Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06691.t1 | XP_003602279.2 | 90.1 | 563 | 56 | 0 | 1 | 563 | 1 | 563 | 6.00E-139 | 504.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06691.t1 | G7J7G9 | 90.1 | 563 | 56 | 0 | 1 | 563 | 1 | 563 | 4.3e-139 | 504.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene06691 | 0.836239 | 1.05E-56 | -1.69E-46 |
| MS.gene049151 | MS.gene06691 | 0.819704 | 1.01E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene06691 | 0.84157 | 4.39E-58 | -1.69E-46 |
| MS.gene049260 | MS.gene06691 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene06691 | 0.857918 | 1.18E-62 | -1.69E-46 |
| MS.gene04933 | MS.gene06691 | 0.828496 | 8.71E-55 | -1.69E-46 |
| MS.gene049346 | MS.gene06691 | 0.816865 | 4.44E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene06691 | 0.850007 | 2.24E-60 | -1.69E-46 |
| MS.gene049426 | MS.gene06691 | 0.829793 | 4.22E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene06691 | 0.876968 | 9.16E-69 | -1.69E-46 |
| MS.gene049910 | MS.gene06691 | 0.836094 | 1.14E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene06691 | 0.800037 | 1.74E-48 | -1.69E-46 |
| MS.gene050099 | MS.gene06691 | 0.838282 | 3.16E-57 | -1.69E-46 |
| MS.gene050168 | MS.gene06691 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene06691 | 0.832783 | 7.76E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene06691 | 0.831762 | 1.39E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene06691 | 0.822055 | 2.91E-53 | -1.69E-46 |
| MS.gene050231 | MS.gene06691 | 0.807025 | 6.18E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene06691 | 0.887443 | 1.42E-72 | -1.69E-46 |
| MS.gene050319 | MS.gene06691 | -0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene06691 | -0.806084 | 9.77E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene06691 | 0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene06691 | 0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene050516 | MS.gene06691 | 0.825971 | 3.50E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene06691 | 0.823234 | 1.55E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene06691 | 0.880481 | 5.30E-70 | -1.69E-46 |
| MS.gene050560 | MS.gene06691 | 0.84626 | 2.43E-59 | -1.69E-46 |
| MS.gene050642 | MS.gene06691 | 0.844384 | 7.82E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene06691 | 0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene06691 | 0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene06691 | 0.843493 | 1.35E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene06691 | 0.84452 | 7.19E-59 | -1.69E-46 |
| MS.gene05119 | MS.gene06691 | -0.803397 | 3.55E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene06691 | 0.845096 | 5.02E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene06691 | 0.846813 | 1.72E-59 | -1.69E-46 |
| MS.gene051662 | MS.gene06691 | 0.844535 | 7.12E-59 | -1.69E-46 |
| MS.gene051663 | MS.gene06691 | 0.870135 | 1.83E-66 | -1.69E-46 |
| MS.gene051860 | MS.gene06691 | 0.873766 | 1.14E-67 | -1.69E-46 |
| MS.gene051983 | MS.gene06691 | 0.842895 | 1.96E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene06691 | -0.834104 | 3.63E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene06691 | 0.830908 | 2.25E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene06691 | 0.809511 | 1.82E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene06691 | 0.841068 | 5.95E-58 | -1.69E-46 |
| MS.gene052207 | MS.gene06691 | 0.853599 | 2.15E-61 | -1.69E-46 |
| MS.gene052253 | MS.gene06691 | 0.844035 | 9.70E-59 | -1.69E-46 |
| MS.gene052255 | MS.gene06691 | 0.811296 | 7.52E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene06691 | 0.828397 | 9.20E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene06691 | 0.819876 | 9.23E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene06691 | 0.820652 | 6.12E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene06691 | 0.80136 | 9.34E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene06691 | 0.831904 | 1.28E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene06691 | 0.801571 | 8.46E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene06691 | 0.912261 | 2.38E-83 | -1.69E-46 |
| MS.gene053907 | MS.gene06691 | 0.834948 | 2.23E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene06691 | 0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene06691 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene06691 | 0.80131 | 9.57E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene06691 | 0.811823 | 5.77E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene06691 | 0.826603 | 2.48E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene06691 | 0.863519 | 2.35E-64 | -1.69E-46 |
| MS.gene05455 | MS.gene06691 | 0.867257 | 1.56E-65 | -1.69E-46 |
| MS.gene054667 | MS.gene06691 | 0.804821 | 1.80E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene06691 | 0.803155 | 3.99E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene06691 | 0.824369 | 8.38E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene06691 | 0.873748 | 1.16E-67 | -1.69E-46 |
