Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062853.t1 | XP_013464342.1 | 97.3 | 219 | 6 | 0 | 1 | 219 | 1 | 219 | 3.10E-120 | 441 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062853.t1 | P46417 | 78.7 | 216 | 46 | 0 | 1 | 216 | 1 | 216 | 1.5e-99 | 363.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062853.t1 | A0A072V9B8 | 97.3 | 219 | 6 | 0 | 1 | 219 | 1 | 219 | 2.3e-120 | 441.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene062853 | 0.814993 | 1.16E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene062853 | 0.819332 | 1.23E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene062853 | 0.800706 | 1.27E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene062853 | 0.879613 | 1.08E-69 | -1.69E-46 |
| MS.gene049351 | MS.gene062853 | 0.838112 | 3.49E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene062853 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene062853 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene062853 | 0.837923 | 3.90E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene062853 | 0.845308 | 4.40E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene062853 | 0.889251 | 2.86E-73 | -1.69E-46 |
| MS.gene049910 | MS.gene062853 | 0.871561 | 6.22E-67 | -1.69E-46 |
| MS.gene049915 | MS.gene062853 | 0.81216 | 4.87E-51 | -1.69E-46 |
| MS.gene049993 | MS.gene062853 | 0.82757 | 1.45E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene062853 | 0.812942 | 3.29E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene062853 | 0.818952 | 1.50E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene062853 | 0.889853 | 1.67E-73 | -1.69E-46 |
| MS.gene050330 | MS.gene062853 | -0.801057 | 1.08E-48 | -1.69E-46 |
| MS.gene050397 | MS.gene062853 | 0.863383 | 2.59E-64 | -1.69E-46 |
| MS.gene050406 | MS.gene062853 | 0.831969 | 1.24E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene062853 | -0.807074 | 6.04E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene062853 | 0.817321 | 3.50E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene062853 | 0.864232 | 1.41E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene062853 | 0.84601 | 2.84E-59 | -1.69E-46 |
| MS.gene050558 | MS.gene062853 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene062853 | 0.813727 | 2.21E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene062853 | 0.811492 | 6.81E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene062853 | 0.865574 | 5.35E-65 | -1.69E-46 |
| MS.gene05101 | MS.gene062853 | 0.85016 | 2.03E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene062853 | 0.821076 | 4.89E-53 | -1.69E-46 |
| MS.gene05119 | MS.gene062853 | -0.823631 | 1.25E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene062853 | 0.850322 | 1.83E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene062853 | 0.836713 | 7.97E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene062853 | 0.884826 | 1.38E-71 | -1.69E-46 |
| MS.gene051663 | MS.gene062853 | 0.822776 | 1.98E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene062853 | 0.85598 | 4.38E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene062853 | 0.842166 | 3.05E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene062853 | -0.862991 | 3.42E-64 | -1.69E-46 |
| MS.gene052077 | MS.gene062853 | 0.857219 | 1.89E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene062853 | 0.832544 | 8.90E-56 | -1.69E-46 |
| MS.gene052178 | MS.gene062853 | 0.826505 | 2.62E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene062853 | 0.844399 | 7.74E-59 | -1.69E-46 |
| MS.gene052207 | MS.gene062853 | 0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene062853 | 0.866853 | 2.10E-65 | -1.69E-46 |
