AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34272


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34272.t1 MTR_8g464010 96.855 318 10 0 1 318 85 402 0.0 626
MS.gene34272.t1 MTR_7g117530 41.538 130 76 0 1 130 102 231 9.47e-25 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34272.t1 AT1G53250 57.463 134 57 0 2 135 105 238 1.15e-46 161
MS.gene34272.t1 AT1G53250 40.000 175 99 3 141 315 185 353 7.13e-20 89.4
MS.gene34272.t1 AT1G53800 41.379 116 68 0 1 116 111 226 9.50e-22 95.9
MS.gene34272.t1 AT1G53800 41.379 116 68 0 1 116 111 226 9.50e-22 95.9
MS.gene34272.t1 AT1G53800 41.379 116 68 0 1 116 107 222 1.01e-21 95.9

Find 66 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACCACTCCCTCCTTTCT+TGG 0.150737 8.4:-46263065 None:intergenic
TTTACTGTGAGTTGGAAAAT+TGG 0.201449 8.4:-46264266 None:intergenic
CCCTCCTTTCTTTGCTGATT+TGG 0.211087 8.4:-46263233 None:intergenic
CAGAGACCCGTGAGCGAATT+AGG 0.225851 8.4:+46259626 MS.gene34272:intron
AGGAAAAGTACCTTGGAATA+AGG 0.265892 8.4:+46259510 MS.gene34272:CDS
TTTCCTCTGCCTGCAGAATT+CGG 0.363745 8.4:-46263141 None:intergenic
ACAGGCTGCTAAAGTCATAA+AGG 0.374651 8.4:+46264351 MS.gene34272:CDS
CTGAACATCCCCGTTGTCAT+AGG 0.379002 8.4:+46260073 MS.gene34272:CDS
GTTATTCTCTGAGACGTGTC+TGG 0.381332 8.4:+46262969 MS.gene34272:CDS
TTGTGTTTACCTATGACAAC+GGG 0.385549 8.4:-46260082 None:intergenic
GTGGTCAAGTTGAGTTAGAT+TGG 0.386066 8.4:+46263080 MS.gene34272:CDS
CAAATAAATTATTTCATTTG+TGG 0.389580 8.4:+46263197 MS.gene34272:CDS
GTGGAGAAGAAGAACTTGAT+TGG 0.402138 8.4:+46263257 MS.gene34272:CDS
GGAAAAGTACCTTGGAATAA+GGG 0.402627 8.4:+46259511 MS.gene34272:CDS
CAGGCTGCTAAAGTCATAAA+GGG 0.412194 8.4:+46264352 MS.gene34272:CDS
AATTAGGATGAGAACATTAG+AGG 0.421479 8.4:+46259642 MS.gene34272:CDS
GAAAAGCTGATGACCATTGT+TGG 0.429142 8.4:+46263172 MS.gene34272:CDS
TGGAGAAGAAGAACTTGATT+GGG 0.436550 8.4:+46263258 MS.gene34272:CDS
AAATCCAATTTACTGTGAGT+TGG 0.446177 8.4:-46264274 None:intergenic
GAGAACATTAGAGGCTTTGA+AGG 0.459307 8.4:+46259651 MS.gene34272:CDS
AATTCTGCAGGCAGAGGAAA+AGG 0.466502 8.4:+46263144 MS.gene34272:CDS
CGACTGAAGTCACAGCGGGC+AGG 0.473175 8.4:+46262998 MS.gene34272:CDS
TGTTTCCTTCCCTTATTCCA+AGG 0.489715 8.4:-46259520 None:intergenic
AGAATGAGGAGAATGAGAAT+AGG 0.494493 8.4:+46259475 None:intergenic
TGGTCAAGTTGAGTTAGATT+GGG 0.498542 8.4:+46263081 MS.gene34272:CDS
CAAAATAAAAGCGGAGAAAG+AGG 0.500535 8.4:+46263366 MS.gene34272:CDS
ACTTGGCTCTAAATTAACTA+AGG 0.501762 8.4:+46263537 MS.gene34272:CDS
GTCACTTGCAGATCAGATAC+AGG 0.506576 8.4:+46264333 MS.gene34272:CDS
GAAGGCAAAGGCCAAAGAGA+TGG 0.510646 8.4:+46263342 MS.gene34272:CDS
GACTGAAGTCACAGCGGGCA+GGG 0.513912 8.4:+46262999 MS.gene34272:CDS
TGAGTTCCACCGAATTCTGC+AGG 0.515380 8.4:+46263132 MS.gene34272:CDS
GTTACTCAAGAATTCAAACT+TGG 0.519014 8.4:+46263520 MS.gene34272:CDS
ACTGAAGTCACAGCGGGCAG+GGG 0.520282 8.4:+46263000 MS.gene34272:CDS
TAATTTATTTGTTCCAACAA+TGG 0.521031 8.4:-46263185 None:intergenic
TAAATTATTTCATTTGTGGA+CGG 0.522542 8.4:+46263201 MS.gene34272:CDS
TTCTCATCCTAATTCGCTCA+CGG 0.524851 8.4:-46259633 None:intergenic
TCAGCAAAGAAAGGAGGGAG+TGG 0.535966 8.4:+46263238 MS.gene34272:CDS
ATAGCAAATGCAGCCAAGAA+AGG 0.538382 8.4:+46263052 MS.gene34272:CDS
CAAACAAAGGAAAAGTACCT+TGG 0.546625 8.4:+46259503 MS.gene34272:CDS
CCACCGAATTCTGCAGGCAG+AGG 0.552374 8.4:+46263138 MS.gene34272:CDS
GCAAATGCAGCCAAGAAAGG+AGG 0.553430 8.4:+46263055 MS.gene34272:CDS
CCTCTGCCTGCAGAATTCGG+TGG 0.556848 8.4:-46263138 None:intergenic
ATAGCCAAATCAGCAAAGAA+AGG 0.558567 8.4:+46263229 MS.gene34272:CDS
CCAAATCAGCAAAGAAAGGA+GGG 0.563567 8.4:+46263233 MS.gene34272:CDS
CAAATGCAGCCAAGAAAGGA+GGG 0.563593 8.4:+46263056 MS.gene34272:CDS
CTTGTGTTTACCTATGACAA+CGG 0.564622 8.4:-46260083 None:intergenic
AGAGCGACTGAAGTCACAGC+GGG 0.564801 8.4:+46262994 MS.gene34272:CDS
GCCAAATCAGCAAAGAAAGG+AGG 0.565416 8.4:+46263232 MS.gene34272:CDS
TTCCTGCAGTGATCAGATCA+AGG 0.567895 8.4:+46262937 MS.gene34272:intron
TTATTCTCTGAGACGTGTCT+GGG 0.580357 8.4:+46262970 MS.gene34272:CDS
TCTCATCCTAATTCGCTCAC+GGG 0.585592 8.4:-46259632 None:intergenic
AGAAGTGAAGTAGCTAGAGA+AGG 0.590861 8.4:+46264229 MS.gene34272:CDS
GCTTCAGCGTATTACAGAGA+AGG 0.596431 8.4:+46263324 MS.gene34272:CDS
AAGTACCTTGGAATAAGGGA+AGG 0.596523 8.4:+46259515 MS.gene34272:CDS
GCAGCCAAGAAAGGAGGGAG+TGG 0.599753 8.4:+46263061 MS.gene34272:CDS
GAATTCTTGAGTAACATCCT+CGG 0.607837 8.4:-46263512 None:intergenic
AGAGGCTTTGAAGGACCCCA+AGG 0.638810 8.4:+46259660 MS.gene34272:CDS
AAGGGAAGGAAACACACTGC+AGG 0.642716 8.4:+46259529 MS.gene34272:CDS
AGAATAGGACTAGCAAACAA+AGG 0.645416 8.4:+46259490 MS.gene34272:CDS
AGAGAAAAGATCTCCGAGAG+AGG 0.649225 8.4:+46263428 MS.gene34272:CDS
AGGCTGCTAAAGTCATAAAG+GGG 0.659129 8.4:+46264353 MS.gene34272:CDS
GCGTATTACAGAGAAGGCAA+AGG 0.664179 8.4:+46263330 MS.gene34272:CDS
AGAGATGGCCAAAATAAAAG+CGG 0.667301 8.4:+46263357 MS.gene34272:CDS
