Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58480.t1 | XP_013450632.1 | 86.7 | 497 | 59 | 2 | 1 | 490 | 61 | 557 | 2.30E-219 | 771.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58480.t1 | A0A072UFV0 | 86.7 | 497 | 59 | 2 | 1 | 490 | 61 | 557 | 1.6e-219 | 771.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene58480 | 0.834136 | 3.57E-56 | -1.69E-46 |
| MS.gene049150 | MS.gene58480 | 0.829876 | 4.03E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene58480 | 0.842914 | 1.93E-58 | -1.69E-46 |
| MS.gene049346 | MS.gene58480 | 0.813893 | 2.03E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene58480 | 0.806383 | 8.45E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene58480 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene58480 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene58480 | 0.820332 | 7.25E-53 | -1.69E-46 |
| MS.gene049488 | MS.gene58480 | 0.800905 | 1.16E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene58480 | 0.82633 | 2.88E-54 | -1.69E-46 |
| MS.gene049910 | MS.gene58480 | 0.849668 | 2.79E-60 | -1.69E-46 |
| MS.gene049993 | MS.gene58480 | 0.817625 | 2.99E-52 | -1.69E-46 |
| MS.gene050168 | MS.gene58480 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene58480 | 0.881383 | 2.51E-70 | -1.69E-46 |
| MS.gene050397 | MS.gene58480 | 0.853631 | 2.10E-61 | -1.69E-46 |
| MS.gene050400 | MS.gene58480 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene58480 | 0.827556 | 1.47E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene58480 | -0.862418 | 5.14E-64 | -1.69E-46 |
| MS.gene050432 | MS.gene58480 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene58480 | 0.873007 | 2.05E-67 | -1.69E-46 |
| MS.gene050529 | MS.gene58480 | 0.862324 | 5.49E-64 | -1.69E-46 |
| MS.gene050558 | MS.gene58480 | 0.831737 | 1.41E-55 | -1.69E-46 |
| MS.gene050560 | MS.gene58480 | 0.81991 | 9.06E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene58480 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene58480 | 0.817517 | 3.16E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene58480 | 0.811214 | 7.83E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene58480 | 0.891286 | 4.57E-74 | -1.69E-46 |
| MS.gene050812 | MS.gene58480 | 0.845373 | 4.23E-59 | -1.69E-46 |
| MS.gene050820 | MS.gene58480 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene58480 | 0.834768 | 2.48E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene58480 | 0.841299 | 5.17E-58 | -1.69E-46 |
| MS.gene051208 | MS.gene58480 | 0.807331 | 5.33E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene58480 | 0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene58480 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene58480 | 0.893502 | 5.92E-75 | -1.69E-46 |
| MS.gene051582 | MS.gene58480 | 0.882112 | 1.37E-70 | -1.69E-46 |
| MS.gene051860 | MS.gene58480 | 0.8685 | 6.24E-66 | -1.69E-46 |
| MS.gene051983 | MS.gene58480 | 0.84732 | 1.25E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene58480 | -0.87047 | 1.42E-66 | -1.69E-46 |
| MS.gene052077 | MS.gene58480 | 0.839187 | 1.84E-57 | -1.69E-46 |
| MS.gene052078 | MS.gene58480 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene052128 | MS.gene58480 | -0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene58480 | 0.829323 | 5.49E-55 | -1.69E-46 |
| MS.gene052135 | MS.gene58480 | 0.84609 | 2.70E-59 | -1.69E-46 |
| MS.gene052136 | MS.gene58480 | 0.80442 | 2.18E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene58480 | 0.886057 | 4.76E-72 | -1.69E-46 |
| MS.gene052253 | MS.gene58480 | 0.888479 | 5.70E-73 | -1.69E-46 |
| MS.gene052255 | MS.gene58480 | 0.831165 | 1.95E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene58480 | 0.8697 | 2.54E-66 | -1.69E-46 |
| MS.gene052340 | MS.gene58480 | 0.887008 | 2.08E-72 | -1.69E-46 |
| MS.gene052414 | MS.gene58480 | 0.816938 | 4.27E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene58480 | 0.868107 | 8.35E-66 | -1.69E-46 |
| MS.gene052484 | MS.gene58480 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene58480 | 0.87184 | 5.03E-67 | -1.69E-46 |
| MS.gene052982 | MS.gene58480 | 0.826517 | 2.60E-54 | -1.69E-46 |
| MS.gene053169 | MS.gene58480 | 0.82307 | 1.69E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene58480 | 0.813753 | 2.18E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene58480 | 0.830968 | 2.18E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene58480 | 0.845682 | 3.49E-59 | -1.69E-46 |
| MS.gene053758 | MS.gene58480 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene58480 | 0.873258 | 1.69E-67 | -1.69E-46 |
| MS.gene053928 | MS.gene58480 | 0.835008 | 2.15E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene58480 | 0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene58480 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene58480 | 0.827413 | 1.59E-54 | -1.69E-46 |
| MS.gene05413 | MS.gene58480 | 0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene58480 | 0.868822 | 4.91E-66 | -1.69E-46 |
| MS.gene054349 | MS.gene58480 | 0.837402 | 5.31E-57 | -1.69E-46 |
| MS.gene054556 | MS.gene58480 | 0.849578 | 2.96E-60 | -1.69E-46 |
| MS.gene05455 | MS.gene58480 | 0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene58480 | 0.877996 | 4.01E-69 | -1.69E-46 |
