Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99854.t1 | XP_013465635.1 | 100 | 66 | 0 | 0 | 1 | 66 | 353 | 418 | 2.50E-28 | 134 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99854.t1 | A0A072VDJ3 | 100.0 | 66 | 0 | 0 | 1 | 66 | 353 | 418 | 1.8e-28 | 134.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene99854 | -0.812141 | 4.92E-51 | -1.69E-46 |
| MS.gene049149 | MS.gene99854 | 0.814461 | 1.52E-51 | -1.69E-46 |
| MS.gene049150 | MS.gene99854 | 0.824946 | 6.13E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene99854 | 0.823828 | 1.12E-53 | -1.69E-46 |
| MS.gene04933 | MS.gene99854 | 0.818796 | 1.63E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene99854 | 0.875065 | 4.13E-68 | -1.69E-46 |
| MS.gene049351 | MS.gene99854 | 0.855915 | 4.58E-62 | -1.69E-46 |
| MS.gene049356 | MS.gene99854 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene99854 | 0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene99854 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene99854 | 0.824182 | 9.27E-54 | -1.69E-46 |
| MS.gene049599 | MS.gene99854 | -0.817099 | 3.93E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene99854 | 0.879743 | 9.71E-70 | -1.69E-46 |
| MS.gene049662 | MS.gene99854 | 0.880962 | 3.56E-70 | -1.69E-46 |
| MS.gene049681 | MS.gene99854 | 0.808434 | 3.10E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene99854 | 0.885183 | 1.01E-71 | -1.69E-46 |
| MS.gene049805 | MS.gene99854 | 0.802559 | 5.30E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene99854 | 0.871156 | 8.47E-67 | -1.69E-46 |
| MS.gene049915 | MS.gene99854 | 0.812313 | 4.51E-51 | -1.69E-46 |
| MS.gene049993 | MS.gene99854 | 0.829219 | 5.82E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene99854 | 0.84337 | 1.46E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene99854 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene99854 | 0.81878 | 1.64E-52 | -1.69E-46 |
| MS.gene050231 | MS.gene99854 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene99854 | 0.903284 | 4.06E-79 | -1.69E-46 |
| MS.gene050397 | MS.gene99854 | 0.899605 | 1.68E-77 | -1.69E-46 |
| MS.gene050404 | MS.gene99854 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene99854 | 0.854063 | 1.58E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene99854 | -0.829009 | 6.54E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene99854 | 0.850708 | 1.43E-60 | -1.69E-46 |
| MS.gene050464 | MS.gene99854 | 0.893582 | 5.50E-75 | -1.69E-46 |
| MS.gene050529 | MS.gene99854 | 0.88122 | 2.88E-70 | -1.69E-46 |
| MS.gene050558 | MS.gene99854 | 0.832863 | 7.42E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene99854 | 0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene99854 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene99854 | 0.81833 | 2.07E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene99854 | 0.81891 | 1.53E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene99854 | 0.897669 | 1.12E-76 | -1.69E-46 |
| MS.gene050820 | MS.gene99854 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene050971 | MS.gene99854 | 0.817965 | 2.51E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene99854 | 0.865793 | 4.56E-65 | -1.69E-46 |
