Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36864.t1 | XP_013444907.1 | 94.5 | 667 | 30 | 1 | 1 | 667 | 1 | 660 | 0.00E+00 | 1121.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36864.t1 | Q8VZE7 | 62.0 | 571 | 216 | 1 | 81 | 650 | 97 | 667 | 1.9e-177 | 624.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36864.t1 | A0A072TNG2 | 94.5 | 667 | 30 | 1 | 1 | 667 | 1 | 660 | 0.0e+00 | 1121.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene36864 | 0.822835 | 1.91E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene36864 | 0.831651 | 1.48E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene36864 | 0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene36864 | 0.8157 | 8.08E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene36864 | 0.803507 | 3.37E-49 | -1.69E-46 |
| MS.gene049662 | MS.gene36864 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene36864 | 0.818851 | 1.58E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene36864 | 0.813873 | 2.05E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene36864 | 0.888423 | 5.98E-73 | -1.69E-46 |
| MS.gene050397 | MS.gene36864 | 0.814738 | 1.32E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene36864 | 0.809885 | 1.52E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene36864 | -0.810511 | 1.11E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene36864 | 0.830956 | 2.19E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene36864 | 0.820094 | 8.22E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene36864 | 0.843774 | 1.14E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene36864 | 0.847081 | 1.45E-59 | -1.69E-46 |
| MS.gene050783 | MS.gene36864 | 0.802975 | 4.35E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene36864 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene36864 | 0.81762 | 3.00E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene36864 | 0.85316 | 2.87E-61 | -1.69E-46 |
| MS.gene051471 | MS.gene36864 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene36864 | 0.834075 | 3.70E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene36864 | 0.875788 | 2.34E-68 | -1.69E-46 |
| MS.gene051663 | MS.gene36864 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene36864 | 0.847872 | 8.79E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene36864 | 0.827145 | 1.84E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene36864 | -0.840335 | 9.25E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene36864 | 0.824857 | 6.43E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene36864 | 0.823329 | 1.47E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene36864 | 0.865711 | 4.84E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene36864 | 0.888882 | 3.98E-73 | -1.69E-46 |
| MS.gene052310 | MS.gene36864 | 0.835818 | 1.34E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene36864 | 0.833582 | 4.91E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene36864 | 0.854809 | 9.61E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene36864 | 0.823624 | 1.25E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene36864 | 0.820229 | 7.66E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene36864 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene36864 | 0.803009 | 4.28E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene36864 | 0.808195 | 3.49E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene36864 | 0.820208 | 7.74E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene36864 | 0.878251 | 3.27E-69 | -1.69E-46 |
| MS.gene053928 | MS.gene36864 | 0.801157 | 1.03E-48 | -1.69E-46 |
| MS.gene054011 | MS.gene36864 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene36864 | 0.809426 | 1.90E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene36864 | 0.857514 | 1.55E-62 | -1.69E-46 |
| MS.gene05413 | MS.gene36864 | 0.835069 | 2.08E-56 | -1.69E-46 |
| MS.gene054183 | MS.gene36864 | 0.860844 | 1.56E-63 | -1.69E-46 |
| MS.gene054349 | MS.gene36864 | 0.817371 | 3.41E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene36864 | 0.813931 | 1.99E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene36864 | 0.805159 | 1.53E-49 | -1.69E-46 |
| MS.gene054917 | MS.gene36864 | 0.846592 | 1.97E-59 | -1.69E-46 |
| MS.gene054918 | MS.gene36864 | 0.872518 | 2.99E-67 | -1.69E-46 |
| MS.gene054920 | MS.gene36864 | 0.800284 | 1.55E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene36864 | 0.850849 | 1.30E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene36864 | 0.835628 | 1.50E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene36864 | 0.876006 | 1.97E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene36864 | 0.819131 | 1.36E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene36864 | 0.806251 | 9.01E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene36864 | 0.806766 | 7.02E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene36864 | 0.848651 | 5.35E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene36864 | 0.861576 | 9.31E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene36864 | 0.864523 | 1.14E-64 | -1.69E-46 |