| MS.gene054917 | MS.gene58480 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene054920 | MS.gene58480 | 0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene58480 | 0.808055 | 3.74E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene58480 | 0.803156 | 3.99E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene58480 | 0.823561 | 1.30E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene58480 | 0.892028 | 2.32E-74 | -1.69E-46 |
| MS.gene055277 | MS.gene58480 | 0.822192 | 2.70E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene58480 | 0.853705 | 2.00E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene58480 | 0.828374 | 9.32E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene58480 | 0.833177 | 6.19E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene58480 | 0.83488 | 2.32E-56 | -1.69E-46 |
| MS.gene055539 | MS.gene58480 | 0.846078 | 2.72E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene58480 | 0.898736 | 3.96E-77 | -1.69E-46 |
| MS.gene055564 | MS.gene58480 | 0.826126 | 3.22E-54 | -1.69E-46 |
| MS.gene05556 | MS.gene58480 | 0.822137 | 2.78E-53 | -1.69E-46 |
| MS.gene055601 | MS.gene58480 | -0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene58480 | 0.81386 | 2.07E-51 | -1.69E-46 |
| MS.gene05594 | MS.gene58480 | 0.837287 | 5.68E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene58480 | 0.840842 | 6.82E-58 | -1.69E-46 |
| MS.gene056233 | MS.gene58480 | 0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene58480 | 0.884925 | 1.26E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene58480 | 0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene056451 | MS.gene58480 | 0.828025 | 1.13E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene58480 | 0.824425 | 8.13E-54 | -1.69E-46 |
| MS.gene056514 | MS.gene58480 | 0.819698 | 1.01E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene58480 | 0.846549 | 2.03E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene58480 | 0.844898 | 5.68E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene58480 | 0.873645 | 1.25E-67 | -1.69E-46 |
| MS.gene056796 | MS.gene58480 | 0.816051 | 6.75E-52 | -1.69E-46 |
| MS.gene056846 | MS.gene58480 | 0.811328 | 7.40E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene58480 | -0.84856 | 5.67E-60 | -1.69E-46 |
| MS.gene056979 | MS.gene58480 | 0.83969 | 1.36E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene58480 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene58480 | 0.847326 | 1.24E-59 | -1.69E-46 |
| MS.gene057121 | MS.gene58480 | 0.875412 | 3.15E-68 | -1.69E-46 |
| MS.gene057124 | MS.gene58480 | 0.837082 | 6.41E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene58480 | 0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene58480 | 0.851868 | 6.70E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene58480 | 0.861352 | 1.09E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene58480 | 0.844342 | 8.02E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene58480 | 0.851549 | 8.26E-61 | -1.69E-46 |
| MS.gene057469 | MS.gene58480 | 0.820128 | 8.08E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene58480 | 0.840945 | 6.41E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene58480 | 0.87336 | 1.56E-67 | -1.69E-46 |
| MS.gene057823 | MS.gene58480 | 0.866675 | 2.40E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene58480 | 0.830912 | 2.25E-55 | -1.69E-46 |
| MS.gene057888 | MS.gene58480 | 0.812305 | 4.53E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene58480 | 0.906488 | 1.41E-80 | -1.69E-46 |
| MS.gene058007 | MS.gene58480 | 0.837091 | 6.38E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene58480 | 0.881827 | 1.74E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene58480 | 0.87101 | 9.46E-67 | -1.69E-46 |
| MS.gene058233 | MS.gene58480 | 0.831437 | 1.67E-55 | -1.69E-46 |
| MS.gene058276 | MS.gene58480 | 0.851773 | 7.13E-61 | -1.69E-46 |
| MS.gene058293 | MS.gene58480 | 0.823532 | 1.32E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene58480 | 0.801548 | 8.55E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene58480 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene58480 | 0.817803 | 2.73E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene58480 | 0.835012 | 2.15E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene58480 | 0.848596 | 5.54E-60 | -1.69E-46 |
| MS.gene058700 | MS.gene58480 | 0.864428 | 1.22E-64 | -1.69E-46 |
| MS.gene058710 | MS.gene58480 | 0.824383 | 8.32E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene58480 | 0.811921 | 5.50E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene58480 | 0.854233 | 1.41E-61 | -1.69E-46 |
| MS.gene058928 | MS.gene58480 | 0.841188 | 5.53E-58 | -1.69E-46 |
| MS.gene058949 | MS.gene58480 | 0.812363 | 4.40E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene58480 | 0.826949 | 2.05E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene58480 | 0.906985 | 8.26E-81 | -1.69E-46 |
| MS.gene059082 | MS.gene58480 | 0.832958 | 7.02E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene58480 | 0.877565 | 5.68E-69 | -1.69E-46 |
| MS.gene059247 | MS.gene58480 | 0.807725 | 4.39E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene58480 | 0.844643 | 6.66E-59 | -1.69E-46 |
| MS.gene059294 | MS.gene58480 | 0.817022 | 4.09E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene58480 | 0.827392 | 1.60E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene58480 | 0.891575 | 3.50E-74 | -1.69E-46 |
