Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26649.t1 | RHN47677.1 | 93.3 | 526 | 35 | 0 | 1 | 526 | 1 | 526 | 2.20E-281 | 977.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26649.t1 | Q9FJL3 | 53.2 | 517 | 235 | 4 | 16 | 525 | 42 | 558 | 5.8e-153 | 542.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26649.t1 | A0A396H9R0 | 93.3 | 526 | 35 | 0 | 1 | 526 | 1 | 526 | 1.6e-281 | 977.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene26649 | 0.825977 | 3.49E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene26649 | 0.837598 | 4.73E-57 | -1.69E-46 |
| MS.gene049170 | MS.gene26649 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene26649 | 0.858673 | 7.01E-63 | -1.69E-46 |
| MS.gene049378 | MS.gene26649 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene26649 | 0.826695 | 2.36E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene26649 | 0.807067 | 6.06E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene26649 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene26649 | 0.851089 | 1.11E-60 | -1.69E-46 |
| MS.gene049910 | MS.gene26649 | 0.887769 | 1.07E-72 | -1.69E-46 |
| MS.gene049915 | MS.gene26649 | 0.81909 | 1.39E-52 | -1.69E-46 |
| MS.gene049993 | MS.gene26649 | 0.821252 | 4.46E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene26649 | 0.815623 | 8.41E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene26649 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene26649 | 0.810948 | 8.94E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene26649 | 0.873214 | 1.75E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene26649 | 0.834538 | 2.83E-56 | -1.69E-46 |
| MS.gene050398 | MS.gene26649 | 0.805935 | 1.05E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene26649 | 0.83292 | 7.18E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene26649 | -0.815857 | 7.46E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene26649 | 0.855705 | 5.27E-62 | -1.69E-46 |
| MS.gene050529 | MS.gene26649 | 0.839888 | 1.21E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene26649 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene26649 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene26649 | 0.869835 | 2.30E-66 | -1.69E-46 |
| MS.gene050820 | MS.gene26649 | 0.827553 | 1.47E-54 | -1.69E-46 |
| MS.gene050971 | MS.gene26649 | 0.816932 | 4.28E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene26649 | 0.806337 | 8.64E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene26649 | 0.838596 | 2.62E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene26649 | 0.84994 | 2.34E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene26649 | 0.859228 | 4.78E-63 | -1.69E-46 |
| MS.gene051605 | MS.gene26649 | 0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene26649 | 0.86283 | 3.84E-64 | -1.69E-46 |
| MS.gene051983 | MS.gene26649 | 0.834873 | 2.33E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene26649 | -0.854017 | 1.63E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene26649 | 0.886675 | 2.78E-72 | -1.69E-46 |
| MS.gene052078 | MS.gene26649 | 0.801707 | 7.93E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene26649 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene26649 | 0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene26649 | 0.870234 | 1.70E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene26649 | 0.895081 | 1.34E-75 | -1.69E-46 |
| MS.gene052255 | MS.gene26649 | 0.832482 | 9.22E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene26649 | 0.862949 | 3.53E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene26649 | 0.806684 | 7.30E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene26649 | 0.884691 | 1.54E-71 | -1.69E-46 |
| MS.gene052421 | MS.gene26649 | 0.815702 | 8.07E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene26649 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene26649 | 0.847022 | 1.50E-59 | -1.69E-46 |
| MS.gene053073 | MS.gene26649 | 0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene26649 | 0.815885 | 7.35E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene26649 | 0.827841 | 1.25E-54 | -1.69E-46 |
| MS.gene053494 | MS.gene26649 | 0.829488 | 5.01E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene26649 | 0.83784 | 4.10E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene26649 | 0.885126 | 1.06E-71 | -1.69E-46 |
| MS.gene053928 | MS.gene26649 | 0.821887 | 3.18E-53 | -1.69E-46 |
| MS.gene054010 | MS.gene26649 | 0.814179 | 1.76E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene26649 | 0.825011 | 5.92E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene26649 | 0.818259 | 2.15E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene26649 | 0.811067 | 8.43E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene26649 | 0.819931 | 8.96E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene26649 | 0.86026 | 2.34E-63 | -1.69E-46 |
| MS.gene054349 | MS.gene26649 | 0.856344 | 3.43E-62 | -1.69E-46 |
| MS.gene054473 | MS.gene26649 | 0.823536 | 1.31E-53 | -1.69E-46 |
| MS.gene054542 | MS.gene26649 | 0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene26649 | 0.8213 | 4.34E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene26649 | 0.823272 | 1.51E-53 | -1.69E-46 |
| MS.gene054918 | MS.gene26649 | 0.847072 | 1.46E-59 | -1.69E-46 |
| MS.gene054930 | MS.gene26649 | 0.855741 | 5.15E-62 | -1.69E-46 |
| MS.gene054983 | MS.gene26649 | 0.843773 | 1.14E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene26649 | 0.891355 | 4.29E-74 | -1.69E-46 |