| MS.gene055604 | MS.gene36864 | 0.826564 | 2.53E-54 | -1.69E-46 |
| MS.gene056337 | MS.gene36864 | 0.806182 | 9.32E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene36864 | 0.832617 | 8.54E-56 | -1.69E-46 |
| MS.gene056451 | MS.gene36864 | 0.804247 | 2.37E-49 | -1.69E-46 |
| MS.gene056497 | MS.gene36864 | 0.801804 | 7.58E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene36864 | 0.809524 | 1.81E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene36864 | 0.842432 | 2.60E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene36864 | 0.839764 | 1.30E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene36864 | 0.85917 | 4.98E-63 | -1.69E-46 |
| MS.gene056899 | MS.gene36864 | -0.813629 | 2.32E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene36864 | 0.825375 | 4.85E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene36864 | 0.871249 | 7.89E-67 | -1.69E-46 |
| MS.gene057121 | MS.gene36864 | 0.859632 | 3.62E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene36864 | 0.828637 | 8.05E-55 | -1.69E-46 |
| MS.gene057207 | MS.gene36864 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene057245 | MS.gene36864 | 0.842987 | 1.85E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene36864 | 0.821605 | 3.69E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene36864 | 0.813978 | 1.95E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene36864 | 0.811542 | 6.65E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene36864 | 0.808018 | 3.81E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene36864 | 0.808086 | 3.68E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene36864 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene36864 | 0.844814 | 5.99E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene36864 | 0.829117 | 6.16E-55 | -1.69E-46 |
| MS.gene057825 | MS.gene36864 | 0.850697 | 1.44E-60 | -1.69E-46 |
| MS.gene058002 | MS.gene36864 | 0.885717 | 6.39E-72 | -1.69E-46 |
| MS.gene058007 | MS.gene36864 | 0.825039 | 5.83E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene36864 | 0.837014 | 6.67E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene36864 | 0.889431 | 2.44E-73 | -1.69E-46 |
| MS.gene058233 | MS.gene36864 | 0.837975 | 3.79E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene36864 | 0.841117 | 5.77E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene36864 | 0.851263 | 9.95E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene36864 | 0.805745 | 1.15E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene36864 | 0.81927 | 1.27E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene36864 | 0.808715 | 2.70E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene36864 | 0.886159 | 4.36E-72 | -1.69E-46 |
| MS.gene058928 | MS.gene36864 | 0.82912 | 6.15E-55 | -1.69E-46 |
| MS.gene058949 | MS.gene36864 | 0.82372 | 1.19E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene36864 | 0.821571 | 3.76E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene36864 | 0.858238 | 9.45E-63 | -1.69E-46 |
| MS.gene059141 | MS.gene36864 | 0.846049 | 2.77E-59 | -1.69E-46 |
| MS.gene059234 | MS.gene36864 | 0.807753 | 4.33E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene36864 | 0.833804 | 4.32E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene36864 | 0.845727 | 3.39E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene36864 | 0.85694 | 2.29E-62 | -1.69E-46 |
| MS.gene059462 | MS.gene36864 | 0.830161 | 3.43E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene36864 | 0.861293 | 1.14E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene36864 | 0.808875 | 2.50E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene36864 | 0.872686 | 2.63E-67 | -1.69E-46 |
| MS.gene059692 | MS.gene36864 | 0.851862 | 6.73E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene36864 | 0.852634 | 4.06E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene36864 | 0.845581 | 3.71E-59 | -1.69E-46 |
| MS.gene059876 | MS.gene36864 | 0.813554 | 2.41E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene36864 | 0.844081 | 9.43E-59 | -1.69E-46 |
| MS.gene059899 | MS.gene36864 | 0.82888 | 7.03E-55 | -1.69E-46 |
| MS.gene060247 | MS.gene36864 | 0.808381 | 3.19E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene36864 | 0.837031 | 6.60E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene36864 | 0.828104 | 1.08E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene36864 | 0.874939 | 4.56E-68 | -1.69E-46 |
| MS.gene061114 | MS.gene36864 | -0.828817 | 7.28E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene36864 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene36864 | 0.844336 | 8.05E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36864.t1 | MTR_8g432340 | 94.603 | 667 | 29 | 1 | 1 | 667 | 1 | 660 | 0.0 | 1261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36864.t1 | AT2G31890 | 67.138 | 566 | 185 | 1 | 86 | 650 | 102 | 667 | 0.0 | 731 |
