Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62169.t1 | AES71017.2 | 98.3 | 533 | 9 | 0 | 1 | 533 | 1 | 533 | 4.10E-307 | 1063.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62169.t1 | F4K2A1 | 61.2 | 541 | 171 | 8 | 2 | 533 | 61 | 571 | 2.5e-180 | 633.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62169.t1 | G7J9Z3 | 98.3 | 533 | 9 | 0 | 1 | 533 | 1 | 533 | 3.0e-307 | 1063.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene62169 | 0.832222 | 1.07E-55 | -1.69E-46 |
| MS.gene049151 | MS.gene62169 | 0.820411 | 6.96E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene62169 | 0.833934 | 4.01E-56 | -1.69E-46 |
| MS.gene04933 | MS.gene62169 | 0.80594 | 1.05E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene62169 | 0.841732 | 3.98E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene62169 | 0.828059 | 1.11E-54 | -1.69E-46 |
| MS.gene049426 | MS.gene62169 | 0.822804 | 1.95E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene62169 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene62169 | 0.814387 | 1.58E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene62169 | 0.816336 | 5.83E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene62169 | 0.880672 | 4.52E-70 | -1.69E-46 |
| MS.gene049910 | MS.gene62169 | 0.847566 | 1.07E-59 | -1.69E-46 |
| MS.gene049915 | MS.gene62169 | 0.812954 | 3.27E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene62169 | 0.815035 | 1.14E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene62169 | 0.809395 | 1.93E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene62169 | 0.811801 | 5.84E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene62169 | 0.800534 | 1.38E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene62169 | 0.891971 | 2.44E-74 | -1.69E-46 |
| MS.gene050397 | MS.gene62169 | 0.836805 | 7.55E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene62169 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene62169 | -0.803424 | 3.51E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene62169 | 0.815778 | 7.76E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene62169 | 0.826364 | 2.83E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene62169 | 0.840025 | 1.11E-57 | -1.69E-46 |
| MS.gene050558 | MS.gene62169 | 0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene62169 | 0.818947 | 1.50E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene62169 | 0.87598 | 2.01E-68 | -1.69E-46 |
| MS.gene050812 | MS.gene62169 | 0.822451 | 2.35E-53 | -1.69E-46 |
| MS.gene050820 | MS.gene62169 | 0.810384 | 1.18E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene62169 | 0.818743 | 1.67E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene62169 | 0.822571 | 2.21E-53 | -1.69E-46 |
| MS.gene051360 | MS.gene62169 | 0.810516 | 1.11E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene62169 | 0.830078 | 3.60E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene62169 | 0.828286 | 9.78E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene62169 | 0.856966 | 2.25E-62 | -1.69E-46 |
| MS.gene051663 | MS.gene62169 | 0.855411 | 6.43E-62 | -1.69E-46 |
| MS.gene051860 | MS.gene62169 | 0.865804 | 4.53E-65 | -1.69E-46 |