| MS.gene05105 | MS.gene99854 | 0.881458 | 2.36E-70 | -1.69E-46 |
| MS.gene05119 | MS.gene99854 | -0.835447 | 1.67E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene99854 | 0.82555 | 4.41E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene99854 | 0.854218 | 1.42E-61 | -1.69E-46 |
| MS.gene051525 | MS.gene99854 | 0.874042 | 9.20E-68 | -1.69E-46 |
| MS.gene051582 | MS.gene99854 | 0.876727 | 1.11E-68 | -1.69E-46 |
| MS.gene051605 | MS.gene99854 | 0.81286 | 3.43E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene99854 | 0.804754 | 1.86E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene99854 | 0.880679 | 4.50E-70 | -1.69E-46 |
| MS.gene051877 | MS.gene99854 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene99854 | 0.830249 | 3.27E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene99854 | -0.87594 | 2.07E-68 | -1.69E-46 |
| MS.gene052077 | MS.gene99854 | 0.866484 | 2.76E-65 | -1.69E-46 |
| MS.gene052078 | MS.gene99854 | 0.868168 | 7.98E-66 | -1.69E-46 |
| MS.gene052134 | MS.gene99854 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene99854 | 0.82633 | 2.88E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene99854 | 0.840018 | 1.12E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene99854 | 0.879824 | 9.09E-70 | -1.69E-46 |
| MS.gene052207 | MS.gene99854 | 0.833222 | 6.04E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene99854 | 0.912709 | 1.43E-83 | -1.69E-46 |
| MS.gene052255 | MS.gene99854 | 0.835338 | 1.78E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene99854 | 0.888811 | 4.24E-73 | -1.69E-46 |
| MS.gene052322 | MS.gene99854 | 0.833824 | 4.27E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene99854 | 0.809074 | 2.26E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene99854 | 0.891608 | 3.40E-74 | -1.69E-46 |
| MS.gene052414 | MS.gene99854 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene052421 | MS.gene99854 | 0.837763 | 4.29E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene99854 | 0.857718 | 1.35E-62 | -1.69E-46 |
| MS.gene052484 | MS.gene99854 | 0.810117 | 1.35E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene99854 | 0.866505 | 2.72E-65 | -1.69E-46 |
| MS.gene052505 | MS.gene99854 | 0.802378 | 5.77E-49 | -1.69E-46 |
| MS.gene052767 | MS.gene99854 | 0.809231 | 2.10E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene99854 | 0.836975 | 6.83E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene99854 | 0.835803 | 1.36E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene99854 | 0.808547 | 2.94E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene99854 | 0.889385 | 2.54E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene99854 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene99854 | 0.858651 | 7.12E-63 | -1.69E-46 |
| MS.gene053758 | MS.gene99854 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene99854 | 0.911131 | 8.60E-83 | -1.69E-46 |
| MS.gene053907 | MS.gene99854 | 0.819275 | 1.27E-52 | -1.69E-46 |
| MS.gene053928 | MS.gene99854 | 0.836399 | 9.57E-57 | -1.69E-46 |
| MS.gene053971 | MS.gene99854 | 0.816687 | 4.86E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene99854 | 0.847789 | 9.26E-60 | -1.69E-46 |