Find 145 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTTACTTACTTTAAAT+AGG | 0.178036 | 8.4:-64161826 | MS.gene36864:CDS |
| CGCCAAGTTCTCGTGGTAAC+TGG | 0.239282 | 8.4:+64163108 | None:intergenic |
| ATAGAAGATTTACTTGATTA+TGG | 0.247712 | 8.4:-64162679 | MS.gene36864:CDS |
| GGAAGGGTTATTGAATTCTT+TGG | 0.291031 | 8.4:-64163187 | MS.gene36864:CDS |
| GCTTGGTCCTATGCTGTCTT+TGG | 0.292707 | 8.4:-64161785 | MS.gene36864:CDS |
| AACTTTACTTACTTTAAATA+GGG | 0.303023 | 8.4:-64161825 | MS.gene36864:CDS |
| ACCGATTTGTTCATTATTGT+TGG | 0.305910 | 8.4:+64161877 | None:intergenic |
| AGATATCATGTTTGCTTCTC+AGG | 0.310999 | 8.4:-64161678 | MS.gene36864:CDS |
| CTTCTCAAATCACTTTCCTT+TGG | 0.312687 | 8.4:+64162628 | None:intergenic |
| GGCTTATGCGATGGAAGATT+TGG | 0.313416 | 8.4:-64162785 | MS.gene36864:CDS |
| TCATCGCATTGCTAAGAATA+TGG | 0.316718 | 8.4:-64162359 | MS.gene36864:CDS |
| AAACCCTTTGCTCCTCAAAA+TGG | 0.319665 | 8.4:+64161717 | None:intergenic |
| CAAAACATTGCTAACATTGC+AGG | 0.324391 | 8.4:-64162115 | MS.gene36864:CDS |
| ATCAGAGTTTGTCGGGGAAT+TGG | 0.338938 | 8.4:-64162941 | MS.gene36864:CDS |
| TATGGTTCAGAGGAAGAGTT+TGG | 0.340010 | 8.4:-64162661 | MS.gene36864:CDS |
| GTCAAAGAATATGTTGTAGA+TGG | 0.342480 | 8.4:-64161479 | MS.gene36864:CDS |
| AAGAAGTTCGCCTCCAACTT+TGG | 0.346703 | 8.4:+64162201 | None:intergenic |
| GAAGTTTCTTCTCTTATGTA+TGG | 0.347428 | 8.4:-64161751 | MS.gene36864:CDS |
| ATTCCTTGAGCTGAGCATTC+AGG | 0.352455 | 8.4:+64162247 | None:intergenic |
| AATAGACTGTCTCAATTCTC+TGG | 0.368929 | 8.4:-64162538 | MS.gene36864:CDS |
| TTGTATCTGTTGATCGAAAC+GGG | 0.370584 | 8.4:-64161853 | MS.gene36864:CDS |
| TTGTTAGCACTGGACTTGAA+TGG | 0.376921 | 8.4:-64161502 | MS.gene36864:CDS |
| ACACATTTCTCTAGAAATAC+TGG | 0.398436 | 8.4:-64161398 | MS.gene36864:intron |
| TAACGGAGAGGAGTCTGATA+TGG | 0.415258 | 8.4:-64162971 | MS.gene36864:CDS |
| TTGAGAGCTGACCTCTTGAT+AGG | 0.415647 | 8.4:+64160932 | None:intergenic |
| CTATGCTGTCTTTGGACAAA+TGG | 0.416506 | 8.4:-64161777 | MS.gene36864:CDS |
| ACAATTGTCGCGGTTGCAAA+AGG | 0.421350 | 8.4:-64162427 | MS.gene36864:CDS |
| CAAAGGGTTTAAAACAACTT+TGG | 0.423201 | 8.4:+64163160 | None:intergenic |
| AGGAGATAGATTGGCTGCAT+TGG | 0.425081 | 8.4:-64163004 | MS.gene36864:CDS |
| GTTACCGAGCTCCGAAGAAA+AGG | 0.425877 | 8.4:-64162909 | MS.gene36864:CDS |
| AGTCGATAAGAAGCTTGCTT+TGG | 0.428233 | 8.4:-64161435 | MS.gene36864:CDS |
| AACTTCGTCGTTTCAGAAAG+AGG | 0.432282 | 8.4:-64161537 | MS.gene36864:CDS |
| GAAATAATTCACACTTTCAA+AGG | 0.434691 | 8.4:-64162028 | MS.gene36864:CDS |
| GGTCATCTTCTTGTTAGCAC+TGG | 0.437852 | 8.4:-64161512 | MS.gene36864:CDS |
| GACAGTTCAGCGAAAAGATC+GGG | 0.438484 | 8.4:+64162064 | None:intergenic |
| CTGCAGTGGGAGGAACTTCA+AGG | 0.440694 | 8.4:-64160506 | MS.gene36864:intron |
| ATTGGGAATCAGAGTTTGTC+GGG | 0.442092 | 8.4:-64162948 | MS.gene36864:CDS |
| CGACAGTTCAGCGAAAAGAT+CGG | 0.442547 | 8.4:+64162063 | None:intergenic |
| GTCGGGGAATTGGATCCGTT+TGG | 0.444529 | 8.4:-64162931 | MS.gene36864:CDS |
| GAGAGGAGTCTGATATGGAT+TGG | 0.456624 | 8.4:-64162966 | MS.gene36864:CDS |
| AAGGAATCTCAAACATAGCT+TGG | 0.457912 | 8.4:-64162231 | MS.gene36864:CDS |
| TCAAGCACTGGTTTACAAGA+TGG | 0.458479 | 8.4:+64161654 | None:intergenic |
| AAAGAGATGTCTATGCTTGT+CGG | 0.459089 | 8.4:-64162289 | MS.gene36864:CDS |
| TCCCAGTTACCACGAGAACT+TGG | 0.459982 | 8.4:-64163110 | MS.gene36864:CDS |
| TGAAATGTTTGCAGAAAATA+CGG | 0.460460 | 8.4:-64162584 | MS.gene36864:CDS |
| TTTCGCTGAACTGTCGAAAA+GGG | 0.463715 | 8.4:-64162056 | MS.gene36864:CDS |
| GGGAAATTATAACTAACTCT+TGG | 0.464356 | 8.4:+64163129 | None:intergenic |
| TGTTAGCACTGGACTTGAAT+GGG | 0.465246 | 8.4:-64161501 | MS.gene36864:CDS |
| GGAATTCAAGTTTCAAGCAC+TGG | 0.470390 | 8.4:+64161642 | None:intergenic |
| GAGCAGTAGCAATATTCAAA+GGG | 0.471944 | 8.4:+64162383 | None:intergenic |
| AAATCACTTTCCTTTGGCTG+TGG | 0.472714 | 8.4:+64162634 | None:intergenic |
| CTGAACAGGTGGAGTACCTA+AGG | 0.484246 | 8.4:-64160478 | MS.gene36864:CDS |
| CTTTAAATAGGGATCAGCTT+GGG | 0.484370 | 8.4:-64161814 | MS.gene36864:CDS |
| CACCTACGAAACCTTTCGAT+TGG | 0.487136 | 8.4:+64161909 | None:intergenic |
| AGAGGAGTCTGATATGGATT+GGG | 0.487748 | 8.4:-64162965 | MS.gene36864:CDS |
| AAAGGGTTTCAGAGCTGTAT+CGG | 0.491181 | 8.4:-64161703 | MS.gene36864:CDS |
| TCCAACAATAATGAACAAAT+CGG | 0.492543 | 8.4:-64161878 | MS.gene36864:CDS |
| ACTTCAAGGAGGGTCTGAAC+AGG | 0.493250 | 8.4:-64160492 | MS.gene36864:CDS |
| GTCTCTATGCGGTGAGCTTG+AGG | 0.498153 | 8.4:-64161606 | MS.gene36864:CDS |
| GCTTAAACGTCGATACATTA+CGG | 0.499114 | 8.4:-64160982 | MS.gene36864:CDS |
| AAAGAAGGTTGAGGAGAAGG+TGG | 0.499984 | 8.4:-64162737 | MS.gene36864:CDS |
| AGGAATCTCAAACATAGCTT+GGG | 0.501827 | 8.4:-64162230 | MS.gene36864:CDS |
| TTGCAGAAAATACGGAGAAA+AGG | 0.502813 | 8.4:-64162576 | MS.gene36864:CDS |
| TATGATGAAAACTCGAAGAC+TGG | 0.509881 | 8.4:-64162326 | MS.gene36864:CDS |