| MS.gene051877 | MS.gene62169 | 0.808343 | 3.25E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene62169 | 0.826925 | 2.08E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene62169 | -0.841083 | 5.89E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene62169 | 0.857512 | 1.55E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene62169 | 0.828003 | 1.14E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene62169 | 0.809843 | 1.55E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene62169 | 0.890476 | 9.52E-74 | -1.69E-46 |
| MS.gene052207 | MS.gene62169 | 0.83098 | 2.16E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene62169 | 0.870653 | 1.24E-66 | -1.69E-46 |
| MS.gene052255 | MS.gene62169 | 0.835312 | 1.81E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene62169 | 0.859384 | 4.29E-63 | -1.69E-46 |
| MS.gene052326 | MS.gene62169 | 0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene62169 | 0.861374 | 1.07E-63 | -1.69E-46 |
| MS.gene052485 | MS.gene62169 | 0.86864 | 5.62E-66 | -1.69E-46 |
| MS.gene05316 | MS.gene62169 | 0.804524 | 2.07E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene62169 | 0.811134 | 8.15E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene62169 | 0.835045 | 2.11E-56 | -1.69E-46 |
| MS.gene053559 | MS.gene62169 | 0.811682 | 6.20E-51 | -1.69E-46 |
| MS.gene053577 | MS.gene62169 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene62169 | 0.907997 | 2.76E-81 | -1.69E-46 |
| MS.gene053907 | MS.gene62169 | 0.801783 | 7.65E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene62169 | 0.837911 | 3.93E-57 | -1.69E-46 |
| MS.gene054010 | MS.gene62169 | 0.800766 | 1.24E-48 | -1.69E-46 |
| MS.gene054011 | MS.gene62169 | 0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene62169 | 0.864188 | 1.46E-64 | -1.69E-46 |
| MS.gene054183 | MS.gene62169 | 0.82977 | 4.27E-55 | -1.69E-46 |
| MS.gene054349 | MS.gene62169 | 0.833384 | 5.50E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene62169 | 0.839101 | 1.94E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene62169 | 0.804472 | 2.13E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene62169 | 0.810813 | 9.56E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene62169 | 0.851873 | 6.68E-61 | -1.69E-46 |
| MS.gene054719 | MS.gene62169 | 0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene62169 | 0.852359 | 4.86E-61 | -1.69E-46 |
| MS.gene054942 | MS.gene62169 | 0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene054955 | MS.gene62169 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene62169 | 0.844094 | 9.35E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene62169 | 0.855587 | 5.71E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene62169 | 0.851565 | 8.17E-61 | -1.69E-46 |
| MS.gene055369 | MS.gene62169 | 0.800875 | 1.17E-48 | -1.69E-46 |
| MS.gene055390 | MS.gene62169 | 0.864093 | 1.56E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene62169 | 0.865641 | 5.10E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene62169 | 0.849705 | 2.72E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene62169 | 0.863467 | 2.44E-64 | -1.69E-46 |
| MS.gene055604 | MS.gene62169 | 0.823334 | 1.47E-53 | -1.69E-46 |