| MS.gene054011 | MS.gene99854 | 0.854098 | 1.54E-61 | -1.69E-46 |
| MS.gene054012 | MS.gene99854 | 0.847576 | 1.06E-59 | -1.69E-46 |
| MS.gene054013 | MS.gene99854 | 0.843138 | 1.68E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene99854 | 0.835449 | 1.67E-56 | -1.69E-46 |
| MS.gene05413 | MS.gene99854 | 0.803655 | 3.14E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene99854 | 0.87233 | 3.46E-67 | -1.69E-46 |
| MS.gene054349 | MS.gene99854 | 0.83869 | 2.48E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene99854 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene99854 | 0.865773 | 4.63E-65 | -1.69E-46 |
| MS.gene054542 | MS.gene99854 | 0.805251 | 1.46E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene99854 | 0.819801 | 9.59E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene99854 | 0.826745 | 2.29E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene99854 | 0.822709 | 2.05E-53 | -1.69E-46 |
| MS.gene054917 | MS.gene99854 | 0.800704 | 1.27E-48 | -1.69E-46 |
| MS.gene054918 | MS.gene99854 | 0.850001 | 2.25E-60 | -1.69E-46 |
| MS.gene054930 | MS.gene99854 | 0.832958 | 7.02E-56 | -1.69E-46 |
| MS.gene054955 | MS.gene99854 | 0.814768 | 1.30E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene99854 | 0.858544 | 7.66E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene99854 | 0.806859 | 6.70E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene99854 | 0.927253 | 1.52E-91 | -1.69E-46 |
| MS.gene055277 | MS.gene99854 | 0.901278 | 3.15E-78 | -1.69E-46 |
| MS.gene055369 | MS.gene99854 | 0.839699 | 1.36E-57 | -1.69E-46 |
| MS.gene055390 | MS.gene99854 | 0.855025 | 8.32E-62 | -1.69E-46 |
| MS.gene055412 | MS.gene99854 | 0.808355 | 3.23E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene99854 | 0.890291 | 1.12E-73 | -1.69E-46 |
| MS.gene055428 | MS.gene99854 | 0.880061 | 7.49E-70 | -1.69E-46 |
| MS.gene05553 | MS.gene99854 | 0.867421 | 1.39E-65 | -1.69E-46 |
| MS.gene055564 | MS.gene99854 | 0.81743 | 3.31E-52 | -1.69E-46 |
| MS.gene055601 | MS.gene99854 | -0.812334 | 4.47E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene99854 | 0.856186 | 3.81E-62 | -1.69E-46 |
| MS.gene055666 | MS.gene99854 | 0.803029 | 4.24E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene99854 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene99854 | 0.803029 | 4.24E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene99854 | 0.82335 | 1.45E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene99854 | 0.895145 | 1.26E-75 | -1.69E-46 |
| MS.gene056407 | MS.gene99854 | 0.878181 | 3.46E-69 | -1.69E-46 |
| MS.gene056410 | MS.gene99854 | 0.821389 | 4.14E-53 | -1.69E-46 |
| MS.gene056447 | MS.gene99854 | 0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene056451 | MS.gene99854 | 0.837453 | 5.15E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene99854 | 0.844985 | 5.38E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene99854 | 0.823413 | 1.40E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene99854 | 0.881978 | 1.53E-70 | -1.69E-46 |
| MS.gene056659 | MS.gene99854 | 0.854657 | 1.06E-61 | -1.69E-46 |