AGAGGAAGACAAATGTGCCG+AGG 0.686719 8.4:+46263495 MS.gene34272:CDS
AAGAGCGACTGAAGTCACAG+CGG 0.775304 8.4:+46262993 MS.gene34272:CDS
TGTGTTTACCTATGACAACG+GGG 0.785259 8.4:-46260081 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAATAAATAACAAAAAAA+AGG - chr8.4:46263999-46264018 None:intergenic 10.0%
!! TGTGAAATATTAATAAATTA+TGG - chr8.4:46260267-46260286 None:intergenic 10.0%
!! TTAATAAAAATAAAAACCAA+GGG + chr8.4:46264046-46264065 MS.gene34272:intron 10.0%
!! TTTAATAAAAATAAAAACCA+AGG + chr8.4:46264045-46264064 MS.gene34272:intron 10.0%
!!! AATAAGTTAATTTTTTAAGA+CGG + chr8.4:46261815-46261834 MS.gene34272:intron 10.0%
!!! AATTTTTTTTTTCTTTTACT+TGG + chr8.4:46259962-46259981 MS.gene34272:intron 10.0%
!!! TTTTTTATTAAGTTATAGTA+CGG + chr8.4:46261759-46261778 MS.gene34272:intron 10.0%
!! AAAGAAACTAAATAATTGTT+TGG + chr8.4:46261617-46261636 MS.gene34272:intron 15.0%
!! ACAAATTATGAAAATTATCA+AGG + chr8.4:46260196-46260215 MS.gene34272:intron 15.0%
!! CAAATAAATTATTTCATTTG+TGG + chr8.4:46263197-46263216 MS.gene34272:CDS 15.0%
!! TAGAATATATTACTATTAGA+AGG - chr8.4:46262731-46262750 None:intergenic 15.0%
!! TCTTAATTATATTATTGAAG+TGG - chr8.4:46262412-46262431 None:intergenic 15.0%
!! TTGATAAAAAAATGTATTAC+AGG - chr8.4:46261695-46261714 None:intergenic 15.0%
!!! AAGATATTAGGTTTTTATAT+TGG + chr8.4:46260369-46260388 MS.gene34272:intron 15.0%
!!! AATAATGTAATTGCTTTTAA+AGG + chr8.4:46261569-46261588 MS.gene34272:intron 15.0%
!!! AGATATTAGGTTTTTATATT+GGG + chr8.4:46260370-46260389 MS.gene34272:intron 15.0%
!!! ATCATATTAGGTTTTTATAT+TGG + chr8.4:46260495-46260514 MS.gene34272:intron 15.0%
!!! TAAAAGTAACAATGTTTTTT+AGG + chr8.4:46261254-46261273 MS.gene34272:intron 15.0%
!!! TAATAGTTAGGTTTTTATAT+TGG + chr8.4:46260831-46260850 MS.gene34272:intron 15.0%
!!! TCAAAATACTATTTTCAAAA+TGG - chr8.4:46263937-46263956 None:intergenic 15.0%
!!! TTTCTTTTTATTGTGTTTAA+GGG - chr8.4:46261604-46261623 None:intergenic 15.0%
!! AAAAAAAAGTGAAATATGCA+TGG - chr8.4:46262452-46262471 None:intergenic 20.0%
!! AACGTAAATTTATAACTGAA+TGG - chr8.4:46261949-46261968 None:intergenic 20.0%
!! ATCTCTCTTTATAAGATATT+AGG + chr8.4:46260357-46260376 MS.gene34272:intron 20.0%
!! ATTGAGAAGGAAAAATTATT+TGG + chr8.4:46260223-46260242 MS.gene34272:intron 20.0%
!! ATTTCTCATTTGTTTGTAAT+TGG - chr8.4:46262519-46262538 None:intergenic 20.0%
!! CAAGATCATAACAAATTATT+CGG + chr8.4:46262654-46262673 MS.gene34272:intron 20.0%
!! GAAATTTCTATTAATGAAAG+TGG + chr8.4:46264075-46264094 MS.gene34272:intron 20.0%
!! GATAGATATGTTATTAACAA+AGG - chr8.4:46260340-46260359 None:intergenic 20.0%
!! TAAATAACAAAAAAAAGGGT+CGG - chr8.4:46263994-46264013 None:intergenic 20.0%
!! TAAATTATTTCATTTGTGGA+CGG + chr8.4:46263201-46263220 MS.gene34272:CDS 20.0%
!! TAATTTATTTGTTCCAACAA+TGG - chr8.4:46263188-46263207 None:intergenic 20.0%
!! TGTTACCCTTATTAATATAA+GGG + chr8.4:46261389-46261408 MS.gene34272:intron 20.0%
!! TTAAAAATAAAGTAGCAATG+AGG - chr8.4:46264030-46264049 None:intergenic 20.0%
!! TTAGTAGTATATGTTACAAT+CGG - chr8.4:46261237-46261256 None:intergenic 20.0%
!!! AAAATCAAGGTTTTAAATAG+TGG - chr8.4:46259873-46259892 None:intergenic 20.0%
!!! AGCATATTAGGTTTTTATAT+TGG + chr8.4:46261003-46261022 MS.gene34272:intron 20.0%
!!! ATTAAAAAGGCATTTATCTT+AGG + chr8.4:46263905-46263924 MS.gene34272:intron 20.0%
!!! ATTGTTAGACAGAAATTTTT+AGG + chr8.4:46262841-46262860 MS.gene34272:intron 20.0%
!!! ATTTTTGGACTTATAGAAAT+AGG + chr8.4:46263736-46263755 MS.gene34272:intron 20.0%
!!! CTATTTAAAACCTTGATTTT+AGG + chr8.4:46259873-46259892 MS.gene34272:intron 20.0%
!!! CTGAAAATTTTTTAGTTGAA+GGG - chr8.4:46260037-46260056 None:intergenic 20.0%
!!! GTTTCTTTTTATTGTGTTTA+AGG - chr8.4:46261605-46261624 None:intergenic 20.0%
!!! TAGTTTTATTGTATGTTACT+TGG + chr8.4:46261201-46261220 MS.gene34272:intron 20.0%
!!! TGAAAATTTTTTAGTTGAAG+GGG - chr8.4:46260036-46260055 None:intergenic 20.0%
!!! TGAATATTTTTCAGACATAA+GGG - chr8.4:46262363-46262382 None:intergenic 20.0%
!!! TTAACAAAGGATATGTTTTT+TGG - chr8.4:46260327-46260346 None:intergenic 20.0%
!!! TTCAATATTTTCTCGTTTAT+TGG + chr8.4:46263566-46263585 MS.gene34272:intron 20.0%
!!! TTCTGCAAAAGTATATTATA+GGG + chr8.4:46262473-46262492 MS.gene34272:intron 20.0%
!!! TTGAATATTTTTCAGACATA+AGG - chr8.4:46262364-46262383 None:intergenic 20.0%
!!! TTTCTGCAAAAGTATATTAT+AGG + chr8.4:46262472-46262491 MS.gene34272:intron 20.0%
!!! TTTTTTGGTTACATTAACAA+AGG - chr8.4:46260312-46260331 None:intergenic 20.0%
! AAAAATAAAAACCAAGGGAA+AGG + chr8.4:46264051-46264070 MS.gene34272:intron 25.0%
! AAATAACAAAAAAAAGGGTC+GGG - chr8.4:46263993-46264012 None:intergenic 25.0%
! ACAACAAAATGATCCAAAAA+TGG - chr8.4:46259579-46259598 None:intergenic 25.0%
! ACAGATAAAAGCGATAAAAA+AGG + chr8.4:46263390-46263409 MS.gene34272:CDS 25.0%
! ACCTTATCTTTAATCTATGT+GGG + chr8.4:46261093-46261112 MS.gene34272:intron 25.0%