| MS.gene055666 | MS.gene62169 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene055859 | MS.gene62169 | 0.82933 | 5.47E-55 | -1.69E-46 |
| MS.gene05594 | MS.gene62169 | 0.807628 | 4.61E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene62169 | 0.834623 | 2.69E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene62169 | 0.897327 | 1.57E-76 | -1.69E-46 |
| MS.gene056410 | MS.gene62169 | 0.813174 | 2.93E-51 | -1.69E-46 |
| MS.gene056451 | MS.gene62169 | 0.801165 | 1.02E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene62169 | 0.809951 | 1.47E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene62169 | 0.84687 | 1.65E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene62169 | 0.833002 | 6.85E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene62169 | 0.851347 | 9.42E-61 | -1.69E-46 |
| MS.gene056899 | MS.gene62169 | -0.810942 | 8.97E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene62169 | 0.813493 | 2.49E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene62169 | 0.852479 | 4.49E-61 | -1.69E-46 |
| MS.gene057121 | MS.gene62169 | 0.87618 | 1.71E-68 | -1.69E-46 |
| MS.gene057123 | MS.gene62169 | 0.807587 | 4.70E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene62169 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene62169 | 0.82863 | 8.08E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene62169 | 0.829084 | 6.27E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene62169 | 0.880905 | 3.73E-70 | -1.69E-46 |
| MS.gene057449 | MS.gene62169 | 0.848795 | 4.88E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene62169 | 0.878327 | 3.07E-69 | -1.69E-46 |
| MS.gene057469 | MS.gene62169 | 0.849264 | 3.61E-60 | -1.69E-46 |
| MS.gene057476 | MS.gene62169 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene62169 | 0.840342 | 9.21E-58 | -1.69E-46 |
| MS.gene057750 | MS.gene62169 | 0.808147 | 3.57E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene62169 | 0.845834 | 3.17E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene62169 | 0.889677 | 1.95E-73 | -1.69E-46 |
| MS.gene058007 | MS.gene62169 | 0.823159 | 1.61E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene62169 | 0.806118 | 9.61E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene62169 | 0.893239 | 7.56E-75 | -1.69E-46 |
| MS.gene058142 | MS.gene62169 | 0.836441 | 9.34E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene62169 | 0.83495 | 2.23E-56 | -1.69E-46 |
| MS.gene058276 | MS.gene62169 | 0.820021 | 8.55E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene62169 | 0.842623 | 2.31E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene62169 | 0.836355 | 9.82E-57 | -1.69E-46 |
| MS.gene05842 | MS.gene62169 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene62169 | 0.867462 | 1.34E-65 | -1.69E-46 |
| MS.gene058700 | MS.gene62169 | 0.81452 | 1.48E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene62169 | 0.843117 | 1.71E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene62169 | 0.824545 | 7.62E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene62169 | 0.822933 | 1.82E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene62169 | 0.808201 | 3.48E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene62169 | 0.832646 | 8.39E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene62169 | 0.801662 | 8.10E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene62169 | 0.911899 | 3.60E-83 | -1.69E-46 |