| AAATAATTCACACTTTCAAA+GGG | 0.517159 | 8.4:-64162027 | MS.gene36864:CDS |
| AGATTGCACTGACTAAAGTC+GGG | 0.519987 | 8.4:-64162150 | MS.gene36864:CDS |
| GAGATTGCACTGACTAAAGT+CGG | 0.521548 | 8.4:-64162151 | MS.gene36864:CDS |
| GCCAAGTTCTCGTGGTAACT+GGG | 0.523815 | 8.4:+64163109 | None:intergenic |
| TTAAGCATGGTATGTCCTAA+AGG | 0.524947 | 8.4:+64160999 | None:intergenic |
| GCTTGGGCGCTGTCCAAAGT+TGG | 0.525349 | 8.4:-64162214 | MS.gene36864:CDS |
| TTGGTGTGTGAGGGCGAGAG+AGG | 0.528486 | 8.4:-64162839 | MS.gene36864:CDS |
| ATCAGCTTGGGACTATAGCT+TGG | 0.529050 | 8.4:-64161802 | MS.gene36864:CDS |
| CGTCGATACATTACGGCTGC+CGG | 0.529125 | 8.4:-64160975 | MS.gene36864:CDS |
| TTCGGAGCTCGGTAACCAAA+CGG | 0.529938 | 8.4:+64162916 | None:intergenic |
| GTTGTATCTGTTGATCGAAA+CGG | 0.531354 | 8.4:-64161854 | MS.gene36864:CDS |
| CAACGATACGAGTTTCCAAC+CGG | 0.531834 | 8.4:+64160956 | None:intergenic |
| GATAGTAAAGCCGGTGCTAG+AGG | 0.534515 | 8.4:-64163024 | MS.gene36864:CDS |
| AAGGGTTTCAGAGCTGTATC+GGG | 0.534817 | 8.4:-64161702 | MS.gene36864:CDS |
| GAGGATAAAGTTTCCAGCGC+TGG | 0.535251 | 8.4:-64161587 | MS.gene36864:CDS |
| GAATCAAATACAGTGTCAGC+AGG | 0.536610 | 8.4:+64161959 | None:intergenic |
| TGGGCGCTGTCCAAAGTTGG+AGG | 0.536614 | 8.4:-64162211 | MS.gene36864:CDS |
| ACTCTTGGAGTGAAACCAAA+GGG | 0.537314 | 8.4:+64163144 | None:intergenic |
| CGGTGCTAGAGGAGATAGAT+TGG | 0.539783 | 8.4:-64163013 | MS.gene36864:CDS |
| GTTTGGACTGCCACAGCCAA+AGG | 0.542148 | 8.4:-64162644 | MS.gene36864:CDS |
| GATTGGGAATCAGAGTTTGT+CGG | 0.543250 | 8.4:-64162949 | MS.gene36864:CDS |
| AATCGATTAAAGCGAAGGGT+AGG | 0.547508 | 8.4:-64162807 | MS.gene36864:CDS |
| ATAGACTGTCTCAATTCTCT+GGG | 0.548337 | 8.4:-64162537 | MS.gene36864:CDS |
| TCGTCGTTTCAGAAAGAGGT+TGG | 0.549276 | 8.4:-64161533 | MS.gene36864:CDS |
| TTCAAAGGGGAGAGAGGTGA+GGG | 0.552828 | 8.4:+64162397 | None:intergenic |
| TTGCCTGAATGCTCAGCTCA+AGG | 0.556576 | 8.4:-64162250 | MS.gene36864:CDS |
| CATAGAGACAACTGAAGATG+TGG | 0.559818 | 8.4:+64161620 | None:intergenic |
| CAATCTATCTCCTCTAGCAC+CGG | 0.560589 | 8.4:+64163014 | None:intergenic |
| TTACCGAGCTCCGAAGAAAA+GGG | 0.560642 | 8.4:-64162908 | MS.gene36864:CDS |
| TCAAAGAATATGTTGTAGAT+GGG | 0.560728 | 8.4:-64161478 | MS.gene36864:CDS |
| GCAATATTCAAAGGGGAGAG+AGG | 0.561399 | 8.4:+64162391 | None:intergenic |
| AGAGCAGTAGCAATATTCAA+AGG | 0.561512 | 8.4:+64162382 | None:intergenic |
| GCTTGAGGATACCGATGGAA+TGG | 0.566585 | 8.4:-64162863 | MS.gene36864:CDS |
| TTTGATAGAGATAGTAAAGC+CGG | 0.570770 | 8.4:-64163033 | MS.gene36864:CDS |
| TTGAGCTGAGCATTCAGGCA+AGG | 0.571147 | 8.4:+64162252 | None:intergenic |
| ATTTAAACGCCAAGTTCTCG+TGG | 0.571729 | 8.4:+64163101 | None:intergenic |
| GGATAATTGAAAAGTATGGA+AGG | 0.572370 | 8.4:-64163204 | None:intergenic |
| ATCGATTAAAGCGAAGGGTA+GGG | 0.575049 | 8.4:-64162806 | MS.gene36864:CDS |
| TTTACTTGATTATGGTTCAG+AGG | 0.575949 | 8.4:-64162671 | MS.gene36864:CDS |
| ACTTTAAATAGGGATCAGCT+TGG | 0.576268 | 8.4:-64161815 | MS.gene36864:CDS |
| GAAGATCATTGCCAATCGAA+AGG | 0.576493 | 8.4:-64161920 | MS.gene36864:CDS |
| GATAGATTGGCTGCATTGGA+TGG | 0.577186 | 8.4:-64163000 | MS.gene36864:CDS |
| CAAAGGAAAGTGATTTGAGA+AGG | 0.581889 | 8.4:-64162627 | MS.gene36864:CDS |
| GATACATTACGGCTGCCGGT+TGG | 0.588016 | 8.4:-64160971 | MS.gene36864:CDS |
| ATTGAAATCGATTAAAGCGA+AGG | 0.591251 | 8.4:-64162812 | MS.gene36864:CDS |
| TCAAGGAGGGTCTGAACAGG+TGG | 0.593274 | 8.4:-64160489 | MS.gene36864:CDS |
| AAGCTTGCTTTGGAGATCGA+TGG | 0.599041 | 8.4:-64161425 | MS.gene36864:CDS |
| TGTTGTAGATGGGTACACTT+TGG | 0.603253 | 8.4:-64161468 | MS.gene36864:CDS |
| CGTATCGTTGTCCTATCAAG+AGG | 0.604008 | 8.4:-64160943 | MS.gene36864:intron |
| GATAATTGAAAAGTATGGAA+GGG | 0.604646 | 8.4:-64163203 | None:intergenic |
| AGAAAATACGGAGAAAAGGA+TGG | 0.607622 | 8.4:-64162572 | MS.gene36864:CDS |
| AACTCTTGGAGTGAAACCAA+AGG | 0.610647 | 8.4:+64163143 | None:intergenic |
| GAAGGGTAGGGCTTATGCGA+TGG | 0.611487 | 8.4:-64162794 | MS.gene36864:CDS |
| ATTCAAAGGGGAGAGAGGTG+AGG | 0.612983 | 8.4:+64162396 | None:intergenic |
| GCAAAAGTCGAAGTTGCTTG+AGG | 0.618329 | 8.4:-64162878 | MS.gene36864:CDS |
| GCATTGGATGGTGATGATAA+CGG | 0.618404 | 8.4:-64162988 | MS.gene36864:CDS |
| GCAGACTGCAGATGATGTGT+TGG | 0.621746 | 8.4:-64162464 | MS.gene36864:CDS |
| AGGATACCGATGGAATGGAT+TGG | 0.626596 | 8.4:-64162858 | MS.gene36864:CDS |
| CACACACCAATCCATTCCAT+CGG | 0.628347 | 8.4:+64162852 | None:intergenic |
| TTGAAATCGATTAAAGCGAA+GGG | 0.635470 | 8.4:-64162811 | MS.gene36864:CDS |
| ATGGAATGGATTGGTGTGTG+AGG | 0.635612 | 8.4:-64162849 | MS.gene36864:CDS |
| TGGAATGGATTGGTGTGTGA+GGG | 0.643530 | 8.4:-64162848 | MS.gene36864:CDS |
| GTGTGTGAGGGCGAGAGAGG+TGG | 0.645809 | 8.4:-64162836 | MS.gene36864:CDS |
| TGAACAGGTGGAGTACCTAA+GGG | 0.653442 | 8.4:-64160477 | MS.gene36864:CDS |
| TGCCAATCGAAAGGTTTCGT+AGG | 0.653455 | 8.4:-64161911 | MS.gene36864:CDS |
| AATGTATCGACGTTTAAGCA+TGG | 0.653806 | 8.4:+64160986 | None:intergenic |