! ACTTGGTTATTCCAATAATA+TGG + chr8.4:46261116-46261135 MS.gene34272:intron 25.0%
! AGTAGATTTGATGTAATGTT+TGG + chr8.4:46261512-46261531 MS.gene34272:intron 25.0%
! ATTAGTAGCTAAAATATGCA+AGG - chr8.4:46264163-46264182 None:intergenic 25.0%
! CCTAAATCATTTCAACAATA+AGG - chr8.4:46259759-46259778 None:intergenic 25.0%
! CCTTATTGTTGAAATGATTT+AGG + chr8.4:46259756-46259775 MS.gene34272:intron 25.0%
! CTCTTGTGTAAAAAAAAACA+AGG - chr8.4:46262267-46262286 None:intergenic 25.0%
! CTGTTACCCTTATTAATATA+AGG + chr8.4:46261388-46261407 MS.gene34272:intron 25.0%
! GTGTAAAAAAAAACAAGGTA+AGG - chr8.4:46262262-46262281 None:intergenic 25.0%
! TAATAAGGGTAACAGAAATT+GGG - chr8.4:46261383-46261402 None:intergenic 25.0%
! TGATGTGAACACAAAAATAA+AGG - chr8.4:46259724-46259743 None:intergenic 25.0%
! TGCAATTATAGTTTAGTGAA+AGG + chr8.4:46263677-46263696 MS.gene34272:intron 25.0%
! TTAATAAGGGTAACAGAAAT+TGG - chr8.4:46261384-46261403 None:intergenic 25.0%
! TTATCAAGGATTAATTGAGA+AGG + chr8.4:46260210-46260229 MS.gene34272:intron 25.0%
! TTTGAAAACACTTGCATTAT+TGG + chr8.4:46263824-46263843 MS.gene34272:intron 25.0%
!! AACATAAACATGATTTTGCA+GGG - chr8.4:46260164-46260183 None:intergenic 25.0%
!! ATTTCACTGTGTTTTCAATA+AGG + chr8.4:46262567-46262586 MS.gene34272:intron 25.0%
!! CCTTCAACTAAAAAATTTTC+AGG + chr8.4:46260035-46260054 MS.gene34272:intron 25.0%
!! TAACATAAACATGATTTTGC+AGG - chr8.4:46260165-46260184 None:intergenic 25.0%
!! TTTGTATTTTCTTGATGCAA+TGG + chr8.4:46261969-46261988 MS.gene34272:intron 25.0%
!!! CATATTTTAGCTACTAATGA+TGG + chr8.4:46264165-46264184 MS.gene34272:intron 25.0%
!!! CCTGAAAATTTTTTAGTTGA+AGG - chr8.4:46260038-46260057 None:intergenic 25.0%
!!! CGAGTTTATTTTACCATTTT+TGG + chr8.4:46259563-46259582 MS.gene34272:intron 25.0%
!!! CTTGTTTTTTTTTACACAAG+AGG + chr8.4:46262265-46262284 MS.gene34272:intron 25.0%
!!! GATTGAAATTAGTTTCTAGT+TGG - chr8.4:46262695-46262714 None:intergenic 25.0%
!!! TGATTTCCTTTTAGCTTTTT+TGG + chr8.4:46264112-46264131 MS.gene34272:intron 25.0%
!!! TGCTGTTTTTTTTTCTCTAA+GGG + chr8.4:46261305-46261324 MS.gene34272:intron 25.0%
!!! TTGCTGTTTTTTTTTCTCTA+AGG + chr8.4:46261304-46261323 MS.gene34272:intron 25.0%
AAATCCAATTTACTGTGAGT+TGG - chr8.4:46264277-46264296 None:intergenic 30.0%
AAGAGAGAGTTAAAATCTGT+GGG - chr8.4:46262076-46262095 None:intergenic 30.0%
AATTAGCATCTGACTAATGA+GGG - chr8.4:46259934-46259953 None:intergenic 30.0%
AATTAGGATGAGAACATTAG+AGG + chr8.4:46259642-46259661 MS.gene34272:CDS 30.0%
AGGATAGAAGCAGATTAAAA+AGG + chr8.4:46263892-46263911 MS.gene34272:intron 30.0%
ATTGTTGAAATGATTTAGGC+AGG + chr8.4:46259760-46259779 MS.gene34272:intron 30.0%
GACCTTATCTTTAATCTATG+TGG + chr8.4:46261092-46261111 MS.gene34272:intron 30.0%
GATAGGCATGAAATCATATT+AGG + chr8.4:46260483-46260502 MS.gene34272:intron 30.0%
GCTAGCAAAAACATGATATA+CGG + chr8.4:46260782-46260801 MS.gene34272:intron 30.0%
GCTAGCAAAAACATGATATT+CGG + chr8.4:46260950-46260969 MS.gene34272:intron 30.0%
GTAGGAACATTCCATATTAT+TGG - chr8.4:46261130-46261149 None:intergenic 30.0%
GTTAATCTCTTGACAGAAAA+TGG - chr8.4:46263779-46263798 None:intergenic 30.0%
GTTACTCAAGAATTCAAACT+TGG + chr8.4:46263520-46263539 MS.gene34272:CDS 30.0%
TAACAATAGAATGTAGCCAA+TGG + chr8.4:46262886-46262905 MS.gene34272:intron 30.0%
TAATCATGATAGCCTGTATT+TGG + chr8.4:46263865-46263884 MS.gene34272:intron 30.0%
TATACCTAATTGAAACCAAC+AGG - chr8.4:46262801-46262820 None:intergenic 30.0%
TATAGTTTAGTGAAAGGCAA+AGG + chr8.4:46263683-46263702 MS.gene34272:intron 30.0%
TCCCACATAGATTAAAGATA+AGG - chr8.4:46261097-46261116 None:intergenic 30.0%
TCTATCCTTAATCCAAATAC+AGG - chr8.4:46263880-46263899 None:intergenic 30.0%
TGACCAAAGTTTATAAAGAG+AGG - chr8.4:46261072-46261091 None:intergenic 30.0%
TTGTTGAAATGATTTAGGCA+GGG + chr8.4:46259761-46259780 MS.gene34272:intron 30.0%
! AAAAGTATAGAATGACCTCA+AGG - chr8.4:46261358-46261377 None:intergenic 30.0%
! AGTATATTATAGGGAGTACA+AGG + chr8.4:46262482-46262501 MS.gene34272:intron 30.0%
! ATTTACATGATTCTGAAGAC+AGG - chr8.4:46264200-46264219 None:intergenic 30.0%
! GTAAGAGTCTTTGTTTAGAT+TGG + chr8.4:46259692-46259711 MS.gene34272:intron 30.0%
! GTATATTATAGGGAGTACAA+GGG + chr8.4:46262483-46262502 MS.gene34272:intron 30.0%
! TATTTTCTTGATGCAATGGA+GGG + chr8.4:46261973-46261992 MS.gene34272:intron 30.0%
! TCTCTAAGGGATATATTCAT+GGG + chr8.4:46261318-46261337 MS.gene34272:intron 30.0%
! TTATTGTATGTTACTTGGCT+TGG + chr8.4:46261206-46261225 MS.gene34272:intron 30.0%
! TTCTCTAAGGGATATATTCA+TGG + chr8.4:46261317-46261336 MS.gene34272:intron 30.0%
! TTTACTGTGAGTTGGAAAAT+TGG - chr8.4:46264269-46264288 None:intergenic 30.0%
! TTTTCCAACTCACAGTAAAT+TGG + chr8.4:46264270-46264289 MS.gene34272:CDS 30.0%
!! ACTTGGCTCTAAATTAACTA+AGG + chr8.4:46263537-46263556 MS.gene34272:CDS 30.0%
!! ATAGGCACTGATATCATATT+AGG + chr8.4:46260651-46260670 MS.gene34272:intron 30.0%