| MS.gene054983 | MS.gene06691 | 0.854295 | 1.35E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene06691 | 0.80164 | 8.19E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene06691 | 0.847977 | 8.22E-60 | -1.69E-46 |
| MS.gene055303 | MS.gene06691 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene06691 | 0.874145 | 8.49E-68 | -1.69E-46 |
| MS.gene055422 | MS.gene06691 | 0.877877 | 4.42E-69 | -1.69E-46 |
| MS.gene055428 | MS.gene06691 | 0.881251 | 2.80E-70 | -1.69E-46 |
| MS.gene05553 | MS.gene06691 | 0.819472 | 1.14E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene06691 | 0.835873 | 1.30E-56 | -1.69E-46 |
| MS.gene055712 | MS.gene06691 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene06691 | 0.827617 | 1.42E-54 | -1.69E-46 |
| MS.gene056451 | MS.gene06691 | 0.818818 | 1.61E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene06691 | 0.862191 | 6.03E-64 | -1.69E-46 |
| MS.gene056659 | MS.gene06691 | 0.801187 | 1.01E-48 | -1.69E-46 |
| MS.gene056723 | MS.gene06691 | 0.834853 | 2.36E-56 | -1.69E-46 |
| MS.gene056846 | MS.gene06691 | 0.814086 | 1.84E-51 | -1.69E-46 |
| MS.gene056875 | MS.gene06691 | 0.822345 | 2.49E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene06691 | -0.809266 | 2.06E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene06691 | 0.840823 | 6.90E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene06691 | 0.827503 | 1.51E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene06691 | 0.987421 | 3.39E-170 | -1.69E-46 |
| MS.gene057245 | MS.gene06691 | 0.870201 | 1.75E-66 | -1.69E-46 |
| MS.gene057260 | MS.gene06691 | 0.823765 | 1.16E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene06691 | 0.832554 | 8.85E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene06691 | 0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene06691 | 0.809352 | 1.97E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene06691 | 0.855029 | 8.30E-62 | -1.69E-46 |
| MS.gene058002 | MS.gene06691 | 0.898627 | 4.41E-77 | -1.69E-46 |
| MS.gene05811 | MS.gene06691 | 0.89222 | 1.94E-74 | -1.69E-46 |
| MS.gene058142 | MS.gene06691 | 0.866713 | 2.33E-65 | -1.69E-46 |
| MS.gene058233 | MS.gene06691 | 0.839658 | 1.39E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene06691 | 0.846511 | 2.07E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene06691 | 0.806608 | 7.58E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene06691 | 0.857245 | 1.86E-62 | -1.69E-46 |
| MS.gene058710 | MS.gene06691 | 0.820129 | 8.07E-53 | -1.69E-46 |
| MS.gene058739 | MS.gene06691 | 0.814004 | 1.92E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene06691 | 0.846565 | 2.01E-59 | -1.69E-46 |
| MS.gene058833 | MS.gene06691 | 0.83543 | 1.69E-56 | -1.69E-46 |
| MS.gene058845 | MS.gene06691 | 0.839061 | 1.98E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene06691 | 0.84491 | 5.64E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene06691 | 0.892041 | 2.29E-74 | -1.69E-46 |
| MS.gene059247 | MS.gene06691 | 0.805198 | 1.50E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene06691 | 0.833371 | 5.54E-56 | -1.69E-46 |
| MS.gene059518 | MS.gene06691 | 0.852482 | 4.49E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene06691 | 0.829607 | 4.68E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene06691 | 0.804917 | 1.72E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene06691 | 0.81079 | 9.68E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene06691 | 0.815824 | 7.59E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene06691 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene06691 | 0.886874 | 2.34E-72 | -1.69E-46 |
| MS.gene059894 | MS.gene06691 | 0.835431 | 1.68E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene06691 | 0.811688 | 6.18E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene06691 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene06691 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene06691 | 0.80424 | 2.38E-49 | -1.69E-46 |
| MS.gene060994 | MS.gene06691 | 0.825285 | 5.09E-54 | -1.69E-46 |
| MS.gene061000 | MS.gene06691 | 0.82444 | 8.06E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene06691 | 0.859312 | 4.51E-63 | -1.69E-46 |
| MS.gene061114 | MS.gene06691 | -0.8188 | 1.62E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene06691 | 0.803523 | 3.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06691.t1 | MTR_3g091780 | 94.858 | 564 | 29 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1050 |
| MS.gene06691.t1 | MTR_3g091780 | 95.815 | 454 | 19 | 0 | 111 | 564 | 1 | 454 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06691.t1 | AT5G53080 | 57.955 | 528 | 220 | 1 | 39 | 564 | 37 | 564 | 0.0 | 600 |
Find 110 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTCTTTCATTGGATTC+AGG | 0.207485 | 3.3:-76474398 | MS.gene06691:intron |
| ATGTGGTGCATCGTCCTTTA+AGG | 0.225818 | 3.3:+76473153 | None:intergenic |