| MS.gene059462 | MS.gene58480 | 0.847748 | 9.51E-60 | -1.69E-46 |
| MS.gene059518 | MS.gene58480 | 0.812504 | 4.10E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene58480 | 0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene58480 | 0.859996 | 2.81E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene58480 | 0.855756 | 5.10E-62 | -1.69E-46 |
| MS.gene059688 | MS.gene58480 | 0.872924 | 2.19E-67 | -1.69E-46 |
| MS.gene059692 | MS.gene58480 | 0.861437 | 1.03E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene58480 | 0.863808 | 1.91E-64 | -1.69E-46 |
| MS.gene059807 | MS.gene58480 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene58480 | 0.866065 | 3.74E-65 | -1.69E-46 |
| MS.gene059894 | MS.gene58480 | 0.836639 | 8.32E-57 | -1.69E-46 |
| MS.gene059933 | MS.gene58480 | 0.826114 | 3.24E-54 | -1.69E-46 |
| MS.gene060247 | MS.gene58480 | 0.827211 | 1.77E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene58480 | 0.870148 | 1.82E-66 | -1.69E-46 |
| MS.gene060407 | MS.gene58480 | 0.858284 | 9.15E-63 | -1.69E-46 |
| MS.gene060986 | MS.gene58480 | 0.847158 | 1.38E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene58480 | 0.872298 | 3.54E-67 | -1.69E-46 |
| MS.gene061051 | MS.gene58480 | -0.847093 | 1.44E-59 | -1.69E-46 |
| MS.gene061114 | MS.gene58480 | -0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene58480 | 0.86911 | 3.96E-66 | -1.69E-46 |
| MS.gene061159 | MS.gene58480 | 0.879713 | 9.95E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58480.t1 | MTR_7g117530 | 93.360 | 497 | 26 | 2 | 1 | 490 | 61 | 557 | 0.0 | 897 |
| MS.gene58480.t1 | MTR_7g117530 | 93.317 | 419 | 21 | 2 | 79 | 490 | 1 | 419 | 0.0 | 742 |
| MS.gene58480.t1 | MTR_7g117530 | 91.892 | 407 | 26 | 2 | 91 | 490 | 17 | 423 | 0.0 | 702 |
| MS.gene58480.t1 | MTR_8g464010 | 39.355 | 155 | 86 | 1 | 25 | 171 | 60 | 214 | 3.28e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58480.t1 | AT1G53800 | 48.283 | 495 | 196 | 11 | 30 | 487 | 99 | 570 | 3.25e-136 | 405 |
| MS.gene58480.t1 | AT1G53800 | 48.283 | 495 | 196 | 11 | 30 | 487 | 99 | 570 | 3.25e-136 | 405 |
| MS.gene58480.t1 | AT1G53800 | 48.283 | 495 | 196 | 11 | 30 | 487 | 95 | 566 | 5.81e-136 | 404 |
| MS.gene58480.t1 | AT1G53800 | 44.419 | 439 | 184 | 11 | 86 | 487 | 1 | 416 | 7.70e-101 | 309 |
| MS.gene58480.t1 | AT1G53250 | 42.553 | 141 | 79 | 1 | 29 | 169 | 93 | 231 | 2.16e-26 | 110 |
Find 106 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGATCGGCTTAACAATTT+TGG | 0.147374 | 7.4:-125186 | None:intergenic |
| TACAAGTTCTCTGAAGATTT+TGG | 0.168425 | 7.4:+125901 | MS.gene58480:CDS |
| AGCTTCAGCTATAAGCTTTC+TGG | 0.177934 | 7.4:-125716 | None:intergenic |
| CCTTCTCTGTTCAGGGGACT+TGG | 0.194217 | 7.4:-123852 | None:intergenic |
| CTATAACTGGGCCTTGTTCT+AGG | 0.249045 | 7.4:-125092 | None:intergenic |
| CAGAAGCTATTGCTGCAAAA+TGG | 0.252169 | 7.4:+123882 | MS.gene58480:CDS |
| ATGGGCAGTCTTGGTTTATC+TGG | 0.254259 | 7.4:-126011 | None:intergenic |
| AAGAAAATCCCCTGCCTATA+AGG | 0.268562 | 7.4:+125217 | MS.gene58480:CDS |
| TCAGAAATGGCCCAAGTAAA+TGG | 0.271344 | 7.4:+125853 | MS.gene58480:CDS |
| GTTTCCCTTTGCTGATTTGA+TGG | 0.273722 | 7.4:-126030 | None:intergenic |
| GGAGAGTTGTGCACTATAAC+TGG | 0.300149 | 7.4:-125105 | None:intergenic |
| AAGTGATTGTTGTTGAATTT+AGG | 0.317748 | 7.4:-122816 | None:intergenic |
| AGAATTTCTAAAGCTAATAA+AGG | 0.335079 | 7.4:+122936 | MS.gene58480:CDS |
| TCCCTGGAGAGACCAGTTAA+TGG | 0.338872 | 7.4:+125931 | MS.gene58480:CDS |
| TTGGGTGCTCTGTTGCTAAC+TGG | 0.340197 | 7.4:-123833 | None:intergenic |
| CTGTTCATCCAAGGTTTCAT+AGG | 0.344649 | 7.4:-123756 | None:intergenic |
| TGCTTTCTTCCTTTGTTCCA+TGG | 0.347511 | 7.4:-122966 | None:intergenic |
| CCATTGGTTAGGTGAAGTTC+TGG | 0.357997 | 7.4:-125958 | None:intergenic |
| TTGTATGGCTTGAGTTTGTC+TGG | 0.361484 | 7.4:-125306 | None:intergenic |
| AAAATGAAGTTGACTAATCT+TGG | 0.365767 | 7.4:+123454 | MS.gene58480:CDS |
| ATTCACCAAAGGATCCTTAT+AGG | 0.367988 | 7.4:-125231 | None:intergenic |
| GGTCTACCTTGCTTGTTGTA+TGG | 0.369499 | 7.4:-125321 | None:intergenic |
| GCTGATTTGATGGGCAGTCT+TGG | 0.385985 | 7.4:-126020 | None:intergenic |
| TAGATTGTGTTTCATCTTCA+AGG | 0.386322 | 7.4:-126098 | None:intergenic |
| CCCTGCCTATAAGGATCCTT+TGG | 0.391549 | 7.4:+125226 | MS.gene58480:CDS |
| CAGAAACTTTGCAGAAGATC+AGG | 0.392693 | 7.4:+123094 | MS.gene58480:intron |
| TAATTATGATGAAGCATAAT+CGG | 0.403362 | 7.4:-122861 | None:intergenic |
| CGCCATTAACTGGTCTCTCC+AGG | 0.404361 | 7.4:-125933 | None:intergenic |
| GTTCTTTATCATCTCTAGCT+TGG | 0.409338 | 7.4:-125255 | None:intergenic |
| GCATCTAGGCAAGGCTTTGT+TGG | 0.411974 | 7.4:+123710 | MS.gene58480:CDS |
| ATGTTGTGCGTCCATTTACT+TGG | 0.417420 | 7.4:-125864 | None:intergenic |
| TAGGCAAGGCTTTGTTGGTC+AGG | 0.417991 | 7.4:+123715 | MS.gene58480:CDS |
| CTTCTCTGTTCAGGGGACTT+GGG | 0.418289 | 7.4:-123851 | None:intergenic |
| CGCAGCAACCTCCAGTGCCT+TGG | 0.418723 | 7.4:-125656 | None:intergenic |
| AGTTCTGGAACGCCATTAAC+TGG | 0.430767 | 7.4:-125943 | None:intergenic |
| ATTTAATTGCAGAAGCATCT+AGG | 0.431183 | 7.4:+123696 | MS.gene58480:CDS |
| TGAGAAAGCGGCCAAGGCAC+TGG | 0.455747 | 7.4:+125645 | MS.gene58480:CDS |
| TTTCCCTTTGCTGATTTGAT+GGG | 0.456711 | 7.4:-126029 | None:intergenic |