!! GAAATTTTGAAGAGAGAAGT+AGG + chr8.4:46261449-46261468 MS.gene34272:intron 30.0%
!! GATTAGTGTAAGTATTGAGA+TGG + chr8.4:46263628-46263647 MS.gene34272:intron 30.0%
!!! AATTTTTTAAGACGGAAGTG+TGG + chr8.4:46261823-46261842 MS.gene34272:intron 30.0%
!!! GAGATACTATTTTGGTTATG+TGG + chr8.4:46259901-46259920 MS.gene34272:intron 30.0%
!!! GTTGGTTAGTTTCTCATTTT+TGG + chr8.4:46263721-46263740 MS.gene34272:intron 30.0%
!!! TTTCCTTTTAGCTTTTTTGG+TGG + chr8.4:46264115-46264134 MS.gene34272:intron 30.0%
!!! TTTTATTTTGGCCATCTCTT+TGG - chr8.4:46263356-46263375 None:intergenic 30.0%
AATGACCAGAAGTGAATCAT+GGG - chr8.4:46259998-46260017 None:intergenic 35.0%
AGAGAGAGTTAAAATCTGTG+GGG - chr8.4:46262075-46262094 None:intergenic 35.0%
AGAGATGGCCAAAATAAAAG+CGG + chr8.4:46263357-46263376 MS.gene34272:CDS 35.0%
AGGCAGCCCTTATATTAATA+AGG - chr8.4:46261398-46261417 None:intergenic 35.0%
ATAGCCAAATCAGCAAAGAA+AGG + chr8.4:46263229-46263248 MS.gene34272:CDS 35.0%
ATATGATTTCATGCCTATCC+AGG - chr8.4:46260482-46260501 None:intergenic 35.0%
ATCTCAGAGTCCTAAAATCA+AGG - chr8.4:46259886-46259905 None:intergenic 35.0%
ATTGGAGAATGAATTGCCAT+TGG - chr8.4:46262905-46262924 None:intergenic 35.0%
CAAAATAAAAGCGGAGAAAG+AGG + chr8.4:46263366-46263385 MS.gene34272:CDS 35.0%
CAATTAGCATCTGACTAATG+AGG - chr8.4:46259935-46259954 None:intergenic 35.0%
CTCATTAGTCAGATGCTAAT+TGG + chr8.4:46259933-46259952 MS.gene34272:intron 35.0%
CTTGTGTTTACCTATGACAA+CGG - chr8.4:46260086-46260105 None:intergenic 35.0%
GAAGAGAGAGTTAAAATCTG+TGG - chr8.4:46262077-46262096 None:intergenic 35.0%
GAATTCTTGAGTAACATCCT+CGG - chr8.4:46263515-46263534 None:intergenic 35.0%
GAGAAGACTCAAAAATCAGT+GGG + chr8.4:46262049-46262068 MS.gene34272:intron 35.0%
GAGTTTGAGAAGAGAGAAAA+AGG + chr8.4:46261479-46261498 MS.gene34272:intron 35.0%
GATAGCAAAAACCTGATAGT+CGG + chr8.4:46260443-46260462 MS.gene34272:intron 35.0%
GATAGCAAAAACCTGATAGT+TGG + chr8.4:46260443-46260462 MS.gene34272:intron 35.0%
GATAGCCTGTATTTGGATTA+AGG + chr8.4:46263872-46263891 MS.gene34272:intron 35.0%
GCTTATTTGTCTAAACCTTG+AGG + chr8.4:46261340-46261359 MS.gene34272:intron 35.0%
GGCAGCCCTTATATTAATAA+GGG - chr8.4:46261397-46261416 None:intergenic 35.0%
GTGCCTCTCTTTATAAACTT+TGG + chr8.4:46261066-46261085 MS.gene34272:intron 35.0%
GTTCCTACTGTACATAATTC+TGG + chr8.4:46261142-46261161 MS.gene34272:intron 35.0%
TAAGCTTACAATCTGTCTTG+AGG - chr8.4:46260139-46260158 None:intergenic 35.0%
TAAGTTATAGTACGGAAGTG+TGG + chr8.4:46261767-46261786 MS.gene34272:intron 35.0%
TAGAAATTTCACCTTTCCCT+TGG - chr8.4:46264065-46264084 None:intergenic 35.0%
TCTTTAATCTATGTGGGACT+TGG + chr8.4:46261099-46261118 MS.gene34272:intron 35.0%
TGAGAAGACTCAAAAATCAG+TGG + chr8.4:46262048-46262067 MS.gene34272:intron 35.0%
TGGAGAAGAAGAACTTGATT+GGG + chr8.4:46263258-46263277 MS.gene34272:CDS 35.0%
TTATTAATATAAGGGCTGCC+TGG + chr8.4:46261397-46261416 MS.gene34272:intron 35.0%
TTGTGTTTACCTATGACAAC+GGG - chr8.4:46260085-46260104 None:intergenic 35.0%
! AGAATAGGACTAGCAAACAA+AGG + chr8.4:46259490-46259509 MS.gene34272:CDS 35.0%
! ATACGCACTGATAGCATATT+AGG + chr8.4:46260991-46261010 MS.gene34272:intron 35.0%
! GTATTTTCTTGATGCAATGG+AGG + chr8.4:46261972-46261991 MS.gene34272:intron 35.0%
! TCTTCCTCTGCATTTTTGTA+TGG - chr8.4:46263484-46263503 None:intergenic 35.0%
!! AGGAAAAGTACCTTGGAATA+AGG + chr8.4:46259510-46259529 MS.gene34272:CDS 35.0%
!! CAAACAAAGGAAAAGTACCT+TGG + chr8.4:46259503-46259522 MS.gene34272:CDS 35.0%
!! CTATGTTTTGTTCCCATAAG+AGG - chr8.4:46263036-46263055 None:intergenic 35.0%
!! CTCTTTCTCCGCTTTTATTT+TGG - chr8.4:46263368-46263387 None:intergenic 35.0%
!! GGAAAAGTACCTTGGAATAA+GGG + chr8.4:46259511-46259530 MS.gene34272:CDS 35.0%
!! TGGTCAAGTTGAGTTAGATT+GGG + chr8.4:46263081-46263100 MS.gene34272:CDS 35.0%
!! TTACACAAGAGGTTGTTTCT+AGG + chr8.4:46262276-46262295 MS.gene34272:intron 35.0%
!! TTCTTTTACTTGGTAGTTCC+TGG + chr8.4:46259972-46259991 MS.gene34272:intron 35.0%
!! TTTTTGCTATCTAACCACTC+CGG - chr8.4:46260601-46260620 None:intergenic 35.0%
!!! AGGACTCTGAGATACTATTT+TGG + chr8.4:46259893-46259912 MS.gene34272:intron 35.0%
!!! AGGGTTTTAAATAGAGGTTG+CGG + chr8.4:46259780-46259799 MS.gene34272:intron 35.0%
!!! CTGATTTTTGAGTCTTCTCA+TGG - chr8.4:46262048-46262067 None:intergenic 35.0%
!!! TTAGGCAGGGTTTTAAATAG+AGG + chr8.4:46259774-46259793 MS.gene34272:intron 35.0%
!!! TTTTAGGTTGTCTTGCTCTT+TGG + chr8.4:46262857-46262876 MS.gene34272:intron 35.0%
!!! TTTTCAGGTGAAGAAGAAGA+TGG + chr8.4:46260050-46260069 MS.gene34272:intron 35.0%
AACACAGTGAAATGATCGAG+AGG - chr8.4:46262560-46262579 None:intergenic 40.0%
AAGTACCTTGGAATAAGGGA+AGG + chr8.4:46259515-46259534 MS.gene34272:CDS 40.0%
AATGAAAGTGGCACAAACGA+CGG + chr8.4:46264087-46264106 MS.gene34272:intron 40.0%
ACAGGCTGCTAAAGTCATAA+AGG + chr8.4:46264351-46264370 MS.gene34272:CDS 40.0%