| TACATACGAAACAATTGTCG+CGG | 0.653812 | 8.4:-64162437 | MS.gene36864:CDS |
| AGTGGGAGGAACTTCAAGGA+GGG | 0.659979 | 8.4:-64160502 | MS.gene36864:CDS |
| ATAGAGACAACTGAAGATGT+GGG | 0.662526 | 8.4:+64161621 | None:intergenic |
| GTATTTCTAGAGAAATGTGT+AGG | 0.665375 | 8.4:+64161401 | None:intergenic |
| AGCAGTAGCAATATTCAAAG+GGG | 0.675316 | 8.4:+64162384 | None:intergenic |
| AAGTTGCTTGAGGATACCGA+TGG | 0.678693 | 8.4:-64162868 | MS.gene36864:CDS |
| TTGGGAATCAGAGTTTGTCG+GGG | 0.682626 | 8.4:-64162947 | MS.gene36864:CDS |
| GATTGCACTGACTAAAGTCG+GGG | 0.684216 | 8.4:-64162149 | MS.gene36864:CDS |
| AAGGCAAGTGAGTTTGATTG+CGG | 0.684765 | 8.4:-64162608 | MS.gene36864:CDS |
| CATCTTCAGTTGTCTCTATG+CGG | 0.688711 | 8.4:-64161617 | MS.gene36864:CDS |
| CAGTGGGAGGAACTTCAAGG+AGG | 0.704463 | 8.4:-64160503 | MS.gene36864:CDS |
| CATTTGTCCAAAGACAGCAT+AGG | 0.705791 | 8.4:+64161778 | None:intergenic |
| GGATGGTGATGATAACGGAG+AGG | 0.710792 | 8.4:-64162983 | MS.gene36864:CDS |
| TGATAACACTACATTGACAG+AGG | 0.716733 | 8.4:-64160423 | MS.gene36864:CDS |
| TGTATCTGTTGATCGAAACG+GGG | 0.729772 | 8.4:-64161852 | MS.gene36864:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTACTTACTTTAAATA+GGG | - | chr8.4:64161779-64161798 | MS.gene36864:CDS | 15.0% |
| !! | ACAAAAATATGAATAATAAC+AGG | + | chr8.4:64162906-64162925 | None:intergenic | 15.0% |
| !!! | ATTTTAATGAAAAAAATGAC+AGG | + | chr8.4:64162738-64162757 | None:intergenic | 15.0% |
| !!! | TTTTAATGAAAAAAATGACA+GGG | + | chr8.4:64162737-64162756 | None:intergenic | 15.0% |
| !! | AAATAATTCACACTTTCAAA+GGG | - | chr8.4:64161577-64161596 | MS.gene36864:CDS | 20.0% |
| !! | AATTGATACAAGAGAAAATA+AGG | + | chr8.4:64162520-64162539 | None:intergenic | 20.0% |
| !! | ACACATAAAATCAATATATG+TGG | + | chr8.4:64162797-64162816 | None:intergenic | 20.0% |
| !! | ATAGAAGATTTACTTGATTA+TGG | - | chr8.4:64160925-64160944 | MS.gene36864:intron | 20.0% |
| !! | CAACTTTACTTACTTTAAAT+AGG | - | chr8.4:64161778-64161797 | MS.gene36864:CDS | 20.0% |
| !!! | AACTATTTCTAGTACTTTAT+AGG | - | chr8.4:64163022-64163041 | MS.gene36864:CDS | 20.0% |
| !!! | ATAAAGTACTAGAAATAGTT+TGG | + | chr8.4:64163022-64163041 | None:intergenic | 20.0% |
| !!! | ATAAAGTCATTGTTTTCATA+TGG | + | chr8.4:64162423-64162442 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAA+AGG | - | chr8.4:64162484-64162503 | MS.gene36864:CDS | 20.0% |
| !!! | TAAAGTCATTGTTTTCATAT+GGG | + | chr8.4:64162422-64162441 | None:intergenic | 20.0% |
| !!! | TATTGATTTTATGTGTGTTT+TGG | - | chr8.4:64162801-64162820 | MS.gene36864:CDS | 20.0% |
| !!! | TTAAGTTGTTTATCCAAAAA+GGG | - | chr8.4:64162485-64162504 | MS.gene36864:CDS | 20.0% |
| ! | GAAATAATTCACACTTTCAA+AGG | - | chr8.4:64161576-64161595 | MS.gene36864:CDS | 25.0% |
| ! | GAAGAAGAAAAAGAAAAAGA+AGG | - | chr8.4:64160852-64160871 | MS.gene36864:intron | 25.0% |
| ! | GTAATATAAGATCAACTTCA+TGG | + | chr8.4:64162769-64162788 | None:intergenic | 25.0% |
| ! | TCAAAGAATATGTTGTAGAT+GGG | - | chr8.4:64162126-64162145 | MS.gene36864:CDS | 25.0% |
| ! | TCCAACAATAATGAACAAAT+CGG | - | chr8.4:64161726-64161745 | MS.gene36864:CDS | 25.0% |
| ! | TGAAATGTTTGCAGAAAATA+CGG | - | chr8.4:64161020-64161039 | MS.gene36864:intron | 25.0% |
| ! | TTAACTAAGTAAAATCACTC+AGG | - | chr8.4:64162546-64162565 | MS.gene36864:CDS | 25.0% |
| !! | ATTGTCTTTTCCTTTTATAC+AGG | - | chr8.4:64162578-64162597 | MS.gene36864:CDS | 25.0% |
| !!! | AACATTCACAATTTTTTCTG+TGG | + | chr8.4:64163061-64163080 | None:intergenic | 25.0% |
| !!! | ACTTCTTTACTTTTCAGAAA+TGG | - | chr8.4:64161419-64161438 | MS.gene36864:CDS | 25.0% |
| !!! | TCAAGTTGATTTCTTTTCTA+TGG | + | chr8.4:64161101-64161120 | None:intergenic | 25.0% |
| !!! | TTTTAAAGCAGTGGATAAAA+GGG | - | chr8.4:64162979-64162998 | MS.gene36864:CDS | 25.0% |
| !!! | TTTTTAAAGCAGTGGATAAA+AGG | - | chr8.4:64162978-64162997 | MS.gene36864:CDS | 25.0% |
| AAAATCAATATATGTGGCAG+TGG | + | chr8.4:64162791-64162810 | None:intergenic | 30.0% | |
| AAATAAGCAGCATGCATAAA+CGG | + | chr8.4:64162961-64162980 | None:intergenic | 30.0% | |
| ATTGAAATCGATTAAAGCGA+AGG | - | chr8.4:64160792-64160811 | MS.gene36864:intron | 30.0% | |
| CTCAAAAATTCAATCCAAAC+AGG | + | chr8.4:64162267-64162286 | None:intergenic | 30.0% | |
| GAAAAAGAAAAAGAAGGTTG+AGG | - | chr8.4:64160858-64160877 | MS.gene36864:intron | 30.0% | |
| GAAGTTTCTTCTCTTATGTA+TGG | - | chr8.4:64161853-64161872 | MS.gene36864:CDS | 30.0% | |
| GGGAAATTATAACTAACTCT+TGG | + | chr8.4:64160478-64160497 | None:intergenic | 30.0% | |
| GTCAAAGAATATGTTGTAGA+TGG | - | chr8.4:64162125-64162144 | MS.gene36864:CDS | 30.0% | |
| TAATAACAGGTGAAAAATCG+AGG | + | chr8.4:64162893-64162912 | None:intergenic | 30.0% | |
| TTGAAATCGATTAAAGCGAA+GGG | - | chr8.4:64160793-64160812 | MS.gene36864:intron | 30.0% | |
| TTTACTTGATTATGGTTCAG+AGG | - | chr8.4:64160933-64160952 | MS.gene36864:intron | 30.0% | |
| TTTGATAGAGATAGTAAAGC+CGG | - | chr8.4:64160571-64160590 | MS.gene36864:intron | 30.0% | |
| ! | ACACATTTCTCTAGAAATAC+TGG | - | chr8.4:64162206-64162225 | MS.gene36864:CDS | 30.0% |