| MS.gene056723 | MS.gene99854 | 0.846669 | 1.88E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene99854 | 0.822138 | 2.78E-53 | -1.69E-46 |
| MS.gene056846 | MS.gene99854 | 0.813162 | 2.94E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene99854 | -0.857128 | 2.02E-62 | -1.69E-46 |
| MS.gene056902 | MS.gene99854 | 0.819074 | 1.41E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene99854 | 0.832916 | 7.20E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene99854 | 0.808387 | 3.18E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene99854 | 0.899101 | 2.77E-77 | -1.69E-46 |
| MS.gene057121 | MS.gene99854 | 0.868705 | 5.35E-66 | -1.69E-46 |
| MS.gene057123 | MS.gene99854 | 0.824644 | 7.22E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene99854 | 0.855695 | 5.31E-62 | -1.69E-46 |
| MS.gene057146 | MS.gene99854 | 0.834046 | 3.76E-56 | -1.69E-46 |
| MS.gene057245 | MS.gene99854 | 0.853414 | 2.43E-61 | -1.69E-46 |
| MS.gene057310 | MS.gene99854 | 0.815252 | 1.02E-51 | -1.69E-46 |
| MS.gene057330 | MS.gene99854 | 0.811622 | 6.39E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene99854 | 0.844171 | 8.92E-59 | -1.69E-46 |
| MS.gene057396 | MS.gene99854 | 0.83175 | 1.40E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene99854 | 0.830346 | 3.09E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene99854 | 0.862644 | 4.38E-64 | -1.69E-46 |
| MS.gene057449 | MS.gene99854 | 0.84695 | 1.57E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene99854 | 0.858663 | 7.06E-63 | -1.69E-46 |
| MS.gene057469 | MS.gene99854 | 0.833426 | 5.37E-56 | -1.69E-46 |
| MS.gene057476 | MS.gene99854 | 0.827845 | 1.25E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene99854 | 0.866569 | 2.59E-65 | -1.69E-46 |
| MS.gene057779 | MS.gene99854 | 0.824648 | 7.20E-54 | -1.69E-46 |
| MS.gene057782 | MS.gene99854 | 0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene99854 | 0.82689 | 2.12E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene99854 | 0.855569 | 5.78E-62 | -1.69E-46 |
| MS.gene057825 | MS.gene99854 | 0.825291 | 5.08E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene99854 | 0.903991 | 1.96E-79 | -1.69E-46 |
| MS.gene058006 | MS.gene99854 | 0.81692 | 4.31E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene99854 | 0.824407 | 8.21E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene99854 | 0.821721 | 3.47E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene99854 | 0.888544 | 5.37E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene99854 | 0.865783 | 4.60E-65 | -1.69E-46 |
| MS.gene058233 | MS.gene99854 | 0.872203 | 3.81E-67 | -1.69E-46 |
| MS.gene058276 | MS.gene99854 | 0.836762 | 7.74E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene99854 | 0.861275 | 1.15E-63 | -1.69E-46 |
| MS.gene058365 | MS.gene99854 | 0.814612 | 1.41E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene99854 | 0.806375 | 8.48E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene99854 | 0.808175 | 3.52E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene99854 | 0.812254 | 4.65E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene99854 | 0.887575 | 1.26E-72 | -1.69E-46 |