ACGCTCCAAATGTTCAATTC+TGG - chr8.4:46260744-46260763 None:intergenic 40.0%
ACTCTTACTTGACTTCACCT+TGG - chr8.4:46259680-46259699 None:intergenic 40.0%
AGAAGTGAAGTAGCTAGAGA+AGG + chr8.4:46264229-46264248 MS.gene34272:CDS 40.0%
AGACATAAGGGTAACAACCT+TGG - chr8.4:46262351-46262370 None:intergenic 40.0%
AGGAGAATACTGAGCAAAGT+TGG + chr8.4:46263703-46263722 MS.gene34272:intron 40.0%
AGGCTGCTAAAGTCATAAAG+GGG + chr8.4:46264353-46264372 MS.gene34272:CDS 40.0%
AGTCCTACACTTCTCTTGTT+TGG - chr8.4:46262117-46262136 None:intergenic 40.0%
ATAGCAAATGCAGCCAAGAA+AGG + chr8.4:46263052-46263071 MS.gene34272:CDS 40.0%
CAGGCTGCTAAAGTCATAAA+GGG + chr8.4:46264352-46264371 MS.gene34272:CDS 40.0%
CCAAATCAGCAAAGAAAGGA+GGG + chr8.4:46263233-46263252 MS.gene34272:CDS 40.0%
CCACCACCAAAAAAGCTAAA+AGG - chr8.4:46264121-46264140 None:intergenic 40.0%
CCACCAGAATTATGTACAGT+AGG - chr8.4:46261148-46261167 None:intergenic 40.0%
CCTACTGTACATAATTCTGG+TGG + chr8.4:46261145-46261164 MS.gene34272:intron 40.0%
CGCTCCAAATGTTCAATTCT+GGG - chr8.4:46260743-46260762 None:intergenic 40.0%
CTAACTATTAGTGCGTATCC+AGG - chr8.4:46260821-46260840 None:intergenic 40.0%
CTCTTACTTGACTTCACCTT+GGG - chr8.4:46259679-46259698 None:intergenic 40.0%
CTGGATACGCACTAATAGTT+AGG + chr8.4:46260819-46260838 MS.gene34272:intron 40.0%
CTGTCAAGAGATTAACTGCT+TGG + chr8.4:46263783-46263802 MS.gene34272:intron 40.0%
CTTTACACTGTGTTTGGTAG+AGG - chr8.4:46262184-46262203 None:intergenic 40.0%
GAAAAGCTGATGACCATTGT+TGG + chr8.4:46263172-46263191 MS.gene34272:CDS 40.0%
GAAGTTGAAGAGAGAGAAGT+AGG - chr8.4:46262145-46262164 None:intergenic 40.0%
GAATGACCAGAAGTGAATCA+TGG - chr8.4:46259999-46260018 None:intergenic 40.0%
GTGGAGAAGAAGAACTTGAT+TGG + chr8.4:46263257-46263276 MS.gene34272:CDS 40.0%
GTGTTTGGTAGAGGAGAAAA+AGG - chr8.4:46262175-46262194 None:intergenic 40.0%
GTTAAATGTGGCCTCAATTG+CGG + chr8.4:46259812-46259831 MS.gene34272:intron 40.0%
TATGATATCAGTGCCTATCC+AGG - chr8.4:46260649-46260668 None:intergenic 40.0%
TCTCATGGATGAGAAGAAAC+AGG - chr8.4:46262033-46262052 None:intergenic 40.0%
TCTTACTTGACTTCACCTTG+GGG - chr8.4:46259678-46259697 None:intergenic 40.0%
TGTGTTTACCTATGACAACG+GGG - chr8.4:46260084-46260103 None:intergenic 40.0%
TGTTTCCTTCCCTTATTCCA+AGG - chr8.4:46259523-46259542 None:intergenic 40.0%
TTCTCATCCTAATTCGCTCA+CGG - chr8.4:46259636-46259655 None:intergenic 40.0%
! ACACTTCTCTTGTTTGGTTG+TGG - chr8.4:46262111-46262130 None:intergenic 40.0%
! CAACCAAACAAGAGAAGTGT+AGG + chr8.4:46262111-46262130 MS.gene34272:intron 40.0%
! GAGAACATTAGAGGCTTTGA+AGG + chr8.4:46259651-46259670 MS.gene34272:CDS 40.0%
! GATGCAATGGAGGGTATAAT+TGG + chr8.4:46261982-46262001 MS.gene34272:intron 40.0%
! GGAGCAGTTTTTCCTCTTAT+GGG + chr8.4:46263021-46263040 MS.gene34272:CDS 40.0%
!! CAGGAAGGTTGGTAAAAGAT+TGG - chr8.4:46262923-46262942 None:intergenic 40.0%
!! GTGGTCAAGTTGAGTTAGAT+TGG + chr8.4:46263080-46263099 MS.gene34272:CDS 40.0%
!! TCGTCCTGTTGGTTTCAATT+AGG + chr8.4:46262794-46262813 MS.gene34272:intron 40.0%
!! TTATTCTCTGAGACGTGTCT+GGG + chr8.4:46262970-46262989 MS.gene34272:CDS 40.0%
!!! CCTTTTAGCTTTTTTGGTGG+TGG + chr8.4:46264118-46264137 MS.gene34272:intron 40.0%
AATGTTCAATTCTGGGCGTG+AGG - chr8.4:46260736-46260755 None:intergenic 45.0%
AATTCTGCAGGCAGAGGAAA+AGG + chr8.4:46263144-46263163 MS.gene34272:CDS 45.0%
ACAACTTTACCGTTGCACCA+AGG + chr8.4:46262331-46262350 MS.gene34272:intron 45.0%
ACAGTGAAATGATCGAGAGG+TGG - chr8.4:46262557-46262576 None:intergenic 45.0%
ACGCTCCAAATGTTCAATCC+TGG - chr8.4:46260409-46260428 None:intergenic 45.0%
AGAGAAAAGATCTCCGAGAG+AGG + chr8.4:46263428-46263447 MS.gene34272:CDS 45.0%
ATGATATACGGTGACCCAAC+GGG + chr8.4:46260794-46260813 MS.gene34272:intron 45.0%
CAAATGCAGCCAAGAAAGGA+GGG + chr8.4:46263056-46263075 MS.gene34272:CDS 45.0%
CAACCAACTTGTAAGGTCAG+CGG + chr8.4:46261044-46261063 MS.gene34272:intron 45.0%
CAACCAACTTGTAGTGTGAC+CGG + chr8.4:46260536-46260555 MS.gene34272:intron 45.0%
CACGCCCAGAATTGAACATT+TGG + chr8.4:46260736-46260755 MS.gene34272:intron 45.0%
CATGATATACGGTGACCCAA+CGG + chr8.4:46260793-46260812 MS.gene34272:intron 45.0%
CCTTACGCAACCAACTTGTA+AGG + chr8.4:46261037-46261056 MS.gene34272:intron 45.0%
CGCTCCAAATGTTCAATCCT+GGG - chr8.4:46260408-46260427 None:intergenic 45.0%
CGGAGAATCGCAGTTAAATG+TGG + chr8.4:46259800-46259819 MS.gene34272:intron 45.0%
CTAGTATTGTAGTTGCAGCG+AGG + chr8.4:46262765-46262784 MS.gene34272:intron 45.0%
GCCAAATCAGCAAAGAAAGG+AGG + chr8.4:46263232-46263251 MS.gene34272:CDS 45.0%
GCGTATTACAGAGAAGGCAA+AGG + chr8.4:46263330-46263349 MS.gene34272:CDS 45.0%
GCTTACAATCTGTCTTGAGG+AGG - chr8.4:46260136-46260155 None:intergenic 45.0%
GCTTCAGCGTATTACAGAGA+AGG + chr8.4:46263324-46263343 MS.gene34272:CDS 45.0%
GTCACGTGACTGAAAAGTCA+CGG - chr8.4:46262310-46262329 None:intergenic 45.0%
GTCACTTGCAGATCAGATAC+AGG + chr8.4:46264333-46264352 MS.gene34272:CDS 45.0%