| ! | CAAAGGGTTTAAAACAACTT+TGG | + | chr8.4:64160447-64160466 | None:intergenic | 30.0% |
| ! | TACTATTTGAGACAACTCAT+CGG | - | chr8.4:64162314-64162333 | MS.gene36864:CDS | 30.0% |
| ! | TATTGAATTTAGAGCCTGTT+TGG | - | chr8.4:64162250-64162269 | MS.gene36864:CDS | 30.0% |
| !! | ACCGATTTGTTCATTATTGT+TGG | + | chr8.4:64161730-64161749 | None:intergenic | 30.0% |
| !! | GTATTTCTAGAGAAATGTGT+AGG | + | chr8.4:64162206-64162225 | None:intergenic | 30.0% |
| !!! | CAAAGTTGTTTTAAACCCTT+TGG | - | chr8.4:64160445-64160464 | MS.gene36864:CDS | 30.0% |
| !!! | CTTATTTTTATGAGCTCTTC+AGG | - | chr8.4:64162372-64162391 | MS.gene36864:CDS | 30.0% |
| AAAGAGATGTCTATGCTTGT+CGG | - | chr8.4:64161315-64161334 | MS.gene36864:intron | 35.0% | |
| AAGGAATCTCAAACATAGCT+TGG | - | chr8.4:64161373-64161392 | MS.gene36864:intron | 35.0% | |
| AATAGACTGTCTCAATTCTC+TGG | - | chr8.4:64161066-64161085 | MS.gene36864:intron | 35.0% | |
| ACTTTAAATAGGGATCAGCT+TGG | - | chr8.4:64161789-64161808 | MS.gene36864:CDS | 35.0% | |
| AGAAAATACGGAGAAAAGGA+TGG | - | chr8.4:64161032-64161051 | MS.gene36864:intron | 35.0% | |
| AGAGCAGTAGCAATATTCAA+AGG | + | chr8.4:64161225-64161244 | None:intergenic | 35.0% | |
| AGATATCATGTTTGCTTCTC+AGG | - | chr8.4:64161926-64161945 | MS.gene36864:CDS | 35.0% | |
| AGCAGTAGCAATATTCAAAG+GGG | + | chr8.4:64161223-64161242 | None:intergenic | 35.0% | |
| AGGAATCTCAAACATAGCTT+GGG | - | chr8.4:64161374-64161393 | MS.gene36864:intron | 35.0% | |
| ATAGACTGTCTCAATTCTCT+GGG | - | chr8.4:64161067-64161086 | MS.gene36864:intron | 35.0% | |
| ATAGAGACAACTGAAGATGT+GGG | + | chr8.4:64161986-64162005 | None:intergenic | 35.0% | |
| CAAAACATTGCTAACATTGC+AGG | - | chr8.4:64161489-64161508 | MS.gene36864:CDS | 35.0% | |
| CAAAGGAAAGTGATTTGAGA+AGG | - | chr8.4:64160977-64160996 | MS.gene36864:CDS | 35.0% | |
| CTTCTCAAATCACTTTCCTT+TGG | + | chr8.4:64160979-64160998 | None:intergenic | 35.0% | |
| CTTTAAATAGGGATCAGCTT+GGG | - | chr8.4:64161790-64161809 | MS.gene36864:CDS | 35.0% | |
| GAGCAGTAGCAATATTCAAA+GGG | + | chr8.4:64161224-64161243 | None:intergenic | 35.0% | |
| GCTTAAACGTCGATACATTA+CGG | - | chr8.4:64162622-64162641 | MS.gene36864:CDS | 35.0% | |
| GGAAGGGTTATTGAATTCTT+TGG | - | chr8.4:64160417-64160436 | MS.gene36864:CDS | 35.0% | |
| GTTGTATCTGTTGATCGAAA+CGG | - | chr8.4:64161750-64161769 | MS.gene36864:CDS | 35.0% | |
| TAAAGGAACGCCTGTATAAA+AGG | + | chr8.4:64162591-64162610 | None:intergenic | 35.0% | |
| TACATACGAAACAATTGTCG+CGG | - | chr8.4:64161167-64161186 | MS.gene36864:intron | 35.0% | |
| TATGATGAAAACTCGAAGAC+TGG | - | chr8.4:64161278-64161297 | MS.gene36864:intron | 35.0% | |
| TCATCGCATTGCTAAGAATA+TGG | - | chr8.4:64161245-64161264 | MS.gene36864:intron | 35.0% | |
| TGATAACACTACATTGACAG+AGG | - | chr8.4:64163181-64163200 | MS.gene36864:CDS | 35.0% | |
| TGCATAAACGGATAAACTGA+TGG | + | chr8.4:64162949-64162968 | None:intergenic | 35.0% | |
| TGTTTCCAAAGAGTGAAACT+TGG | + | chr8.4:64162852-64162871 | None:intergenic | 35.0% | |
| TTAAGCATGGTATGTCCTAA+AGG | + | chr8.4:64162608-64162627 | None:intergenic | 35.0% | |
| TTGCAGAAAATACGGAGAAA+AGG | - | chr8.4:64161028-64161047 | MS.gene36864:intron | 35.0% | |
| TTGTATCTGTTGATCGAAAC+GGG | - | chr8.4:64161751-64161770 | MS.gene36864:CDS | 35.0% | |
| ! | AAGGATACTAAGTCCCTTTT+TGG | + | chr8.4:64162501-64162520 | None:intergenic | 35.0% |
| ! | AATGTATCGACGTTTAAGCA+TGG | + | chr8.4:64162621-64162640 | None:intergenic | 35.0% |
| ! | TGCTCTTTTTCCCTTTTCTT+CGG | + | chr8.4:64160709-64160728 | None:intergenic | 35.0% |
| ! | TTTTATACAGGCGTTCCTTT+AGG | - | chr8.4:64162590-64162609 | MS.gene36864:CDS | 35.0% |
| ! | TTTTTATGAGCTCTTCAGGA+TGG | - | chr8.4:64162376-64162395 | MS.gene36864:CDS | 35.0% |
| !!! | GATCTTTTAGAATGTCCCTT+AGG | + | chr8.4:64163145-64163164 | None:intergenic | 35.0% |
| !!! | GCTGCTTATTTTTAAAGCAG+TGG | - | chr8.4:64162970-64162989 | MS.gene36864:CDS | 35.0% |
| AAACCCTTTGCTCCTCAAAA+TGG | + | chr8.4:64161890-64161909 | None:intergenic | 40.0% | |
| AAAGGGTTTCAGAGCTGTAT+CGG | - | chr8.4:64161901-64161920 | MS.gene36864:CDS | 40.0% | |
| AAATCACTTTCCTTTGGCTG+TGG | + | chr8.4:64160973-64160992 | None:intergenic | 40.0% | |
| AACTCTTGGAGTGAAACCAA+AGG | + | chr8.4:64160464-64160483 | None:intergenic | 40.0% | |
| AACTTCGTCGTTTCAGAAAG+AGG | - | chr8.4:64162067-64162086 | MS.gene36864:CDS | 40.0% | |
| AAGGCAAGTGAGTTTGATTG+CGG | - | chr8.4:64160996-64161015 | MS.gene36864:CDS | 40.0% | |
| AATCGATTAAAGCGAAGGGT+AGG | - | chr8.4:64160797-64160816 | MS.gene36864:intron | 40.0% | |
| ACTCTTGGAGTGAAACCAAA+GGG | + | chr8.4:64160463-64160482 | None:intergenic | 40.0% | |
| AGAGGAGTCTGATATGGATT+GGG | - | chr8.4:64160639-64160658 | MS.gene36864:intron | 40.0% | |
| ATCGATTAAAGCGAAGGGTA+GGG | - | chr8.4:64160798-64160817 | MS.gene36864:intron | 40.0% | |
| ATTGGGAATCAGAGTTTGTC+GGG | - | chr8.4:64160656-64160675 | MS.gene36864:intron | 40.0% | |
| ATTTAAACGCCAAGTTCTCG+TGG | + | chr8.4:64160506-64160525 | None:intergenic | 40.0% | |