| MS.gene055277 | MS.gene26649 | 0.829316 | 5.51E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene26649 | 0.815249 | 1.02E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene26649 | 0.844441 | 7.54E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene26649 | 0.829734 | 4.36E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene26649 | 0.864106 | 1.54E-64 | -1.69E-46 |
| MS.gene055604 | MS.gene26649 | 0.828299 | 9.71E-55 | -1.69E-46 |
| MS.gene055666 | MS.gene26649 | 0.805736 | 1.16E-49 | -1.69E-46 |
| MS.gene055859 | MS.gene26649 | 0.804886 | 1.74E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene26649 | 0.83701 | 6.69E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene26649 | 0.851686 | 7.55E-61 | -1.69E-46 |
| MS.gene056511 | MS.gene26649 | 0.81905 | 1.42E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene26649 | 0.82899 | 6.61E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene26649 | 0.846131 | 2.63E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene26649 | 0.850583 | 1.55E-60 | -1.69E-46 |
| MS.gene056899 | MS.gene26649 | -0.82607 | 3.32E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene26649 | 0.83149 | 1.62E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene26649 | 0.879662 | 1.04E-69 | -1.69E-46 |
| MS.gene057121 | MS.gene26649 | 0.819568 | 1.08E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene26649 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene26649 | 0.807053 | 6.10E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene26649 | 0.843775 | 1.14E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene26649 | 0.827089 | 1.90E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene26649 | 0.812917 | 3.33E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene26649 | 0.825216 | 5.29E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene26649 | 0.81995 | 8.87E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene26649 | 0.82478 | 6.71E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene26649 | 0.852824 | 3.58E-61 | -1.69E-46 |
| MS.gene057750 | MS.gene26649 | 0.812937 | 3.30E-51 | -1.69E-46 |
| MS.gene057779 | MS.gene26649 | 0.818692 | 1.72E-52 | -1.69E-46 |
| MS.gene057782 | MS.gene26649 | 0.804993 | 1.65E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene26649 | 0.847951 | 8.35E-60 | -1.69E-46 |
| MS.gene057825 | MS.gene26649 | 0.820361 | 7.15E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene26649 | 0.868394 | 6.75E-66 | -1.69E-46 |
| MS.gene058007 | MS.gene26649 | 0.821369 | 4.19E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene26649 | 0.847212 | 1.33E-59 | -1.69E-46 |
| MS.gene058139 | MS.gene26649 | 0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene058142 | MS.gene26649 | 0.852216 | 5.34E-61 | -1.69E-46 |
| MS.gene058233 | MS.gene26649 | 0.823797 | 1.14E-53 | -1.69E-46 |
| MS.gene058276 | MS.gene26649 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene26649 | 0.806148 | 9.47E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene26649 | 0.831799 | 1.36E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene26649 | 0.823094 | 1.67E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene26649 | 0.836959 | 6.89E-57 | -1.69E-46 |
| MS.gene058749 | MS.gene26649 | 0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene26649 | 0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene26649 | 0.843824 | 1.10E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene26649 | 0.846372 | 2.26E-59 | -1.69E-46 |
| MS.gene058949 | MS.gene26649 | 0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene058995 | MS.gene26649 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene26649 | 0.831646 | 1.48E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene26649 | 0.875832 | 2.26E-68 | -1.69E-46 |
| MS.gene059082 | MS.gene26649 | 0.824253 | 8.92E-54 | -1.69E-46 |
| MS.gene059124 | MS.gene26649 | 0.802413 | 5.68E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene26649 | 0.8482 | 7.13E-60 | -1.69E-46 |
| MS.gene059247 | MS.gene26649 | 0.80364 | 3.17E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene26649 | 0.863684 | 2.09E-64 | -1.69E-46 |
| MS.gene059294 | MS.gene26649 | 0.817397 | 3.37E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene26649 | 0.812218 | 4.73E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene26649 | 0.874371 | 7.12E-68 | -1.69E-46 |
| MS.gene059462 | MS.gene26649 | 0.820891 | 5.40E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene26649 | 0.812508 | 4.09E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene26649 | 0.856135 | 3.95E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene26649 | 0.819139 | 1.36E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene26649 | 0.878472 | 2.73E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene26649 | 0.875143 | 3.89E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene26649 | 0.878953 | 1.85E-69 | -1.69E-46 |
| MS.gene059807 | MS.gene26649 | 0.828381 | 9.28E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene26649 | 0.882097 | 1.39E-70 | -1.69E-46 |
| MS.gene059876 | MS.gene26649 | 0.823158 | 1.61E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene26649 | 0.844602 | 6.83E-59 | -1.69E-46 |
| MS.gene060247 | MS.gene26649 | 0.824848 | 6.46E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene26649 | 0.814014 | 1.91E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene26649 | 0.840045 | 1.10E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene26649 | 0.815326 | 9.79E-52 | -1.69E-46 |
| MS.gene060495 | MS.gene26649 | 0.813705 | 2.24E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene26649 | 0.839523 | 1.51E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene26649 | 0.896823 | 2.55E-76 | -1.69E-46 |