| TAGTTTGAGCGAGGTCAATC+AGG | 0.457771 | 7.4:+125798 | MS.gene58480:CDS |
| TTCAGTAGAATGATGATACT+TGG | 0.462498 | 7.4:-125063 | None:intergenic |
| TTACTTGGGCCATTTCTGAA+TGG | 0.473231 | 7.4:-125849 | None:intergenic |
| AGTTCAAAACCATTCAGAAA+TGG | 0.473350 | 7.4:+125840 | MS.gene58480:CDS |
| TCAGCAAAGGGAAACAGAAC+AGG | 0.475127 | 7.4:+126038 | MS.gene58480:CDS |
| ACCAAAGGATCCTTATAGGC+AGG | 0.479827 | 7.4:-125227 | None:intergenic |
| AAGAAGCACATCCATTGGTT+AGG | 0.484112 | 7.4:-125969 | None:intergenic |
| AGAAGCTATTGCTGCAAAAT+GGG | 0.486163 | 7.4:+123883 | MS.gene58480:CDS |
| TCAGAGAACTTGTAGAAGCT+TGG | 0.494752 | 7.4:-125892 | None:intergenic |
| ATTAGAGAAGACTGAGCAAT+GGG | 0.497339 | 7.4:-125688 | None:intergenic |
| TTGCAGAGCAGACTCTTTCA+CGG | 0.513414 | 7.4:-125037 | None:intergenic |
| TTGGTCAGGAAGAGCTGCAA+TGG | 0.516970 | 7.4:+123729 | MS.gene58480:CDS |
| AATGAGGCGTGGGAGGAAGA+TGG | 0.526849 | 7.4:+123643 | MS.gene58480:CDS |
| AGATTGTGTTTCATCTTCAA+GGG | 0.528242 | 7.4:-126097 | None:intergenic |
| AGATGACTGTAGTGTCCCTT+CGG | 0.529223 | 7.4:+125774 | MS.gene58480:CDS |
| CTGCTTAAGCTGTTCATCCA+AGG | 0.529761 | 7.4:-123765 | None:intergenic |
| TGTTGAAGAAAGGAAACAAA+TGG | 0.535795 | 7.4:+123802 | MS.gene58480:CDS |
| AACTTCTCGCTCTCATCAAG+TGG | 0.537218 | 7.4:-122903 | None:intergenic |
| ATCTGGCTATTCAAACTGAA+AGG | 0.537699 | 7.4:-125994 | None:intergenic |
| GCGTGGGAGGAAGATGGTGC+AGG | 0.541404 | 7.4:+123649 | MS.gene58480:CDS |
| CTGCCCATCAAATCAGCAAA+GGG | 0.542744 | 7.4:+126026 | MS.gene58480:CDS |
| AGCTATGGGAAATGAGGCGT+GGG | 0.551123 | 7.4:+123633 | MS.gene58480:CDS |
| ATGGAATTCCTATGAAACCT+TGG | 0.554470 | 7.4:+123748 | MS.gene58480:CDS |
| AGTATCATCATTCTACTGAA+AGG | 0.554917 | 7.4:+125066 | MS.gene58480:CDS |
| AAAGGAAGAAAGCACAGTCC+CGG | 0.557605 | 7.4:+122975 | MS.gene58480:CDS |
| TGTTGTGCGTCCATTTACTT+GGG | 0.559138 | 7.4:-125863 | None:intergenic |
| ATTCAACAACAATCACTTGG+AGG | 0.563513 | 7.4:+122821 | MS.gene58480:CDS |
| TGAAGCTGAGAAAGCGGCCA+AGG | 0.564202 | 7.4:+125639 | MS.gene58480:CDS |
| TGAGAAAGCTATGGGAAATG+AGG | 0.567042 | 7.4:+123627 | MS.gene58480:CDS |
| CTTGGATGAACAGCTTAAGC+AGG | 0.568138 | 7.4:+123766 | MS.gene58480:CDS |
| CTAATAAAGGAAACACTCCA+TGG | 0.572287 | 7.4:+122949 | MS.gene58480:CDS |
| CCTCGCTATGCAGAATCCTA+AGG | 0.572868 | 7.4:+123128 | MS.gene58480:CDS |
| CAAGGCACTGGAGGTTGCTG+CGG | 0.574810 | 7.4:+125657 | MS.gene58480:CDS |
| TGCTGGAGTGAGAAAGCTAT+GGG | 0.576084 | 7.4:+123619 | MS.gene58480:CDS |
| GGTTGCTCAGTGTTGAAGAA+AGG | 0.576460 | 7.4:+123792 | MS.gene58480:CDS |
| CCAAGTCCCCTGAACAGAGA+AGG | 0.577586 | 7.4:+123852 | MS.gene58480:CDS |
| CCAAAGGATCCTTATAGGCA+GGG | 0.578428 | 7.4:-125226 | None:intergenic |
| TGATGAAGCATAATCGGATG+AGG | 0.579917 | 7.4:-122855 | None:intergenic |
| CAAAGGATCCTTATAGGCAG+GGG | 0.581887 | 7.4:-125225 | None:intergenic |
| GTGCTGGAGTGAGAAAGCTA+TGG | 0.583096 | 7.4:+123618 | MS.gene58480:CDS |
| AGAAACTTTGCAGAAGATCA+GGG | 0.584197 | 7.4:+123095 | MS.gene58480:intron |
| AGGAGAGTTGCTGCTTTGAG+TGG | 0.585215 | 7.4:+123669 | MS.gene58480:CDS |
| AGGTAAAGAAGCACATCCAT+TGG | 0.589919 | 7.4:-125974 | None:intergenic |
| TAAATTCAACAACAATCACT+TGG | 0.594861 | 7.4:+122818 | MS.gene58480:CDS |
| GCCATTAACTGGTCTCTCCA+GGG | 0.596953 | 7.4:-125932 | None:intergenic |
| ATTGCAGAAGCATCTAGGCA+AGG | 0.597944 | 7.4:+123701 | MS.gene58480:CDS |
| ACCTCGCTCAAACTAACCGA+AGG | 0.599556 | 7.4:-125790 | None:intergenic |
| GAGAGTTGTGCACTATAACT+GGG | 0.604300 | 7.4:-125104 | None:intergenic |
| TATGGGAAATGAGGCGTGGG+AGG | 0.606508 | 7.4:+123636 | MS.gene58480:CDS |
| CCCTTCGGTTAGTTTGAGCG+AGG | 0.606707 | 7.4:+125789 | MS.gene58480:CDS |
| TATTAGAGAAGACTGAGCAA+TGG | 0.606763 | 7.4:-125689 | None:intergenic |
| AAGCTATGGGAAATGAGGCG+TGG | 0.610945 | 7.4:+123632 | MS.gene58480:CDS |
| GGAAACACTCCATGGAACAA+AGG | 0.613565 | 7.4:+122957 | MS.gene58480:CDS |
| ACTGCCCATCAAATCAGCAA+AGG | 0.614011 | 7.4:+126025 | MS.gene58480:CDS |
| TGATTGTTGTTGAATTTAGG+TGG | 0.614725 | 7.4:-122813 | None:intergenic |
| ATGAACAGCTTAAGCAGGAG+TGG | 0.618338 | 7.4:+123771 | MS.gene58480:CDS |
| GATTGCTGAAGCTGAGAAAG+CGG | 0.618657 | 7.4:+125633 | MS.gene58480:CDS |
| CAGAGCACAAAGAGCTTCCG+CGG | 0.621196 | 7.4:+125280 | MS.gene58480:CDS |
| TTGAGTTTGTCTGGTATCCG+CGG | 0.621664 | 7.4:-125297 | None:intergenic |
| CTCAAGCCATACAACAAGCA+AGG | 0.624160 | 7.4:+125315 | MS.gene58480:CDS |
| CTGAAAGGAAACCTAGAACA+AGG | 0.624217 | 7.4:+125081 | MS.gene58480:CDS |
| CCAGAACTTCACCTAACCAA+TGG | 0.625712 | 7.4:+125958 | MS.gene58480:CDS |
| AAGAAAGGAAACAAATGGCG+AGG | 0.628017 | 7.4:+123807 | MS.gene58480:CDS |
| GAAAGCGGCCAAGGCACTGG+AGG | 0.643194 | 7.4:+125648 | MS.gene58480:CDS |
| AGAAAGGAAACAAATGGCGA+GGG | 0.644627 | 7.4:+123808 | MS.gene58480:CDS |
| TCTAGCTTGGAATTCACCAA+AGG | 0.650621 | 7.4:-125242 | None:intergenic |
| CCTCGCTCAAACTAACCGAA+GGG | 0.662267 | 7.4:-125789 | None:intergenic |
| CCTTAGGATTCTGCATAGCG+AGG | 0.673579 | 7.4:-123128 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATTAAAGAAATTATATT+AGG | - | chr7.4:124526-124545 | None:intergenic | 10.0% |
| !!! | AAATACTAAATTTCAATTTT+CGG | - | chr7.4:125398-125417 | None:intergenic | 10.0% |
| !!! | TATTATATTAACTTTTGTTT+TGG | + | chr7.4:124447-124466 | MS.gene58480:intron | 10.0% |
| !!! | TTATTTTAATTGATTTCTTT+TGG | + | chr7.4:125355-125374 | MS.gene58480:intron | 10.0% |
