| TGGGCAGCAAGAGACACTTC+TGG | + | chr5.4:21367294-21367313 | MS.gene070871:CDS | 55.0% | |
| GCTGCTCCTCTCCTTTGTGC+TGG | + | chr5.4:21367975-21367994 | MS.gene070871:CDS | 60.0% | |
| CCTCTCCGCTGCAGCCTTCT+GGG | + | chr5.4:21368895-21368914 | MS.gene070871:intron | 65.0% | |
| GGAATGTGAGGGAGCTCCGG+AGG | - | chr5.4:21369596-21369615 | None:intergenic | 65.0% | |
| TCCTCTCCGCTGCAGCCTTC+TGG | + | chr5.4:21368894-21368913 | MS.gene070871:intron | 65.0% | |
| CCCAGAAGGCTGCAGCGGAG+AGG | - | chr5.4:21368898-21368917 | None:intergenic | 70.0% | |
| GGGAGCTCCGGAGGCTTCTC+AGG | - | chr5.4:21369587-21369606 | None:intergenic | 70.0% | |
| ! | CGGGGCACCTGAGAAGCCTC+CGG | + | chr5.4:21369577-21369596 | MS.gene070871:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 21367249 | 21369994 | 21367249 | ID=MS.gene070871 |
| chr5.4 | mRNA | 21367249 | 21369994 | 21367249 | ID=MS.gene070871.t1;Parent=MS.gene070871 |
| chr5.4 | exon | 21367249 | 21367346 | 21367249 | ID=MS.gene070871.t1.exon1;Parent=MS.gene070871.t1 |
| chr5.4 | CDS | 21367249 | 21367346 | 21367249 | ID=cds.MS.gene070871.t1;Parent=MS.gene070871.t1 |
| chr5.4 | exon | 21367494 | 21367607 | 21367494 | ID=MS.gene070871.t1.exon2;Parent=MS.gene070871.t1 |
| chr5.4 | CDS | 21367494 | 21367607 | 21367494 | ID=cds.MS.gene070871.t1;Parent=MS.gene070871.t1 |
| chr5.4 | exon | 21367707 | 21368161 | 21367707 | ID=MS.gene070871.t1.exon3;Parent=MS.gene070871.t1 |
| chr5.4 | CDS | 21367707 | 21368161 | 21367707 | ID=cds.MS.gene070871.t1;Parent=MS.gene070871.t1 |
| chr5.4 | exon | 21369327 | 21369365 | 21369327 | ID=MS.gene070871.t1.exon4;Parent=MS.gene070871.t1 |
| chr5.4 | CDS | 21369327 | 21369365 | 21369327 | ID=cds.MS.gene070871.t1;Parent=MS.gene070871.t1 |
| chr5.4 | exon | 21369510 | 21369626 | 21369510 | ID=MS.gene070871.t1.exon5;Parent=MS.gene070871.t1 |
| chr5.4 | CDS | 21369510 | 21369626 | 21369510 | ID=cds.MS.gene070871.t1;Parent=MS.gene070871.t1 |
| chr5.4 | exon | 21369789 | 21369994 | 21369789 | ID=MS.gene070871.t1.exon6;Parent=MS.gene070871.t1 |
| chr5.4 | CDS | 21369789 | 21369994 | 21369789 | ID=cds.MS.gene070871.t1;Parent=MS.gene070871.t1 |
| Gene Sequence |
| Protein sequence |