| MS.gene058700 | MS.gene99854 | 0.838875 | 2.22E-57 | -1.69E-46 |
| MS.gene058710 | MS.gene99854 | 0.8598 | 3.22E-63 | -1.69E-46 |
| MS.gene058749 | MS.gene99854 | 0.817184 | 3.76E-52 | -1.69E-46 |
| MS.gene058787 | MS.gene99854 | 0.829176 | 5.96E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene99854 | 0.834249 | 3.34E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene99854 | 0.879194 | 1.52E-69 | -1.69E-46 |
| MS.gene058928 | MS.gene99854 | 0.861879 | 7.52E-64 | -1.69E-46 |
| MS.gene058995 | MS.gene99854 | 0.823107 | 1.65E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene99854 | 0.814326 | 1.63E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene99854 | 0.908056 | 2.59E-81 | -1.69E-46 |
| MS.gene059082 | MS.gene99854 | 0.822103 | 2.83E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene99854 | 0.845681 | 3.49E-59 | -1.69E-46 |
| MS.gene059247 | MS.gene99854 | 0.801706 | 7.93E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene99854 | 0.854379 | 1.28E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene99854 | 0.856194 | 3.79E-62 | -1.69E-46 |
| MS.gene059326 | MS.gene99854 | 0.811494 | 6.81E-51 | -1.69E-46 |
| MS.gene059342 | MS.gene99854 | 0.806466 | 8.11E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene99854 | 0.835263 | 1.86E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene99854 | 0.886055 | 4.77E-72 | -1.69E-46 |
| MS.gene059462 | MS.gene99854 | 0.840088 | 1.07E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene99854 | 0.865551 | 5.44E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene99854 | 0.826183 | 3.12E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene99854 | 0.872898 | 2.23E-67 | -1.69E-46 |
| MS.gene059676 | MS.gene99854 | 0.853943 | 1.71E-61 | -1.69E-46 |
| MS.gene059688 | MS.gene99854 | 0.913192 | 8.18E-84 | -1.69E-46 |
| MS.gene059692 | MS.gene99854 | 0.910467 | 1.81E-82 | -1.69E-46 |
| MS.gene059695 | MS.gene99854 | 0.909255 | 6.97E-82 | -1.69E-46 |
| MS.gene059807 | MS.gene99854 | 0.827701 | 1.35E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene99854 | 0.898205 | 6.66E-77 | -1.69E-46 |
| MS.gene059876 | MS.gene99854 | 0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene99854 | 0.88706 | 1.99E-72 | -1.69E-46 |
| MS.gene059974 | MS.gene99854 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene060247 | MS.gene99854 | 0.815031 | 1.14E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene99854 | 0.884988 | 1.20E-71 | -1.69E-46 |
| MS.gene060403 | MS.gene99854 | 0.878552 | 2.56E-69 | -1.69E-46 |
| MS.gene060407 | MS.gene99854 | 0.833636 | 4.76E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene99854 | 0.822679 | 2.08E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene99854 | 0.818135 | 2.30E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene99854 | 0.82934 | 5.44E-55 | -1.69E-46 |
| MS.gene060994 | MS.gene99854 | 0.813621 | 2.33E-51 | -1.69E-46 |
| MS.gene061000 | MS.gene99854 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene99854 | 0.80735 | 5.28E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene99854 | 0.93322 | 2.61E-95 | -1.69E-46 |