| !! | ACATTAAAAAGTAACAAAAA+TGG | - | chr7.4:123514-123533 | None:intergenic | 15.0% |
| !! | TATTTCATGAAAATATATAC+AGG | - | chr7.4:125592-125611 | None:intergenic | 15.0% |
| !!! | TATAAATTACATGTTTTAGA+TGG | + | chr7.4:124706-124725 | MS.gene58480:intron | 15.0% |
| !! | AAATTATATTAGGCACTAAT+TGG | - | chr7.4:124516-124535 | None:intergenic | 20.0% |
| !! | ATATAAAAGAATTTACACCT+CGG | - | chr7.4:124597-124616 | None:intergenic | 20.0% |
| !! | ATCAATAGTTATGTCATTAT+TGG | - | chr7.4:124180-124199 | None:intergenic | 20.0% |
| !! | CCTAGTATAATTAAAAAGTT+GGG | + | chr7.4:124563-124582 | MS.gene58480:intron | 20.0% |
| !! | GATTTAACAGAAAAATATGT+TGG | - | chr7.4:125010-125029 | None:intergenic | 20.0% |
| !! | TAAGATTCAAAGAAAGAAAA+GGG | + | chr7.4:123279-123298 | MS.gene58480:intron | 20.0% |
| !! | TAATTATACTAGGCATTTAT+TGG | - | chr7.4:124556-124575 | None:intergenic | 20.0% |
| !! | TAATTATGATGAAGCATAAT+CGG | - | chr7.4:122864-122883 | None:intergenic | 20.0% |
| !! | TCTTAAATCTTAAAACAATG+AGG | + | chr7.4:123197-123216 | MS.gene58480:intron | 20.0% |
| !! | TTAAGATTCAAAGAAAGAAA+AGG | + | chr7.4:123278-123297 | MS.gene58480:intron | 20.0% |
| !!! | ACATATTTTTCTGTTAAATC+AGG | + | chr7.4:125010-125029 | MS.gene58480:intron | 20.0% |
| !!! | AGAATTTCTAAAGCTAATAA+AGG | + | chr7.4:122936-122955 | MS.gene58480:CDS | 20.0% |
| !!! | AGATTAAATCATAAAAGTAC+AGG | + | chr7.4:125532-125551 | MS.gene58480:intron | 20.0% |
| !!! | ATGTGTTTCTAGTTAATAAT+GGG | - | chr7.4:124074-124093 | None:intergenic | 20.0% |
| !!! | TTTCTGTAGGATTTTATTTA+GGG | + | chr7.4:124947-124966 | MS.gene58480:intron | 20.0% |
| !!! | TTTTCTGTAGGATTTTATTT+AGG | + | chr7.4:124946-124965 | MS.gene58480:intron | 20.0% |
| ! | AAAAGTAACAAAAATGGTGA+TGG | - | chr7.4:123508-123527 | None:intergenic | 25.0% |
| ! | AAAATGAAGTTGACTAATCT+TGG | + | chr7.4:123454-123473 | MS.gene58480:CDS | 25.0% |
| ! | ACTTAGATCAATTAGAATAG+AGG | + | chr7.4:124404-124423 | MS.gene58480:intron | 25.0% |
| ! | AGGAAGAAAAAGAAAAGAAT+TGG | - | chr7.4:123405-123424 | None:intergenic | 25.0% |
| ! | ATGATCATAAAAAACCAAAG+AGG | - | chr7.4:125471-125490 | None:intergenic | 25.0% |
| ! | ATGTTAACATATACACTTAC+GGG | - | chr7.4:123914-123933 | None:intergenic | 25.0% |
| ! | CGTATTTGCAAATTAAAAAC+AGG | + | chr7.4:124332-124351 | MS.gene58480:intron | 25.0% |
| ! | GAAAGAATATCAACATAGAA+AGG | - | chr7.4:124481-124500 | None:intergenic | 25.0% |
| ! | GATGTTAACATATACACTTA+CGG | - | chr7.4:123915-123934 | None:intergenic | 25.0% |
| ! | GCCTAGTATAATTAAAAAGT+TGG | + | chr7.4:124562-124581 | MS.gene58480:intron | 25.0% |
| ! | TAAATTCAACAACAATCACT+TGG | + | chr7.4:122818-122837 | MS.gene58480:CDS | 25.0% |
| ! | TAATTAAAAAGTTGGGTCAA+AGG | + | chr7.4:124570-124589 | MS.gene58480:intron | 25.0% |
| ! | TATAAAAGAATTTACACCTC+GGG | - | chr7.4:124596-124615 | None:intergenic | 25.0% |
| ! | TTAGTTAGTAAGTAAGTTAC+CGG | - | chr7.4:122997-123016 | None:intergenic | 25.0% |
| ! | TTGTATAGACTATAAAAGAG+AGG | - | chr7.4:124636-124655 | None:intergenic | 25.0% |
| !! | AAGTGATTGTTGTTGAATTT+AGG | - | chr7.4:122819-122838 | None:intergenic | 25.0% |
| !! | ATCTATCTTTTGTGTATCAA+TGG | - | chr7.4:125758-125777 | None:intergenic | 25.0% |
| !! | CAACATCCATTTTCTATATA+GGG | - | chr7.4:124769-124788 | None:intergenic | 25.0% |
| !! | CTCTTTTATAGTCTATACAA+AGG | + | chr7.4:124636-124655 | MS.gene58480:intron | 25.0% |
| !! | TCAACATCCATTTTCTATAT+AGG | - | chr7.4:124770-124789 | None:intergenic | 25.0% |
| !!! | ATCAGAATCTCTTTTTGAAA+TGG | - | chr7.4:125141-125160 | None:intergenic | 25.0% |
| !!! | CATGTGTTTCTAGTTAATAA+TGG | - | chr7.4:124075-124094 | None:intergenic | 25.0% |
| !!! | CCCAACTTTTTAATTATACT+AGG | - | chr7.4:124566-124585 | None:intergenic | 25.0% |
| !!! | TCTTTGGTTTTTTATGATCA+TGG | + | chr7.4:125470-125489 | MS.gene58480:intron | 25.0% |
| !!! | TTTCCAGTTTTGTAAAAGAA+TGG | + | chr7.4:124219-124238 | MS.gene58480:intron | 25.0% |
| !!! | TTTTGAAATGGATTTCTTCT+TGG | - | chr7.4:125129-125148 | None:intergenic | 25.0% |
| ACAAAAATGAAGATTAGTGC+TGG | + | chr7.4:123602-123621 | MS.gene58480:CDS | 30.0% | |
| AGATTGTGTTTCATCTTCAA+GGG | - | chr7.4:126100-126119 | None:intergenic | 30.0% | |
| AGTATCATCATTCTACTGAA+AGG | + | chr7.4:125066-125085 | MS.gene58480:CDS | 30.0% | |
| AGTTCAAAACCATTCAGAAA+TGG | + | chr7.4:125840-125859 | MS.gene58480:CDS | 30.0% | |
| ATAAAGAAGGAGATTGTATG+GGG | - | chr7.4:123564-123583 | None:intergenic | 30.0% | |
| CAAAACTTATCTAGACCATT+TGG | - | chr7.4:124857-124876 | None:intergenic | 30.0% | |
| CAGATTCTTGTAATTGCTAA+CGG | + | chr7.4:124286-124305 | MS.gene58480:intron | 30.0% | |
| CATAAAGAAGGAGATTGTAT+GGG | - | chr7.4:123565-123584 | None:intergenic | 30.0% | |
| CGACTATTCTGATATTCATT+AGG | - | chr7.4:124740-124759 | None:intergenic | 30.0% | |
| GAAAATGATAAGAACCTCTT+TGG | + | chr7.4:125454-125473 | MS.gene58480:intron | 30.0% | |
| GCAATTACAAGAATCTGTAT+AGG | - | chr7.4:124283-124302 | None:intergenic | 30.0% | |
| TACAGGATAATAGTTACAGT+TGG | - | chr7.4:125575-125594 | None:intergenic | 30.0% | |
| TAGATTGTGTTTCATCTTCA+AGG | - | chr7.4:126101-126120 | None:intergenic | 30.0% | |
| TAGTTAGTAAGTAAGTTACC+GGG | - | chr7.4:122996-123015 | None:intergenic | 30.0% | |
| TATACTAGGCATTTATTGGA+AGG | - | chr7.4:124552-124571 | None:intergenic | 30.0% | |