| MS.gene052310 | MS.gene062853 | 0.851467 | 8.71E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene062853 | 0.810088 | 1.37E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene062853 | 0.858075 | 1.06E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene062853 | 0.811686 | 6.18E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene062853 | 0.829489 | 5.00E-55 | -1.69E-46 |
| MS.gene053073 | MS.gene062853 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene053184 | MS.gene062853 | 0.812477 | 4.16E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene062853 | 0.844039 | 9.68E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene062853 | 0.84055 | 8.13E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene062853 | 0.905123 | 5.98E-80 | -1.69E-46 |
| MS.gene053907 | MS.gene062853 | 0.832966 | 6.99E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene062853 | 0.85815 | 1.00E-62 | -1.69E-46 |
| MS.gene053971 | MS.gene062853 | 0.830043 | 3.67E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene062853 | 0.81992 | 9.01E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene062853 | 0.845449 | 4.03E-59 | -1.69E-46 |
| MS.gene054012 | MS.gene062853 | 0.828243 | 1.00E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene062853 | 0.828731 | 7.64E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene062853 | 0.82807 | 1.10E-54 | -1.69E-46 |
| MS.gene05412 | MS.gene062853 | 0.804511 | 2.09E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene062853 | 0.854681 | 1.05E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene062853 | 0.828924 | 6.86E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene062853 | 0.864984 | 8.21E-65 | -1.69E-46 |
| MS.gene054542 | MS.gene062853 | 0.810766 | 9.79E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene062853 | 0.816115 | 6.53E-52 | -1.69E-46 |
| MS.gene054618 | MS.gene062853 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene054719 | MS.gene062853 | 0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene062853 | 0.822388 | 2.43E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene062853 | 0.838076 | 3.56E-57 | -1.69E-46 |
| MS.gene054942 | MS.gene062853 | 0.808057 | 3.73E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene062853 | 0.856475 | 3.14E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene062853 | 0.882372 | 1.10E-70 | -1.69E-46 |
| MS.gene055277 | MS.gene062853 | 0.883346 | 4.85E-71 | -1.69E-46 |
| MS.gene055369 | MS.gene062853 | 0.826884 | 2.12E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene062853 | 0.83965 | 1.40E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene062853 | 0.868637 | 5.63E-66 | -1.69E-46 |
| MS.gene055428 | MS.gene062853 | 0.8685 | 6.23E-66 | -1.69E-46 |
| MS.gene05553 | MS.gene062853 | 0.869577 | 2.79E-66 | -1.69E-46 |
| MS.gene055564 | MS.gene062853 | 0.818403 | 2.00E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene062853 | 0.8518 | 7.01E-61 | -1.69E-46 |
| MS.gene055712 | MS.gene062853 | 0.855652 | 5.46E-62 | -1.69E-46 |
| MS.gene055859 | MS.gene062853 | 0.810529 | 1.10E-50 | -1.69E-46 |
| MS.gene05594 | MS.gene062853 | 0.803424 | 3.51E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene062853 | 0.856753 | 2.60E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene062853 | 0.871362 | 7.24E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene062853 | 0.808019 | 3.80E-50 | -1.69E-46 |
| MS.gene056451 | MS.gene062853 | 0.818046 | 2.40E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene062853 | 0.872616 | 2.77E-67 | -1.69E-46 |
| MS.gene056659 | MS.gene062853 | 0.814074 | 1.85E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene062853 | 0.841499 | 4.58E-58 | -1.69E-46 |
| MS.gene056846 | MS.gene062853 | 0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene056899 | MS.gene062853 | -0.834651 | 2.65E-56 | -1.69E-46 |