| GCTGAATTACTCCATACTTC+TGG | 0.251548 | 3.3:-76472067 | MS.gene06691:CDS |
| ATCCTTTCTCTTGGATAATC+AGG | 0.268976 | 3.3:+76471338 | None:intergenic |
| GGAGAAAATGATGGAAGAAT+TGG | 0.269813 | 3.3:-76472408 | MS.gene06691:CDS |
| TACATTGTGGAGAGGATTTA+TGG | 0.277215 | 3.3:-76473043 | MS.gene06691:intron |
| CCAGCATGTAATCACTCTTT+TGG | 0.280025 | 3.3:-76472662 | MS.gene06691:CDS |
| TATTCTTGTTACGCCTCATT+TGG | 0.281152 | 3.3:-76472740 | MS.gene06691:CDS |
| CGCATCCGTGAAAAGGCATT+TGG | 0.302103 | 3.3:-76471618 | MS.gene06691:CDS |
| AGAAGTTGTTGATACCTTAA+AGG | 0.303730 | 3.3:-76473167 | MS.gene06691:CDS |
| GTTCCATCACCCTCTTTCAT+TGG | 0.314733 | 3.3:-76474405 | MS.gene06691:CDS |
| GCAAAAGCTCTTGGTTCAAT+TGG | 0.329290 | 3.3:-76472712 | MS.gene06691:CDS |
| AACATATACACAAAAGTATA+TGG | 0.333209 | 3.3:-76472429 | MS.gene06691:CDS |
| ATTTGCATTAAGCAGGTCTA+TGG | 0.343466 | 3.3:+76473842 | None:intergenic |
| TTTATTCAAACGTGCTCTTA+AGG | 0.344816 | 3.3:-76472155 | MS.gene06691:CDS |
| AGATTCAATACTTATGCATA+TGG | 0.358609 | 3.3:-76473128 | MS.gene06691:CDS |
| CATATTAGCACTTGGTTACA+TGG | 0.361389 | 3.3:-76473754 | MS.gene06691:CDS |
| AAGCTTACCTCCCAGAAGTA+TGG | 0.367519 | 3.3:+76472056 | None:intergenic |
| CGGCTTAATGCTGGCACTAA+AGG | 0.370326 | 3.3:-76473801 | MS.gene06691:CDS |
| AAAATGACTTTCTGCATCAT+TGG | 0.373578 | 3.3:+76472558 | None:intergenic |
| CAGCAACTTTGAGAAAGAAT+TGG | 0.381841 | 3.3:-76473919 | MS.gene06691:CDS |
| ATTCTTGTTACGCCTCATTT+GGG | 0.384347 | 3.3:-76472739 | MS.gene06691:CDS |
| ATGCATGTCAGGGGAGGCTT+TGG | 0.385246 | 3.3:-76471431 | MS.gene06691:intron |
| TGTTGGTTATCTGTTAAATT+CGG | 0.389764 | 3.3:-76473712 | MS.gene06691:intron |
| AAGATCTTTCGCGAAGTCAT+TGG | 0.390737 | 3.3:-76474103 | MS.gene06691:CDS |
| AGGTGCTGAAAGTAAGGATT+TGG | 0.391390 | 3.3:-76472629 | MS.gene06691:CDS |
| CTGAATTACTCCATACTTCT+GGG | 0.392390 | 3.3:-76472066 | MS.gene06691:CDS |
| GAAGCTAGAAATGGTCCTAA+TGG | 0.393809 | 3.3:+76474134 | None:intergenic |
| GTTGTACCTTTACTTAGTCT+TGG | 0.402641 | 3.3:-76472607 | MS.gene06691:CDS |
| TATCATGTGTGTTGCTAAGC+TGG | 0.404372 | 3.3:+76471836 | None:intergenic |
| ACTGTCATCTTTACCAAGTC+TGG | 0.409745 | 3.3:+76471387 | None:intergenic |
| GTATACTGCTTAGATAAGTT+AGG | 0.419637 | 3.3:-76471271 | MS.gene06691:CDS |
| CATGTCCGAATCCTTTCTCT+TGG | 0.428885 | 3.3:+76471329 | None:intergenic |
| CACCTCTGATTATCTTCGTC+GGG | 0.429167 | 3.3:+76474030 | None:intergenic |
| GTCACCGGAGAACAGTATAA+TGG | 0.436670 | 3.3:-76472110 | MS.gene06691:CDS |
| TGTACCTCTCTGTAATCAAT+AGG | 0.440395 | 3.3:+76471874 | None:intergenic |
| TTTCATAATTTGCATTAAGC+AGG | 0.445985 | 3.3:+76473835 | None:intergenic |
| TTCGCGAAGTCATTGGAACT+TGG | 0.446451 | 3.3:-76474096 | MS.gene06691:CDS |
| AGAAGGAAGAGAGATATTAG+AGG | 0.448038 | 3.3:-76471901 | MS.gene06691:CDS |
| AAATAGAGGTGCTGAAAGTA+AGG | 0.452020 | 3.3:-76472635 | MS.gene06691:CDS |
| AAGCTAGAAATGGTCCTAAT+GGG | 0.455185 | 3.3:+76474135 | None:intergenic |
| GCACGGATAACCTTCTCTGC+AGG | 0.465290 | 3.3:+76471227 | None:intergenic |
| TTGGGTATGGCAAAAGCTCT+TGG | 0.466663 | 3.3:-76472721 | MS.gene06691:CDS |
| CACGGATGCGTAAAACCTCC+AGG | 0.470890 | 3.3:+76471631 | None:intergenic |
| TAGGAAGAAATATAAGCATA+TGG | 0.476228 | 3.3:-76471203 | MS.gene06691:CDS |
| AGAGGGTGATGGAACAAAAC+AGG | 0.480276 | 3.3:+76474413 | None:intergenic |
| TGAAATGCAGAAGCTAGAAA+TGG | 0.483695 | 3.3:+76474125 | None:intergenic |
| GTGAAAGAGCGGCTTAATGC+TGG | 0.485836 | 3.3:-76473810 | MS.gene06691:CDS |
| ATTATCCAAGAGAAAGGATT+CGG | 0.491963 | 3.3:-76471334 | MS.gene06691:CDS |
| TGTTACGCCTCATTTGGGTA+TGG | 0.497153 | 3.3:-76472734 | MS.gene06691:CDS |
| AAAGAATTGGAGGAATTGTT+CGG | 0.497560 | 3.3:-76473906 | MS.gene06691:CDS |
| GTAGCTGCAAGTTGCAACAT+AGG | 0.503628 | 3.3:+76471696 | None:intergenic |
| TCATTGGAACTTGGAGGGAC+AGG | 0.505021 | 3.3:-76474087 | MS.gene06691:CDS |
| GATTCAATACTTATGCATAT+GGG | 0.505489 | 3.3:-76473127 | MS.gene06691:CDS |
| GCACTTGGTTACATGGCTGT+TGG | 0.509178 | 3.3:-76473747 | MS.gene06691:CDS |
| GCTTAATGCAAATTATGAAA+TGG | 0.511993 | 3.3:-76473832 | MS.gene06691:CDS |
| CTTATATTTCTTCCTAAGCA+CGG | 0.513677 | 3.3:+76471210 | None:intergenic |
| CAACTTTGAGAAAGAATTGG+AGG | 0.515276 | 3.3:-76473916 | MS.gene06691:CDS |
| AGAGAAGGTTATCCGTGCTT+AGG | 0.516989 | 3.3:-76471222 | MS.gene06691:CDS |
| GAACAAATTTGAAGACTCAC+TGG | 0.521362 | 3.3:-76473086 | MS.gene06691:CDS |
| GGAGATCATTCTCTTCCTGT+TGG | 0.521643 | 3.3:-76471597 | MS.gene06691:intron |
| AAAGTATATGGAGAAAATGA+TGG | 0.522288 | 3.3:-76472417 | MS.gene06691:CDS |
| GCTCAAGTGAAGTGTGCTCT+AGG | 0.526312 | 3.3:-76472366 | MS.gene06691:intron |
| ATCTCGCAGCTTCGTACACA+CGG | 0.526830 | 3.3:-76471812 | MS.gene06691:CDS |
| ATCCTGATTATCCAAGAGAA+AGG | 0.530040 | 3.3:-76471340 | MS.gene06691:CDS |
| AAAAGCTTCCCCTGCAGAGA+AGG | 0.530458 | 3.3:-76471237 | MS.gene06691:CDS |
| ATCATGTGTGTTGCTAAGCT+GGG | 0.537536 | 3.3:+76471837 | None:intergenic |
| AGCTATACATTATACCCATT+AGG | 0.542016 | 3.3:-76474149 | MS.gene06691:CDS |