| TGTTGAAGAAAGGAAACAAA+TGG | + | chr7.4:123802-123821 | MS.gene58480:CDS | 30.0% | |
| TTCAGTAGAATGATGATACT+TGG | - | chr7.4:125066-125085 | None:intergenic | 30.0% | |
| ! | CTTTTACAAAACTGGAAAAC+AGG | - | chr7.4:124217-124236 | None:intergenic | 30.0% |
| ! | GAGGTTCTTATCATTTTCTT+AGG | - | chr7.4:125452-125471 | None:intergenic | 30.0% |
| ! | TCACCATTCTTTTACAAAAC+TGG | - | chr7.4:124225-124244 | None:intergenic | 30.0% |
| ! | TGATTGTTGTTGAATTTAGG+TGG | - | chr7.4:122816-122835 | None:intergenic | 30.0% |
| !! | AAGAGAGAAAAGTACCAAAA+AGG | - | chr7.4:124982-125001 | None:intergenic | 30.0% |
| !! | AGAGAGAAAAGTACCAAAAA+GGG | - | chr7.4:124981-125000 | None:intergenic | 30.0% |
| !! | ATTTAATTGCAGAAGCATCT+AGG | + | chr7.4:123696-123715 | MS.gene58480:CDS | 30.0% |
| !! | GTTTCTAGTTAATAATGGGA+GGG | - | chr7.4:124070-124089 | None:intergenic | 30.0% |
| !! | TAACAAAAATGGTGATGGAA+AGG | - | chr7.4:123503-123522 | None:intergenic | 30.0% |
| !! | TACAAGTTCTCTGAAGATTT+TGG | + | chr7.4:125901-125920 | MS.gene58480:CDS | 30.0% |
| !! | TGTTTCTAGTTAATAATGGG+AGG | - | chr7.4:124071-124090 | None:intergenic | 30.0% |
| !!! | TTGGTTTTTTATGATCATGG+TGG | + | chr7.4:125473-125492 | MS.gene58480:intron | 30.0% |
| AAAATCAAAGTCCACAGACA+AGG | - | chr7.4:124810-124829 | None:intergenic | 35.0% | |
| AAAATCTGTTGCGTGAGATT+TGG | - | chr7.4:124376-124395 | None:intergenic | 35.0% | |
| AAGTTACACGTTACACCAAA+TGG | + | chr7.4:124839-124858 | MS.gene58480:intron | 35.0% | |
| AGAAACTTTGCAGAAGATCA+GGG | + | chr7.4:123095-123114 | MS.gene58480:intron | 35.0% | |
| AGAAGCTATTGCTGCAAAAT+GGG | + | chr7.4:123883-123902 | MS.gene58480:CDS | 35.0% | |
| ATAGTCTATACAAAGGTTGC+AGG | + | chr7.4:124643-124662 | MS.gene58480:intron | 35.0% | |
| ATCTGGCTATTCAAACTGAA+AGG | - | chr7.4:125997-126016 | None:intergenic | 35.0% | |
| ATGGAATTCCTATGAAACCT+TGG | + | chr7.4:123748-123767 | MS.gene58480:CDS | 35.0% | |
| ATTAGAGAAGACTGAGCAAT+GGG | - | chr7.4:125691-125710 | None:intergenic | 35.0% | |
| ATTCAACAACAATCACTTGG+AGG | + | chr7.4:122821-122840 | MS.gene58480:CDS | 35.0% | |
| ATTCACCAAAGGATCCTTAT+AGG | - | chr7.4:125234-125253 | None:intergenic | 35.0% | |
| ATTTGGCACAACAAAACATC+AGG | - | chr7.4:124359-124378 | None:intergenic | 35.0% | |
| CCATAAAGAAGGAGATTGTA+TGG | - | chr7.4:123566-123585 | None:intergenic | 35.0% | |
| CCATACAATCTCCTTCTTTA+TGG | + | chr7.4:123563-123582 | MS.gene58480:intron | 35.0% | |
| CCCTATTGCAACTAAAAAGT+GGG | + | chr7.4:126125-126144 | MS.gene58480:CDS | 35.0% | |
| CTAATAAAGGAAACACTCCA+TGG | + | chr7.4:122949-122968 | MS.gene58480:CDS | 35.0% | |
| GTTCTTTATCATCTCTAGCT+TGG | - | chr7.4:125258-125277 | None:intergenic | 35.0% | |
| TACTGTGCAATCCATAAAGA+AGG | - | chr7.4:123577-123596 | None:intergenic | 35.0% | |
| TAGTCTATACAAAGGTTGCA+GGG | + | chr7.4:124644-124663 | MS.gene58480:intron | 35.0% | |
| TATTAGAGAAGACTGAGCAA+TGG | - | chr7.4:125692-125711 | None:intergenic | 35.0% | |
| TTGTAATTGCTAACGGAAAC+AGG | + | chr7.4:124293-124312 | MS.gene58480:intron | 35.0% | |
| TTTGGCACAACAAAACATCA+GGG | - | chr7.4:124358-124377 | None:intergenic | 35.0% | |
| ! | AATTTTCCTTCTCTGTTCAG+GGG | - | chr7.4:123861-123880 | None:intergenic | 35.0% |
| ! | ACCAAGTAGTTTGAGTTTGA+GGG | + | chr7.4:123319-123338 | MS.gene58480:intron | 35.0% |
| ! | AGTACTTTGACAACTTTTCC+AGG | - | chr7.4:124893-124912 | None:intergenic | 35.0% |
| ! | CAATTTTCCTTCTCTGTTCA+GGG | - | chr7.4:123862-123881 | None:intergenic | 35.0% |
| ! | CCATTTTCTATATAGGGCAA+CGG | - | chr7.4:124763-124782 | None:intergenic | 35.0% |
| ! | CTTGCAAGTTTCTTTTCTGT+AGG | + | chr7.4:124934-124953 | MS.gene58480:intron | 35.0% |
| ! | TACCAAGTAGTTTGAGTTTG+AGG | + | chr7.4:123318-123337 | MS.gene58480:intron | 35.0% |
| ! | TCATTGCGAAAGGATTTGTT+AGG | - | chr7.4:123425-123444 | None:intergenic | 35.0% |
| ! | TTTCTTTTTCTCAGCTGGAT+CGG | - | chr7.4:125203-125222 | None:intergenic | 35.0% |
| ! | TTTGGTACTTTTCTCTCTTC+AGG | + | chr7.4:124983-125002 | MS.gene58480:intron | 35.0% |
| !! | TGCAAAGTTTCTGGTGAAAT+AGG | - | chr7.4:123087-123106 | None:intergenic | 35.0% |
| !! | TTTCCCTTTGCTGATTTGAT+GGG | - | chr7.4:126032-126051 | None:intergenic | 35.0% |
| !!! | ACCCACTTTTTAGTTGCAAT+AGG | - | chr7.4:126129-126148 | None:intergenic | 35.0% |
| !!! | CCACTTTTTAGTTGCAATAG+GGG | - | chr7.4:126127-126146 | None:intergenic | 35.0% |
| !!! | CCCACTTTTTAGTTGCAATA+GGG | - | chr7.4:126128-126147 | None:intergenic | 35.0% |
| AAGAAAATCCCCTGCCTATA+AGG | + | chr7.4:125217-125236 | MS.gene58480:CDS | 40.0% | |
| AAGAAAGGAAACAAATGGCG+AGG | + | chr7.4:123807-123826 | MS.gene58480:CDS | 40.0% | |
| AATCCTTTCGCAATGAATGC+AGG | + | chr7.4:123429-123448 | MS.gene58480:intron | 40.0% | |
| ACAATGAGGACATGCAACAA+TGG | + | chr7.4:123211-123230 | MS.gene58480:intron | 40.0% | |
| AGAAAGGAAACAAATGGCGA+GGG | + | chr7.4:123808-123827 | MS.gene58480:CDS | 40.0% | |
| AGCTTCAGCTATAAGCTTTC+TGG | - | chr7.4:125719-125738 | None:intergenic | 40.0% | |
| AGGAGATTGTATGGGGTAAA+AGG | - | chr7.4:123557-123576 | None:intergenic | 40.0% | |
| AGTCTATACAAAGGTTGCAG+GGG | + | chr7.4:124645-124664 | MS.gene58480:intron | 40.0% | |
| ATGTTGTGCGTCCATTTACT+TGG | - | chr7.4:125867-125886 | None:intergenic | 40.0% | |
| CAGAAACTTTGCAGAAGATC+AGG | + | chr7.4:123094-123113 | MS.gene58480:intron | 40.0% | |
| CAGAAGCTATTGCTGCAAAA+TGG | + | chr7.4:123882-123901 | MS.gene58480:CDS | 40.0% | |