| MS.gene059082 | MS.gene62169 | 0.834412 | 3.04E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene62169 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene62169 | 0.83326 | 5.90E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene62169 | 0.817912 | 2.58E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene62169 | 0.870957 | 9.85E-67 | -1.69E-46 |
| MS.gene059462 | MS.gene62169 | 0.833048 | 6.67E-56 | -1.69E-46 |
| MS.gene059518 | MS.gene62169 | 0.823914 | 1.07E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene62169 | 0.866941 | 1.97E-65 | -1.69E-46 |
| MS.gene05959 | MS.gene62169 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene62169 | 0.849696 | 2.74E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene62169 | 0.88089 | 3.78E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene62169 | 0.870877 | 1.05E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene62169 | 0.876317 | 1.54E-68 | -1.69E-46 |
| MS.gene059708 | MS.gene62169 | 0.812435 | 4.25E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene62169 | 0.81333 | 2.70E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene62169 | 0.868075 | 8.55E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene62169 | 0.842908 | 1.94E-58 | -1.69E-46 |
| MS.gene06037 | MS.gene62169 | 0.835245 | 1.88E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene62169 | 0.831983 | 1.23E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene62169 | 0.825251 | 5.19E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene62169 | 0.816725 | 4.77E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene62169 | 0.820344 | 7.21E-53 | -1.69E-46 |
| MS.gene060986 | MS.gene62169 | 0.828749 | 7.56E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene62169 | 0.889724 | 1.87E-73 | -1.69E-46 |
| MS.gene061051 | MS.gene62169 | -0.851058 | 1.14E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene62169 | 0.830368 | 3.05E-55 | -1.69E-46 |
| MS.gene061159 | MS.gene62169 | 0.823359 | 1.45E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62169.t1 | MTR_3g069160 | 98.311 | 533 | 9 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1095 |
| MS.gene62169.t1 | MTR_3g069180 | 98.117 | 531 | 10 | 0 | 1 | 531 | 51 | 581 | 0.0 | 1089 |
| MS.gene62169.t1 | MTR_3g069160 | 95.273 | 550 | 9 | 1 | 1 | 533 | 51 | 600 | 0.0 | 1085 |
| MS.gene62169.t1 | MTR_5g081250 | 76.895 | 541 | 114 | 6 | 3 | 533 | 4 | 543 | 0.0 | 845 |
| MS.gene62169.t1 | MTR_3g069160 | 98.741 | 397 | 5 | 0 | 137 | 533 | 1 | 397 | 0.0 | 815 |
| MS.gene62169.t1 | MTR_5g081250 | 76.482 | 523 | 112 | 6 | 3 | 515 | 4 | 525 | 0.0 | 813 |
| MS.gene62169.t1 | MTR_1g051385 | 51.590 | 566 | 235 | 11 | 6 | 533 | 56 | 620 | 0.0 | 538 |
| MS.gene62169.t1 | MTR_1g051385 | 52.591 | 521 | 211 | 10 | 48 | 533 | 4 | 523 | 9.56e-180 | 516 |
| MS.gene62169.t1 | MTR_1g028510 | 29.363 | 361 | 197 | 10 | 58 | 375 | 84 | 429 | 3.54e-33 | 133 |
| MS.gene62169.t1 | MTR_1g028510 | 30.503 | 318 | 166 | 9 | 58 | 335 | 84 | 386 | 4.41e-30 | 122 |