| MS.gene056902 | MS.gene062853 | 0.811493 | 6.81E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene062853 | 0.84105 | 6.01E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene062853 | 0.886927 | 2.23E-72 | -1.69E-46 |
| MS.gene057121 | MS.gene062853 | 0.858991 | 5.63E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene062853 | 0.820145 | 8.01E-53 | -1.69E-46 |
| MS.gene057245 | MS.gene062853 | 0.859259 | 4.68E-63 | -1.69E-46 |
| MS.gene05733 | MS.gene062853 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene062853 | 0.831071 | 2.05E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene062853 | 0.821197 | 4.59E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene062853 | 0.839116 | 1.92E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene062853 | 0.831933 | 1.26E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene062853 | 0.844498 | 7.29E-59 | -1.69E-46 |
| MS.gene057469 | MS.gene062853 | 0.82807 | 1.10E-54 | -1.69E-46 |
| MS.gene057476 | MS.gene062853 | 0.81522 | 1.03E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene062853 | 0.818903 | 1.54E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene062853 | 0.80117 | 1.02E-48 | -1.69E-46 |
| MS.gene057782 | MS.gene062853 | 0.807998 | 3.84E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene062853 | 0.810068 | 1.39E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene062853 | 0.88168 | 1.96E-70 | -1.69E-46 |
| MS.gene05811 | MS.gene062853 | 0.869707 | 2.53E-66 | -1.69E-46 |
| MS.gene058142 | MS.gene062853 | 0.847279 | 1.28E-59 | -1.69E-46 |
| MS.gene058233 | MS.gene062853 | 0.859641 | 3.59E-63 | -1.69E-46 |
| MS.gene058236 | MS.gene062853 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene062853 | 0.822995 | 1.76E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene062853 | 0.836197 | 1.08E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene062853 | 0.812911 | 3.34E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene062853 | 0.818356 | 2.05E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene062853 | 0.853396 | 2.46E-61 | -1.69E-46 |
| MS.gene058710 | MS.gene062853 | 0.817386 | 3.39E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene062853 | 0.824649 | 7.20E-54 | -1.69E-46 |
| MS.gene058787 | MS.gene062853 | 0.8136 | 2.36E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene062853 | 0.839225 | 1.80E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene062853 | 0.847725 | 9.64E-60 | -1.69E-46 |
| MS.gene058928 | MS.gene062853 | 0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene062853 | 0.815924 | 7.21E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene062853 | 0.898138 | 7.11E-77 | -1.69E-46 |
| MS.gene059082 | MS.gene062853 | 0.812402 | 4.32E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene062853 | 0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene062853 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene062853 | 0.823566 | 1.29E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene062853 | 0.874953 | 4.51E-68 | -1.69E-46 |
| MS.gene059462 | MS.gene062853 | 0.827642 | 1.40E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene062853 | 0.843926 | 1.04E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene062853 | 0.827706 | 1.35E-54 | -1.69E-46 |
| MS.gene05959 | MS.gene062853 | 0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene062853 | 0.829735 | 4.36E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene062853 | 0.870911 | 1.02E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene062853 | 0.869378 | 3.24E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene062853 | 0.870028 | 1.99E-66 | -1.69E-46 |
| MS.gene05984 | MS.gene062853 | 0.858021 | 1.10E-62 | -1.69E-46 |
| MS.gene059876 | MS.gene062853 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene062853 | 0.867847 | 1.01E-65 | -1.69E-46 |