| GCGAAGTCATTGGAACTTGG+AGG | 0.542669 | 3.3:-76474093 | MS.gene06691:CDS |
| CTCACTGGACACATATCAAA+GGG | 0.542709 | 3.3:-76473071 | MS.gene06691:CDS |
| GTTGGAGACTTGAAGTATGT+TGG | 0.543920 | 3.3:-76473729 | MS.gene06691:CDS |
| CAGTATAATGGAAAAGATGA+GGG | 0.546450 | 3.3:-76472098 | MS.gene06691:CDS |
| TAGCTGCAAGTTGCAACATA+GGG | 0.546816 | 3.3:+76471697 | None:intergenic |
| GAACCTGAATCCAATGAAAG+AGG | 0.550486 | 3.3:+76474395 | None:intergenic |
| GTGTCTATTCAAGCCAGACT+TGG | 0.550978 | 3.3:-76471400 | MS.gene06691:CDS |
| ACAGTATAATGGAAAAGATG+AGG | 0.554987 | 3.3:-76472099 | MS.gene06691:CDS |
| CACGGATAACCTTCTCTGCA+GGG | 0.555081 | 3.3:+76471228 | None:intergenic |
| ATTCGGACATGAGAGTGAGC+AGG | 0.562524 | 3.3:-76471317 | MS.gene06691:CDS |
| AGAAGCAGAGAAACTCGCCC+TGG | 0.567980 | 3.3:-76471649 | MS.gene06691:CDS |
| CGAAGTCATTGGAACTTGGA+GGG | 0.570572 | 3.3:-76474092 | MS.gene06691:CDS |
| TACAGAGAGGTACAAAGGAA+AGG | 0.570695 | 3.3:-76471865 | MS.gene06691:CDS |
| ACATAGGGAAGCTGATGGAC+TGG | 0.571586 | 3.3:+76471712 | None:intergenic |
| ACGTGCTCTTAAGGTCATGA+AGG | 0.572087 | 3.3:-76472146 | MS.gene06691:CDS |
| CTTACTTCAAGAGGACAAGA+AGG | 0.574909 | 3.3:-76471918 | MS.gene06691:intron |
| CCAAAAGAGTGATTACATGC+TGG | 0.579083 | 3.3:+76472662 | None:intergenic |
| AAATGATGGAAGAATTGGAA+TGG | 0.582126 | 3.3:-76472403 | MS.gene06691:CDS |
| ACACCTCTGATTATCTTCGT+CGG | 0.583628 | 3.3:+76474029 | None:intergenic |
| CAAATCATGATAAAGCATAA+CGG | 0.586673 | 3.3:-76471744 | MS.gene06691:CDS |
| AATCCAATGAAAGAGGGTGA+TGG | 0.596105 | 3.3:+76474402 | None:intergenic |
| GGACTCAAATTACATGTCAC+CGG | 0.596445 | 3.3:-76472125 | MS.gene06691:CDS |
| TGCTGGCACTAAAGGCATAG+AGG | 0.599485 | 3.3:-76473793 | MS.gene06691:CDS |
| ACTCACTGGACACATATCAA+AGG | 0.601175 | 3.3:-76473072 | MS.gene06691:CDS |
| TTGCAACATAGGGAAGCTGA+TGG | 0.612312 | 3.3:+76471707 | None:intergenic |
| AACCTGAATCCAATGAAAGA+GGG | 0.613573 | 3.3:+76474396 | None:intergenic |
| TCAAAGGGCTGTCTACATTG+TGG | 0.614616 | 3.3:-76473056 | MS.gene06691:CDS |
| TCTTGCAATGAGAGAGCATG+TGG | 0.623593 | 3.3:+76474228 | None:intergenic |
| AGATTGCCAAGACTAAGTAA+AGG | 0.624430 | 3.3:+76472601 | None:intergenic |
| TTGATTACAGAGAGGTACAA+AGG | 0.629542 | 3.3:-76471870 | MS.gene06691:CDS |
| AGCAGAGAAACTCGCCCTGG+AGG | 0.648249 | 3.3:-76471646 | MS.gene06691:CDS |
| ACGGATAACCTTCTCTGCAG+GGG | 0.654802 | 3.3:+76471229 | None:intergenic |
| CTCCCGACGAAGATAATCAG+AGG | 0.658761 | 3.3:-76474032 | MS.gene06691:intron |
| ATTATGAAATGGTGAAAGAG+CGG | 0.664891 | 3.3:-76473821 | MS.gene06691:CDS |
| GGGCTGTCTACATTGTGGAG+AGG | 0.670249 | 3.3:-76473051 | MS.gene06691:CDS |
| ACGGATGCGTAAAACCTCCA+GGG | 0.672923 | 3.3:+76471632 | None:intergenic |
| GCATATGGGAAATATGTATG+CGG | 0.687958 | 3.3:-76473113 | MS.gene06691:CDS |
| TGGCACTAAAGGCATAGAGG+AGG | 0.696456 | 3.3:-76473790 | MS.gene06691:CDS |
| ATAAGTATTGAATCTAGATG+TGG | 0.709685 | 3.3:+76473136 | None:intergenic |
| ACGGTCAAAGAATTATGCAG+AGG | 0.715366 | 3.3:-76471793 | MS.gene06691:CDS |
| AATTACTCCATACTTCTGGG+AGG | 0.730279 | 3.3:-76472063 | MS.gene06691:intron |
| AGTGCCTATTGATTACAGAG+AGG | 0.754196 | 3.3:-76471878 | MS.gene06691:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | + | chr3.3:76473354-76473373 | None:intergenic | 0.0% |
| !! | ATATATTGTATATCAATAAG+TGG | + | chr3.3:76473413-76473432 | None:intergenic | 15.0% |
| !!! | ATATACAATATATTTTTGCA+GGG | - | chr3.3:76473420-76473439 | MS.gene06691:intron | 15.0% |
| !!! | TTATTTATTGTTTTTCACTA+GGG | - | chr3.3:76473161-76473180 | MS.gene06691:CDS | 15.0% |
| !! | AAGAATTATAATGTGAATAC+CGG | + | chr3.3:76472838-76472857 | None:intergenic | 20.0% |
| !! | ACTAATACACTAAATATTGA+AGG | + | chr3.3:76473115-76473134 | None:intergenic | 20.0% |
| !! | AGTGAAAAAAATGATTAAGA+TGG | - | chr3.3:76471738-76471757 | MS.gene06691:CDS | 20.0% |
| !! | ATTGAAGGAGAAAAAAAATT+AGG | + | chr3.3:76473100-76473119 | None:intergenic | 20.0% |
| !! | GTGAAAAAAATGATTAAGAT+GGG | - | chr3.3:76471739-76471758 | MS.gene06691:CDS | 20.0% |
| !!! | AACATATACACAAAAGTATA+TGG | - | chr3.3:76473189-76473208 | MS.gene06691:intron | 20.0% |
| !!! | AGCAGTATACAATTTTTTTA+AGG | + | chr3.3:76474337-76474356 | None:intergenic | 20.0% |
| !!! | CACATTATAATTCTTCTTTT+AGG | - | chr3.3:76472843-76472862 | MS.gene06691:intron | 20.0% |
| !!! | CTTATTTATTGTTTTTCACT+AGG | - | chr3.3:76473160-76473179 | MS.gene06691:CDS | 20.0% |
| !!! | GATATACAATATATTTTTGC+AGG | - | chr3.3:76473419-76473438 | MS.gene06691:intron | 20.0% |
| !!! | GCAGTATACAATTTTTTTAA+GGG | + | chr3.3:76474336-76474355 | None:intergenic | 20.0% |
| !!! | TATAATTCTTCTTTTAGGTA+AGG | - | chr3.3:76472848-76472867 | MS.gene06691:intron | 20.0% |
| !!! | TTTTTGTACAATGAGAATAA+AGG | - | chr3.3:76472134-76472153 | MS.gene06691:CDS | 20.0% |
| ! | AAAGTATATGGAGAAAATGA+TGG | - | chr3.3:76473201-76473220 | MS.gene06691:intron | 25.0% |
| ! | AACATGAAAAACATTGCTAA+CGG | + | chr3.3:76472614-76472633 | None:intergenic | 25.0% |