| MS.gene62169.t1 | MTR_7g100940 | 26.978 | 278 | 149 | 8 | 81 | 319 | 103 | 365 | 5.15e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62169.t1 | AT5G05980 | 62.107 | 541 | 166 | 8 | 2 | 533 | 3 | 513 | 0.0 | 671 |
| MS.gene62169.t1 | AT5G05980 | 62.107 | 541 | 166 | 8 | 2 | 533 | 61 | 571 | 0.0 | 669 |
| MS.gene62169.t1 | AT3G55630 | 58.427 | 534 | 179 | 10 | 1 | 533 | 1 | 492 | 0.0 | 606 |
| MS.gene62169.t1 | AT3G55630 | 58.240 | 534 | 179 | 11 | 1 | 533 | 1 | 491 | 0.0 | 600 |
| MS.gene62169.t1 | AT3G55630 | 55.431 | 534 | 173 | 11 | 1 | 533 | 1 | 470 | 0.0 | 558 |
| MS.gene62169.t1 | AT3G55630 | 59.158 | 475 | 153 | 9 | 60 | 533 | 1 | 435 | 0.0 | 553 |
| MS.gene62169.t1 | AT3G55630 | 59.158 | 475 | 153 | 9 | 60 | 533 | 1 | 435 | 0.0 | 553 |
| MS.gene62169.t1 | AT3G55630 | 59.158 | 475 | 153 | 9 | 60 | 533 | 1 | 435 | 0.0 | 553 |
| MS.gene62169.t1 | AT3G10160 | 51.601 | 562 | 236 | 10 | 2 | 533 | 70 | 625 | 0.0 | 551 |
| MS.gene62169.t1 | AT3G55630 | 56.030 | 398 | 134 | 9 | 137 | 533 | 1 | 358 | 5.93e-147 | 426 |
| MS.gene62169.t1 | AT5G41480 | 38.095 | 168 | 102 | 1 | 50 | 215 | 84 | 251 | 6.28e-31 | 126 |
Find 112 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTAAATGGTTTAAAATT+AGG | 0.057059 | 3.2:-63067671 | MS.gene62169:CDS |
| GCACATGCTTCCATGCTTTC+AGG | 0.165417 | 3.2:+63067301 | None:intergenic |
| TCTTCATATGGCGATGATTT+TGG | 0.165761 | 3.2:+63073555 | None:intergenic |
| CGTATTATTCGAGTACTTAA+AGG | 0.189555 | 3.2:-63073457 | MS.gene62169:intron |
| TACTAAATGGTTTAAAATTA+GGG | 0.198474 | 3.2:-63067670 | MS.gene62169:CDS |
| AAACCAGTCAACTCGCTTTC+AGG | 0.213072 | 3.2:-63065323 | MS.gene62169:intron |
| CGAGAAAGATTTCGTTTAGA+TGG | 0.260770 | 3.2:-63072638 | MS.gene62169:CDS |
| ACTGGTTCCATACATCTTAT+TGG | 0.265122 | 3.2:-63065032 | MS.gene62169:CDS |
| TTAGATGCCAAATTACTAAA+TGG | 0.272407 | 3.2:-63067683 | MS.gene62169:CDS |
| TATTGGTGATGTGTTGAAAT+TGG | 0.304394 | 3.2:-63065015 | MS.gene62169:CDS |
| ATGCATCAGGTCCTTGTAAC+TGG | 0.311721 | 3.2:-63065050 | MS.gene62169:intron |
| TGAGAAGGCGGGAATCTTAA+AGG | 0.312541 | 3.2:-63069420 | MS.gene62169:intron |
| AGTTCACTCTACAAAGAGTA+TGG | 0.322540 | 3.2:-63065651 | MS.gene62169:CDS |
| TCTACATGGATGAATATAAA+TGG | 0.327429 | 3.2:-63067596 | MS.gene62169:CDS |
| TAAAGCAAGGAAGTGGAAAA+AGG | 0.337269 | 3.2:+63070286 | None:intergenic |
| CACCACTTTATTTGAGAACT+TGG | 0.339731 | 3.2:+63067213 | None:intergenic |
| CATTGCCACTGGTTATCAAT+TGG | 0.345970 | 3.2:-63065366 | MS.gene62169:CDS |
| GCTTCCAATGCTTCTTCATA+TGG | 0.369429 | 3.2:+63073543 | None:intergenic |
| TATGACCACATGGAAATTCT+TGG | 0.370689 | 3.2:-63069903 | MS.gene62169:intron |
| TGCATAATGGAGGTTGGGTT+AGG | 0.370944 | 3.2:-63070120 | MS.gene62169:CDS |
| CACTGGTTATCAATTGGCTT+AGG | 0.371537 | 3.2:-63065360 | MS.gene62169:CDS |
| ATATTTACAGAAGGAGATAA+TGG | 0.371821 | 3.2:-63073582 | MS.gene62169:intron |
| TTGAAGATTATCCATGTTGC+TGG | 0.377902 | 3.2:-63073168 | MS.gene62169:CDS |
| GATGTTTGCATAATGGAGGT+TGG | 0.388180 | 3.2:-63070126 | MS.gene62169:CDS |
| TTATCAATGTACCACAAGAT+TGG | 0.388558 | 3.2:-63065721 | MS.gene62169:CDS |
| GAAGTTATACCACACACAAT+AGG | 0.399740 | 3.2:+63069933 | None:intergenic |
| TAATAAAAGTACCTTCCCTT+TGG | 0.401887 | 3.2:+63073143 | None:intergenic |
| AGTACATCCATTGCTTCATC+AGG | 0.408417 | 3.2:+63068523 | None:intergenic |