| MS.gene061051 | MS.gene26649 | -0.801199 | 1.01E-48 | -1.69E-46 |
| MS.gene061114 | MS.gene26649 | -0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene061154 | MS.gene26649 | 0.833468 | 5.24E-56 | -1.69E-46 |
| MS.gene061159 | MS.gene26649 | 0.868432 | 6.56E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26649.t1 | MTR_8g080980 | 52.975 | 521 | 231 | 4 | 15 | 526 | 32 | 547 | 0.0 | 547 |
| MS.gene26649.t1 | MTR_7g053470 | 52.642 | 511 | 238 | 2 | 15 | 521 | 28 | 538 | 0.0 | 530 |
| MS.gene26649.t1 | MTR_8g012340 | 53.000 | 500 | 229 | 2 | 33 | 526 | 52 | 551 | 0.0 | 521 |
| MS.gene26649.t1 | MTR_1g017870 | 40.820 | 512 | 290 | 6 | 19 | 523 | 37 | 542 | 4.19e-127 | 382 |
| MS.gene26649.t1 | MTR_1g017870 | 30.417 | 240 | 144 | 5 | 130 | 359 | 32 | 258 | 8.52e-22 | 99.4 |
| MS.gene26649.t1 | MTR_1g017870 | 40.820 | 512 | 290 | 6 | 19 | 523 | 37 | 542 | 1.49e-126 | 382 |
| MS.gene26649.t1 | MTR_1g017870 | 30.000 | 240 | 145 | 5 | 130 | 359 | 32 | 258 | 1.28e-21 | 99.0 |
| MS.gene26649.t1 | MTR_1g017870 | 40.899 | 445 | 250 | 6 | 86 | 523 | 80 | 518 | 4.83e-106 | 328 |
| MS.gene26649.t1 | MTR_1g017870 | 30.102 | 196 | 125 | 3 | 22 | 207 | 127 | 320 | 7.97e-18 | 87.0 |
| MS.gene26649.t1 | MTR_1g017870 | 33.621 | 116 | 73 | 2 | 13 | 124 | 237 | 352 | 2.91e-11 | 66.2 |
| MS.gene26649.t1 | MTR_8g038785 | 47.605 | 334 | 164 | 5 | 36 | 361 | 185 | 515 | 1.02e-88 | 284 |
| MS.gene26649.t1 | MTR_8g038785 | 31.250 | 240 | 151 | 6 | 21 | 252 | 291 | 524 | 3.01e-24 | 107 |
| MS.gene26649.t1 | MTR_1g017870 | 40.701 | 371 | 212 | 4 | 160 | 523 | 47 | 416 | 4.58e-88 | 277 |
| MS.gene26649.t1 | MTR_1g017870 | 27.551 | 196 | 130 | 3 | 22 | 207 | 25 | 218 | 6.98e-16 | 80.1 |
| MS.gene26649.t1 | MTR_1g017870 | 33.621 | 116 | 73 | 2 | 13 | 124 | 135 | 250 | 1.78e-11 | 66.6 |
| MS.gene26649.t1 | MTR_1g017870 | 40.701 | 371 | 212 | 4 | 160 | 523 | 47 | 416 | 8.71e-88 | 278 |
| MS.gene26649.t1 | MTR_1g017870 | 27.551 | 196 | 130 | 3 | 22 | 207 | 25 | 218 | 8.85e-16 | 80.1 |
| MS.gene26649.t1 | MTR_1g017870 | 33.621 | 116 | 73 | 2 | 13 | 124 | 135 | 250 | 1.84e-11 | 66.6 |
| MS.gene26649.t1 | MTR_1g017870 | 41.265 | 332 | 189 | 3 | 197 | 523 | 2 | 332 | 2.48e-79 | 252 |
| MS.gene26649.t1 | MTR_1g017870 | 34.586 | 133 | 77 | 2 | 85 | 207 | 2 | 134 | 1.78e-14 | 75.1 |
| MS.gene26649.t1 | MTR_1g017870 | 33.621 | 116 | 73 | 2 | 13 | 124 | 51 | 166 | 6.42e-12 | 67.4 |
| MS.gene26649.t1 | MTR_1g017870 | 41.265 | 332 | 189 | 3 | 197 | 523 | 2 | 332 | 5.09e-79 | 252 |
| MS.gene26649.t1 | MTR_1g017870 | 34.586 | 133 | 77 | 2 | 85 | 207 | 2 | 134 | 2.37e-14 | 75.1 |
| MS.gene26649.t1 | MTR_1g017870 | 33.621 | 116 | 73 | 2 | 13 | 124 | 51 | 166 | 7.33e-12 | 67.4 |
| MS.gene26649.t1 | MTR_8g010620 | 42.433 | 337 | 180 | 6 | 119 | 445 | 7 | 339 | 3.21e-70 | 229 |
| MS.gene26649.t1 | MTR_8g010620 | 29.008 | 262 | 162 | 8 | 21 | 265 | 25 | 279 | 1.71e-16 | 81.6 |
| MS.gene26649.t1 | MTR_8g010620 | 42.433 | 337 | 180 | 6 | 119 | 445 | 43 | 375 | 1.16e-69 | 229 |
| MS.gene26649.t1 | MTR_8g010620 | 29.008 | 262 | 162 | 8 | 21 | 265 | 61 | 315 | 2.14e-16 | 81.6 |
| MS.gene26649.t1 | MTR_8g010620 | 39.503 | 362 | 180 | 7 | 119 | 445 | 43 | 400 | 4.06e-64 | 215 |
| MS.gene26649.t1 | MTR_8g010620 | 27.018 | 285 | 163 | 8 | 21 | 265 | 61 | 340 | 7.88e-14 | 73.9 |
| MS.gene26649.t1 | MTR_8g011100 | 40.483 | 331 | 165 | 6 | 121 | 442 | 76 | 383 | 2.10e-62 | 210 |
| MS.gene26649.t1 | MTR_8g011100 | 27.586 | 261 | 147 | 8 | 21 | 265 | 92 | 326 | 2.29e-11 | 66.2 |
| MS.gene26649.t1 | MTR_4g055500 | 31.346 | 520 | 317 | 11 | 15 | 509 | 29 | 533 | 2.80e-56 | 199 |
| MS.gene26649.t1 | MTR_8g008640 | 38.305 | 295 | 124 | 5 | 73 | 361 | 69 | 311 | 6.88e-45 | 169 |
| MS.gene26649.t1 | MTR_8g008640 | 29.665 | 209 | 132 | 5 | 48 | 243 | 103 | 309 | 8.15e-17 | 84.3 |
| MS.gene26649.t1 | MTR_8g010620 | 40.613 | 261 | 144 | 4 | 192 | 445 | 16 | 272 | 2.84e-44 | 159 |
| MS.gene26649.t1 | MTR_8g010620 | 29.808 | 208 | 124 | 7 | 75 | 265 | 10 | 212 | 1.60e-12 | 68.9 |
| MS.gene26649.t1 | MTR_8g011560 | 43.931 | 173 | 87 | 3 | 282 | 445 | 33 | 204 | 3.48e-34 | 129 |
| MS.gene26649.t1 | MTR_8g011140 | 35.926 | 270 | 121 | 8 | 126 | 380 | 33 | 265 | 2.68e-33 | 127 |
| MS.gene26649.t1 | MTR_8g023740 | 43.871 | 155 | 72 | 5 | 158 | 305 | 7 | 153 | 2.67e-25 | 102 |
| MS.gene26649.t1 | MTR_8g012380 | 47.674 | 86 | 45 | 0 | 39 | 124 | 50 | 135 | 2.53e-23 | 96.7 |
| MS.gene26649.t1 | MTR_4g039430 | 30.545 | 275 | 181 | 9 | 253 | 518 | 54 | 327 | 5.48e-20 | 92.0 |
| MS.gene26649.t1 | MTR_5g080300 | 38.739 | 111 | 65 | 2 | 18 | 125 | 9 | 119 | 3.49e-19 | 85.9 |
| MS.gene26649.t1 | MTR_8g011580 | 30.769 | 221 | 99 | 6 | 248 | 445 | 74 | 263 | 3.21e-18 | 85.9 |
| MS.gene26649.t1 | MTR_8g012360 | 28.346 | 254 | 131 | 7 | 248 | 470 | 31 | 264 | 5.67e-18 | 84.3 |
| MS.gene26649.t1 | MTR_2g009390 | 44.954 | 109 | 54 | 4 | 21 | 124 | 2 | 109 | 1.30e-16 | 76.3 |
| MS.gene26649.t1 | MTR_4g094785 | 37.113 | 97 | 50 | 2 | 39 | 124 | 141 | 237 | 7.40e-16 | 77.8 |
| MS.gene26649.t1 | MTR_8g079690 | 33.987 | 153 | 97 | 3 | 374 | 523 | 209 | 360 | 2.74e-14 | 74.7 |
| MS.gene26649.t1 | MTR_4g032680 | 37.931 | 87 | 52 | 2 | 39 | 124 | 573 | 658 | 2.48e-12 | 70.1 |
| MS.gene26649.t1 | MTR_4g032680 | 37.931 | 87 | 52 | 2 | 39 | 124 | 673 | 758 | 2.54e-12 | 70.1 |
| MS.gene26649.t1 | MTR_7g059150 | 34.959 | 123 | 72 | 1 | 371 | 493 | 89 | 203 | 2.80e-12 | 67.4 |
| MS.gene26649.t1 | MTR_4g032680 | 37.931 | 87 | 52 | 2 | 39 | 124 | 782 | 867 | 2.86e-12 | 70.1 |
| MS.gene26649.t1 | MTR_4g032680 | 37.931 | 87 | 52 | 2 | 39 | 124 | 782 | 867 | 2.86e-12 | 70.1 |