| ! | ACATATGGAATTTGAAAAGA+AGG | + | chr3.3:76471248-76471267 | None:intergenic | 25.0% |
| ! | ACTTAAGAATCCAGATTTAT+TGG | - | chr3.3:76472094-76472113 | MS.gene06691:CDS | 25.0% |
| ! | AGATTCAATACTTATGCATA+TGG | - | chr3.3:76472490-76472509 | MS.gene06691:intron | 25.0% |
| ! | ATGTTATCTGTTCTTCTATT+AGG | - | chr3.3:76471352-76471371 | MS.gene06691:CDS | 25.0% |
| ! | ATTCTCATTGTACAAAAATC+TGG | + | chr3.3:76472132-76472151 | None:intergenic | 25.0% |
| ! | ATTGTATATTATGCATGTCA+GGG | - | chr3.3:76474177-76474196 | MS.gene06691:CDS | 25.0% |
| ! | CAAATCATGATAAAGCATAA+CGG | - | chr3.3:76473874-76473893 | MS.gene06691:CDS | 25.0% |
| ! | GATTCAATACTTATGCATAT+GGG | - | chr3.3:76472491-76472510 | MS.gene06691:intron | 25.0% |
| ! | GATTTGACTGCATATATTAT+TGG | + | chr3.3:76472246-76472265 | None:intergenic | 25.0% |
| ! | GCTTAATGCAAATTATGAAA+TGG | - | chr3.3:76471786-76471805 | MS.gene06691:CDS | 25.0% |
| ! | GTTAAGCTTGAATGAATAAA+CGG | - | chr3.3:76472217-76472236 | MS.gene06691:intron | 25.0% |
| ! | TAAAGCAAGAGTAAAACATA+TGG | + | chr3.3:76471263-76471282 | None:intergenic | 25.0% |
| ! | TAGAGCTATTATAAACTTCA+GGG | + | chr3.3:76474081-76474100 | None:intergenic | 25.0% |
| ! | TAGGAAGAAATATAAGCATA+TGG | - | chr3.3:76474415-76474434 | MS.gene06691:CDS | 25.0% |
| !! | AATTGTTGTTAAAATGCATC+TGG | - | chr3.3:76472321-76472340 | MS.gene06691:intron | 25.0% |
| !! | TGTTGGTTATCTGTTAAATT+CGG | - | chr3.3:76471906-76471925 | MS.gene06691:CDS | 25.0% |
| !! | TTTCATAATTTGCATTAAGC+AGG | + | chr3.3:76471786-76471805 | None:intergenic | 25.0% |
| !!! | AAATAATAACAAGAGTGCTA+TGG | + | chr3.3:76472698-76472717 | None:intergenic | 25.0% |
| !!! | ATAAGTATTGAATCTAGATG+TGG | + | chr3.3:76472485-76472504 | None:intergenic | 25.0% |
| !!! | ATTTACCGACATTTTTCAAT+TGG | - | chr3.3:76472714-76472733 | MS.gene06691:CDS | 25.0% |
| !!! | CTTCTTCATCATTTTTCAAA+TGG | + | chr3.3:76473954-76473973 | None:intergenic | 25.0% |
| !!! | GATGCATTTTAACAACAATT+TGG | + | chr3.3:76472321-76472340 | None:intergenic | 25.0% |
| !!! | TTTACCGACATTTTTCAATT+GGG | - | chr3.3:76472715-76472734 | MS.gene06691:CDS | 25.0% |
| AAAAAAGGAAAGAAAAACCC+AGG | + | chr3.3:76473340-76473359 | None:intergenic | 30.0% | |
| AAAAAGGAAAGAAAAACCCA+GGG | + | chr3.3:76473339-76473358 | None:intergenic | 30.0% | |
| AAAATGACTTTCTGCATCAT+TGG | + | chr3.3:76473063-76473082 | None:intergenic | 30.0% | |
| AAAGAATTGGAGGAATTGTT+CGG | - | chr3.3:76471712-76471731 | MS.gene06691:CDS | 30.0% | |
| AGAAGTTGTTGATACCTTAA+AGG | - | chr3.3:76472451-76472470 | MS.gene06691:intron | 30.0% | |
| AGCTATACATTATACCCATT+AGG | - | chr3.3:76471469-76471488 | MS.gene06691:intron | 30.0% | |
| ATCAACAACTTCTTTCAACT+GGG | + | chr3.3:76472444-76472463 | None:intergenic | 30.0% | |
| ATGAACAACTATCAAGAGTT+GGG | + | chr3.3:76471295-76471314 | None:intergenic | 30.0% | |
| ATTATCCAAGAGAAAGGATT+CGG | - | chr3.3:76474284-76474303 | MS.gene06691:intron | 30.0% | |
| ATTATGAAATGGTGAAAGAG+CGG | - | chr3.3:76471797-76471816 | MS.gene06691:CDS | 30.0% | |
| ATTATTCAGATGATCCTGTT+TGG | - | chr3.3:76474108-76474127 | MS.gene06691:CDS | 30.0% | |
| CAATCAATGTCAGTTTCATA+AGG | + | chr3.3:76474161-76474180 | None:intergenic | 30.0% | |
| CAGATTTATTGGATGATCAT+AGG | - | chr3.3:76472105-76472124 | MS.gene06691:CDS | 30.0% | |
| CTAGAGCTATTATAAACTTC+AGG | + | chr3.3:76474082-76474101 | None:intergenic | 30.0% | |
| CTAGGTAACTTCATAATTAC+CGG | - | chr3.3:76473270-76473289 | MS.gene06691:intron | 30.0% | |
| CTATGATCATCCAATAAATC+TGG | + | chr3.3:76472107-76472126 | None:intergenic | 30.0% | |
| CTTATATTTCTTCCTAAGCA+CGG | + | chr3.3:76474411-76474430 | None:intergenic | 30.0% | |
| GAAAATATGCTTGTAAGACA+AGG | + | chr3.3:76472278-76472297 | None:intergenic | 30.0% | |
| GATTGTATATTATGCATGTC+AGG | - | chr3.3:76474176-76474195 | MS.gene06691:CDS | 30.0% | |
| GTATACTGCTTAGATAAGTT+AGG | - | chr3.3:76474347-76474366 | MS.gene06691:intron | 30.0% | |
| TACACAGATAATTTCCTCTA+AGG | + | chr3.3:76472790-76472809 | None:intergenic | 30.0% | |
| TATCAACAACTTCTTTCAAC+TGG | + | chr3.3:76472445-76472464 | None:intergenic | 30.0% | |
| TATGAACAACTATCAAGAGT+TGG | + | chr3.3:76471296-76471315 | None:intergenic | 30.0% | |
| TTCAACTAATTCATACCATG+CGG | + | chr3.3:76472003-76472022 | None:intergenic | 30.0% | |
| TTGACTGCATATATTATTGG+TGG | + | chr3.3:76472243-76472262 | None:intergenic | 30.0% | |
| TTGTACAATGAGAATAAAGG+AGG | - | chr3.3:76472137-76472156 | MS.gene06691:CDS | 30.0% | |
| TTGTATATTATGCATGTCAG+GGG | - | chr3.3:76474178-76474197 | MS.gene06691:CDS | 30.0% | |
| TTTATTCAAACGTGCTCTTA+AGG | - | chr3.3:76473463-76473482 | MS.gene06691:intron | 30.0% | |
| ! | AAATGATGGAAGAATTGGAA+TGG | - | chr3.3:76473215-76473234 | MS.gene06691:intron | 30.0% |
| ! | ACAGTATAATGGAAAAGATG+AGG | - | chr3.3:76473519-76473538 | MS.gene06691:intron | 30.0% |
| ! | AGCTTTATAAACTTGGTAGT+AGG | - | chr3.3:76473580-76473599 | MS.gene06691:intron | 30.0% |
| ! | CAGTATAATGGAAAAGATGA+GGG | - | chr3.3:76473520-76473539 | MS.gene06691:intron | 30.0% |