| MS.gene06037 | MS.gene062853 | 0.878723 | 2.23E-69 | -1.69E-46 |
| MS.gene060403 | MS.gene062853 | 0.83502 | 2.14E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene062853 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene060476 | MS.gene062853 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene060495 | MS.gene062853 | 0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene062853 | 0.916199 | 2.37E-85 | -1.69E-46 |
| MS.gene061051 | MS.gene062853 | -0.822689 | 2.07E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene062853 | 0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene061159 | MS.gene062853 | 0.845602 | 3.67E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062853.t1 | MTR_2g070060 | 97.260 | 219 | 6 | 0 | 1 | 219 | 1 | 219 | 9.72e-161 | 443 |
| MS.gene062853.t1 | MTR_2g070070 | 86.301 | 219 | 30 | 0 | 1 | 219 | 1 | 219 | 1.37e-135 | 379 |
| MS.gene062853.t1 | MTR_2g070110 | 84.018 | 219 | 34 | 1 | 1 | 219 | 1 | 218 | 3.50e-132 | 370 |
| MS.gene062853.t1 | MTR_2g070180 | 64.186 | 215 | 77 | 0 | 1 | 215 | 1 | 215 | 2.53e-108 | 310 |
| MS.gene062853.t1 | MTR_2g070150 | 66.176 | 204 | 69 | 0 | 1 | 204 | 1 | 204 | 3.68e-105 | 301 |
| MS.gene062853.t1 | MTR_2g070140 | 65.025 | 203 | 71 | 0 | 17 | 219 | 1 | 203 | 4.50e-103 | 296 |
| MS.gene062853.t1 | MTR_2g070130 | 60.731 | 219 | 86 | 0 | 1 | 219 | 1 | 219 | 4.70e-102 | 294 |
| MS.gene062853.t1 | MTR_8g056940 | 63.927 | 219 | 79 | 0 | 1 | 219 | 1 | 219 | 7.94e-102 | 294 |
| MS.gene062853.t1 | MTR_2g070210 | 59.276 | 221 | 88 | 1 | 1 | 219 | 1 | 221 | 1.35e-97 | 283 |
| MS.gene062853.t1 | MTR_2g070200 | 59.545 | 220 | 87 | 2 | 1 | 218 | 1 | 220 | 2.79e-95 | 277 |
| MS.gene062853.t1 | MTR_3g467420 | 58.140 | 215 | 90 | 0 | 5 | 219 | 10 | 224 | 4.09e-94 | 275 |
| MS.gene062853.t1 | MTR_4g124130 | 58.636 | 220 | 90 | 1 | 1 | 219 | 1 | 220 | 5.53e-92 | 269 |
| MS.gene062853.t1 | MTR_3g467430 | 56.132 | 212 | 93 | 0 | 3 | 214 | 8 | 219 | 1.57e-89 | 263 |
| MS.gene062853.t1 | MTR_2g070120 | 53.589 | 209 | 97 | 0 | 1 | 209 | 1 | 209 | 1.51e-81 | 243 |
| MS.gene062853.t1 | MTR_5g076900 | 49.315 | 219 | 109 | 2 | 2 | 219 | 4 | 221 | 1.34e-73 | 222 |
| MS.gene062853.t1 | MTR_0186s0030 | 65.957 | 141 | 48 | 0 | 1 | 141 | 1 | 141 | 1.05e-62 | 192 |
| MS.gene062853.t1 | MTR_5g040430 | 35.874 | 223 | 133 | 3 | 2 | 217 | 5 | 224 | 4.56e-49 | 160 |
| MS.gene062853.t1 | MTR_5g037380 | 40.359 | 223 | 124 | 4 | 3 | 216 | 4 | 226 | 5.50e-48 | 157 |
| MS.gene062853.t1 | MTR_1g090060 | 40.476 | 210 | 120 | 3 | 4 | 209 | 3 | 211 | 5.34e-44 | 147 |
| MS.gene062853.t1 | MTR_2g072120 | 91.549 | 71 | 6 | 0 | 47 | 117 | 1 | 71 | 1.28e-43 | 141 |
| MS.gene062853.t1 | MTR_8g087425 | 38.647 | 207 | 122 | 4 | 2 | 205 | 3 | 207 | 3.19e-43 | 145 |
| MS.gene062853.t1 | MTR_4g019780 | 38.462 | 208 | 123 | 4 | 4 | 208 | 8 | 213 | 8.86e-43 | 144 |
| MS.gene062853.t1 | MTR_4g019790 | 40.284 | 211 | 121 | 4 | 4 | 211 | 7 | 215 | 3.20e-42 | 142 |
| MS.gene062853.t1 | MTR_8g087410 | 38.835 | 206 | 120 | 5 | 1 | 202 | 2 | 205 | 2.89e-41 | 140 |
| MS.gene062853.t1 | MTR_7g065720 | 36.792 | 212 | 122 | 5 | 4 | 208 | 7 | 213 | 2.31e-40 | 137 |
| MS.gene062853.t1 | MTR_3g099757 | 37.500 | 216 | 132 | 3 | 3 | 216 | 4 | 218 | 2.83e-40 | 137 |
| MS.gene062853.t1 | MTR_7g065660 | 38.164 | 207 | 123 | 4 | 5 | 208 | 8 | 212 | 6.71e-40 | 136 |
| MS.gene062853.t1 | MTR_4g059730 | 37.963 | 216 | 123 | 5 | 1 | 209 | 1 | 212 | 8.81e-40 | 136 |
| MS.gene062853.t1 | MTR_1g090070 | 38.009 | 221 | 128 | 6 | 4 | 217 | 9 | 227 | 1.31e-39 | 136 |
| MS.gene062853.t1 | MTR_6g080440 | 36.842 | 209 | 127 | 4 | 3 | 208 | 2 | 208 | 2.66e-39 | 135 |
| MS.gene062853.t1 | MTR_1g090100 | 41.089 | 202 | 114 | 3 | 11 | 208 | 9 | 209 | 2.78e-39 | 135 |
| MS.gene062853.t1 | MTR_7g065750 | 38.739 | 222 | 123 | 6 | 4 | 214 | 7 | 226 | 4.39e-39 | 134 |