| MS.gene26649.t1 | MTR_4g086760 | 27.168 | 173 | 116 | 2 | 352 | 521 | 194 | 359 | 3.71e-12 | 68.2 |
| MS.gene26649.t1 | MTR_2g090135 | 34.146 | 123 | 73 | 1 | 371 | 493 | 92 | 206 | 5.02e-12 | 67.0 |
| MS.gene26649.t1 | MTR_5g008680 | 38.636 | 88 | 49 | 2 | 39 | 124 | 413 | 497 | 3.02e-11 | 66.2 |
| MS.gene26649.t1 | MTR_4g068190 | 35.484 | 93 | 56 | 2 | 35 | 123 | 126 | 218 | 8.01e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26649.t1 | AT5G48570 | 53.191 | 517 | 235 | 4 | 16 | 525 | 42 | 558 | 0.0 | 551 |
| MS.gene26649.t1 | AT3G25230 | 50.977 | 512 | 246 | 2 | 20 | 526 | 38 | 549 | 0.0 | 527 |
| MS.gene26649.t1 | AT3G25230 | 51.076 | 511 | 245 | 2 | 20 | 525 | 38 | 548 | 0.0 | 526 |
| MS.gene26649.t1 | AT3G54010 | 29.767 | 514 | 333 | 11 | 15 | 509 | 27 | 531 | 5.08e-53 | 190 |
| MS.gene26649.t1 | AT3G54010 | 30.000 | 450 | 291 | 10 | 75 | 509 | 1 | 441 | 4.31e-47 | 172 |
| MS.gene26649.t1 | AT1G58450 | 45.513 | 156 | 84 | 1 | 368 | 523 | 1 | 155 | 5.46e-38 | 137 |
| MS.gene26649.t1 | AT5G48580 | 48.276 | 87 | 45 | 0 | 39 | 125 | 52 | 138 | 2.68e-24 | 99.8 |
| MS.gene26649.t1 | AT3G21640 | 29.749 | 279 | 180 | 8 | 252 | 518 | 48 | 322 | 5.44e-22 | 98.2 |
| MS.gene26649.t1 | AT3G25220 | 43.678 | 87 | 49 | 0 | 39 | 125 | 52 | 138 | 2.15e-21 | 91.3 |
| MS.gene26649.t1 | AT3G55520 | 39.640 | 111 | 64 | 2 | 18 | 125 | 9 | 119 | 3.34e-17 | 80.5 |
| MS.gene26649.t1 | AT3G55520 | 39.640 | 111 | 64 | 2 | 18 | 125 | 9 | 119 | 3.34e-17 | 80.5 |
| MS.gene26649.t1 | AT3G55520 | 39.640 | 111 | 64 | 2 | 18 | 125 | 9 | 119 | 3.34e-17 | 80.5 |
| MS.gene26649.t1 | AT5G45680 | 40.206 | 97 | 47 | 2 | 39 | 124 | 109 | 205 | 3.43e-17 | 80.9 |
| MS.gene26649.t1 | AT4G25340 | 45.977 | 87 | 45 | 2 | 39 | 124 | 389 | 474 | 5.81e-15 | 77.8 |
| MS.gene26649.t1 | AT5G64350 | 42.202 | 109 | 57 | 4 | 21 | 124 | 2 | 109 | 7.58e-15 | 71.2 |
| MS.gene26649.t1 | AT2G15790 | 29.268 | 164 | 103 | 3 | 356 | 506 | 181 | 344 | 4.57e-12 | 68.2 |
| MS.gene26649.t1 | AT2G43560 | 35.484 | 93 | 56 | 2 | 35 | 123 | 64 | 156 | 1.45e-11 | 63.5 |
| MS.gene26649.t1 | AT5G05420 | 39.080 | 87 | 50 | 3 | 39 | 124 | 56 | 140 | 3.53e-11 | 61.6 |
| MS.gene26649.t1 | AT2G43560 | 35.484 | 93 | 56 | 2 | 35 | 123 | 120 | 212 | 8.61e-11 | 62.4 |
Find 93 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAGAGCCTTCACATTTA+AGG | 0.117188 | 7.2:+20032807 | None:intergenic |
| TGCTGCTTGTAAACTTAAAT+TGG | 0.151479 | 7.2:-20033118 | MS.gene26649:CDS |
| GGAGGACCCTTTATCATAAT+TGG | 0.173095 | 7.2:+20035621 | None:intergenic |
| AATTGATTGTACCTGTTATT+AGG | 0.195670 | 7.2:+20032706 | None:intergenic |
| CATTGAGCTTGATGATTTAC+TGG | 0.219635 | 7.2:-20034323 | MS.gene26649:CDS |
| TCCTTAGCATATGGGGAAAA+AGG | 0.224851 | 7.2:-20035315 | MS.gene26649:CDS |
| TTTAGAGGACAAGTTGAAAA+TGG | 0.239425 | 7.2:-20035658 | MS.gene26649:CDS |
| AGCACTTCATCAAGCTCTTT+TGG | 0.244910 | 7.2:+20035156 | None:intergenic |
| TGTTTCCTTGCAAATTATTA+TGG | 0.255043 | 7.2:+20033608 | None:intergenic |
| CATTTAAGGGATCTTGTTCT+AGG | 0.256787 | 7.2:+20032821 | None:intergenic |
| TCCTCCTTTCATTTCAAATT+AGG | 0.262521 | 7.2:-20035604 | MS.gene26649:CDS |
| GTGATCAGGAGAAGCCATTT+TGG | 0.264258 | 7.2:-20033433 | MS.gene26649:intron |
| TATTCAAGGCTCAAAATTTC+AGG | 0.272029 | 7.2:-20033349 | MS.gene26649:CDS |
| CTAGAATCCAATTATGATAA+AGG | 0.277237 | 7.2:-20035628 | MS.gene26649:CDS |
| AGCAGCATTGTTCAAATTAC+AGG | 0.279640 | 7.2:+20033134 | None:intergenic |
| TATGAAGCAAGGCTTGAAAA+TGG | 0.287212 | 7.2:-20034968 | MS.gene26649:CDS |
| CTAATTCAACTTCATAATAA+AGG | 0.298118 | 7.2:+20033569 | None:intergenic |
| TCAACTTGGTCACCAGAAAA+TGG | 0.313030 | 7.2:+20035791 | None:intergenic |
| GAATTTGTACTCAAGCAAAT+TGG | 0.323192 | 7.2:-20035866 | MS.gene26649:CDS |
| TAAAGAGCCTTCACATTTAA+GGG | 0.343061 | 7.2:+20032808 | None:intergenic |
| TGACTATTGATCCTAATAAC+AGG | 0.392333 | 7.2:-20032717 | MS.gene26649:intron |
| ATACCACCTTCCTTAGCATA+TGG | 0.402959 | 7.2:-20035324 | MS.gene26649:CDS |
| ATGCTTATCAAATCTGATAA+AGG | 0.408014 | 7.2:-20034944 | MS.gene26649:CDS |
| TCTTGAGTTGTGAACTCAAA+AGG | 0.411624 | 7.2:+20033831 | None:intergenic |
| TAGAATCCAATTATGATAAA+GGG | 0.426358 | 7.2:-20035627 | MS.gene26649:CDS |
| CTCAAGCAAATTGGAAATGA+AGG | 0.438893 | 7.2:-20035857 | MS.gene26649:CDS |
| AAAATTGTTACTGATATCAT+AGG | 0.452082 | 7.2:-20034259 | MS.gene26649:CDS |
| TCTTTAGCACAATGGTTTCA+AGG | 0.453183 | 7.2:-20032317 | MS.gene26649:CDS |
| TGATGGAAATCTGCTATTCA+AGG | 0.462612 | 7.2:-20033363 | MS.gene26649:CDS |
| GTAATCAAAGGTTGGGATGA+AGG | 0.465069 | 7.2:-20035387 | MS.gene26649:CDS |
| AATTAACATCAAACTTGAGC+TGG | 0.466397 | 7.2:-20034290 | MS.gene26649:CDS |
| AGAGCTCAAAATGAAGCAAA+AGG | 0.469122 | 7.2:-20032364 | MS.gene26649:CDS |
| ATGAAGCAAGGCTTGAAAAT+GGG | 0.472246 | 7.2:-20034967 | MS.gene26649:CDS |
| TCAAACTTGAGCTGGTATCA+TGG | 0.473440 | 7.2:-20034282 | MS.gene26649:CDS |
| TACCACCTTCCTTAGCATAT+GGG | 0.479812 | 7.2:-20035323 | MS.gene26649:CDS |
| ACAGTCATATATTTATGTAA+AGG | 0.483204 | 7.2:-20033897 | MS.gene26649:intron |
| TGTCTTTACTGCAATGCTCA+TGG | 0.495400 | 7.2:+20034557 | None:intergenic |
| TTGGCCTAATTTGAAATGAA+AGG | 0.504691 | 7.2:+20035600 | None:intergenic |
| TGTGACCATAATAATTTGCA+AGG | 0.505868 | 7.2:-20033613 | MS.gene26649:CDS |
| TCATAATTGGATTCTAGAGA+TGG | 0.508312 | 7.2:+20035634 | None:intergenic |
| ACTAAACAGATTCTTAGAAA+AGG | 0.511190 | 7.2:-20035830 | MS.gene26649:CDS |
| AATAAGAGAAGGAGAAGGAT+GGG | 0.511511 | 7.2:-20035184 | MS.gene26649:CDS |
| AGGTGAAGTAATCAAAGGTT+GGG | 0.511565 | 7.2:-20035394 | MS.gene26649:CDS |
| AAAATTAATAAAGCCGGTGA+AGG | 0.513957 | 7.2:-20034217 | MS.gene26649:CDS |
| GCAGTAAAGACAATGAGAAA+AGG | 0.518776 | 7.2:-20034546 | MS.gene26649:CDS |