| ! | CTTTTGTTCTCTCTTCAAAT+GGG | - | chr3.3:76473300-76473319 | MS.gene06691:intron | 30.0% |
| ! | TTTTCACTCAATAAGAGAGT+GGG | - | chr3.3:76472643-76472662 | MS.gene06691:CDS | 30.0% |
| ! | TTTTCCATTATACTGTTCTC+CGG | + | chr3.3:76473515-76473534 | None:intergenic | 30.0% |
| ! | TTTTGTTCTCTCTTCAAATG+GGG | - | chr3.3:76473301-76473320 | MS.gene06691:intron | 30.0% |
| !! | GTTTTAGACATATTAGCACT+TGG | - | chr3.3:76471856-76471875 | MS.gene06691:CDS | 30.0% |
| !! | TACCGGAATTTTGAAAAATG+TGG | + | chr3.3:76472821-76472840 | None:intergenic | 30.0% |
| !! | TGCCACATTTTTCAAAATTC+CGG | - | chr3.3:76472816-76472835 | MS.gene06691:intron | 30.0% |
| !!! | ACTCTTTTGGAATCAAATAG+AGG | - | chr3.3:76472969-76472988 | MS.gene06691:intron | 30.0% |
| !!! | ATGCAGAAAGTCATTTTTCT+AGG | - | chr3.3:76473066-76473085 | MS.gene06691:CDS | 30.0% |
| AACCTGAATCCAATGAAAGA+GGG | + | chr3.3:76471225-76471244 | None:intergenic | 35.0% | |
| AAGCTAGAAATGGTCCTAAT+GGG | + | chr3.3:76471486-76471505 | None:intergenic | 35.0% | |
| AGAAGGAAGAGAGATATTAG+AGG | - | chr3.3:76473717-76473736 | MS.gene06691:CDS | 35.0% | |
| AGATTGCCAAGACTAAGTAA+AGG | + | chr3.3:76473020-76473039 | None:intergenic | 35.0% | |
| AGCAAAAGATTAAGACCAAG+AGG | - | chr3.3:76473603-76473622 | MS.gene06691:intron | 35.0% | |
| ATCCTGATTATCCAAGAGAA+AGG | - | chr3.3:76474278-76474297 | MS.gene06691:intron | 35.0% | |
| ATCCTTTCTCTTGGATAATC+AGG | + | chr3.3:76474283-76474302 | None:intergenic | 35.0% | |
| ATGTAACTCAACACTTACTG+TGG | - | chr3.3:76473667-76473686 | MS.gene06691:intron | 35.0% | |
| ATTCTTGTTACGCCTCATTT+GGG | - | chr3.3:76472879-76472898 | MS.gene06691:intron | 35.0% | |
| ATTTGCATTAAGCAGGTCTA+TGG | + | chr3.3:76471779-76471798 | None:intergenic | 35.0% | |
| CATATTAGCACTTGGTTACA+TGG | - | chr3.3:76471864-76471883 | MS.gene06691:CDS | 35.0% | |
| CTGAATTACTCCATACTTCT+GGG | - | chr3.3:76473552-76473571 | MS.gene06691:intron | 35.0% | |
| GAACAAATTTGAAGACTCAC+TGG | - | chr3.3:76472532-76472551 | MS.gene06691:intron | 35.0% | |
| GCATATGGGAAATATGTATG+CGG | - | chr3.3:76472505-76472524 | MS.gene06691:intron | 35.0% | |
| GTATGTGAATGAAACCAAAC+AGG | + | chr3.3:76474125-76474144 | None:intergenic | 35.0% | |
| GTTGTACCTTTACTTAGTCT+TGG | - | chr3.3:76473011-76473030 | MS.gene06691:intron | 35.0% | |
| TACATTGTGGAGAGGATTTA+TGG | - | chr3.3:76472575-76472594 | MS.gene06691:CDS | 35.0% | |
| TATTCTTGTTACGCCTCATT+TGG | - | chr3.3:76472878-76472897 | MS.gene06691:intron | 35.0% | |
| TGAAATGCAGAAGCTAGAAA+TGG | + | chr3.3:76471496-76471515 | None:intergenic | 35.0% | |
| TGTACCTCTCTGTAATCAAT+AGG | + | chr3.3:76473747-76473766 | None:intergenic | 35.0% | |
| TGTGCCCAATTGAAAAATGT+CGG | + | chr3.3:76472722-76472741 | None:intergenic | 35.0% | |
| TTTCTAGACAGATACCTTAG+AGG | - | chr3.3:76472773-76472792 | MS.gene06691:intron | 35.0% | |
| ! | ACTGAAGAGTATACAAGAGA+AGG | + | chr3.3:76471948-76471967 | None:intergenic | 35.0% |
| ! | AGATAATCAGAGGTGTGAAT+TGG | - | chr3.3:76471596-76471615 | MS.gene06691:intron | 35.0% |
| ! | CAACTTTGAGAAAGAATTGG+AGG | - | chr3.3:76471702-76471721 | MS.gene06691:CDS | 35.0% |
| ! | CAGCAACTTTGAGAAAGAAT+TGG | - | chr3.3:76471699-76471718 | MS.gene06691:CDS | 35.0% |
| ! | CTAAGGTATCTGTCTAGAAA+TGG | + | chr3.3:76472773-76472792 | None:intergenic | 35.0% |
| ! | CTGAAGAGTATACAAGAGAA+GGG | + | chr3.3:76471947-76471966 | None:intergenic | 35.0% |
| ! | GCTTTTGTTCTCTCTTCAAA+TGG | - | chr3.3:76473299-76473318 | MS.gene06691:intron | 35.0% |
| ! | GGAGAAAATGATGGAAGAAT+TGG | - | chr3.3:76473210-76473229 | MS.gene06691:intron | 35.0% |
| ! | GGAGGTAAGCTTTATAAACT+TGG | - | chr3.3:76473573-76473592 | MS.gene06691:intron | 35.0% |
| ! | GTTTTCACTCAATAAGAGAG+TGG | - | chr3.3:76472642-76472661 | MS.gene06691:CDS | 35.0% |
| ! | TTGATTACAGAGAGGTACAA+AGG | - | chr3.3:76473748-76473767 | MS.gene06691:CDS | 35.0% |
| !! | AAATAGAGGTGCTGAAAGTA+AGG | - | chr3.3:76472983-76473002 | MS.gene06691:intron | 35.0% |
| AACAACTATCAAGAGTTGGG+TGG | + | chr3.3:76471292-76471311 | None:intergenic | 40.0% | |
| AAGAGGAGTAAGAACACAGT+AGG | - | chr3.3:76473620-76473639 | MS.gene06691:intron | 40.0% | |
| AAGATCTTTCGCGAAGTCAT+TGG | - | chr3.3:76471515-76471534 | MS.gene06691:intron | 40.0% | |
| AATCCAATGAAAGAGGGTGA+TGG | + | chr3.3:76471219-76471238 | None:intergenic | 40.0% | |
| AATCCACACCATAGAGAAAG+TGG | + | chr3.3:76472403-76472422 | None:intergenic | 40.0% | |
| AATTACTCCATACTTCTGGG+AGG | - | chr3.3:76473555-76473574 | MS.gene06691:intron | 40.0% | |
| ACACCTCTGATTATCTTCGT+CGG | + | chr3.3:76471592-76471611 | None:intergenic | 40.0% | |
| ACGGTCAAAGAATTATGCAG+AGG | - | chr3.3:76473825-76473844 | MS.gene06691:CDS | 40.0% | |
| ACTCACTGGACACATATCAA+AGG | - | chr3.3:76472546-76472565 | MS.gene06691:intron | 40.0% | |
| ACTGTCATCTTTACCAAGTC+TGG | + | chr3.3:76474234-76474253 | None:intergenic | 40.0% | |
| ATAAAGGAGGAGTCAGTTGT+TGG | - | chr3.3:76472150-76472169 | MS.gene06691:CDS | 40.0% | |
| CAATAAGAGAGTGGGTGTTA+GGG | - | chr3.3:76472651-76472670 | MS.gene06691:CDS | 40.0% | |