| CTCTTCTGAAAATATCTTGA+AGG | 0.410763 | 3.2:+63070259 | None:intergenic |
| TCGTGTTGGTGATGTCAATA+TGG | 0.419030 | 3.2:-63073493 | MS.gene62169:CDS |
| GTGTGTGGTATAACTTCTCT+TGG | 0.421453 | 3.2:-63069927 | MS.gene62169:CDS |
| ACAGGTGGATGTTTGCATAA+TGG | 0.421945 | 3.2:-63070133 | MS.gene62169:intron |
| TATTTACAGAAGGAGATAAT+GGG | 0.426485 | 3.2:-63073581 | MS.gene62169:intron |
| GGTTTAAAATTAGGGCTTGA+AGG | 0.427252 | 3.2:-63067662 | MS.gene62169:CDS |
| GATGAAACAAGGTCTGGTTC+TGG | 0.433364 | 3.2:+63067251 | None:intergenic |
| CACATCACCAATAAGATGTA+TGG | 0.435776 | 3.2:+63065025 | None:intergenic |
| CAAGACCAGCATTAACATAT+TGG | 0.438258 | 3.2:+63067633 | None:intergenic |
| CTGTTGCATTATGCTCTACA+TGG | 0.446804 | 3.2:-63067610 | MS.gene62169:CDS |
| TTGCCAGAGCAGTTCATAAA+CGG | 0.451738 | 3.2:-63067430 | MS.gene62169:CDS |
| GGTTCTGGTCTTTGATTGCA+AGG | 0.458482 | 3.2:+63067266 | None:intergenic |
| ACTGGTTATCAATTGGCTTA+GGG | 0.461528 | 3.2:-63065359 | MS.gene62169:CDS |
| TTCTGAAGAATTAGCTGGTA+TGG | 0.465934 | 3.2:-63065431 | MS.gene62169:CDS |
| AAGAAGGCGCTATTTGTGCC+TGG | 0.475535 | 3.2:-63065745 | MS.gene62169:CDS |
| AATACTCTTGGAGAAATTGC+TGG | 0.484435 | 3.2:-63069443 | MS.gene62169:CDS |
| ATGTTTGCATAATGGAGGTT+GGG | 0.485602 | 3.2:-63070125 | MS.gene62169:CDS |
| GAGAAAGATTTCGTTTAGAT+GGG | 0.487035 | 3.2:-63072637 | MS.gene62169:intron |
| CAACTGCAAGTCTGCAAGGA+AGG | 0.487658 | 3.2:-63067402 | MS.gene62169:CDS |
| ATATTAACAGGGAATACTCT+TGG | 0.488965 | 3.2:-63069455 | MS.gene62169:intron |
| GATTTGGTAGATGCTTGAAT+TGG | 0.490018 | 3.2:-63073208 | MS.gene62169:intron |
| CTATCTGATGAAACAAGGTC+TGG | 0.499454 | 3.2:+63067245 | None:intergenic |
| ATGAAAACTTGTGCTGATCA+TGG | 0.502432 | 3.2:-63066710 | MS.gene62169:intron |
| TGTGTGGTATAACTTCTCTT+GGG | 0.503285 | 3.2:-63069926 | MS.gene62169:CDS |
| AAACCGTTTATGAACTGCTC+TGG | 0.505379 | 3.2:+63067427 | None:intergenic |
| TTCCAAGTTCTCAAATAAAG+TGG | 0.507300 | 3.2:-63067215 | MS.gene62169:CDS |
| TTTAGTAATTTGGCATCTAA+CGG | 0.512015 | 3.2:+63067686 | None:intergenic |
| GGTTGAGTCACTGTAAATGC+TGG | 0.513165 | 3.2:+63068544 | None:intergenic |
| TTACCTGAAAGCGAGTTGAC+TGG | 0.526726 | 3.2:+63065320 | None:intergenic |
| ATCCATGTTGCTGGTACCAA+AGG | 0.527033 | 3.2:-63073159 | MS.gene62169:CDS |
| TTAGATGAGGAGAAGTGAAA+AGG | 0.531483 | 3.2:+63072669 | None:intergenic |
| ATCGCCATATGAAGAAGCAT+TGG | 0.533099 | 3.2:-63073547 | MS.gene62169:CDS |
| GAAATTGCTGGTGAGAAGGC+GGG | 0.535726 | 3.2:-63069431 | MS.gene62169:CDS |
| AACGGAGATGTTACTTGAAG+AGG | 0.538384 | 3.2:+63067704 | None:intergenic |
| GTAGATGCTTGAATTGGAAG+AGG | 0.539812 | 3.2:-63073202 | MS.gene62169:intron |
| GTAGAGTGAACTGCCATGAC+AGG | 0.542280 | 3.2:+63065662 | None:intergenic |
| ATTACTAAACGCACTCGTGT+TGG | 0.548955 | 3.2:-63073507 | MS.gene62169:CDS |
| AACTGCAAGTCTGCAAGGAA+GGG | 0.551072 | 3.2:-63067401 | MS.gene62169:CDS |
| TGGAGAAATTGCTGGTGAGA+AGG | 0.551632 | 3.2:-63069435 | MS.gene62169:CDS |
| GGCTCATAGTCCTGAAAGCA+TGG | 0.554574 | 3.2:-63067311 | MS.gene62169:CDS |
| AAATTGAATACCTTGAGCCA+TGG | 0.556713 | 3.2:+63073707 | None:intergenic |
| GCAGCTTCTGAAGAATTAGC+TGG | 0.558289 | 3.2:-63065436 | MS.gene62169:CDS |
| AGGCAAGTAAAGCAAGGAAG+TGG | 0.560496 | 3.2:+63070279 | None:intergenic |