| CAGTAAATCATCAAGCTCAA+TGG | 0.519142 | 7.2:+20034324 | None:intergenic |
| TTTCATTTCAAATTAGGCCA+AGG | 0.520262 | 7.2:-20035598 | MS.gene26649:intron |
| TTTACTGCAATGCTCATGGC+TGG | 0.520910 | 7.2:+20034561 | None:intergenic |
| TGCATCCAAGAAATATGAAA+AGG | 0.524048 | 7.2:-20033324 | MS.gene26649:intron |
| TTCACATGTGATCCTTCGTT+AGG | 0.525931 | 7.2:+20034184 | None:intergenic |
| CAGGTGAAGTAATCAAAGGT+TGG | 0.528283 | 7.2:-20035395 | MS.gene26649:CDS |
| TTTGAGTTCACAACTCAAGA+AGG | 0.528628 | 7.2:-20033828 | MS.gene26649:intron |
| GAGTTGCTACAATGAAGAAA+GGG | 0.530264 | 7.2:-20035365 | MS.gene26649:CDS |
| TATTTATGTAAAGGAGAAGA+TGG | 0.534404 | 7.2:-20033888 | MS.gene26649:CDS |
| GGAGTTGCTACAATGAAGAA+AGG | 0.534709 | 7.2:-20035366 | MS.gene26649:CDS |
| TTCTTAGAAAAGGTGTCACT+TGG | 0.537175 | 7.2:-20035820 | MS.gene26649:CDS |
| AGGACGATCAAACCCTTCAC+CGG | 0.540522 | 7.2:+20034204 | None:intergenic |
| TAACAGTGAAATATGAAGCA+AGG | 0.549042 | 7.2:-20034979 | MS.gene26649:intron |
| TTGAGATTGAAATGTTGTGT+TGG | 0.551476 | 7.2:-20035254 | MS.gene26649:CDS |
| ATCAGAGACTTGACTGGTGA+TGG | 0.554130 | 7.2:-20035225 | MS.gene26649:CDS |
| TCCCCATATGCTAAGGAAGG+TGG | 0.559182 | 7.2:+20035321 | None:intergenic |
| TAATAATTTGCAAGGAAACA+AGG | 0.565902 | 7.2:-20033605 | MS.gene26649:CDS |
| AAAGAGCTTGATGAAGTGCT+AGG | 0.570967 | 7.2:-20035153 | MS.gene26649:intron |
| AAGACAATAAGAGAAGGAGA+AGG | 0.572354 | 7.2:-20035189 | MS.gene26649:CDS |
| ACCACCTTCCTTAGCATATG+GGG | 0.572462 | 7.2:-20035322 | MS.gene26649:CDS |
| CAATAAGAGAAGGAGAAGGA+TGG | 0.574904 | 7.2:-20035185 | MS.gene26649:CDS |
| TATTGAGAGGAAAGGATCAA+AGG | 0.577291 | 7.2:-20033859 | MS.gene26649:CDS |
| TGTGAGCAGAAGAAGCATGA+TGG | 0.577588 | 7.2:-20033380 | MS.gene26649:CDS |
| GTTGCAGGTGAAGTAATCAA+AGG | 0.579564 | 7.2:-20035399 | MS.gene26649:intron |
| ACAAGATCCCTTAAATGTGA+AGG | 0.580434 | 7.2:-20032815 | MS.gene26649:CDS |
| AAGAGTACACTGAAGCTGCT+AGG | 0.591567 | 7.2:-20033095 | MS.gene26649:CDS |
| TAACGAAGGATCACATGTGA+AGG | 0.593129 | 7.2:-20034182 | MS.gene26649:CDS |
| AAATTAATAAAGCCGGTGAA+GGG | 0.595153 | 7.2:-20034216 | MS.gene26649:CDS |
| ATCTGACATCTTTAGCACAA+TGG | 0.595223 | 7.2:-20032325 | MS.gene26649:CDS |
| CAAATTACAGGATAATCTCA+AGG | 0.599451 | 7.2:+20033146 | None:intergenic |
| GCCTAATTTGAAATGAAAGG+AGG | 0.601174 | 7.2:+20035603 | None:intergenic |
| GGTACAATTATTGAGAGGAA+AGG | 0.602706 | 7.2:-20033867 | MS.gene26649:CDS |
| AAAATGAGGGATGCATTAGG+AGG | 0.604854 | 7.2:+20035276 | None:intergenic |
| AGAGACTTGACTGGTGATGG+AGG | 0.606419 | 7.2:-20035222 | MS.gene26649:CDS |
| TTTGATCACACATTCAATGA+CGG | 0.609000 | 7.2:-20033189 | MS.gene26649:CDS |
| ATACCTTAAAACATCAGACT+TGG | 0.621052 | 7.2:-20032770 | MS.gene26649:CDS |
| TATCAAATCTGATAAAGGTG+TGG | 0.628019 | 7.2:-20034939 | MS.gene26649:CDS |
| GACAATGAGAAAAGGCGAAG+TGG | 0.631461 | 7.2:-20034538 | MS.gene26649:CDS |
| AAGATGGTACAATTATTGAG+AGG | 0.636399 | 7.2:-20033872 | MS.gene26649:CDS |
| AACGAAGGATCACATGTGAA+GGG | 0.640374 | 7.2:-20034181 | MS.gene26649:intron |
| GTGGAGTTTAATGTAAGTGA+TGG | 0.656067 | 7.2:-20034920 | MS.gene26649:intron |
| AGTAGCATCAGAGACTTGAC+TGG | 0.659161 | 7.2:-20035231 | MS.gene26649:CDS |
| AGCTGCTAGGCTATGCACAA+AGG | 0.661120 | 7.2:-20033082 | MS.gene26649:intron |
| TGAATTAGTTGATTTCACCA+AGG | 0.661687 | 7.2:-20033554 | MS.gene26649:intron |
| GGGTTTGATCGTCCTAACGA+AGG | 0.667918 | 7.2:-20034196 | MS.gene26649:CDS |
| GATGCATTAGGAGGAATCAA+CGG | 0.669142 | 7.2:+20035285 | None:intergenic |
| AGTTGCTACAATGAAGAAAG+GGG | 0.680632 | 7.2:-20035364 | MS.gene26649:CDS |
| GCATTAGGAGGAATCAACGG+CGG | 0.735203 | 7.2:+20035288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAAATAATTTTAAAAAG+TGG | - | chr7.2:20035664-20035683 | MS.gene26649:CDS | 10.0% |
| !!! | CACTTTTTAAAATTATTTAT+TGG | + | chr7.2:20035666-20035685 | None:intergenic | 10.0% |
| !! | ATAAATTAACTTTGCAATAT+TGG | - | chr7.2:20035318-20035337 | MS.gene26649:CDS | 15.0% |
| !! | TTAATAATATGACTAATATC+AGG | - | chr7.2:20033813-20033832 | MS.gene26649:intron | 15.0% |
| !!! | AAATATCTTTTTACACTAAT+AGG | + | chr7.2:20033104-20033123 | None:intergenic | 15.0% |
| !!! | AATGAAATTCTTTATTGATT+TGG | - | chr7.2:20034966-20034985 | MS.gene26649:CDS | 15.0% |
| !!! | TGATTTATTTTTACTTTTGT+TGG | + | chr7.2:20034248-20034267 | None:intergenic | 15.0% |
| !! | AAAATTGTTACTGATATCAT+AGG | - | chr7.2:20033945-20033964 | MS.gene26649:intron | 20.0% |
| !! | ACAGTCATATATTTATGTAA+AGG | - | chr7.2:20034307-20034326 | MS.gene26649:CDS | 20.0% |
| !! | ATTAATGTTATACAAGAACA+AGG | - | chr7.2:20034405-20034424 | MS.gene26649:intron | 20.0% |
| !! | CATATGATTGAGAATAAATA+GGG | + | chr7.2:20035539-20035558 | None:intergenic | 20.0% |
| !! | CTAATTCAACTTCATAATAA+AGG | + | chr7.2:20034638-20034657 | None:intergenic | 20.0% |
| !! | CTGAAAAAAATTAATAAAGC+CGG | - | chr7.2:20033981-20034000 | MS.gene26649:intron | 20.0% |
| !! | GAAATGAATATGAAATTCTT+TGG | - | chr7.2:20032741-20032760 | MS.gene26649:CDS | 20.0% |
| !! | GTTAAATTAGTAGTATATGT+AGG | + | chr7.2:20033209-20033228 | None:intergenic | 20.0% |
| !! | TAGAATCCAATTATGATAAA+GGG | - | chr7.2:20032577-20032596 | MS.gene26649:intron | 20.0% |
| !! | TGAATAATTATTTGTTCACT+TGG | - | chr7.2:20035785-20035804 | MS.gene26649:intron | 20.0% |
| !! | TTAATGTTATACAAGAACAA+GGG | - | chr7.2:20034406-20034425 | MS.gene26649:intron | 20.0% |
| !! | TTGAACCTAATTATATATGT+CGG | - | chr7.2:20035693-20035712 | MS.gene26649:intron | 20.0% |
| !! | TTTGATGTTAGTGTTAAATT+AGG | - | chr7.2:20032765-20032784 | MS.gene26649:CDS | 20.0% |
| !!! | AGCATTAAAGACTTTATTTT+TGG | - | chr7.2:20033320-20033339 | MS.gene26649:intron | 20.0% |