| CCAAAAGAGTGATTACATGC+TGG | + | chr3.3:76472959-76472978 | None:intergenic | 40.0% | |
| CTCACTGGACACATATCAAA+GGG | - | chr3.3:76472547-76472566 | MS.gene06691:intron | 40.0% | |
| CTTACTTCAAGAGGACAAGA+AGG | - | chr3.3:76473700-76473719 | MS.gene06691:intron | 40.0% | |
| CTTCTTGTCCTCTTGAAGTA+AGG | + | chr3.3:76473702-76473721 | None:intergenic | 40.0% | |
| GAACCTGAATCCAATGAAAG+AGG | + | chr3.3:76471226-76471245 | None:intergenic | 40.0% | |
| GAAGCTAGAAATGGTCCTAA+TGG | + | chr3.3:76471487-76471506 | None:intergenic | 40.0% | |
| GAGAGAACAACAACAGAAAG+TGG | + | chr3.3:76472359-76472378 | None:intergenic | 40.0% | |
| GCAAAAGCTCTTGGTTCAAT+TGG | - | chr3.3:76472906-76472925 | MS.gene06691:intron | 40.0% | |
| GCTGAATTACTCCATACTTC+TGG | - | chr3.3:76473551-76473570 | MS.gene06691:intron | 40.0% | |
| GGACTCAAATTACATGTCAC+CGG | - | chr3.3:76473493-76473512 | MS.gene06691:intron | 40.0% | |
| GTTGGAGACTTGAAGTATGT+TGG | - | chr3.3:76471889-76471908 | MS.gene06691:CDS | 40.0% | |
| TACTGTGTTCTTACTCCTCT+TGG | + | chr3.3:76473621-76473640 | None:intergenic | 40.0% | |
| TAGCTGCAAGTTGCAACATA+GGG | + | chr3.3:76473924-76473943 | None:intergenic | 40.0% | |
| TATATTATGCATGTCAGGGG+AGG | - | chr3.3:76474181-76474200 | MS.gene06691:CDS | 40.0% | |
| TCAATAAGAGAGTGGGTGTT+AGG | - | chr3.3:76472650-76472669 | MS.gene06691:CDS | 40.0% | |
| TCCTATTGCCTTACTTCAAG+AGG | - | chr3.3:76473691-76473710 | MS.gene06691:intron | 40.0% | |
| TCCTCTTGAAGTAAGGCAAT+AGG | + | chr3.3:76473695-76473714 | None:intergenic | 40.0% | |
| TGCAGAATTTGCAGAGTCAA+CGG | + | chr3.3:76471668-76471687 | None:intergenic | 40.0% | |
| ! | AAGAGTATACAAGAGAAGGG+TGG | + | chr3.3:76471944-76471963 | None:intergenic | 40.0% |
| ! | AGTGCCTATTGATTACAGAG+AGG | - | chr3.3:76473740-76473759 | MS.gene06691:CDS | 40.0% |
| ! | ATCATGTGTGTTGCTAAGCT+GGG | + | chr3.3:76473784-76473803 | None:intergenic | 40.0% |
| ! | CCAGCATGTAATCACTCTTT+TGG | - | chr3.3:76472956-76472975 | MS.gene06691:intron | 40.0% |
| ! | GAGAAGGGAATTTTACCAAC+AGG | + | chr3.3:76474039-76474058 | None:intergenic | 40.0% |
| ! | GATCTCCAAATGCCTTTTCA+CGG | + | chr3.3:76474008-76474027 | None:intergenic | 40.0% |
| ! | TACAGAGAGGTACAAAGGAA+AGG | - | chr3.3:76473753-76473772 | MS.gene06691:CDS | 40.0% |
| ! | TATCATGTGTGTTGCTAAGC+TGG | + | chr3.3:76473785-76473804 | None:intergenic | 40.0% |
| !! | AGAGAACAAAAGCATCACTC+CGG | + | chr3.3:76473292-76473311 | None:intergenic | 40.0% |
| !! | AGGTGCTGAAAGTAAGGATT+TGG | - | chr3.3:76472989-76473008 | MS.gene06691:intron | 40.0% |
| AAGCTTACCTCCCAGAAGTA+TGG | + | chr3.3:76473565-76473584 | None:intergenic | 45.0% | |
| ACCATAGAGAAAGTGGAGTG+AGG | + | chr3.3:76472396-76472415 | None:intergenic | 45.0% | |
| ACGTGCTCTTAAGGTCATGA+AGG | - | chr3.3:76473472-76473491 | MS.gene06691:intron | 45.0% | |
| ACTCCACTTTCTCTATGGTG+TGG | - | chr3.3:76472397-76472416 | MS.gene06691:CDS | 45.0% | |
| AGAGAAGGTTATCCGTGCTT+AGG | - | chr3.3:76474396-76474415 | MS.gene06691:intron | 45.0% | |
| AGTATACAAGAGAAGGGTGG+AGG | + | chr3.3:76471941-76471960 | None:intergenic | 45.0% | |
| ATGTGGTGCATCGTCCTTTA+AGG | + | chr3.3:76472468-76472487 | None:intergenic | 45.0% | |
| CACCCTCTTTCATTGGATTC+AGG | - | chr3.3:76471220-76471239 | MS.gene06691:CDS | 45.0% | |
| CACCTCTGATTATCTTCGTC+GGG | + | chr3.3:76471591-76471610 | None:intergenic | 45.0% | |
| CATGTCCGAATCCTTTCTCT+TGG | + | chr3.3:76474292-76474311 | None:intergenic | 45.0% | |
| CGAAGTCATTGGAACTTGGA+GGG | - | chr3.3:76471526-76471545 | MS.gene06691:intron | 45.0% | |
| GGAGATCATTCTCTTCCTGT+TGG | - | chr3.3:76474021-76474040 | MS.gene06691:intron | 45.0% | |
| GTAGCTGCAAGTTGCAACAT+AGG | + | chr3.3:76473925-76473944 | None:intergenic | 45.0% | |
| GTCACCGGAGAACAGTATAA+TGG | - | chr3.3:76473508-76473527 | MS.gene06691:intron | 45.0% | |
| GTGTCTATTCAAGCCAGACT+TGG | - | chr3.3:76474218-76474237 | MS.gene06691:CDS | 45.0% | |
| GTTCCATCACCCTCTTTCAT+TGG | - | chr3.3:76471213-76471232 | MS.gene06691:CDS | 45.0% | |
| TCAAAGGGCTGTCTACATTG+TGG | - | chr3.3:76472562-76472581 | MS.gene06691:CDS | 45.0% | |
| TCTCAAAGTTGCTGCATCAG+TGG | + | chr3.3:76471693-76471712 | None:intergenic | 45.0% | |
| TGTTACGCCTCATTTGGGTA+TGG | - | chr3.3:76472884-76472903 | MS.gene06691:intron | 45.0% | |
| TTCAAATGGGGTCCAAGTAC+AGG | - | chr3.3:76473313-76473332 | MS.gene06691:intron | 45.0% | |
| TTCGCGAAGTCATTGGAACT+TGG | - | chr3.3:76471522-76471541 | MS.gene06691:intron | 45.0% | |
| TTGCAACATAGGGAAGCTGA+TGG | + | chr3.3:76473914-76473933 | None:intergenic | 45.0% | |
| TTGGGTATGGCAAAAGCTCT+TGG | - | chr3.3:76472897-76472916 | MS.gene06691:intron | 45.0% | |
| ! | CATGTTTTCACGGAGGAGAA+GGG | + | chr3.3:76474054-76474073 | None:intergenic | 45.0% |
| ! | GATTTCTTGTTGTGTCCGCA+TGG | - | chr3.3:76471985-76472004 | MS.gene06691:intron | 45.0% |
| ! | GCTTTTGCCATACCCAAATG+AGG | + | chr3.3:76472894-76472913 | None:intergenic | 45.0% |
| ! | GGTTTTACGCATCCGTGAAA+AGG | - | chr3.3:76473993-76474012 | MS.gene06691:intron | 45.0% |