| MS.gene061051 | MS.gene99854 | -0.85067 | 1.46E-60 | -1.69E-46 |
| MS.gene061114 | MS.gene99854 | -0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene99854 | 0.864539 | 1.13E-64 | -1.69E-46 |
| MS.gene061159 | MS.gene99854 | 0.852692 | 3.91E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99854.t1 | MTR_2g105480 | 100.000 | 66 | 0 | 0 | 1 | 66 | 353 | 418 | 1.73e-40 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99854.t1 | AT1G73110 | 63.636 | 66 | 24 | 0 | 1 | 66 | 270 | 335 | 1.16e-24 | 93.6 |
| MS.gene99854.t1 | AT1G73110 | 63.636 | 66 | 24 | 0 | 1 | 66 | 367 | 432 | 2.99e-24 | 93.6 |
Find 10 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTAGTGGGTTGATGATAT+TGG | 0.294945 | 2.1:+390695 | None:intergenic |
| CAAAGAACAACAGTTGATAA+TGG | 0.386217 | 2.1:+392105 | MS.gene99854:CDS |
| GAATAAATACAGGAAGATTC+TGG | 0.403777 | 2.1:-390763 | None:intergenic |
| ATCGATGCTTTACTTGAGTC+AGG | 0.418408 | 2.1:+392070 | MS.gene99854:CDS |
| ACCTCTGGAGGAATAAATAC+AGG | 0.480480 | 2.1:-390773 | None:intergenic |
| CAAATTTCTCAAAAGAAGAA+AGG | 0.512041 | 2.1:+390739 | MS.gene99854:CDS |
| TCCTGTATTTATTCCTCCAG+AGG | 0.540010 | 2.1:+390772 | MS.gene99854:CDS |
| AATGGAAACTAAACTTTCGA+AGG | 0.571792 | 2.1:+392123 | MS.gene99854:CDS |
| GGATGACTATTTACCTCTGG+AGG | 0.584674 | 2.1:-390785 | None:intergenic |
| TAGTGGGTTGATGATATTGG+AGG | 0.612663 | 2.1:+390698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTCATCAATATTAATT+TGG | - | chr2.1:390881-390900 | None:intergenic | 10.0% |
| !!! | ATTTGATTGTATTTTAAAAA+AGG | + | chr2.1:391027-391046 | MS.gene99854:intron | 10.0% |
| !! | AAATATAGCCAAAATTATTA+GGG | + | chr2.1:390961-390980 | MS.gene99854:intron | 15.0% |
| !! | ATAAATAAGATTGAAATCTA+AGG | + | chr2.1:391303-391322 | MS.gene99854:intron | 15.0% |
| !! | TAAATAAGATTGAAATCTAA+GGG | + | chr2.1:391304-391323 | MS.gene99854:intron | 15.0% |
| !! | TAAATATAGCCAAAATTATT+AGG | + | chr2.1:390960-390979 | MS.gene99854:intron | 15.0% |
| !! | ATAAATAAGACTGAAATCTA+AGG | - | chr2.1:391118-391137 | None:intergenic | 20.0% |
| !! | TAAATAAGACTGAAATCTAA+GGG | - | chr2.1:391117-391136 | None:intergenic | 20.0% |
| !! | TATTGAAACTCAAAATTTGA+AGG | + | chr2.1:391634-391653 | MS.gene99854:intron | 20.0% |
| !! | TTATTGATATTATCATGCAA+AGG | + | chr2.1:391491-391510 | MS.gene99854:intron | 20.0% |
| !!! | AAATTAACTGCTTTTCTATT+TGG | + | chr2.1:392033-392052 | MS.gene99854:intron | 20.0% |
| !!! | AAATTAGTTGCAAATGTTTT+GGG | + | chr2.1:391876-391895 | MS.gene99854:intron | 20.0% |
| !!! | TTATTGGCTAACATTAATTT+CGG | + | chr2.1:391437-391456 | MS.gene99854:intron | 20.0% |
| !!! | TTATTGGCTAACATTAATTT+CGG | - | chr2.1:391456-391437 | None:intergenic | 20.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | + | chr2.1:391050-391069 | MS.gene99854:intron | 25.0% |
| ! | ATAACGATAAAAACATCACA+AGG | - | chr2.1:391701-391720 | None:intergenic | 25.0% |
| ! | ATCACAAGGTAAAATATCAT+GGG | - | chr2.1:391687-391706 | None:intergenic | 25.0% |
| ! | CAAATTTCTCAAAAGAAGAA+AGG | + | chr2.1:390739-390758 | MS.gene99854:CDS | 25.0% |
| !! | AATGTTACTCTTTAAAGACA+AGG | - | chr2.1:391972-391991 | None:intergenic | 25.0% |