| !!! | ATTTTTATTTTTGCTGCATA+AGG | - | chr7.2:20033773-20033792 | MS.gene26649:intron | 20.0% |
| ! | AAACAGTAGTAGATATTCAA+TGG | + | chr7.2:20033529-20033548 | None:intergenic | 25.0% |
| ! | AAGCGTTAATTAAGTGAATT+AGG | + | chr7.2:20035159-20035178 | None:intergenic | 25.0% |
| ! | AATTGATTGTACCTGTTATT+AGG | + | chr7.2:20035501-20035520 | None:intergenic | 25.0% |
| ! | ACATTTCAATCTCAAAAATG+AGG | + | chr7.2:20032945-20032964 | None:intergenic | 25.0% |
| ! | ACCATCTGATATTTATCTAA+CGG | - | chr7.2:20033451-20033470 | MS.gene26649:intron | 25.0% |
| ! | ACTAAACAGATTCTTAGAAA+AGG | - | chr7.2:20032374-20032393 | MS.gene26649:CDS | 25.0% |
| ! | AGTTAAAAATTTGACGGTTA+AGG | - | chr7.2:20034121-20034140 | MS.gene26649:intron | 25.0% |
| ! | ATCACATCTATTTATGTATG+AGG | + | chr7.2:20034058-20034077 | None:intergenic | 25.0% |
| ! | ATGAAAAAGACAATAAGAGA+AGG | - | chr7.2:20033009-20033028 | MS.gene26649:intron | 25.0% |
| ! | ATGCTTATCAAATCTGATAA+AGG | - | chr7.2:20033260-20033279 | MS.gene26649:intron | 25.0% |
| ! | CATTTCAATCTCAAAAATGA+GGG | + | chr7.2:20032944-20032963 | None:intergenic | 25.0% |
| ! | CTAGAATCCAATTATGATAA+AGG | - | chr7.2:20032576-20032595 | MS.gene26649:intron | 25.0% |
| ! | GACAGTAGTTAAAAATTTGA+CGG | - | chr7.2:20034115-20034134 | MS.gene26649:intron | 25.0% |
| ! | GCATATGATTGAGAATAAAT+AGG | + | chr7.2:20035540-20035559 | None:intergenic | 25.0% |
| ! | TATTTATGTAAAGGAGAAGA+TGG | - | chr7.2:20034316-20034335 | MS.gene26649:CDS | 25.0% |
| ! | TGTTTCCTTGCAAATTATTA+TGG | + | chr7.2:20034599-20034618 | None:intergenic | 25.0% |
| ! | TTAGGCTAAGTTATTGAATT+TGG | - | chr7.2:20032783-20032802 | MS.gene26649:CDS | 25.0% |
| !! | ACTTTTGTTGGAAATAGATT+CGG | + | chr7.2:20034236-20034255 | None:intergenic | 25.0% |
| !! | TAATAATTTGCAAGGAAACA+AGG | - | chr7.2:20034599-20034618 | MS.gene26649:intron | 25.0% |
| !! | TATCATTGTTTGTGATTTGT+TGG | + | chr7.2:20033139-20033158 | None:intergenic | 25.0% |
| !! | TTTCTGTCTATAATTTTCGT+CGG | + | chr7.2:20032675-20032694 | None:intergenic | 25.0% |
| !!! | ACGTTTTCAATCTAATTTGT+TGG | - | chr7.2:20035731-20035750 | MS.gene26649:intron | 25.0% |
| !!! | CTTTATTGATTTGGTATTGT+AGG | - | chr7.2:20034975-20034994 | MS.gene26649:CDS | 25.0% |
| AAAATTAATAAAGCCGGTGA+AGG | - | chr7.2:20033987-20034006 | MS.gene26649:intron | 30.0% | |
| AAATTAATAAAGCCGGTGAA+GGG | - | chr7.2:20033988-20034007 | MS.gene26649:intron | 30.0% | |
| AAGATGGTACAATTATTGAG+AGG | - | chr7.2:20034332-20034351 | MS.gene26649:CDS | 30.0% | |
| AAGTTATTGAATTTGGTTGC+AGG | - | chr7.2:20032790-20032809 | MS.gene26649:CDS | 30.0% | |
| AATTAACATCAAACTTGAGC+TGG | - | chr7.2:20033914-20033933 | MS.gene26649:intron | 30.0% | |
| ATACCTTAAAACATCAGACT+TGG | - | chr7.2:20035434-20035453 | MS.gene26649:intron | 30.0% | |
| ATAGAATACTGATCAATCTC+TGG | - | chr7.2:20033595-20033614 | MS.gene26649:CDS | 30.0% | |
| CAAATTACAGGATAATCTCA+AGG | + | chr7.2:20035061-20035080 | None:intergenic | 30.0% | |
| CAACACCGACATATATAATT+AGG | + | chr7.2:20035701-20035720 | None:intergenic | 30.0% | |
| CAATTCAAAACATCAACACA+TGG | - | chr7.2:20034709-20034728 | MS.gene26649:intron | 30.0% | |
| CTAATTATATATGTCGGTGT+TGG | - | chr7.2:20035699-20035718 | MS.gene26649:intron | 30.0% | |
| CTACATCTGTCTTAATAGAA+AGG | + | chr7.2:20035222-20035241 | None:intergenic | 30.0% | |
| GAATTTGTACTCAAGCAAAT+TGG | - | chr7.2:20032338-20032357 | MS.gene26649:CDS | 30.0% | |
| GATATAGTTAGAGAGTGATA+TGG | + | chr7.2:20032449-20032468 | None:intergenic | 30.0% | |
| TAAAGAGCCTTCACATTTAA+GGG | + | chr7.2:20035399-20035418 | None:intergenic | 30.0% | |
| TAACAGTGAAATATGAAGCA+AGG | - | chr7.2:20033225-20033244 | MS.gene26649:intron | 30.0% | |
| TAGAATACTGATCAATCTCT+GGG | - | chr7.2:20033596-20033615 | MS.gene26649:CDS | 30.0% | |
| TATCAAATCTGATAAAGGTG+TGG | - | chr7.2:20033265-20033284 | MS.gene26649:intron | 30.0% | |
| TATTCAAGGCTCAAAATTTC+AGG | - | chr7.2:20034855-20034874 | MS.gene26649:intron | 30.0% | |
| TCCTCCTTTCATTTCAAATT+AGG | - | chr7.2:20032600-20032619 | MS.gene26649:intron | 30.0% | |
| TGACTATTGATCCTAATAAC+AGG | - | chr7.2:20035487-20035506 | MS.gene26649:intron | 30.0% | |
| TGCATCCAAGAAATATGAAA+AGG | - | chr7.2:20034880-20034899 | MS.gene26649:intron | 30.0% | |
| TGGTACAAACATAAAACAAG+TGG | + | chr7.2:20032471-20032490 | None:intergenic | 30.0% | |
| TGTACCATAAGTCAGATAAA+GGG | - | chr7.2:20032484-20032503 | MS.gene26649:intron | 30.0% | |
| TGTCAATATCATGTCTAATG+TGG | + | chr7.2:20035629-20035648 | None:intergenic | 30.0% | |
| TTGAGATTGAAATGTTGTGT+TGG | - | chr7.2:20032950-20032969 | MS.gene26649:intron | 30.0% | |
| TTGTACCATAAGTCAGATAA+AGG | - | chr7.2:20032483-20032502 | MS.gene26649:intron | 30.0% | |
| TTTCATTTCAAATTAGGCCA+AGG | - | chr7.2:20032606-20032625 | MS.gene26649:intron | 30.0% | |
| TTTGATCACACATTCAATGA+CGG | - | chr7.2:20035015-20035034 | MS.gene26649:intron | 30.0% | |
| ! | AATAAACAAGGTACTTACCT+TGG | + | chr7.2:20032626-20032645 | None:intergenic | 30.0% |
| ! | AATATTGACTGCAGAGAATT+TGG | - | chr7.2:20033501-20033520 | MS.gene26649:intron | 30.0% |
| ! | ATGGTTTTTAACCTTCAACT+TGG | + | chr7.2:20032430-20032449 | None:intergenic | 30.0% |
| ! | TCATAATTGGATTCTAGAGA+TGG | + | chr7.2:20032573-20032592 | None:intergenic | 30.0% |
| ! | TGAATTAGTTGATTTCACCA+AGG | - | chr7.2:20034650-20034669 | MS.gene26649:intron | 30.0% |
| ! | TGAGTTTCCATTTTCCAAAA+TGG | + | chr7.2:20034788-20034807 | None:intergenic | 30.0% |
| ! | TGCTGCTTGTAAACTTAAAT+TGG | - | chr7.2:20035086-20035105 | MS.gene26649:intron | 30.0% |
| ! | TGTGACCATAATAATTTGCA+AGG | - | chr7.2:20034591-20034610 | MS.gene26649:intron | 30.0% |
| ! | TTGGCCTAATTTGAAATGAA+AGG | + | chr7.2:20032607-20032626 | None:intergenic | 30.0% |