| CCCCTATTGCAACTAAAAAG+TGG | + | chr7.4:126124-126143 | MS.gene58480:CDS | 40.0% | |
| CCGTTGCCCTATATAGAAAA+TGG | + | chr7.4:124760-124779 | MS.gene58480:intron | 40.0% | |
| CTAGAAACACATGCAGTTTC+AGG | + | chr7.4:124082-124101 | MS.gene58480:intron | 40.0% | |
| CTGAAAGGAAACCTAGAACA+AGG | + | chr7.4:125081-125100 | MS.gene58480:CDS | 40.0% | |
| CTGATCTTCTGCAAAGTTTC+TGG | - | chr7.4:123096-123115 | None:intergenic | 40.0% | |
| CTGGATTCTCTTGCTTCTAA+AGG | + | chr7.4:124108-124127 | MS.gene58480:intron | 40.0% | |
| CTGTTCATCCAAGGTTTCAT+AGG | - | chr7.4:123759-123778 | None:intergenic | 40.0% | |
| GAGAGTTGTGCACTATAACT+GGG | - | chr7.4:125107-125126 | None:intergenic | 40.0% | |
| GGAGATTGTATGGGGTAAAA+GGG | - | chr7.4:123556-123575 | None:intergenic | 40.0% | |
| TCAGAAATGGCCCAAGTAAA+TGG | + | chr7.4:125853-125872 | MS.gene58480:CDS | 40.0% | |
| TCAGAGAACTTGTAGAAGCT+TGG | - | chr7.4:125895-125914 | None:intergenic | 40.0% | |
| TGAGAAAGCTATGGGAAATG+AGG | + | chr7.4:123627-123646 | MS.gene58480:CDS | 40.0% | |
| TGATGAAGCATAATCGGATG+AGG | - | chr7.4:122858-122877 | None:intergenic | 40.0% | |
| TGCTTACATGACATCACCTT+AGG | - | chr7.4:123147-123166 | None:intergenic | 40.0% | |
| TGCTTTCTTCCTTTGTTCCA+TGG | - | chr7.4:122969-122988 | None:intergenic | 40.0% | |
| TGTTGTGCGTCCATTTACTT+GGG | - | chr7.4:125866-125885 | None:intergenic | 40.0% | |
| TTACTTGGGCCATTTCTGAA+TGG | - | chr7.4:125852-125871 | None:intergenic | 40.0% | |
| TTGTATGGCTTGAGTTTGTC+TGG | - | chr7.4:125309-125328 | None:intergenic | 40.0% | |
| ! | AAGAAGCACATCCATTGGTT+AGG | - | chr7.4:125972-125991 | None:intergenic | 40.0% |
| ! | AGGTAAAGAAGCACATCCAT+TGG | - | chr7.4:125977-125996 | None:intergenic | 40.0% |
| ! | CAAGTAGTTTGAGTTTGAGG+GGG | + | chr7.4:123321-123340 | MS.gene58480:intron | 40.0% |
| ! | CCAAGTAGTTTGAGTTTGAG+GGG | + | chr7.4:123320-123339 | MS.gene58480:intron | 40.0% |
| ! | CTTTTCCAGGTACAACACTT+TGG | - | chr7.4:124880-124899 | None:intergenic | 40.0% |
| ! | GCAATTTTCCTTCTCTGTTC+AGG | - | chr7.4:123863-123882 | None:intergenic | 40.0% |
| ! | GGGATTTTCTTTTTCTCAGC+TGG | - | chr7.4:125208-125227 | None:intergenic | 40.0% |
| ! | TCTAGCTTGGAATTCACCAA+AGG | - | chr7.4:125245-125264 | None:intergenic | 40.0% |
| !! | AGATTTTGGTGAACTTTCCC+TGG | + | chr7.4:125915-125934 | MS.gene58480:CDS | 40.0% |
| !! | CTATAAAAGAGAGGAGTGCT+AGG | - | chr7.4:124627-124646 | None:intergenic | 40.0% |
| !! | CTGGATCGGCTTAACAATTT+TGG | - | chr7.4:125189-125208 | None:intergenic | 40.0% |
| !! | GATCGGCTTAACAATTTTGG+AGG | - | chr7.4:125186-125205 | None:intergenic | 40.0% |
| !! | GTTTCCCTTTGCTGATTTGA+TGG | - | chr7.4:126033-126052 | None:intergenic | 40.0% |
| !!! | TAGGGTTGTTTCTCCCTTTT+TGG | + | chr7.4:124965-124984 | MS.gene58480:intron | 40.0% |
| !!! | TTTTGCCAAAGTGTTGTACC+TGG | + | chr7.4:124872-124891 | MS.gene58480:intron | 40.0% |
| AACTTCTCGCTCTCATCAAG+TGG | - | chr7.4:122906-122925 | None:intergenic | 45.0% | |
| ACCAAAGGATCCTTATAGGC+AGG | - | chr7.4:125230-125249 | None:intergenic | 45.0% | |
| ACTGCCCATCAAATCAGCAA+AGG | + | chr7.4:126025-126044 | MS.gene58480:CDS | 45.0% | |
| AGATGACTGTAGTGTCCCTT+CGG | + | chr7.4:125774-125793 | MS.gene58480:CDS | 45.0% | |
| AGTGCGGTCAGAATAGTCAA+AGG | + | chr7.4:124676-124695 | MS.gene58480:intron | 45.0% | |
| ATGAACAGCTTAAGCAGGAG+TGG | + | chr7.4:123771-123790 | MS.gene58480:CDS | 45.0% | |
| ATGGGCAGTCTTGGTTTATC+TGG | - | chr7.4:126014-126033 | None:intergenic | 45.0% | |
| CAAAGGATCCTTATAGGCAG+GGG | - | chr7.4:125228-125247 | None:intergenic | 45.0% | |
| CCAAAGGATCCTTATAGGCA+GGG | - | chr7.4:125229-125248 | None:intergenic | 45.0% | |
| CCAGAACTTCACCTAACCAA+TGG | + | chr7.4:125958-125977 | MS.gene58480:CDS | 45.0% | |
| CCCCTCAAACTCAAACTACT+TGG | - | chr7.4:123323-123342 | None:intergenic | 45.0% | |
| CTAGGCATTTATTGGAAGGC+AGG | - | chr7.4:124548-124567 | None:intergenic | 45.0% | |
| CTCAAGCCATACAACAAGCA+AGG | + | chr7.4:125315-125334 | MS.gene58480:CDS | 45.0% | |
| CTGCCCATCAAATCAGCAAA+GGG | + | chr7.4:126026-126045 | MS.gene58480:CDS | 45.0% | |
| CTGCTTAAGCTGTTCATCCA+AGG | - | chr7.4:123768-123787 | None:intergenic | 45.0% | |
| CTTGGATGAACAGCTTAAGC+AGG | + | chr7.4:123766-123785 | MS.gene58480:CDS | 45.0% | |
| GATTGCTGAAGCTGAGAAAG+CGG | + | chr7.4:125633-125652 | MS.gene58480:CDS | 45.0% | |
| GGAAACACTCCATGGAACAA+AGG | + | chr7.4:122957-122976 | MS.gene58480:CDS | 45.0% | |
| GGAGAGTTGTGCACTATAAC+TGG | - | chr7.4:125108-125127 | None:intergenic | 45.0% | |
| GTCTATACAAAGGTTGCAGG+GGG | + | chr7.4:124646-124665 | MS.gene58480:intron | 45.0% | |
| TAGTTTGAGCGAGGTCAATC+AGG | + | chr7.4:125798-125817 | MS.gene58480:CDS | 45.0% | |
| TCAAAGTCCACAGACAAGGA+TGG | - | chr7.4:124806-124825 | None:intergenic | 45.0% | |
| TCAGCAAAGGGAAACAGAAC+AGG | + | chr7.4:126038-126057 | MS.gene58480:CDS | 45.0% | |
| TGACCTGCATTCATTGCGAA+AGG | - | chr7.4:123435-123454 | None:intergenic | 45.0% | |
| TGCTGGAGTGAGAAAGCTAT+GGG | + | chr7.4:123619-123638 | MS.gene58480:CDS | 45.0% | |
| TGTGTTTCCATCCTTGTCTG+TGG | + | chr7.4:124796-124815 | MS.gene58480:intron | 45.0% | |
| TTGAGTTTGTCTGGTATCCG+CGG | - | chr7.4:125300-125319 | None:intergenic | 45.0% | |
| TTGCAGAGCAGACTCTTTCA+CGG | - | chr7.4:125040-125059 | None:intergenic | 45.0% | |
| ! | AAAGGAAGAAAGCACAGTCC+CGG | + | chr7.4:122975-122994 | MS.gene58480:CDS | 45.0% |