| MS.gene062853.t1 | MTR_7g065630 | 37.981 | 208 | 118 | 6 | 4 | 206 | 25 | 226 | 1.02e-38 | 134 |
| MS.gene062853.t1 | MTR_8g061950 | 36.321 | 212 | 126 | 3 | 3 | 205 | 4 | 215 | 1.67e-38 | 133 |
| MS.gene062853.t1 | MTR_7g065590 | 37.500 | 208 | 125 | 4 | 4 | 208 | 7 | 212 | 8.93e-38 | 131 |
| MS.gene062853.t1 | MTR_7g065710 | 35.545 | 211 | 127 | 5 | 1 | 208 | 1 | 205 | 7.71e-37 | 129 |
| MS.gene062853.t1 | MTR_7g065740 | 35.407 | 209 | 129 | 4 | 4 | 208 | 7 | 213 | 1.09e-36 | 128 |
| MS.gene062853.t1 | MTR_1g090090 | 39.234 | 209 | 122 | 4 | 4 | 208 | 3 | 210 | 2.09e-36 | 127 |
| MS.gene062853.t1 | MTR_1g090150 | 35.484 | 217 | 134 | 4 | 4 | 216 | 3 | 217 | 6.41e-36 | 126 |
| MS.gene062853.t1 | MTR_7g065230 | 37.500 | 208 | 120 | 5 | 4 | 208 | 7 | 207 | 2.13e-35 | 125 |
| MS.gene062853.t1 | MTR_7g065265 | 36.538 | 208 | 127 | 4 | 4 | 208 | 7 | 212 | 2.43e-34 | 122 |
| MS.gene062853.t1 | MTR_7g065680 | 35.577 | 208 | 125 | 5 | 4 | 208 | 7 | 208 | 5.85e-34 | 121 |
| MS.gene062853.t1 | MTR_7g065270 | 36.058 | 208 | 128 | 4 | 4 | 208 | 7 | 212 | 6.81e-34 | 121 |
| MS.gene062853.t1 | MTR_7g065700 | 35.545 | 211 | 127 | 5 | 1 | 208 | 4 | 208 | 2.56e-33 | 119 |
| MS.gene062853.t1 | MTR_7g065600 | 36.634 | 202 | 123 | 4 | 5 | 203 | 8 | 207 | 3.86e-33 | 119 |
| MS.gene062853.t1 | MTR_7g065290 | 36.058 | 208 | 128 | 4 | 4 | 208 | 7 | 212 | 1.15e-32 | 118 |
| MS.gene062853.t1 | MTR_1g115195 | 34.135 | 208 | 129 | 4 | 4 | 205 | 3 | 208 | 1.29e-32 | 117 |
| MS.gene062853.t1 | MTR_7g065640 | 33.171 | 205 | 118 | 4 | 5 | 208 | 8 | 194 | 5.81e-31 | 113 |
| MS.gene062853.t1 | MTR_7g065260 | 37.129 | 202 | 122 | 4 | 4 | 202 | 14 | 213 | 5.20e-30 | 111 |
| MS.gene062853.t1 | MTR_4g043640 | 57.143 | 42 | 18 | 0 | 148 | 189 | 44 | 85 | 4.93e-13 | 62.8 |
| MS.gene062853.t1 | MTR_5g037390 | 41.860 | 86 | 48 | 1 | 30 | 113 | 13 | 98 | 8.53e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062853.t1 | AT1G17180 | 61.644 | 219 | 84 | 0 | 1 | 219 | 1 | 219 | 1.22e-103 | 298 |
| MS.gene062853.t1 | AT1G78380 | 64.486 | 214 | 76 | 0 | 1 | 214 | 1 | 214 | 1.73e-103 | 298 |
| MS.gene062853.t1 | AT1G78340 | 60.930 | 215 | 84 | 0 | 1 | 215 | 1 | 215 | 1.68e-97 | 283 |
| MS.gene062853.t1 | AT1G17170 | 60.274 | 219 | 86 | 1 | 1 | 219 | 1 | 218 | 2.52e-97 | 282 |
| MS.gene062853.t1 | AT1G78370 | 61.215 | 214 | 83 | 0 | 1 | 214 | 1 | 214 | 3.50e-97 | 282 |
| MS.gene062853.t1 | AT1G78360 | 60.909 | 220 | 85 | 1 | 1 | 219 | 1 | 220 | 9.11e-97 | 281 |
| MS.gene062853.t1 | AT1G78320 | 59.545 | 220 | 88 | 1 | 1 | 219 | 1 | 220 | 1.56e-94 | 275 |
| MS.gene062853.t1 | AT1G17190 | 57.339 | 218 | 92 | 1 | 1 | 217 | 1 | 218 | 1.50e-89 | 263 |
| MS.gene062853.t1 | AT1G53680 | 53.881 | 219 | 99 | 2 | 3 | 219 | 6 | 224 | 3.11e-88 | 259 |
| MS.gene062853.t1 | AT3G43800 | 51.852 | 216 | 100 | 3 | 4 | 215 | 5 | 220 | 3.89e-78 | 234 |
| MS.gene062853.t1 | AT1G78320 | 51.818 | 220 | 78 | 2 | 1 | 219 | 1 | 193 | 2.27e-75 | 226 |
| MS.gene062853.t1 | AT1G10360 | 41.743 | 218 | 118 | 5 | 1 | 209 | 1 | 218 | 4.47e-50 | 162 |
| MS.gene062853.t1 | AT3G09270 | 41.204 | 216 | 121 | 3 | 5 | 217 | 7 | 219 | 2.95e-48 | 158 |
| MS.gene062853.t1 | AT1G59700 | 41.743 | 218 | 112 | 5 | 4 | 209 | 6 | 220 | 5.11e-47 | 155 |
| MS.gene062853.t1 | AT1G59670 | 43.578 | 218 | 108 | 5 | 4 | 209 | 6 | 220 | 6.23e-45 | 150 |
| MS.gene062853.t1 | AT2G29420 | 39.901 | 203 | 119 | 2 | 2 | 202 | 7 | 208 | 7.94e-45 | 149 |
| MS.gene062853.t1 | AT1G10370 | 39.189 | 222 | 121 | 4 | 2 | 212 | 3 | 221 | 3.45e-44 | 147 |
| MS.gene062853.t1 | AT1G27130 | 36.697 | 218 | 123 | 4 | 3 | 208 | 5 | 219 | 4.20e-42 | 142 |
| MS.gene062853.t1 | AT1G74590 | 40.000 | 195 | 111 | 4 | 3 | 191 | 6 | 200 | 6.45e-42 | 142 |