| ! | TTTAGAGGACAAGTTGAAAA+TGG | - | chr7.2:20032546-20032565 | MS.gene26649:intron | 30.0% |
| !! | GTGTTGATGTTTTGAATTGA+TGG | + | chr7.2:20034708-20034727 | None:intergenic | 30.0% |
| AAGACAATAAGAGAAGGAGA+AGG | - | chr7.2:20033015-20033034 | MS.gene26649:intron | 35.0% | |
| AATAAGAGAAGGAGAAGGAT+GGG | - | chr7.2:20033020-20033039 | MS.gene26649:intron | 35.0% | |
| ACAAGATCCCTTAAATGTGA+AGG | - | chr7.2:20035389-20035408 | MS.gene26649:CDS | 35.0% | |
| AGAGCTCAAAATGAAGCAAA+AGG | - | chr7.2:20035840-20035859 | MS.gene26649:CDS | 35.0% | |
| AGCAGCATTGTTCAAATTAC+AGG | + | chr7.2:20035073-20035092 | None:intergenic | 35.0% | |
| AGGTGAAGTAATCAAAGGTT+GGG | - | chr7.2:20032810-20032829 | MS.gene26649:CDS | 35.0% | |
| AGTTGATCATGTCTTGAAAC+AGG | - | chr7.2:20035359-20035378 | MS.gene26649:CDS | 35.0% | |
| AGTTGCTACAATGAAGAAAG+GGG | - | chr7.2:20032840-20032859 | MS.gene26649:intron | 35.0% | |
| ATCTGACATCTTTAGCACAA+TGG | - | chr7.2:20035879-20035898 | MS.gene26649:CDS | 35.0% | |
| ATGAAGCAAGGCTTGAAAAT+GGG | - | chr7.2:20033237-20033256 | MS.gene26649:intron | 35.0% | |
| ATGACCCTTTATCTGACTTA+TGG | + | chr7.2:20032491-20032510 | None:intergenic | 35.0% | |
| CAATGTCCATGTATTGTCTA+TGG | + | chr7.2:20035606-20035625 | None:intergenic | 35.0% | |
| CAATGTGAGTCATTCAATCT+CGG | - | chr7.2:20034170-20034189 | MS.gene26649:intron | 35.0% | |
| CAGTAAATCATCAAGCTCAA+TGG | + | chr7.2:20033883-20033902 | None:intergenic | 35.0% | |
| CATTTAAGGGATCTTGTTCT+AGG | + | chr7.2:20035386-20035405 | None:intergenic | 35.0% | |
| CTAGCAGTATGCAATAAACA+AGG | + | chr7.2:20032638-20032657 | None:intergenic | 35.0% | |
| CTCAAGCAAATTGGAAATGA+AGG | - | chr7.2:20032347-20032366 | MS.gene26649:CDS | 35.0% | |
| GAGTTGCTACAATGAAGAAA+GGG | - | chr7.2:20032839-20032858 | MS.gene26649:intron | 35.0% | |
| GCAGTAAAGACAATGAGAAA+AGG | - | chr7.2:20033658-20033677 | MS.gene26649:CDS | 35.0% | |
| GCCGTTAGATAAATATCAGA+TGG | + | chr7.2:20033455-20033474 | None:intergenic | 35.0% | |
| GGTACAATTATTGAGAGGAA+AGG | - | chr7.2:20034337-20034356 | MS.gene26649:CDS | 35.0% | |
| GTAAAGAGCCTTCACATTTA+AGG | + | chr7.2:20035400-20035419 | None:intergenic | 35.0% | |
| GTGGAGTTTAATGTAAGTGA+TGG | - | chr7.2:20033284-20033303 | MS.gene26649:intron | 35.0% | |
| TACATAGAAGAAGCTAACCT+TGG | + | chr7.2:20034670-20034689 | None:intergenic | 35.0% | |
| TATGAAGCAAGGCTTGAAAA+TGG | - | chr7.2:20033236-20033255 | MS.gene26649:intron | 35.0% | |
| TATTGAGAGGAAAGGATCAA+AGG | - | chr7.2:20034345-20034364 | MS.gene26649:CDS | 35.0% | |
| TCAAAAATGAGGGATGCATT+AGG | + | chr7.2:20032934-20032953 | None:intergenic | 35.0% | |
| TCAAAGAAATCATGCACACA+TGG | - | chr7.2:20034916-20034935 | MS.gene26649:intron | 35.0% | |
| TCGCTCTGTCTCATATTAAA+CGG | - | chr7.2:20035270-20035289 | MS.gene26649:CDS | 35.0% | |
| TCTTTAGCACAATGGTTTCA+AGG | - | chr7.2:20035887-20035906 | MS.gene26649:CDS | 35.0% | |
| TGATGGAAATCTGCTATTCA+AGG | - | chr7.2:20034841-20034860 | MS.gene26649:intron | 35.0% | |
| ! | CACCTTTCAGTTCATTTTAG+AGG | - | chr7.2:20032531-20032550 | MS.gene26649:intron | 35.0% |
| ! | CATTGAGCTTGATGATTTAC+TGG | - | chr7.2:20033881-20033900 | MS.gene26649:CDS | 35.0% |
| ! | GCAGACCTTTTCATATTTCT+TGG | + | chr7.2:20034888-20034907 | None:intergenic | 35.0% |
| ! | GCCTAATTTGAAATGAAAGG+AGG | + | chr7.2:20032604-20032623 | None:intergenic | 35.0% |
| ! | TCAGGACATAATTTTGCAGA+TGG | - | chr7.2:20033831-20033850 | MS.gene26649:CDS | 35.0% |
| ! | TCTCCAAGTCTGATGTTTTA+AGG | + | chr7.2:20035440-20035459 | None:intergenic | 35.0% |
| ! | TCTTGAGTTGTGAACTCAAA+AGG | + | chr7.2:20034376-20034395 | None:intergenic | 35.0% |
| ! | TTTGAGTTCACAACTCAAGA+AGG | - | chr7.2:20034376-20034395 | MS.gene26649:intron | 35.0% |
| ! | TTTTCAGAACAAGTGCATGA+CGG | - | chr7.2:20034498-20034517 | MS.gene26649:intron | 35.0% |
| ! | TTTTTGCAACTACTGTGATC+AGG | - | chr7.2:20034757-20034776 | MS.gene26649:intron | 35.0% |
| !! | GTCCTCTAAAATGAACTGAA+AGG | + | chr7.2:20032536-20032555 | None:intergenic | 35.0% |
| !! | TTCTTAGAAAAGGTGTCACT+TGG | - | chr7.2:20032384-20032403 | MS.gene26649:CDS | 35.0% |
| !!! | CTGATGTTTTAAGGTATGCT+TGG | + | chr7.2:20035431-20035450 | None:intergenic | 35.0% |
| AAAATGAGGGATGCATTAGG+AGG | + | chr7.2:20032931-20032950 | None:intergenic | 40.0% | |
| AACGAAGGATCACATGTGAA+GGG | - | chr7.2:20034023-20034042 | MS.gene26649:intron | 40.0% | |
| ATACCACCTTCCTTAGCATA+TGG | - | chr7.2:20032880-20032899 | MS.gene26649:intron | 40.0% | |
| CAAATGAAAACTCGAGACCT+CGG | + | chr7.2:20033414-20033433 | None:intergenic | 40.0% | |
| CAATAAGAGAAGGAGAAGGA+TGG | - | chr7.2:20033019-20033038 | MS.gene26649:intron | 40.0% | |
| CAGGTGAAGTAATCAAAGGT+TGG | - | chr7.2:20032809-20032828 | MS.gene26649:CDS | 40.0% | |
| CCACTACCATAGACAATACA+TGG | - | chr7.2:20035597-20035616 | MS.gene26649:intron | 40.0% | |
| CCATGTATTGTCTATGGTAG+TGG | + | chr7.2:20035600-20035619 | None:intergenic | 40.0% | |
| GAAAAAAGCAGAACAAGCTC+TGG | - | chr7.2:20034545-20034564 | MS.gene26649:CDS | 40.0% | |
| GATAGAATATCAGATGACCG+AGG | - | chr7.2:20033394-20033413 | MS.gene26649:CDS | 40.0% | |
| GATGCATTAGGAGGAATCAA+CGG | + | chr7.2:20032922-20032941 | None:intergenic | 40.0% | |
| GGAGGACCCTTTATCATAAT+TGG | + | chr7.2:20032586-20032605 | None:intergenic | 40.0% | |
| GGAGTTGCTACAATGAAGAA+AGG | - | chr7.2:20032838-20032857 | MS.gene26649:intron | 40.0% | |
| GTAATCAAAGGTTGGGATGA+AGG | - | chr7.2:20032817-20032836 | MS.gene26649:CDS | 40.0% | |
| GTGCATGATTTCTTTGATCG+CGG | + | chr7.2:20034913-20034932 | None:intergenic | 40.0% | |
| GTTGCAGGTGAAGTAATCAA+AGG | - | chr7.2:20032805-20032824 | MS.gene26649:CDS | 40.0% | |