| !! | AATTAGTTGCAAATGTTTTG+GGG | + | chr2.1:391877-391896 | MS.gene99854:intron | 25.0% |
| !! | GAAATTAGTTGCAAATGTTT+TGG | + | chr2.1:391875-391894 | MS.gene99854:intron | 25.0% |
| !! | TATTGGCTAACATTAATTTC+GGG | - | chr2.1:391457-391438 | None:intergenic | 25.0% |
| !! | TCAATATTAATTTGGTTGAC+AGG | - | chr2.1:390873-390892 | None:intergenic | 25.0% |
| !!! | CTTTCTTCTTTTGAGAAATT+TGG | - | chr2.1:390741-390760 | None:intergenic | 25.0% |
| AATGGAAACTAAACTTTCGA+AGG | + | chr2.1:392123-392142 | MS.gene99854:CDS | 30.0% | |
| CATCACAAGGTAAAATATCA+TGG | - | chr2.1:391688-391707 | None:intergenic | 30.0% | |
| GAATAAATACAGGAAGATTC+TGG | - | chr2.1:390766-390785 | None:intergenic | 30.0% | |
| TCTTGATATATAGCATTGCT+CGG | - | chr2.1:391174-391193 | None:intergenic | 30.0% | |
| TGAAGAACATTGAAGACTAA+TGG | + | chr2.1:392152-392171 | MS.gene99854:CDS | 30.0% | |
| TTCATCTTCTATCTATCCAA+TGG | - | chr2.1:391534-391553 | None:intergenic | 30.0% | |
| ! | CTACGTTTGTAATTTTCCAT+TGG | + | chr2.1:391515-391534 | MS.gene99854:intron | 30.0% |
| ! | CTTTAAAGACAAGGAAAAGA+AGG | - | chr2.1:391963-391982 | None:intergenic | 30.0% |
| !! | ATTAGTTGCAAATGTTTTGG+GGG | + | chr2.1:391878-391897 | MS.gene99854:intron | 30.0% |
| !! | CAAAGAACAACAGTTGATAA+TGG | + | chr2.1:392105-392124 | MS.gene99854:CDS | 30.0% |
| !! | TAACTGCTTTTCTATTTGGT+TGG | + | chr2.1:392037-392056 | MS.gene99854:intron | 30.0% |
| !! | TCAAGAATGGATTTTCTTGA+TGG | + | chr2.1:391063-391082 | MS.gene99854:intron | 30.0% |
| AAAAGAATTGGCATGAGAGT+CGG | - | chr2.1:391766-391785 | None:intergenic | 35.0% | |
| AAAGGATGACTATTTACCTC+TGG | - | chr2.1:390791-390810 | None:intergenic | 35.0% | |
| ACAAGGTAAAATATCATGGG+TGG | - | chr2.1:391684-391703 | None:intergenic | 35.0% | |
| AGCCAAAATTATTAGGGTCA+TGG | + | chr2.1:390967-390986 | MS.gene99854:intron | 35.0% | |
| ! | GACCATGACCCTAATAATTT+TGG | - | chr2.1:390972-390991 | None:intergenic | 35.0% |
| !! | TGATGGATTCAAGAATGACA+TGG | + | chr2.1:391080-391099 | MS.gene99854:intron | 35.0% |
| ATCGATGCTTTACTTGAGTC+AGG | + | chr2.1:392070-392089 | MS.gene99854:CDS | 40.0% | |
| ATCGTTATCTCTCTTGCACT+TGG | + | chr2.1:391713-391732 | MS.gene99854:intron | 40.0% | |
| ATGTGTCTAACATAGCAGAC+AGG | - | chr2.1:391809-391828 | None:intergenic | 40.0% | |
| ATGTTGGCCAGCAAAAGAAT+TGG | - | chr2.1:391778-391797 | None:intergenic | 40.0% | |
| CAGAACAGAACAGGAGAAAA+AGG | - | chr2.1:390809-390828 | None:intergenic | 40.0% | |
| GATATATAGCATTGCTCGGT+GGG | - | chr2.1:391170-391189 | None:intergenic | 40.0% | |
| GTAGGCTAACTGATGGTAAT+TGG | + | chr2.1:390841-390860 | MS.gene99854:intron | 40.0% | |
| TAGCCAATAAAATCTCAGCC+TGG | + | chr2.1:391229-391248 | MS.gene99854:intron | 40.0% | |
| TAGCCAATAAAATCTCAGCC+TGG | - | chr2.1:391248-391229 | None:intergenic | 40.0% | |
| TCCTGTATTTATTCCTCCAG+AGG | + | chr2.1:390772-390791 | MS.gene99854:CDS | 40.0% | |
| TGATATATAGCATTGCTCGG+TGG | - | chr2.1:391171-391190 | None:intergenic | 40.0% | |
| ! | ACCTCTGGAGGAATAAATAC+AGG | - | chr2.1:390776-390795 | None:intergenic | 40.0% |
| ! | TCTCATGCCAATTCTTTTGC+TGG | + | chr2.1:391768-391787 | MS.gene99854:intron | 40.0% |
| ! | TCTTTTGCTGGCCAACATTT+GGG | + | chr2.1:391780-391799 | MS.gene99854:intron | 40.0% |