| MS.gene062853.t1 | AT2G29490 | 36.279 | 215 | 133 | 2 | 5 | 216 | 8 | 221 | 2.51e-40 | 137 |
| MS.gene062853.t1 | AT2G29470 | 36.620 | 213 | 128 | 5 | 5 | 212 | 8 | 218 | 8.72e-40 | 136 |
| MS.gene062853.t1 | AT1G27140 | 39.024 | 205 | 115 | 5 | 15 | 209 | 17 | 221 | 8.86e-40 | 137 |
| MS.gene062853.t1 | AT2G29450 | 39.234 | 209 | 114 | 6 | 4 | 204 | 6 | 209 | 3.37e-39 | 135 |
| MS.gene062853.t1 | AT2G29480 | 40.000 | 205 | 115 | 6 | 5 | 204 | 8 | 209 | 4.62e-39 | 134 |
| MS.gene062853.t1 | AT2G29440 | 39.713 | 209 | 112 | 6 | 4 | 204 | 6 | 208 | 2.85e-38 | 132 |
| MS.gene062853.t1 | AT1G69920 | 35.714 | 224 | 115 | 5 | 5 | 209 | 35 | 248 | 3.46e-38 | 133 |
| MS.gene062853.t1 | AT2G29460 | 38.164 | 207 | 120 | 6 | 3 | 204 | 6 | 209 | 8.86e-38 | 131 |
| MS.gene062853.t1 | AT1G69930 | 35.849 | 212 | 129 | 3 | 5 | 209 | 13 | 224 | 1.64e-37 | 130 |
| MS.gene062853.t1 | AT5G62480 | 32.444 | 225 | 142 | 3 | 1 | 215 | 5 | 229 | 1.67e-36 | 128 |
| MS.gene062853.t1 | AT5G62480 | 27.111 | 225 | 128 | 4 | 1 | 215 | 5 | 203 | 1.05e-20 | 86.7 |
| MS.gene062853.t1 | AT5G62480 | 27.111 | 225 | 127 | 4 | 1 | 215 | 5 | 202 | 1.32e-20 | 86.3 |
Find 36 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAGCTCAAGCTAGATTT+TGG | 0.158333 | 2.4:-25203217 | MS.gene062853:CDS |
| ACATTTGGGTTTCTTGATAT+TGG | 0.275190 | 2.4:-25202348 | MS.gene062853:CDS |
| ACCGGAATCTTCTTATGAAT+TGG | 0.283651 | 2.4:+25203344 | None:intergenic |
| TGCAATACATAGATGAAGTT+TGG | 0.296178 | 2.4:-25203277 | MS.gene062853:CDS |
| GGTTGATTATAGTGACAAAA+AGG | 0.317820 | 2.4:-25203195 | MS.gene062853:intron |
| GCATAAAACCAGCTATAAAA+AGG | 0.324151 | 2.4:+25202318 | None:intergenic |
| TTTATGGTGGTGACACATTT+GGG | 0.324656 | 2.4:-25202362 | MS.gene062853:CDS |
| GACATATGGCAACTTCAAAA+TGG | 0.325407 | 2.4:-25202289 | MS.gene062853:CDS |
| GATACATGGGCTAGCATGTT+TGG | 0.368138 | 2.4:-25203464 | MS.gene062853:CDS |
| TTGGTCCAAGCCATTAGTTT+AGG | 0.371833 | 2.4:+25202255 | None:intergenic |
| TCATACACTTTCTTCTGATC+AGG | 0.396880 | 2.4:+25202195 | None:intergenic |
| TCCAATTCATAAGAAGATTC+CGG | 0.396966 | 2.4:-25203345 | MS.gene062853:CDS |
| ATCTCTCTCCATGCATCTCT+TGG | 0.408511 | 2.4:+25202236 | None:intergenic |
| GCTCTCTCATAAGGATTAGA+AGG | 0.410231 | 2.4:+25203233 | None:intergenic |
| TTTCCATTGTGGATAAGAAC+CGG | 0.432761 | 2.4:+25203326 | None:intergenic |
| AAGAAAATGTGGCTTTCAAA+AGG | 0.435917 | 2.4:-25202462 | MS.gene062853:CDS |
| AGAATATGAGGAAGGGAAGA+TGG | 0.442414 | 2.4:-25202436 | MS.gene062853:CDS |
| AACGGAGTGTCCTAAACTAA+TGG | 0.448765 | 2.4:-25202265 | MS.gene062853:CDS |
| CATTAAGAAAGTACTTGGAT+TGG | 0.454767 | 2.4:-25202160 | MS.gene062853:CDS |
| CTAGCTTGAGCTCTCTCATA+AGG | 0.462092 | 2.4:+25203224 | None:intergenic |
| GTGAGCATTAAGAAAGTACT+TGG | 0.462381 | 2.4:-25202165 | MS.gene062853:CDS |
| AATAATTGCAGATTCACAAA+TGG | 0.471536 | 2.4:+25203301 | None:intergenic |
| AAAGGAGAAGAATATGAGGA+AGG | 0.489666 | 2.4:-25202444 | MS.gene062853:CDS |
| TTCAAAAGGAGAAGAATATG+AGG | 0.519962 | 2.4:-25202448 | MS.gene062853:CDS |
| TGGCAACTTCAAAATGGAAA+CGG | 0.530941 | 2.4:-25202283 | MS.gene062853:CDS |
| GGATTCATCTGAAGAAGTAA+AGG | 0.531810 | 2.4:+25203365 | None:intergenic |
| ATGACACTTGGAAGAAAATG+TGG | 0.537717 | 2.4:-25202473 | MS.gene062853:CDS |
| AGGTAATTCTGTTAGATACA+TGG | 0.538022 | 2.4:-25203478 | MS.gene062853:CDS |
| AAGGAGAAGAATATGAGGAA+GGG | 0.539682 | 2.4:-25202443 | MS.gene062853:CDS |
| ATATGTAGGTTTATGACACT+TGG | 0.541669 | 2.4:-25202485 | MS.gene062853:intron |
| AGTGTCCTAAACTAATGGCT+TGG | 0.548948 | 2.4:-25202260 | MS.gene062853:CDS |
| GGTAATTCTGTTAGATACAT+GGG | 0.584405 | 2.4:-25203477 | MS.gene062853:CDS |
| ATTCCGGTTCTTATCCACAA+TGG | 0.600329 | 2.4:-25203329 | MS.gene062853:CDS |
| CTCTATCTTTAAGACACTAG+AGG | 0.601570 | 2.4:-25202406 | MS.gene062853:CDS |
| TCTATCTTTAAGACACTAGA+GGG | 0.610752 | 2.4:-25202405 | MS.gene062853:CDS |