| CATAGAGACAACTGAAGATG+TGG | + | chr8.4:64161987-64162006 | None:intergenic | 40.0% | |
| CATCTTCAGTTGTCTCTATG+CGG | - | chr8.4:64161987-64162006 | MS.gene36864:CDS | 40.0% | |
| CATTTGTCCAAAGACAGCAT+AGG | + | chr8.4:64161829-64161848 | None:intergenic | 40.0% | |
| CTATGCTGTCTTTGGACAAA+TGG | - | chr8.4:64161827-64161846 | MS.gene36864:CDS | 40.0% | |
| GAAAAAGAAGGTTGAGGAGA+AGG | - | chr8.4:64160864-64160883 | MS.gene36864:intron | 40.0% | |
| GAAGATCATTGCCAATCGAA+AGG | - | chr8.4:64161684-64161703 | MS.gene36864:CDS | 40.0% | |
| GAATCAAATACAGTGTCAGC+AGG | + | chr8.4:64161648-64161667 | None:intergenic | 40.0% | |
| GATTGGGAATCAGAGTTTGT+CGG | - | chr8.4:64160655-64160674 | MS.gene36864:intron | 40.0% | |
| GTCTTCCAAGTTTCACTCTT+TGG | - | chr8.4:64162844-64162863 | MS.gene36864:CDS | 40.0% | |
| TATGGTTCAGAGGAAGAGTT+TGG | - | chr8.4:64160943-64160962 | MS.gene36864:intron | 40.0% | |
| TGTATCTGTTGATCGAAACG+GGG | - | chr8.4:64161752-64161771 | MS.gene36864:CDS | 40.0% | |
| TGTTGTAGATGGGTACACTT+TGG | - | chr8.4:64162136-64162155 | MS.gene36864:CDS | 40.0% | |
| TTTCGCTGAACTGTCGAAAA+GGG | - | chr8.4:64161548-64161567 | MS.gene36864:CDS | 40.0% | |
| ! | AAGAACTTGCACAGCTTTTG+TGG | - | chr8.4:64161601-64161620 | MS.gene36864:CDS | 40.0% |
| ! | AGAACTTGCACAGCTTTTGT+GGG | - | chr8.4:64161602-64161621 | MS.gene36864:CDS | 40.0% |
| ! | AGTCGATAAGAAGCTTGCTT+TGG | - | chr8.4:64162169-64162188 | MS.gene36864:CDS | 40.0% |
| ! | CACTTTTACTTTCCTGCAGT+GGG | - | chr8.4:64163085-64163104 | MS.gene36864:CDS | 40.0% |
| ! | GCATTGGATGGTGATGATAA+CGG | - | chr8.4:64160616-64160635 | MS.gene36864:intron | 40.0% |
| ! | GGAATTCAAGTTTCAAGCAC+TGG | + | chr8.4:64161965-64161984 | None:intergenic | 40.0% |
| ! | TGTTAGCACTGGACTTGAAT+GGG | - | chr8.4:64162103-64162122 | MS.gene36864:CDS | 40.0% |
| ! | TTGTTAGCACTGGACTTGAA+TGG | - | chr8.4:64162102-64162121 | MS.gene36864:CDS | 40.0% |
| ! | TTTTCGCTGAACTGTCGAAA+AGG | - | chr8.4:64161547-64161566 | MS.gene36864:CDS | 40.0% |
| !! | AGATTGCACTGACTAAAGTC+GGG | - | chr8.4:64161454-64161473 | MS.gene36864:CDS | 40.0% |
| !! | GAAAACTCTCAGCCATTTTG+AGG | - | chr8.4:64161875-64161894 | MS.gene36864:CDS | 40.0% |
| !! | GAGATTGCACTGACTAAAGT+CGG | - | chr8.4:64161453-64161472 | MS.gene36864:CDS | 40.0% |
| !! | TCAAGCACTGGTTTACAAGA+TGG | + | chr8.4:64161953-64161972 | None:intergenic | 40.0% |
| AAAGAAGGTTGAGGAGAAGG+TGG | - | chr8.4:64160867-64160886 | MS.gene36864:intron | 45.0% | |
| AAGAAGTTCGCCTCCAACTT+TGG | + | chr8.4:64161406-64161425 | None:intergenic | 45.0% | |
| AAGGGTTTCAGAGCTGTATC+GGG | - | chr8.4:64161902-64161921 | MS.gene36864:CDS | 45.0% | |
| AAGTTGCTTGAGGATACCGA+TGG | - | chr8.4:64160736-64160755 | MS.gene36864:intron | 45.0% | |
| ACAATTGTCGCGGTTGCAAA+AGG | - | chr8.4:64161177-64161196 | MS.gene36864:intron | 45.0% | |
| AGGATACCGATGGAATGGAT+TGG | - | chr8.4:64160746-64160765 | MS.gene36864:intron | 45.0% | |
| ATCAGAGTTTGTCGGGGAAT+TGG | - | chr8.4:64160663-64160682 | MS.gene36864:intron | 45.0% | |
| ATCAGCTTGGGACTATAGCT+TGG | - | chr8.4:64161802-64161821 | MS.gene36864:CDS | 45.0% | |
| ATTCCTTGAGCTGAGCATTC+AGG | + | chr8.4:64161360-64161379 | None:intergenic | 45.0% | |
| CAACGATACGAGTTTCCAAC+CGG | + | chr8.4:64162651-64162670 | None:intergenic | 45.0% | |
| CAATCTATCTCCTCTAGCAC+CGG | + | chr8.4:64160593-64160612 | None:intergenic | 45.0% | |
| CACACACCAATCCATTCCAT+CGG | + | chr8.4:64160755-64160774 | None:intergenic | 45.0% | |
| CACCTACGAAACCTTTCGAT+TGG | + | chr8.4:64161698-64161717 | None:intergenic | 45.0% | |
| CGACAGTTCAGCGAAAAGAT+CGG | + | chr8.4:64161544-64161563 | None:intergenic | 45.0% | |
| CGTATCGTTGTCCTATCAAG+AGG | - | chr8.4:64162661-64162680 | MS.gene36864:CDS | 45.0% | |
| GACAGTTCAGCGAAAAGATC+GGG | + | chr8.4:64161543-64161562 | None:intergenic | 45.0% | |
| GAGAGGAGTCTGATATGGAT+TGG | - | chr8.4:64160638-64160657 | MS.gene36864:intron | 45.0% | |
| GCAAAAGTCGAAGTTGCTTG+AGG | - | chr8.4:64160726-64160745 | MS.gene36864:intron | 45.0% | |
| GCAATATTCAAAGGGGAGAG+AGG | + | chr8.4:64161216-64161235 | None:intergenic | 45.0% | |
| GGCTTATGCGATGGAAGATT+TGG | - | chr8.4:64160819-64160838 | MS.gene36864:intron | 45.0% | |
| GGTCATCTTCTTGTTAGCAC+TGG | - | chr8.4:64162092-64162111 | MS.gene36864:CDS | 45.0% | |
| TAACGGAGAGGAGTCTGATA+TGG | - | chr8.4:64160633-64160652 | MS.gene36864:intron | 45.0% | |
| TCGTCGTTTCAGAAAGAGGT+TGG | - | chr8.4:64162071-64162090 | MS.gene36864:CDS | 45.0% | |
| TGCCAATCGAAAGGTTTCGT+AGG | - | chr8.4:64161693-64161712 | MS.gene36864:CDS | 45.0% | |
| TTACCGAGCTCCGAAGAAAA+GGG | - | chr8.4:64160696-64160715 | MS.gene36864:intron | 45.0% | |
| TTGAGAGCTGACCTCTTGAT+AGG | + | chr8.4:64162675-64162694 | None:intergenic | 45.0% | |
| TTGGGAATCAGAGTTTGTCG+GGG | - | chr8.4:64160657-64160676 | MS.gene36864:intron | 45.0% | |
| ! | AGGAGATAGATTGGCTGCAT+TGG | - | chr8.4:64160600-64160619 | MS.gene36864:intron | 45.0% |
| ! | GATAGATTGGCTGCATTGGA+TGG | - | chr8.4:64160604-64160623 | MS.gene36864:intron | 45.0% |