TATGCTATCAGTGCGTATCC+AGG - chr8.4:46260989-46261008 None:intergenic 45.0%
TCACGTGACTGAAAAGTCAC+GGG - chr8.4:46262309-46262328 None:intergenic 45.0%
TCGTTGCGTAAGGTTGAGTT+AGG - chr8.4:46260690-46260709 None:intergenic 45.0%
TCTCATCCTAATTCGCTCAC+GGG - chr8.4:46259635-46259654 None:intergenic 45.0%
TGGTTGCGTAAGGTTGTGTT+AGG - chr8.4:46261030-46261049 None:intergenic 45.0%
TGTTCCCAAAACCGCAATTG+AGG - chr8.4:46259826-46259845 None:intergenic 45.0%
TTCCTGCAGTGATCAGATCA+AGG + chr8.4:46262937-46262956 MS.gene34272:intron 45.0%
TTCCTTGATCTGATCACTGC+AGG - chr8.4:46262942-46262961 None:intergenic 45.0%
TTGATCTGATCACTGCAGGA+AGG - chr8.4:46262938-46262957 None:intergenic 45.0%
TTTCCTCTGCCTGCAGAATT+CGG - chr8.4:46263144-46263163 None:intergenic 45.0%
! ATGATATTCGGTGACCCAAC+GGG + chr8.4:46260962-46260981 MS.gene34272:intron 45.0%
! CATGATATTCGGTGACCCAA+CGG + chr8.4:46260961-46260980 MS.gene34272:intron 45.0%
! CCCTCCTTTCTTTGCTGATT+TGG - chr8.4:46263236-46263255 None:intergenic 45.0%
! GGGAGCAGTTTTTCCTCTTA+TGG + chr8.4:46263020-46263039 MS.gene34272:CDS 45.0%
! TAATTCTGGTGGAAGAGCAC+AGG + chr8.4:46261156-46261175 MS.gene34272:intron 45.0%
! TTGAACATTTGGAGCGTGAC+CGG + chr8.4:46260412-46260431 MS.gene34272:intron 45.0%
!! CACTACAAGTTGGTTGCGTA+CGG - chr8.4:46260532-46260551 None:intergenic 45.0%
!! CCTTACAAGTTGGTTGCGTA+AGG - chr8.4:46261040-46261059 None:intergenic 45.0%
!! GTTATTCTCTGAGACGTGTC+TGG + chr8.4:46262969-46262988 MS.gene34272:CDS 45.0%
!!! CTCTAGCTTTTGTCCTCTCT+CGG - chr8.4:46263444-46263463 None:intergenic 45.0%
!! ATAATAAATAACAAAAAAAA+GGG - chr8.4:46263998-46264017 None:intergenic 5.0%
!!! AAATTATTTTTTTCATAAAA+GGG - chr8.4:46261666-46261685 None:intergenic 5.0%
!!! ACATAATATTTTTTTTTTTA+AGG - chr8.4:46260110-46260129 None:intergenic 5.0%
!!! TAAATTATTTTTTTCATAAA+AGG - chr8.4:46261667-46261686 None:intergenic 5.0%
AAACACACCCTTAGTGCACC+AGG - chr8.4:46261418-46261437 None:intergenic 50.0%
AAGAGCGACTGAAGTCACAG+CGG + chr8.4:46262993-46263012 MS.gene34272:CDS 50.0%
AAGGGAAGGAAACACACTGC+AGG + chr8.4:46259529-46259548 MS.gene34272:CDS 50.0%
AAGGTCCAGAGTTCAAACCC+TGG - chr8.4:46264144-46264163 None:intergenic 50.0%
AATGTTCAATCCTGGGCGTG+AGG - chr8.4:46260401-46260420 None:intergenic 50.0%
AGAGGAAGACAAATGTGCCG+AGG + chr8.4:46263495-46263514 MS.gene34272:CDS 50.0%
AGTCCGGTCACACTACAAGT+TGG - chr8.4:46260542-46260561 None:intergenic 50.0%
ATGTTCAATCCTGGGCGTGA+GGG - chr8.4:46260400-46260419 None:intergenic 50.0%
CAACGAACATGAAGCGTGAC+CGG + chr8.4:46260704-46260723 MS.gene34272:intron 50.0%
CAACGAACATGAAGCGTGAC+TGG + chr8.4:46260704-46260723 MS.gene34272:intron 50.0%
CAATTGATGAGACCCCTTCC+CGG - chr8.4:46262224-46262243 None:intergenic 50.0%
CACGCCCAGGATTGAACATT+TGG + chr8.4:46260401-46260420 MS.gene34272:intron 50.0%
CGCTTCATGTTCGTTGCGTA+AGG - chr8.4:46260700-46260719 None:intergenic 50.0%
CTGAACATCCCCGTTGTCAT+AGG + chr8.4:46260073-46260092 MS.gene34272:CDS 50.0%
GAAGGCAAAGGCCAAAGAGA+TGG + chr8.4:46263342-46263361 MS.gene34272:CDS 50.0%
GCAAATGCAGCCAAGAAAGG+AGG + chr8.4:46263055-46263074 MS.gene34272:CDS 50.0%
GCGGGACTTTACACTGTGTT+TGG - chr8.4:46262190-46262209 None:intergenic 50.0%
TCAGCAAAGAAAGGAGGGAG+TGG + chr8.4:46263238-46263257 MS.gene34272:CDS 50.0%
TCTGATCACTGCAGGAAGGT+TGG - chr8.4:46262934-46262953 None:intergenic 50.0%
TGAGTTCCACCGAATTCTGC+AGG + chr8.4:46263132-46263151 MS.gene34272:CDS 50.0%
TGGTTGCGTACGGTTGAGTT+AGG - chr8.4:46260522-46260541 None:intergenic 50.0%
TGGTTGTGCACTTGTGCTGT+AGG - chr8.4:46261929-46261948 None:intergenic 50.0%
TGTAAAGTCCCGCATACGCA+AGG + chr8.4:46262197-46262216 MS.gene34272:intron 50.0%
TTGACCACTCCCTCCTTTCT+TGG - chr8.4:46263068-46263087 None:intergenic 50.0%
! CATTTGGAGCGTGACAAGAG+TGG + chr8.4:46260417-46260436 MS.gene34272:intron 50.0%
! GGGTAACAACCTTGGTGCAA+CGG - chr8.4:46262343-46262362 None:intergenic 50.0%
! GTGGCCTCAATTGCGGTTTT+GGG + chr8.4:46259819-46259838 MS.gene34272:intron 50.0%
! TGGTGCACTAAGGGTGTGTT+TGG + chr8.4:46261417-46261436 MS.gene34272:intron 50.0%
! TGTGGCCTCAATTGCGGTTT+TGG + chr8.4:46259818-46259837 MS.gene34272:intron 50.0%
!! CCTGATAGTTGGTGACCCAA+CGG + chr8.4:46260454-46260473 MS.gene34272:intron 50.0%
!! CGAGGTATTGTTCGTCCTGT+TGG + chr8.4:46262783-46262802 MS.gene34272:intron 50.0%
!! CTGATAGTTGGTGACCCAAC+GGG + chr8.4:46260455-46260474 MS.gene34272:intron 50.0%
!!! AGCTTTTTTGGTGGTGGCCA+GGG + chr8.4:46264124-46264143 MS.gene34272:intron 50.0%
!!! TAGCTTTTTTGGTGGTGGCC+AGG + chr8.4:46264123-46264142 MS.gene34272:intron 50.0%
AGAGCGACTGAAGTCACAGC+GGG + chr8.4:46262994-46263013 MS.gene34272:CDS 55.0%
ATGCCTATCCAGGACCCGTT+GGG - chr8.4:46260472-46260491 None:intergenic 55.0%
CAGAGACCCGTGAGCGAATT+AGG + chr8.4:46259626-46259645 MS.gene34272:intron 55.0%
CCAGAAGTGAATCATGGGCC+AGG - chr8.4:46259993-46260012 None:intergenic 55.0%