| TAACGAAGGATCACATGTGA+AGG | - | chr7.2:20034022-20034041 | MS.gene26649:intron | 40.0% | |
| TACCACCTTCCTTAGCATAT+GGG | - | chr7.2:20032881-20032900 | MS.gene26649:intron | 40.0% | |
| TCAAACTTGAGCTGGTATCA+TGG | - | chr7.2:20033922-20033941 | MS.gene26649:intron | 40.0% | |
| TCAACTTGGTCACCAGAAAA+TGG | + | chr7.2:20032416-20032435 | None:intergenic | 40.0% | |
| TCCTTAGCATATGGGGAAAA+AGG | - | chr7.2:20032889-20032908 | MS.gene26649:intron | 40.0% | |
| TGTCTTTACTGCAATGCTCA+TGG | + | chr7.2:20033650-20033669 | None:intergenic | 40.0% | |
| TTCACATGTGATCCTTCGTT+AGG | + | chr7.2:20034023-20034042 | None:intergenic | 40.0% | |
| ! | AAAGAGCTTGATGAAGTGCT+AGG | - | chr7.2:20033051-20033070 | MS.gene26649:intron | 40.0% |
| ! | ACCTTTTTCCCCATATGCTA+AGG | + | chr7.2:20032893-20032912 | None:intergenic | 40.0% |
| ! | ACTTGGCAAACTCCATTTTC+TGG | - | chr7.2:20032401-20032420 | MS.gene26649:intron | 40.0% |
| ! | AGCACTTCATCAAGCTCTTT+TGG | + | chr7.2:20033051-20033070 | None:intergenic | 40.0% |
| ! | TTTTCCCCATATGCTAAGGA+AGG | + | chr7.2:20032889-20032908 | None:intergenic | 40.0% |
| !! | ATCTCTGGGATGCTTCAATT+AGG | - | chr7.2:20033610-20033629 | MS.gene26649:CDS | 40.0% |
| !! | GGAGAAGCCATTTTGGAAAA+TGG | - | chr7.2:20034778-20034797 | MS.gene26649:intron | 40.0% |
| !! | TTTTCTGGTGACCAAGTTGA+AGG | - | chr7.2:20032416-20032435 | MS.gene26649:intron | 40.0% |
| ACAGTCACTACTGTCGATGA+TGG | - | chr7.2:20034092-20034111 | MS.gene26649:intron | 45.0% | |
| ACCACCTTCCTTAGCATATG+GGG | - | chr7.2:20032882-20032901 | MS.gene26649:intron | 45.0% | |
| AGTAGCATCAGAGACTTGAC+TGG | - | chr7.2:20032973-20032992 | MS.gene26649:intron | 45.0% | |
| ATCAGAGACTTGACTGGTGA+TGG | - | chr7.2:20032979-20032998 | MS.gene26649:intron | 45.0% | |
| CAGTCACTACTGTCGATGAT+GGG | - | chr7.2:20034093-20034112 | MS.gene26649:intron | 45.0% | |
| CATCGACAGTAGTGACTGTT+GGG | + | chr7.2:20034091-20034110 | None:intergenic | 45.0% | |
| GACAATGAGAAAAGGCGAAG+TGG | - | chr7.2:20033666-20033685 | MS.gene26649:CDS | 45.0% | |
| TCATCGACAGTAGTGACTGT+TGG | + | chr7.2:20034092-20034111 | None:intergenic | 45.0% | |
| TTTACTGCAATGCTCATGGC+TGG | + | chr7.2:20033646-20033665 | None:intergenic | 45.0% | |
| ! | AAGAGTACACTGAAGCTGCT+AGG | - | chr7.2:20035109-20035128 | MS.gene26649:intron | 45.0% |
| ! | GTGATCAGGAGAAGCCATTT+TGG | - | chr7.2:20034771-20034790 | MS.gene26649:intron | 45.0% |
| ! | TGTGAGCAGAAGAAGCATGA+TGG | - | chr7.2:20034824-20034843 | MS.gene26649:intron | 45.0% |
| AGCTGCTAGGCTATGCACAA+AGG | - | chr7.2:20035122-20035141 | MS.gene26649:intron | 50.0% | |
| AGGACGATCAAACCCTTCAC+CGG | + | chr7.2:20034003-20034022 | None:intergenic | 50.0% | |
| GCATTAGGAGGAATCAACGG+CGG | + | chr7.2:20032919-20032938 | None:intergenic | 50.0% | |
| GGGTTTGATCGTCCTAACGA+AGG | - | chr7.2:20034008-20034027 | MS.gene26649:intron | 50.0% | |
| TCCCCATATGCTAAGGAAGG+TGG | + | chr7.2:20032886-20032905 | None:intergenic | 50.0% | |
| !! | AGAGACTTGACTGGTGATGG+AGG | - | chr7.2:20032982-20033001 | MS.gene26649:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 20032308 | 20035918 | 20032308 | ID=MS.gene26649 |
| chr7.2 | mRNA | 20032308 | 20035918 | 20032308 | ID=MS.gene26649.t1;Parent=MS.gene26649 |
| chr7.2 | exon | 20035789 | 20035918 | 20035789 | ID=MS.gene26649.t1.exon1;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20035789 | 20035918 | 20035789 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20035599 | 20035685 | 20035599 | ID=MS.gene26649.t1.exon2;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20035599 | 20035685 | 20035599 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20035154 | 20035414 | 20035154 | ID=MS.gene26649.t1.exon3;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20035154 | 20035414 | 20035154 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20034921 | 20034995 | 20034921 | ID=MS.gene26649.t1.exon4;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20034921 | 20034995 | 20034921 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20034514 | 20034594 | 20034514 | ID=MS.gene26649.t1.exon5;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20034514 | 20034594 | 20034514 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20034182 | 20034376 | 20034182 | ID=MS.gene26649.t1.exon6;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20034182 | 20034376 | 20034182 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20033829 | 20033915 | 20033829 | ID=MS.gene26649.t1.exon7;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20033829 | 20033915 | 20033829 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20033555 | 20033721 | 20033555 | ID=MS.gene26649.t1.exon8;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20033555 | 20033721 | 20033555 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20033325 | 20033447 | 20033325 | ID=MS.gene26649.t1.exon9;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20033325 | 20033447 | 20033325 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20033083 | 20033229 | 20033083 | ID=MS.gene26649.t1.exon10;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20033083 | 20033229 | 20033083 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20032718 | 20032845 | 20032718 | ID=MS.gene26649.t1.exon11;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20032718 | 20032845 | 20032718 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| chr7.2 | exon | 20032308 | 20032407 | 20032308 | ID=MS.gene26649.t1.exon12;Parent=MS.gene26649.t1 |
| chr7.2 | CDS | 20032308 | 20032407 | 20032308 | ID=cds.MS.gene26649.t1;Parent=MS.gene26649.t1 |
| Gene Sequence |
| Protein sequence |