| ! | GCACTTTTACTTTCCTGCAG+TGG | - | chr8.4:64163084-64163103 | MS.gene36864:CDS | 45.0% |
| ! | TGAACAGGTGGAGTACCTAA+GGG | - | chr8.4:64163127-64163146 | MS.gene36864:CDS | 45.0% |
| ! | TTTCCCTTTTCTTCGGAGCT+CGG | + | chr8.4:64160702-64160721 | None:intergenic | 45.0% |
| ! | TTTTACTTTCCTGCAGTGGG+AGG | - | chr8.4:64163088-64163107 | MS.gene36864:CDS | 45.0% |
| !! | AAGCTTGCTTTGGAGATCGA+TGG | - | chr8.4:64162179-64162198 | MS.gene36864:CDS | 45.0% |
| !! | ATGGAATGGATTGGTGTGTG+AGG | - | chr8.4:64160755-64160774 | MS.gene36864:intron | 45.0% |
| !! | CAGCCATTTTGAGGAGCAAA+GGG | - | chr8.4:64161884-64161903 | MS.gene36864:CDS | 45.0% |
| !! | GATTGCACTGACTAAAGTCG+GGG | - | chr8.4:64161455-64161474 | MS.gene36864:CDS | 45.0% |
| !! | TCAGCCATTTTGAGGAGCAA+AGG | - | chr8.4:64161883-64161902 | MS.gene36864:CDS | 45.0% |
| !! | TGGAATGGATTGGTGTGTGA+GGG | - | chr8.4:64160756-64160775 | MS.gene36864:intron | 45.0% |
| ACTTCAAGGAGGGTCTGAAC+AGG | - | chr8.4:64163112-64163131 | MS.gene36864:CDS | 50.0% | |
| AGTGGGAGGAACTTCAAGGA+GGG | - | chr8.4:64163102-64163121 | MS.gene36864:CDS | 50.0% | |
| ATTCAAAGGGGAGAGAGGTG+AGG | + | chr8.4:64161211-64161230 | None:intergenic | 50.0% | |
| GAGGATAAAGTTTCCAGCGC+TGG | - | chr8.4:64162017-64162036 | MS.gene36864:CDS | 50.0% | |
| GCAGACTGCAGATGATGTGT+TGG | - | chr8.4:64161140-64161159 | MS.gene36864:intron | 50.0% | |
| GCCAAGTTCTCGTGGTAACT+GGG | + | chr8.4:64160498-64160517 | None:intergenic | 50.0% | |
| GCTTGAGGATACCGATGGAA+TGG | - | chr8.4:64160741-64160760 | MS.gene36864:intron | 50.0% | |
| GCTTGGTCCTATGCTGTCTT+TGG | - | chr8.4:64161819-64161838 | MS.gene36864:CDS | 50.0% | |
| GTTACCGAGCTCCGAAGAAA+AGG | - | chr8.4:64160695-64160714 | MS.gene36864:intron | 50.0% | |
| TCCCAGTTACCACGAGAACT+TGG | - | chr8.4:64160494-64160513 | MS.gene36864:CDS | 50.0% | |
| TTCAAAGGGGAGAGAGGTGA+GGG | + | chr8.4:64161210-64161229 | None:intergenic | 50.0% | |
| TTCGGAGCTCGGTAACCAAA+CGG | + | chr8.4:64160691-64160710 | None:intergenic | 50.0% | |
| TTGAGCTGAGCATTCAGGCA+AGG | + | chr8.4:64161355-64161374 | None:intergenic | 50.0% | |
| TTGCCTGAATGCTCAGCTCA+AGG | - | chr8.4:64161354-64161373 | MS.gene36864:intron | 50.0% | |
| ! | CCAGCGCTGGAAAAACGAAA+AGG | - | chr8.4:64162030-64162049 | MS.gene36864:CDS | 50.0% |
| ! | CGGTGCTAGAGGAGATAGAT+TGG | - | chr8.4:64160591-64160610 | MS.gene36864:intron | 50.0% |
| ! | CTGAACAGGTGGAGTACCTA+AGG | - | chr8.4:64163126-64163145 | MS.gene36864:CDS | 50.0% |
| ! | GATAGTAAAGCCGGTGCTAG+AGG | - | chr8.4:64160580-64160599 | MS.gene36864:intron | 50.0% |
| !! | CCTTTTCGTTTTTCCAGCGC+TGG | + | chr8.4:64162033-64162052 | None:intergenic | 50.0% |
| !! | GGATGGTGATGATAACGGAG+AGG | - | chr8.4:64160621-64160640 | MS.gene36864:intron | 50.0% |
| CAGTGGGAGGAACTTCAAGG+AGG | - | chr8.4:64163101-64163120 | MS.gene36864:CDS | 55.0% | |
| CGCCAAGTTCTCGTGGTAAC+TGG | + | chr8.4:64160499-64160518 | None:intergenic | 55.0% | |
| CGTCGATACATTACGGCTGC+CGG | - | chr8.4:64162629-64162648 | MS.gene36864:CDS | 55.0% | |
| CTGCAGTGGGAGGAACTTCA+AGG | - | chr8.4:64163098-64163117 | MS.gene36864:CDS | 55.0% | |
| CTTGAAGTTCCTCCCACTGC+AGG | + | chr8.4:64163100-64163119 | None:intergenic | 55.0% | |
| GAAGGGTAGGGCTTATGCGA+TGG | - | chr8.4:64160810-64160829 | MS.gene36864:intron | 55.0% | |
| GATACATTACGGCTGCCGGT+TGG | - | chr8.4:64162633-64162652 | MS.gene36864:CDS | 55.0% | |
| GTCGGGGAATTGGATCCGTT+TGG | - | chr8.4:64160673-64160692 | MS.gene36864:intron | 55.0% | |
| GTCTCTATGCGGTGAGCTTG+AGG | - | chr8.4:64161998-64162017 | MS.gene36864:CDS | 55.0% | |
| GTTTGGACTGCCACAGCCAA+AGG | - | chr8.4:64160960-64160979 | MS.gene36864:CDS | 55.0% | |
| TCAAGGAGGGTCTGAACAGG+TGG | - | chr8.4:64163115-64163134 | MS.gene36864:CDS | 55.0% | |
| TTGGTGTGTGAGGGCGAGAG+AGG | - | chr8.4:64160765-64160784 | MS.gene36864:intron | 60.0% | |
| ! | GCTTGGGCGCTGTCCAAAGT+TGG | - | chr8.4:64161390-64161409 | MS.gene36864:intron | 60.0% |
| ! | TGGGCGCTGTCCAAAGTTGG+AGG | - | chr8.4:64161393-64161412 | MS.gene36864:intron | 60.0% |
| GTGTGTGAGGGCGAGAGAGG+TGG | - | chr8.4:64160768-64160787 | MS.gene36864:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 64160415 | 64163211 | 64160415 | ID=MS.gene36864 |
| chr8.4 | mRNA | 64160415 | 64163211 | 64160415 | ID=MS.gene36864.t1;Parent=MS.gene36864 |
| chr8.4 | exon | 64161399 | 64163211 | 64161399 | ID=MS.gene36864.t1.exon1;Parent=MS.gene36864.t1 |
| chr8.4 | CDS | 64161399 | 64163211 | 64161399 | ID=cds.MS.gene36864.t1;Parent=MS.gene36864.t1 |
| chr8.4 | exon | 64160944 | 64161026 | 64160944 | ID=MS.gene36864.t1.exon2;Parent=MS.gene36864.t1 |
| chr8.4 | CDS | 64160944 | 64161026 | 64160944 | ID=cds.MS.gene36864.t1;Parent=MS.gene36864.t1 |
| chr8.4 | exon | 64160415 | 64160522 | 64160415 | ID=MS.gene36864.t1.exon3;Parent=MS.gene36864.t1 |
| chr8.4 | CDS | 64160415 | 64160522 | 64160415 | ID=cds.MS.gene36864.t1;Parent=MS.gene36864.t1 |
| Gene Sequence |
| Protein sequence |