CCGTTGGGTCACCAACTATC+AGG - chr8.4:46260457-46260476 None:intergenic 55.0%
CCTGATAGTCGGTGACCCAA+CGG + chr8.4:46260621-46260640 MS.gene34272:intron 55.0%
CCTGGCCCATGATTCACTTC+TGG + chr8.4:46259990-46260009 MS.gene34272:intron 55.0%
CGGGAAGGGGTCTCATCAAT+TGG + chr8.4:46262222-46262241 MS.gene34272:intron 55.0%
CTGATAGTCGGTGACCCAAC+GGG + chr8.4:46260622-46260641 MS.gene34272:intron 55.0%
GCACCGCTGACCTTACAAGT+TGG - chr8.4:46261050-46261069 None:intergenic 55.0%
TGCTAGCTATCGAGCCACTC+CGG - chr8.4:46260769-46260788 None:intergenic 55.0%
!! AGAGGCTTTGAAGGACCCCA+AGG + chr8.4:46259660-46259679 MS.gene34272:CDS 55.0%
AAGGGCTGCCTGGTGCACTA+AGG + chr8.4:46261407-46261426 MS.gene34272:intron 60.0%
ACTGAAGTCACAGCGGGCAG+GGG + chr8.4:46263000-46263019 MS.gene34272:CDS 60.0%
AGGGCTGCCTGGTGCACTAA+GGG + chr8.4:46261408-46261427 MS.gene34272:intron 60.0%
AGTCCCGCATACGCAAGGTC+CGG + chr8.4:46262202-46262221 MS.gene34272:intron 60.0%
AGTGCCTATCCAGGACCCGT+TGG - chr8.4:46260640-46260659 None:intergenic 60.0%
AGTGCGTATCCAGGACCCGT+TGG - chr8.4:46260812-46260831 None:intergenic 60.0%
CATACGCAAGGTCCGGGAAG+GGG + chr8.4:46262209-46262228 MS.gene34272:intron 60.0%
CATGCCTATCCAGGACCCGT+TGG - chr8.4:46260473-46260492 None:intergenic 60.0%
CCACCGAATTCTGCAGGCAG+AGG + chr8.4:46263138-46263157 MS.gene34272:CDS 60.0%
CCTCTGCCTGCAGAATTCGG+TGG - chr8.4:46263141-46263160 None:intergenic 60.0%
CGCTCACGGGTCTCTGCAAT+TGG - chr8.4:46259622-46259641 None:intergenic 60.0%
CTTCCCGGACCTTGCGTATG+CGG - chr8.4:46262209-46262228 None:intergenic 60.0%
GACTGAAGTCACAGCGGGCA+GGG + chr8.4:46262999-46263018 MS.gene34272:CDS 60.0%
GCAGCCAAGAAAGGAGGGAG+TGG + chr8.4:46263061-46263080 MS.gene34272:CDS 60.0%
GCATACGCAAGGTCCGGGAA+GGG + chr8.4:46262208-46262227 MS.gene34272:intron 60.0%
GGTGGCCAGGGTTTGAACTC+TGG + chr8.4:46264136-46264155 MS.gene34272:intron 60.0%
GTGCCTATCCAGGACCCGTT+GGG - chr8.4:46260639-46260658 None:intergenic 60.0%
GTGCGTATCCAGGACCCGTT+GGG - chr8.4:46260811-46260830 None:intergenic 60.0%
TCAATCCTGGGCGTGAGGGT+AGG - chr8.4:46260396-46260415 None:intergenic 60.0%
TCTGGGCGTGAGGTTGAGTC+CGG - chr8.4:46260726-46260745 None:intergenic 60.0%
TGACCCAACGGGTCCTGGAT+AGG + chr8.4:46260466-46260485 MS.gene34272:intron 60.0%
TTCCCGGACCTTGCGTATGC+GGG - chr8.4:46262208-46262227 None:intergenic 60.0%
! CATTTGGAGCGTGACCGGAG+TGG + chr8.4:46260584-46260603 MS.gene34272:intron 60.0%
! CCGTTGGGTCACCGACTATC+AGG - chr8.4:46260624-46260643 None:intergenic 60.0%
CCTGGGCGTGAGGTTGAGTC+CGG - chr8.4:46260558-46260577 None:intergenic 65.0%
CGACTGAAGTCACAGCGGGC+AGG + chr8.4:46262998-46263017 MS.gene34272:CDS 65.0%
CGCATACGCAAGGTCCGGGA+AGG + chr8.4:46262207-46262226 MS.gene34272:intron 65.0%
GTCCCGCATACGCAAGGTCC+GGG + chr8.4:46262203-46262222 MS.gene34272:intron 65.0%
TACGGTGACCCAACGGGTCC+TGG + chr8.4:46260800-46260819 MS.gene34272:intron 65.0%
TTCGGTGACCCAACGGGTCC+TGG + chr8.4:46260968-46260987 MS.gene34272:intron 65.0%
!! GTTGGTGACCCAACGGGTCC+TGG + chr8.4:46260461-46260480 MS.gene34272:intron 65.0%
CCGGACTCAACCTCACGCCC+AGG + chr8.4:46260555-46260574 MS.gene34272:intron 70.0%
GTCGGTGACCCAACGGGTCC+TGG + chr8.4:46260628-46260647 MS.gene34272:intron 70.0%
TTGGGCCTACCCTCACGCCC+AGG + chr8.4:46260388-46260407 MS.gene34272:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 46259478 46264387 46259478 ID=MS.gene34272
chr8.4 mRNA 46259478 46264387 46259478 ID=MS.gene34272.t1;Parent=MS.gene34272
chr8.4 exon 46259478 46259550 46259478 ID=MS.gene34272.t1.exon1;Parent=MS.gene34272.t1
chr8.4 CDS 46259478 46259550 46259478 ID=cds.MS.gene34272.t1;Parent=MS.gene34272.t1
chr8.4 exon 46259629 46259681 46259629 ID=MS.gene34272.t1.exon2;Parent=MS.gene34272.t1
chr8.4 CDS 46259629 46259681 46259629 ID=cds.MS.gene34272.t1;Parent=MS.gene34272.t1
chr8.4 exon 46260057 46260094 46260057 ID=MS.gene34272.t1.exon3;Parent=MS.gene34272.t1
chr8.4 CDS 46260057 46260094 46260057 ID=cds.MS.gene34272.t1;Parent=MS.gene34272.t1
chr8.4 exon 46262946 46263558 46262946 ID=MS.gene34272.t1.exon4;Parent=MS.gene34272.t1
chr8.4 CDS 46262946 46263558 46262946 ID=cds.MS.gene34272.t1;Parent=MS.gene34272.t1
chr8.4 exon 46264208 46264387 46264208 ID=MS.gene34272.t1.exon5;Parent=MS.gene34272.t1
chr8.4 CDS 46264208 46264387 46264208 ID=cds.MS.gene34272.t1;Parent=MS.gene34272.t1
Gene Sequence

>MS.gene34272