| GAGCACCAATATGTTAATGC+TGG | 0.560675 | 3.2:-63067638 | MS.gene62169:CDS |
| AATGGATGTACTTAAAGAGA+AGG | 0.562231 | 3.2:-63068512 | MS.gene62169:CDS |
| TCCATGTTGCTGGTACCAAA+GGG | 0.562914 | 3.2:-63073158 | MS.gene62169:CDS |
| TCAAATGAGACTCTTCAAGA+TGG | 0.563572 | 3.2:+63067573 | None:intergenic |
| GTATGGGAAAATCTCATGCA+AGG | 0.565634 | 3.2:-63065634 | MS.gene62169:CDS |
| GATGTATGGAACCAGTTACA+AGG | 0.566973 | 3.2:+63065039 | None:intergenic |
| ATAATGGAGGTTGGGTTAGG+TGG | 0.568173 | 3.2:-63070117 | MS.gene62169:CDS |
| TCCCTTTGGTACCAGCAACA+TGG | 0.570504 | 3.2:+63073157 | None:intergenic |
| ATTCTAACATTGACCTGTCA+TGG | 0.572664 | 3.2:-63065675 | MS.gene62169:CDS |
| GTGGTGTTATGATAGACTAA+AGG | 0.574335 | 3.2:-63071101 | MS.gene62169:intron |
| TTAACAACTGCAAGTCTGCA+AGG | 0.586475 | 3.2:-63067406 | MS.gene62169:CDS |
| TCCAAATTAACCATGGCTCA+AGG | 0.586683 | 3.2:-63073717 | None:intergenic |
| GACTCAACCTGATGAAGCAA+TGG | 0.590492 | 3.2:-63068530 | MS.gene62169:CDS |
| GTTCACTCTACAAAGAGTAT+GGG | 0.590549 | 3.2:-63065650 | MS.gene62169:CDS |
| TTCTCTTGGGTATGACCACA+TGG | 0.591494 | 3.2:-63069913 | MS.gene62169:CDS |
| GTTCTGGTCTTTGATTGCAA+GGG | 0.592376 | 3.2:+63067267 | None:intergenic |
| AATCTCATGCAAGGGAACAA+AGG | 0.592939 | 3.2:-63065625 | MS.gene62169:intron |
| CAAATACGATGCAACAAATG+TGG | 0.602729 | 3.2:-63070094 | MS.gene62169:intron |
| AGAAATTGCTGGTGAGAAGG+CGG | 0.607678 | 3.2:-63069432 | MS.gene62169:CDS |
| TGCAGGTGTCTACTTCAAGA+AGG | 0.608904 | 3.2:-63065761 | MS.gene62169:intron |
| TCTTGAAGGCAAGTAAAGCA+AGG | 0.621402 | 3.2:+63070273 | None:intergenic |
| TCTCGTATATCAATTAGATG+AGG | 0.624514 | 3.2:+63072656 | None:intergenic |
| TATGGGAAAATCTCATGCAA+GGG | 0.625677 | 3.2:-63065633 | MS.gene62169:CDS |
| ATCAGCTATCTGATGAAACA+AGG | 0.631446 | 3.2:+63067240 | None:intergenic |
| ATTGATAACCAGTGGCAATG+AGG | 0.637607 | 3.2:+63065369 | None:intergenic |
| GCATGGAAGCATGTGCGAAG+TGG | 0.640363 | 3.2:-63067294 | MS.gene62169:CDS |
| AGGTCAATGTTAGAATCACT+TGG | 0.645779 | 3.2:+63065682 | None:intergenic |
| TTTAGTAATCAAAGATGACA+AGG | 0.654793 | 3.2:+63073521 | None:intergenic |
| AAGCATGAGATCCAATCTTG+TGG | 0.655306 | 3.2:+63065710 | None:intergenic |
| TGTTGCTGGTACCAAAGGGA+AGG | 0.657751 | 3.2:-63073154 | MS.gene62169:intron |
| GAATCTATATTACGCAACTG+TGG | 0.657927 | 3.2:-63072704 | MS.gene62169:CDS |
| GCGTAATATAGATTCTGCGA+AGG | 0.659957 | 3.2:+63072712 | None:intergenic |
| CTAAGCCAATTGATAACCAG+TGG | 0.666215 | 3.2:+63065361 | None:intergenic |
| TTGTGGTACATTGATAAACC+AGG | 0.673003 | 3.2:+63065727 | None:intergenic |
| AAAGTGGTGAAGACGCACCA+AGG | 0.676464 | 3.2:-63067199 | MS.gene62169:CDS |
| GGTGGATGTTTGCATAATGG+AGG | 0.684054 | 3.2:-63070130 | MS.gene62169:CDS |
| AAGTGAGGAAGAAGTAACTG+AGG | 0.686138 | 3.2:+63066734 | None:intergenic |
| TGTTGGTGATGTCAATATGG+AGG | 0.724403 | 3.2:-63073490 | MS.gene62169:CDS |
| GTGCAGAAACCTATTGTGTG+TGG | 0.729317 | 3.2:-63069942 | MS.gene62169:CDS |
| TTAAGTACTCGAATAATACG+AGG | 0.762089 | 3.2:+63073460 | None:intergenic |
| ACTAACCAAGAATTTCCATG+TGG | 0.790649 | 3.2:+63069898 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 63065004 | 63073727 | 63065004 | ID=MS.gene62169 |
| chr3.2 | mRNA | 63065004 | 63073727 | 63065004 | ID=MS.gene62169.t1;Parent=MS.gene62169 |