| ! | TCAGGGTGACCATGTTTTCA+CGG | + | chr3.3:76474064-76474083 | None:intergenic | 45.0% |
| ! | TCTTGCAATGAGAGAGCATG+TGG | + | chr3.3:76471393-76471412 | None:intergenic | 45.0% |
| !! | AGAGGGTGATGGAACAAAAC+AGG | + | chr3.3:76471208-76471227 | None:intergenic | 45.0% |
| AAAAACCCAGGGCCTGTACT+TGG | + | chr3.3:76473328-76473347 | None:intergenic | 50.0% | |
| AAAAGCTTCCCCTGCAGAGA+AGG | - | chr3.3:76474381-76474400 | MS.gene06691:intron | 50.0% | |
| ACGGATAACCTTCTCTGCAG+GGG | + | chr3.3:76474392-76474411 | None:intergenic | 50.0% | |
| ACGGATGCGTAAAACCTCCA+GGG | + | chr3.3:76473989-76474008 | None:intergenic | 50.0% | |
| ATCTCGCAGCTTCGTACACA+CGG | - | chr3.3:76473806-76473825 | MS.gene06691:CDS | 50.0% | |
| ATTCGGACATGAGAGTGAGC+AGG | - | chr3.3:76474301-76474320 | MS.gene06691:intron | 50.0% | |
| CACGGATAACCTTCTCTGCA+GGG | + | chr3.3:76474393-76474412 | None:intergenic | 50.0% | |
| CCTTCTCCTCCGTGAAAACA+TGG | - | chr3.3:76474052-76474071 | MS.gene06691:CDS | 50.0% | |
| CGGCTTAATGCTGGCACTAA+AGG | - | chr3.3:76471817-76471836 | MS.gene06691:CDS | 50.0% | |
| CTCCCGACGAAGATAATCAG+AGG | - | chr3.3:76471586-76471605 | MS.gene06691:intron | 50.0% | |
| GCACTTGGTTACATGGCTGT+TGG | - | chr3.3:76471871-76471890 | MS.gene06691:CDS | 50.0% | |
| GCCTCACTCCACTTTCTCTA+TGG | - | chr3.3:76472392-76472411 | MS.gene06691:CDS | 50.0% | |
| GCGAAGTCATTGGAACTTGG+AGG | - | chr3.3:76471525-76471544 | MS.gene06691:intron | 50.0% | |
| GCTCAAGTGAAGTGTGCTCT+AGG | - | chr3.3:76473252-76473271 | MS.gene06691:intron | 50.0% | |
| GTGAAAGAGCGGCTTAATGC+TGG | - | chr3.3:76471808-76471827 | MS.gene06691:CDS | 50.0% | |
| TCATTGGAACTTGGAGGGAC+AGG | - | chr3.3:76471531-76471550 | MS.gene06691:intron | 50.0% | |
| ! | ACATAGGGAAGCTGATGGAC+TGG | + | chr3.3:76473909-76473928 | None:intergenic | 50.0% |
| ! | CCATGTTTTCACGGAGGAGA+AGG | + | chr3.3:76474055-76474074 | None:intergenic | 50.0% |
| ! | TGCTGGCACTAAAGGCATAG+AGG | - | chr3.3:76471825-76471844 | MS.gene06691:CDS | 50.0% |
| ! | TGGCACTAAAGGCATAGAGG+AGG | - | chr3.3:76471828-76471847 | MS.gene06691:CDS | 50.0% |
| !! | CGCATCCGTGAAAAGGCATT+TGG | - | chr3.3:76474000-76474019 | MS.gene06691:intron | 50.0% |
| AGAAGCAGAGAAACTCGCCC+TGG | - | chr3.3:76473969-76473988 | MS.gene06691:intron | 55.0% | |
| ATGCATGTCAGGGGAGGCTT+TGG | - | chr3.3:76474187-76474206 | MS.gene06691:CDS | 55.0% | |
| CACGGATGCGTAAAACCTCC+AGG | + | chr3.3:76473990-76474009 | None:intergenic | 55.0% | |
| GCACGGATAACCTTCTCTGC+AGG | + | chr3.3:76474394-76474413 | None:intergenic | 55.0% | |
| GGGCTGTCTACATTGTGGAG+AGG | - | chr3.3:76472567-76472586 | MS.gene06691:CDS | 55.0% | |
| ! | GGGTGACCATGTTTTCACGG+AGG | + | chr3.3:76474061-76474080 | None:intergenic | 55.0% |
| AGCAGAGAAACTCGCCCTGG+AGG | - | chr3.3:76473972-76473991 | MS.gene06691:intron | 60.0% | |
| GGGGTCCAAGTACAGGCCCT+GGG | - | chr3.3:76473320-76473339 | MS.gene06691:intron | 65.0% | |
| TGGGGTCCAAGTACAGGCCC+TGG | - | chr3.3:76473319-76473338 | MS.gene06691:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76471192 | 76474448 | 76471192 | ID=MS.gene06691 |
| chr3.3 | mRNA | 76471192 | 76474448 | 76471192 | ID=MS.gene06691.t1;Parent=MS.gene06691 |
| chr3.3 | exon | 76474399 | 76474448 | 76474399 | ID=MS.gene06691.t1.exon1;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76474399 | 76474448 | 76474399 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76474033 | 76474266 | 76474033 | ID=MS.gene06691.t1.exon2;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76474033 | 76474266 | 76474033 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76473713 | 76473938 | 76473713 | ID=MS.gene06691.t1.exon3;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76473713 | 76473938 | 76473713 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76473044 | 76473194 | 76473044 | ID=MS.gene06691.t1.exon4;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76473044 | 76473194 | 76473044 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76472553 | 76472775 | 76472553 | ID=MS.gene06691.t1.exon5;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76472553 | 76472775 | 76472553 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76472367 | 76472458 | 76472367 | ID=MS.gene06691.t1.exon6;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76472367 | 76472458 | 76472367 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76472064 | 76472199 | 76472064 | ID=MS.gene06691.t1.exon7;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76472064 | 76472199 | 76472064 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76471598 | 76471929 | 76471598 | ID=MS.gene06691.t1.exon8;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76471598 | 76471929 | 76471598 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| chr3.3 | exon | 76471192 | 76471442 | 76471192 | ID=MS.gene06691.t1.exon9;Parent=MS.gene06691.t1 |
| chr3.3 | CDS | 76471192 | 76471442 | 76471192 | ID=cds.MS.gene06691.t1;Parent=MS.gene06691.t1 |
| Gene Sequence |
| Protein sequence |