ATGAGGAGAATGAGAATAGGACTAGCAAACAAAGGAAAAGTACCTTGGAATAAGGGAAGGAAACACACTGCAGGTACTTTACATTCGAGTTTATTTTACCATTTTTGGATCATTTTGTTGTTTAAGTGATTAATTATGAAACCAATTGCAGAGACCCGTGAGCGAATTAGGATGAGAACATTAGAGGCTTTGAAGGACCCCAAGGTGAAGTCAAGTAAGAGTCTTTGTTTAGATTGGAGTCTTCCTTTATTTTTGTGTTCACATCACAGTTTGACATGCCTTATTGTTGAAATGATTTAGGCAGGGTTTTAAATAGAGGTTGCGGAGAATCGCAGTTAAATGTGGCCTCAATTGCGGTTTTGGGAACATTAAAAACAGTTATGTTGCAGTGACCACTATTTAAAACCTTGATTTTAGGACTCTGAGATACTATTTTGGTTATGTGGTTCTTTTCCCTCATTAGTCAGATGCTAATTGGTTTTGCAATTTTTTTTTTCTTTTACTTGGTAGTTCCTGGCCCATGATTCACTTCTGGTCATTCATTATATTCATTTTCCCCTTCAACTAAAAAATTTTCAGGTGAAGAAGAAGATGGCTGAACATCCCCGTTGTCATAGGTAAACACAAGACCTTAAAAAAAAAAATATTATGTACGCCTCCTCAAGACAGATTGTAAGCTTATACCCTGCAAAATCATGTTTATGTTATGCATGTAAAAACAAATTATGAAAATTATCAAGGATTAATTGAGAAGGAAAAATTATTTGGTCTTGAACTCTTCAATTTCCATAATTTATTAATATTTCACACACAAGAAAGAATAATCATAATCCTTTGTTAATGTAACCAAAAAACATATCCTTTGTTAATAACATATCTATCTCTCTTTATAAGATATTAGGTTTTTATATTGGGCCTACCCTCACGCCCAGGATTGAACATTTGGAGCGTGACAAGAGTGGCTTGATAGCAAAAACCTGATAGTTGGTGACCCAACGGGTCCTGGATAGGCATGAAATCATATTAGGTTTTTATATTGGACCTAACTCAACCGTACGCAACCAACTTGTAGTGTGACCGGACTCAACCTCACGCCCAGGATTGAACATTTGGAGCGTGACCGGAGTGGTTAGATAGCAAAAACCTGATAGTCGGTGACCCAACGGGTCCTGGATAGGCACTGATATCATATTAGGTTTTTATATTGGTCCTAACTCAACCTTACGCAACGAACATGAAGCGTGACCGGACTCAACCTCACGCCCAGAATTGAACATTTGGAGCGTGACCGGAGTGGCTCGATAGCTAGCAAAAACATGATATACGGTGACCCAACGGGTCCTGGATACGCACTAATAGTTAGGTTTTTATATTGGTCCTAACTCAACCTTACGCAACGAACATGAAGCGTGACTGGACTCAACCTCACGCCCAGAATTGAACATTTGGAGCGTGACCGGAGTGGCTCGATAGCTAGCAAAAACATGATATTCGGTGACCCAACGGGTCCTGGATACGCACTGATAGCATATTAGGTTTTTATATTGGACCTAACACAACCTTACGCAACCAACTTGTAAGGTCAGCGGTGCCTCTCTTTATAAACTTTGGTCAGACCTTATCTTTAATCTATGTGGGACTTGGTTATTCCAATAATATGGAATGTTCCTACTGTACATAATTCTGGTGGAAGAGCACAGGCAACATGCTTGTGATGATCGCATAGTTTTATTGTATGTTACTTGGCTTGGAGAAACCGATTGTAACATATACTACTAAAAGTAACAATGTTTTTTAGGATATATAGCATCTGAATTTGCAAGTTATTGCTGTTTTTTTTTCTCTAAGGGATATATTCATGGGCTTATTTGTCTAAACCTTGAGGTCATTCTATACTTTTATCCCAATTTCTGTTACCCTTATTAATATAAGGGCTGCCTGGTGCACTAAGGGTGTGTTTGGTTACGAAGAGAAATTTTGAAGAGAGAAGTAGGTAAGAGAGAGTTTGAGAAGAGAGAAAAAGGTGAGAGATTGAGTAGATTTGATGTAATGTTTGGTAGAAGAGAAAGATAAGAGATATAGAAGAGAGAGAATAATGTAATTGCTTTTAAAGGACAAAAATGCCCTTAAACACAATAAAAAGAAACTAAATAATTGTTTGGAGTAGAAAAACATAATTTATGCTCCCTTTTATGAAAAAAATAATTTATATTACCTGTAATACATTTTTTTATCAACGTTAACTAAAATCTTCATTTGAATTAATTAAAAAATGAATAATTTTTTTATTAAGTTATAGTACGGAAGTGTGGTTAATTTTTTTATAGTACGTAAGAAAATAAGTTAATTTTTTAAGACGGAAGTGTGGTTCATATTATTTTTGTTGCTAAGTAAATTTATTTTGAGAATTTTTTACTATGAAATTAATTAAAAGTGCAATTAACTTCACCTACAGCACAAGTGCACAACCATTCAGTTATAAATTTACGTTTTTGTATTTTCTTGATGCAATGGAGGGTATAATTGGAAAATTGCAAAAAATGCAACTCTCGCCTGTTTCTTCTCATCCATGAGAAGACTCAAAAATCAGTGGGCCCCACAGATTTTAACTCTCTCTTCTCTCTTTCTCACCACAACCAAACAAGAGAAGTGTAGGACTTGTCTCCTACTTCTCTCTCTTCAACTTCTCTCTCTCCTTTTTCTCCTCTACCAAACACAGTGTAAAGTCCCGCATACGCAAGGTCCGGGAAGGGGTCTCATCAATTGGTGTATTGTACACAGCCTTACCTTGTTTTTTTTTACACAAGAGGTTGTTTCTAGGATTTGAACCCGTGACTTTTCAGTCACGTGACAACAACTTTACCGTTGCACCAAGGTTGTTACCCTTATGTCTGAAAAATATTCAAAGTTGTTTGATGTTTTCTCTTGTAGCCACTTCAATAATATAATTAAGAACAAAAGAAACAGAAATCCATGCATATTTCACTTTTTTTTTTTCTGCAAAAGTATATTATAGGGAGTACAAGGGATACTCAAAACCAATTACAAACAAATGAGAAATCAAACAAGAATCAGACCACCTCTCGATCATTTCACTGTGTTTTCAATAAGGAGTATGCTCTATTTCTATCATTATCTGATAAATAAAGTAAGATTAAAATCAATGATAATGAATACAAGATCATAACAAATTATTCGGACTCAGATGATCAAGCCAACTAGAAACTAATTTCAATCTAGTTACAAACTTCCTTCTAATAGTAATATATTCTACTAAGAAAATTGTTCTAGTATTGTAGTTGCAGCGAGGTATTGTTCGTCCTGTTGGTTTCAATTAGGTATACTATATTCTTACTTGTAAATATTGTTAGACAGAAATTTTTAGGTTGTCTTGCTCTTTGGCATGAATAACAATAGAATGTAGCCAATGGCAATTCATTCTCCAATCTTTTACCAACCTTCCTGCAGTGATCAGATCAAGGAAAAGATAAGTTATTCTCTGAGACGTGTCTGGGAAGAGCGACTGAAGTCACAGCGGGCAGGGGAGCAGTTTTTCCTCTTATGGGAACAAAACATAGCAAATGCAGCCAAGAAAGGAGGGAGTGGTCAAGTTGAGTTAGATTGGGACAGCTATGATAAGATAAAAGAACAACTTGAGTTCCACCGAATTCTGCAGGCAGAGGAAAAGGAAAAAGAAAAGCTGATGACCATTGTTGGAACAAATAAATTATTTCATTTGTGGACGGAAATCATAGCCAAATCAGCAAAGAAAGGAGGGAGTGGAGAAGAAGAACTTGATTGGGATAGCTACGACAAGATAAAAGAAGAAATGATTCTTCTCAATCAGCTTCAGCGTATTACAGAGAAGGCAAAGGCCAAAGAGATGGCCAAAATAAAAGCGGAGAAAGAGGCACAGATAAAAGCGATAAAAAAGGTTATGCTCACTCAAAAGAGAAAAGATCTCCGAGAGAGGACAAAAGCTAGAGAGAATATAAAGAATCAACCATACAAAAATGCAGAGGAAGACAAATGTGCCGAGGATGTTACTCAAGAATTCAAACTTGGCTCTAAATTAACTAAGGTAAGCATTCAATATTTTCTCGTTTATTGGCTGTTTATAAATGCAACATGATGAGTCAATTAAAAATGAGATTAGTGTAAGTATTGAGATGGCAGAATGAATTAAATCTCAGCTAAGTTGCAATTATAGTTTAGTGAAAGGCAAAGGAGAATACTGAGCAAAGTTGGTTAGTTTCTCATTTTTGGACTTATAGAAATAGGAATTTTAATTGTTGAATCCATTTTCTGTCAAGAGATTAACTGCTTGGTTGCTTTGTCTGTTGAAATTTGAAAACACTTGCATTATTGGTTTGACTTATTAGAAACTTAATCATGATAGCCTGTATTTGGATTAAGGATAGAAGCAGATTAAAAAGGCATTTATCTTAGGAATATGCCATTTTGAAAATAGTATTTTGAGCTTAATTGTTATATTCAATTGAGTATTTTCAGCCCGACCCTTTTTTTTGTTATTTATTATGTATGTAATCCTCATTGCTACTTTATTTTTAATAAAAATAAAAACCAAGGGAAAGGTGAAATTTCTATTAATGAAAGTGGCACAAACGACGGTATGATTTCCTTTTAGCTTTTTTGGTGGTGGCCAGGGTTTGAACTCTGGACCTTGCATATTTTAGCTACTAATGATGGTATGTTTTTCCTGTCTTCAGAATCATGTAAATAACATCATCAGAAGTGAAGTAGCTAGAGAAGGAGACGTTATTTATTCCAATTTTCCAACTCACAGTAAATTGGATTTAGAGCTTATCAGAAGAGAGAAAATGCAGAAAAAAGTGTCACTTGCAGATCAGATACAGGCTGCTAAAGTCATAAAGGGGAAACTCCATTGA

Protein sequence

>MS.gene34272.t1

MRRMRIGLANKGKVPWNKGRKHTAETRERIRMRTLEALKDPKVKKKMAEHPRCHSDQIKEKISYSLRRVWEERLKSQRAGEQFFLLWEQNIANAAKKGGSGQVELDWDSYDKIKEQLEFHRILQAEEKEKEKLMTIVGTNKLFHLWTEIIAKSAKKGGSGEEELDWDSYDKIKEEMILLNQLQRITEKAKAKEMAKIKAEKEAQIKAIKKVMLTQKRKDLRERTKARENIKNQPYKNAEEDKCAEDVTQEFKLGSKLTKNHVNNIIRSEVAREGDVIYSNFPTHSKLDLELIRREKMQKKVSLADQIQAAKVIKGKLH