| chr3.2 | exon | 63073718 | 63073727 | 63073718 | ID=MS.gene62169.t1.exon1;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63073718 | 63073727 | 63073718 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63073458 | 63073594 | 63073458 | ID=MS.gene62169.t1.exon2;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63073458 | 63073594 | 63073458 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63073155 | 63073220 | 63073155 | ID=MS.gene62169.t1.exon3;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63073155 | 63073220 | 63073155 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63072638 | 63072747 | 63072638 | ID=MS.gene62169.t1.exon4;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63072638 | 63072747 | 63072638 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63071102 | 63071162 | 63071102 | ID=MS.gene62169.t1.exon5;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63071102 | 63071162 | 63071102 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63070256 | 63070339 | 63070256 | ID=MS.gene62169.t1.exon6;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63070256 | 63070339 | 63070256 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63070095 | 63070151 | 63070095 | ID=MS.gene62169.t1.exon7;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63070095 | 63070151 | 63070095 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63069904 | 63069964 | 63069904 | ID=MS.gene62169.t1.exon8;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63069904 | 63069964 | 63069904 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63069421 | 63069467 | 63069421 | ID=MS.gene62169.t1.exon9;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63069421 | 63069467 | 63069421 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63068498 | 63068575 | 63068498 | ID=MS.gene62169.t1.exon10;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63068498 | 63068575 | 63068498 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63067565 | 63067729 | 63067565 | ID=MS.gene62169.t1.exon11;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63067565 | 63067729 | 63067565 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63067177 | 63067461 | 63067177 | ID=MS.gene62169.t1.exon12;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63067177 | 63067461 | 63067177 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63066711 | 63066789 | 63066711 | ID=MS.gene62169.t1.exon13;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63066711 | 63066789 | 63066711 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63065626 | 63065778 | 63065626 | ID=MS.gene62169.t1.exon14;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63065626 | 63065778 | 63065626 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63065324 | 63065472 | 63065324 | ID=MS.gene62169.t1.exon15;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63065324 | 63065472 | 63065324 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| chr3.2 | exon | 63065004 | 63065063 | 63065004 | ID=MS.gene62169.t1.exon16;Parent=MS.gene62169.t1 |
| chr3.2 | CDS | 63065004 | 63065063 | 63065004 | ID=cds.MS.gene62169.t1;Parent=MS.gene62169.t1 |
| Gene Sequence |
| Protein sequence |