| ! | CACATGCAGTTTCAGGTAAC+TGG | + | chr7.4:124089-124108 | MS.gene58480:intron | 45.0% |
| ! | CCATTGGTTAGGTGAAGTTC+TGG | - | chr7.4:125961-125980 | None:intergenic | 45.0% |
| ! | GCAACTAAAAAGTGGGTTCG+CGG | + | chr7.4:126132-126151 | MS.gene58480:CDS | 45.0% |
| ! | GGTTGCTCAGTGTTGAAGAA+AGG | + | chr7.4:123792-123811 | MS.gene58480:CDS | 45.0% |
| !! | AGTTCTGGAACGCCATTAAC+TGG | - | chr7.4:125946-125965 | None:intergenic | 45.0% |
| !! | ATGGTGGATGCGATGAACAT+TGG | + | chr7.4:125489-125508 | MS.gene58480:intron | 45.0% |
| !! | ATTGCAGAAGCATCTAGGCA+AGG | + | chr7.4:123701-123720 | MS.gene58480:CDS | 45.0% |
| !! | CTATAACTGGGCCTTGTTCT+AGG | - | chr7.4:125095-125114 | None:intergenic | 45.0% |
| !! | GGTCTACCTTGCTTGTTGTA+TGG | - | chr7.4:125324-125343 | None:intergenic | 45.0% |
| !! | AATTAAAATAAGTATTAAAA+TGG | - | chr7.4:125346-125365 | None:intergenic | 5.0% |
| !! | ATTAAAATAAGTATTAAAAT+GGG | - | chr7.4:125345-125364 | None:intergenic | 5.0% |
| AAGCTATGGGAAATGAGGCG+TGG | + | chr7.4:123632-123651 | MS.gene58480:CDS | 50.0% | |
| ACCTCGCTCAAACTAACCGA+AGG | - | chr7.4:125793-125812 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7.4:123041-123060 | None:intergenic | 50.0% | |
| AGCTATGGGAAATGAGGCGT+GGG | + | chr7.4:123633-123652 | MS.gene58480:CDS | 50.0% | |
| CCCTGCCTATAAGGATCCTT+TGG | + | chr7.4:125226-125245 | MS.gene58480:CDS | 50.0% | |
| CCTCGCTATGCAGAATCCTA+AGG | + | chr7.4:123128-123147 | MS.gene58480:CDS | 50.0% | |
| CCTCGCTCAAACTAACCGAA+GGG | - | chr7.4:125792-125811 | None:intergenic | 50.0% | |
| CCTTAGGATTCTGCATAGCG+AGG | - | chr7.4:123131-123150 | None:intergenic | 50.0% | |
| CTTCTCTGTTCAGGGGACTT+GGG | - | chr7.4:123854-123873 | None:intergenic | 50.0% | |
| GTGCTGGAGTGAGAAAGCTA+TGG | + | chr7.4:123618-123637 | MS.gene58480:CDS | 50.0% | |
| TATACAAAGGTTGCAGGGGG+AGG | + | chr7.4:124649-124668 | MS.gene58480:intron | 50.0% | |
| TCCCTGGAGAGACCAGTTAA+TGG | + | chr7.4:125931-125950 | MS.gene58480:CDS | 50.0% | |
| TTGGGTGCTCTGTTGCTAAC+TGG | - | chr7.4:123836-123855 | None:intergenic | 50.0% | |
| TTGGTCAGGAAGAGCTGCAA+TGG | + | chr7.4:123729-123748 | MS.gene58480:CDS | 50.0% | |
| ! | CTAAAAAGTGGGTTCGCGGA+AGG | + | chr7.4:126136-126155 | MS.gene58480:CDS | 50.0% |
| ! | GCATCTAGGCAAGGCTTTGT+TGG | + | chr7.4:123710-123729 | MS.gene58480:CDS | 50.0% |
| ! | GCCATTAACTGGTCTCTCCA+GGG | - | chr7.4:125935-125954 | None:intergenic | 50.0% |
| !! | AGGAGAGTTGCTGCTTTGAG+TGG | + | chr7.4:123669-123688 | MS.gene58480:CDS | 50.0% |
| !! | GCTGATTTGATGGGCAGTCT+TGG | - | chr7.4:126023-126042 | None:intergenic | 50.0% |
| !! | TAGGCAAGGCTTTGTTGGTC+AGG | + | chr7.4:123715-123734 | MS.gene58480:CDS | 50.0% |
| AAAGTTGGGTCAAAGGCCCG+AGG | + | chr7.4:124577-124596 | MS.gene58480:intron | 55.0% | |
| AATGAGGCGTGGGAGGAAGA+TGG | + | chr7.4:123643-123662 | MS.gene58480:CDS | 55.0% | |
| CAGAGCACAAAGAGCTTCCG+CGG | + | chr7.4:125280-125299 | MS.gene58480:CDS | 55.0% | |
| CCAAGTCCCCTGAACAGAGA+AGG | + | chr7.4:123852-123871 | MS.gene58480:CDS | 55.0% | |
| CCTTCTCTGTTCAGGGGACT+TGG | - | chr7.4:123855-123874 | None:intergenic | 55.0% | |
| TATGGGAAATGAGGCGTGGG+AGG | + | chr7.4:123636-123655 | MS.gene58480:CDS | 55.0% | |
| TGAAGCTGAGAAAGCGGCCA+AGG | + | chr7.4:125639-125658 | MS.gene58480:CDS | 55.0% | |
| ! | CGCCATTAACTGGTCTCTCC+AGG | - | chr7.4:125936-125955 | None:intergenic | 55.0% |
| !! | CCCTTCGGTTAGTTTGAGCG+AGG | + | chr7.4:125789-125808 | MS.gene58480:CDS | 55.0% |
| TGAGAAAGCGGCCAAGGCAC+TGG | + | chr7.4:125645-125664 | MS.gene58480:CDS | 60.0% | |
| TGCAGGGGGAGGATGAAGTG+CGG | + | chr7.4:124660-124679 | MS.gene58480:intron | 60.0% | |
| !! | CAAGGCACTGGAGGTTGCTG+CGG | + | chr7.4:125657-125676 | MS.gene58480:CDS | 60.0% |
| CGCAGCAACCTCCAGTGCCT+TGG | - | chr7.4:125659-125678 | None:intergenic | 65.0% | |
| GCGTGGGAGGAAGATGGTGC+AGG | + | chr7.4:123649-123668 | MS.gene58480:CDS | 65.0% | |
| !! | GAAAGCGGCCAAGGCACTGG+AGG | + | chr7.4:125648-125667 | MS.gene58480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 122801 | 126188 | 122801 | ID=MS.gene58480 |
| chr7.4 | mRNA | 122801 | 126188 | 122801 | ID=MS.gene58480.t1;Parent=MS.gene58480 |
| chr7.4 | exon | 122801 | 122996 | 122801 | ID=MS.gene58480.t1.exon1;Parent=MS.gene58480.t1 |
| chr7.4 | CDS | 122801 | 122996 | 122801 | ID=cds.MS.gene58480.t1;Parent=MS.gene58480.t1 |
| chr7.4 | exon | 123097 | 123149 | 123097 | ID=MS.gene58480.t1.exon2;Parent=MS.gene58480.t1 |
| chr7.4 | CDS | 123097 | 123149 | 123097 | ID=cds.MS.gene58480.t1;Parent=MS.gene58480.t1 |
| chr7.4 | exon | 123451 | 123488 | 123451 | ID=MS.gene58480.t1.exon3;Parent=MS.gene58480.t1 |
| chr7.4 | CDS | 123451 | 123488 | 123451 | ID=cds.MS.gene58480.t1;Parent=MS.gene58480.t1 |
| chr7.4 | exon | 123595 | 123913 | 123595 | ID=MS.gene58480.t1.exon4;Parent=MS.gene58480.t1 |
| chr7.4 | CDS | 123595 | 123913 | 123595 | ID=cds.MS.gene58480.t1;Parent=MS.gene58480.t1 |
| chr7.4 | exon | 125032 | 125336 | 125032 | ID=MS.gene58480.t1.exon5;Parent=MS.gene58480.t1 |
| chr7.4 | CDS | 125032 | 125336 | 125032 | ID=cds.MS.gene58480.t1;Parent=MS.gene58480.t1 |
| chr7.4 | exon | 125627 | 126188 | 125627 | ID=MS.gene58480.t1.exon6;Parent=MS.gene58480.t1 |
| chr7.4 | CDS | 125627 | 126188 | 125627 | ID=cds.MS.gene58480.t1;Parent=MS.gene58480.t1 |
| Gene Sequence |
| Protein sequence |