| GGCTTGGACCAAGAGATGCA+TGG | 0.654997 | 2.4:-25202244 | MS.gene062853:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGATATAAAATTAAG+AGG | + | chr2.4:25202498-25202517 | None:intergenic | 10.0% |
| !! | ACAAAATTATCAATATATAT+AGG | + | chr2.4:25202870-25202889 | None:intergenic | 10.0% |
| !! | CAAAATTATCAATATATATA+GGG | + | chr2.4:25202869-25202888 | None:intergenic | 10.0% |
| !!! | TCTTAATTTTATATCAATTT+TGG | - | chr2.4:25202497-25202516 | MS.gene062853:intron | 10.0% |
| !! | AAAAAGGTAACTTCTTAATT+TGG | - | chr2.4:25202464-25202483 | MS.gene062853:CDS | 20.0% |
| !! | AAAATATATACTAACAAGGA+TGG | + | chr2.4:25202825-25202844 | None:intergenic | 20.0% |
| !! | AGCATATTAATCTTATAATC+TGG | + | chr2.4:25202653-25202672 | None:intergenic | 20.0% |
| !! | ATATGCTTATTAGAAATTTC+AGG | - | chr2.4:25202739-25202758 | MS.gene062853:intron | 20.0% |
| !! | CCAAAAAATATATACTAACA+AGG | + | chr2.4:25202829-25202848 | None:intergenic | 20.0% |
| !! | GGATAAAGTAAATTAAATGA+TGG | - | chr2.4:25203102-25203121 | MS.gene062853:intron | 20.0% |
| !! | GTGCAAAATATTAGAAATTA+TGG | - | chr2.4:25202710-25202729 | MS.gene062853:intron | 20.0% |
| !! | TATGCTTATTAGAAATTTCA+GGG | - | chr2.4:25202740-25202759 | MS.gene062853:intron | 20.0% |
| !!! | AAAATTTCTGACTTAACTTT+TGG | + | chr2.4:25202960-25202979 | None:intergenic | 20.0% |
| !!! | CCTTGTTAGTATATATTTTT+TGG | - | chr2.4:25202826-25202845 | MS.gene062853:intron | 20.0% |
| !!! | CTTTTTTTAGCTTATGAAAT+CGG | - | chr2.4:25202796-25202815 | MS.gene062853:intron | 20.0% |
| !!! | TTTTGGTCTATAAAAAGTTA+AGG | + | chr2.4:25202943-25202962 | None:intergenic | 20.0% |
| ! | AATAATTGCAGATTCACAAA+TGG | + | chr2.4:25202345-25202364 | None:intergenic | 25.0% |
| ! | ACAGAGATTAAAAAAACTGA+TGG | - | chr2.4:25203013-25203032 | MS.gene062853:intron | 25.0% |
| ! | CAGAGATTAAAAAAACTGAT+GGG | - | chr2.4:25203014-25203033 | MS.gene062853:intron | 25.0% |
| ! | TTGATCTTGAATGTATATGT+AGG | - | chr2.4:25203144-25203163 | MS.gene062853:intron | 25.0% |
| !! | TCTAATATTTTGCACTTGAA+TGG | + | chr2.4:25202705-25202724 | None:intergenic | 25.0% |
| !!! | TTTTATGCTTTTGAGACATA+TGG | - | chr2.4:25203340-25203359 | MS.gene062853:CDS | 25.0% |
| AAGAAAATGTGGCTTTCAAA+AGG | - | chr2.4:25203181-25203200 | MS.gene062853:intron | 30.0% | |
| AGGTAATTCTGTTAGATACA+TGG | - | chr2.4:25202165-25202184 | MS.gene062853:CDS | 30.0% | |
| ATATGTAGGTTTATGACACT+TGG | - | chr2.4:25203158-25203177 | MS.gene062853:intron | 30.0% | |
| GCATAAAACCAGCTATAAAA+AGG | + | chr2.4:25203328-25203347 | None:intergenic | 30.0% | |
| GGTAATTCTGTTAGATACAT+GGG | - | chr2.4:25202166-25202185 | MS.gene062853:CDS | 30.0% | |
| GGTTGATTATAGTGACAAAA+AGG | - | chr2.4:25202448-25202467 | MS.gene062853:CDS | 30.0% | |
| TAGAGTCTAATCTCATTGAA+GGG | + | chr2.4:25202540-25202559 | None:intergenic | 30.0% | |
| TCATCCAAAAATTAAACTCG+AGG | - | chr2.4:25202610-25202629 | MS.gene062853:intron | 30.0% | |
| TCCAATTCATAAGAAGATTC+CGG | - | chr2.4:25202298-25202317 | MS.gene062853:CDS | 30.0% | |
| TCTATAAGTAACAAAAGTCG+TGG | - | chr2.4:25203081-25203100 | MS.gene062853:intron | 30.0% | |
| TGCAATACATAGATGAAGTT+TGG | - | chr2.4:25202366-25202385 | MS.gene062853:CDS | 30.0% | |
| TTAGAGTCTAATCTCATTGA+AGG | + | chr2.4:25202541-25202560 | None:intergenic | 30.0% | |
| TTCAAAAGGAGAAGAATATG+AGG | - | chr2.4:25203195-25203214 | MS.gene062853:intron | 30.0% | |
| ! | ACATTTGGGTTTCTTGATAT+TGG | - | chr2.4:25203295-25203314 | MS.gene062853:CDS | 30.0% |
| ! | ATAATCTGGAACATAACTCA+AGG | + | chr2.4:25202639-25202658 | None:intergenic | 30.0% |
| ! | GTTTGATTCCTTTTTATAGC+TGG | - | chr2.4:25203317-25203336 | MS.gene062853:CDS | 30.0% |
| ! | TGATGGACAATACAAACATT+CGG | - | chr2.4:25203119-25203138 | MS.gene062853:intron | 30.0% |