| ! | TTCTTTTGCTGGCCAACATT+TGG | + | chr2.1:391779-391798 | MS.gene99854:intron | 40.0% |
| ACAACAGGACAGAACAGAAC+AGG | - | chr2.1:390818-390837 | None:intergenic | 45.0% | |
| CAATAAAATCTCAGCCTGGC+CGG | + | chr2.1:391233-391252 | MS.gene99854:intron | 45.0% | |
| CAGACAGGATACCCAAATGT+TGG | - | chr2.1:391794-391813 | None:intergenic | 45.0% | |
| GGATGACTATTTACCTCTGG+AGG | - | chr2.1:390788-390807 | None:intergenic | 45.0% | |
| TCAGCCTGGCTGAAAATCAT+GGG | - | chr2.1:391413-391432 | None:intergenic | 45.0% | |
| TTCTGTTCTGTCCTGTTGTG+TGG | + | chr2.1:390819-390838 | MS.gene99854:intron | 45.0% | |
| TTGTGTGGTAGGCTAACTGA+TGG | + | chr2.1:390834-390853 | MS.gene99854:intron | 45.0% | |
| ! | CAGCCAGGCTGAGATTTTAT+TGG | + | chr2.1:391421-391440 | MS.gene99854:intron | 45.0% |
| !!! | AGTTGCAAATGTTTTGGGGG+AGG | + | chr2.1:391881-391900 | MS.gene99854:intron | 45.0% |
| CAGCCTGGCTGAAAATCATG+GGG | - | chr2.1:391412-391431 | None:intergenic | 50.0% | |
| CTCAGCCTGGCTGAAAATCA+TGG | - | chr2.1:391414-391433 | None:intergenic | 50.0% | |
| GCTGAAAATCATGGGGTGGT+GGG | - | chr2.1:391405-391424 | None:intergenic | 50.0% | |
| GTTCTGTCCTGTTGTGTGGT+AGG | + | chr2.1:390823-390842 | MS.gene99854:intron | 50.0% | |
| ! | CAGTTAGCCTACCACACAAC+AGG | - | chr2.1:390833-390852 | None:intergenic | 50.0% |
| ! | CGGCCAGGCTGAGATTTTAT+TGG | - | chr2.1:391235-391254 | None:intergenic | 50.0% |
| !! | AAATCATGGGGTGGTGGGTA+CGG | - | chr2.1:391400-391419 | None:intergenic | 50.0% |
| ACCCACCACCCCATGATTTC+CGG | - | chr2.1:391255-391274 | None:intergenic | 55.0% | |
| CCTGGCTGAAAATCATGGGG+TGG | - | chr2.1:391409-391428 | None:intergenic | 55.0% | |
| GGCTGAAAATCATGGGGTGG+TGG | - | chr2.1:391406-391425 | None:intergenic | 55.0% | |
| TCAGCCTGGCCGGAAATCAT+GGG | + | chr2.1:391243-391262 | MS.gene99854:intron | 55.0% | |
| ! | CCACCCCATGATTTTCAGCC+AGG | + | chr2.1:391406-391425 | MS.gene99854:intron | 55.0% |
| CAGCCTGGCCGGAAATCATG+GGG | + | chr2.1:391244-391263 | MS.gene99854:intron | 60.0% | |
| CTCAGCCTGGCCGGAAATCA+TGG | + | chr2.1:391242-391261 | MS.gene99854:intron | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | + | chr2.1:391251-391270 | MS.gene99854:intron | 60.0% | |
| !! | TGGGGTGGTGGGTACGGAAA+AGG | - | chr2.1:391394-391413 | None:intergenic | 60.0% |
| CCACCCCATGATTTCCGGCC+AGG | - | chr2.1:391250-391269 | None:intergenic | 65.0% | |
| CCTGGCCGGAAATCATGGGG+TGG | + | chr2.1:391247-391266 | MS.gene99854:intron | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | + | chr2.1:391250-391269 | MS.gene99854:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 390701 | 392171 | 390701 | ID=MS.gene99854 |
| chr2.1 | mRNA | 390701 | 392171 | 390701 | ID=MS.gene99854.t1;Parent=MS.gene99854 |
| chr2.1 | exon | 390701 | 390793 | 390701 | ID=MS.gene99854.t1.exon1;Parent=MS.gene99854.t1 |
| chr2.1 | CDS | 390701 | 390793 | 390701 | ID=cds.MS.gene99854.t1;Parent=MS.gene99854.t1 |
| chr2.1 | exon | 392064 | 392171 | 392064 | ID=MS.gene99854.t1.exon2;Parent=MS.gene99854.t1 |
| chr2.1 | CDS | 392064 | 392171 | 392064 | ID=cds.MS.gene99854.t1;Parent=MS.gene99854.t1 |
| Gene Sequence |
| Protein sequence |