| !! | CATTAAGAAAGTACTTGGAT+TGG | - | chr2.4:25203483-25203502 | MS.gene062853:CDS | 30.0% |
| !! | CGACTTTTGTTACTTATAGA+CGG | + | chr2.4:25203081-25203100 | None:intergenic | 30.0% |
| !! | TCTATCTTTAAGACACTAGA+GGG | - | chr2.4:25203238-25203257 | MS.gene062853:CDS | 30.0% |
| !!! | TTGAGTGACAAGCTTTTTTA+TGG | - | chr2.4:25203265-25203284 | MS.gene062853:CDS | 30.0% |
| AAACTGATGGGAAATTTCAC+AGG | - | chr2.4:25203026-25203045 | MS.gene062853:intron | 35.0% | |
| AAAGGAGAAGAATATGAGGA+AGG | - | chr2.4:25203199-25203218 | MS.gene062853:CDS | 35.0% | |
| AAGGAGAAGAATATGAGGAA+GGG | - | chr2.4:25203200-25203219 | MS.gene062853:CDS | 35.0% | |
| ACCGGAATCTTCTTATGAAT+TGG | + | chr2.4:25202302-25202321 | None:intergenic | 35.0% | |
| ATGACACTTGGAAGAAAATG+TGG | - | chr2.4:25203170-25203189 | MS.gene062853:intron | 35.0% | |
| GACATATGGCAACTTCAAAA+TGG | - | chr2.4:25203354-25203373 | MS.gene062853:CDS | 35.0% | |
| GGATTCATCTGAAGAAGTAA+AGG | + | chr2.4:25202281-25202300 | None:intergenic | 35.0% | |
| TCATACACTTTCTTCTGATC+AGG | + | chr2.4:25203451-25203470 | None:intergenic | 35.0% | |
| TGGCAACTTCAAAATGGAAA+CGG | - | chr2.4:25203360-25203379 | MS.gene062853:CDS | 35.0% | |
| TTTCCATTGTGGATAAGAAC+CGG | + | chr2.4:25202320-25202339 | None:intergenic | 35.0% | |
| ! | TTTATGGTGGTGACACATTT+GGG | - | chr2.4:25203281-25203300 | MS.gene062853:CDS | 35.0% |
| !! | CACAAATGGATTTTCCATTG+TGG | + | chr2.4:25202331-25202350 | None:intergenic | 35.0% |
| !! | CTCTATCTTTAAGACACTAG+AGG | - | chr2.4:25203237-25203256 | MS.gene062853:CDS | 35.0% |
| !! | GAAGCCTCGAGTTTAATTTT+TGG | + | chr2.4:25202617-25202636 | None:intergenic | 35.0% |
| !! | GTGAGCATTAAGAAAGTACT+TGG | - | chr2.4:25203478-25203497 | MS.gene062853:CDS | 35.0% |
| !! | TTTTATGGTGGTGACACATT+TGG | - | chr2.4:25203280-25203299 | MS.gene062853:CDS | 35.0% |
| !!! | AGTGACAAGCTTTTTTATGG+TGG | - | chr2.4:25203268-25203287 | MS.gene062853:CDS | 35.0% |
| AGAATATGAGGAAGGGAAGA+TGG | - | chr2.4:25203207-25203226 | MS.gene062853:CDS | 40.0% | |
| AGTGTCCTAAACTAATGGCT+TGG | - | chr2.4:25203383-25203402 | MS.gene062853:CDS | 40.0% | |
| ATTCCGGTTCTTATCCACAA+TGG | - | chr2.4:25202314-25202333 | MS.gene062853:CDS | 40.0% | |
| CACAGGAACGGTAAAAAATG+TGG | - | chr2.4:25203043-25203062 | MS.gene062853:intron | 40.0% | |
| GATGGGAAATTTCACAGGAA+CGG | - | chr2.4:25203031-25203050 | MS.gene062853:intron | 40.0% | |
| GCTCTCTCATAAGGATTAGA+AGG | + | chr2.4:25202413-25202432 | None:intergenic | 40.0% | |
| ! | AACGGAGTGTCCTAAACTAA+TGG | - | chr2.4:25203378-25203397 | MS.gene062853:CDS | 40.0% |
| ! | AGAGAGCTCAAGCTAGATTT+TGG | - | chr2.4:25202426-25202445 | MS.gene062853:CDS | 40.0% |
| ! | GAGAGCTCAAGCTAGATTTT+GGG | - | chr2.4:25202427-25202446 | MS.gene062853:CDS | 40.0% |
| ! | TTGGTCCAAGCCATTAGTTT+AGG | + | chr2.4:25203391-25203410 | None:intergenic | 40.0% |
| ATCTCTCTCCATGCATCTCT+TGG | + | chr2.4:25203410-25203429 | None:intergenic | 45.0% | |
| CTAGCTTGAGCTCTCTCATA+AGG | + | chr2.4:25202422-25202441 | None:intergenic | 45.0% | |
| !! | GATACATGGGCTAGCATGTT+TGG | - | chr2.4:25202179-25202198 | MS.gene062853:CDS | 45.0% |
| GGCTTGGACCAAGAGATGCA+TGG | - | chr2.4:25203399-25203418 | MS.gene062853:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 25202155 | 25203510 | 25202155 | ID=MS.gene062853 |
| chr2.4 | mRNA | 25202155 | 25203510 | 25202155 | ID=MS.gene062853.t1;Parent=MS.gene062853 |
| chr2.4 | exon | 25203196 | 25203510 | 25203196 | ID=MS.gene062853.t1.exon1;Parent=MS.gene062853.t1 |
| chr2.4 | CDS | 25203196 | 25203510 | 25203196 | ID=cds.MS.gene062853.t1;Parent=MS.gene062853.t1 |
| chr2.4 | exon | 25202155 | 25202499 | 25202155 | ID=MS.gene062853.t1.exon2;Parent=MS.gene062853.t1 |
| chr2.4 | CDS | 25202155 | 25202499 | 25202155 | ID=cds.MS.gene062853.t1;Parent=MS.gene062853.t1 |
| Gene Sequence |
| Protein sequence |
