Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53143.t1 | XP_024640918.1 | 97.3 | 333 | 9 | 0 | 1 | 333 | 1 | 333 | 3.10E-180 | 641 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53143.t1 | Q67Y99 | 65.5 | 336 | 103 | 4 | 1 | 329 | 1 | 330 | 3.6e-116 | 419.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53143.t1 | A0A396HXQ8 | 97.3 | 333 | 9 | 0 | 1 | 333 | 1 | 333 | 2.3e-180 | 641.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene53143 | 0.844029 | 9.74E-59 | -1.69E-46 |
| MS.gene049150 | MS.gene53143 | 0.890136 | 1.29E-73 | -1.69E-46 |
| MS.gene049151 | MS.gene53143 | 0.858865 | 6.14E-63 | -1.69E-46 |
| MS.gene049153 | MS.gene53143 | 0.884208 | 2.33E-71 | -1.69E-46 |
| MS.gene049260 | MS.gene53143 | 0.841142 | 5.68E-58 | -1.69E-46 |
| MS.gene049297 | MS.gene53143 | 0.807596 | 4.68E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene53143 | 0.826599 | 2.48E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene53143 | 0.84539 | 4.19E-59 | -1.69E-46 |
| MS.gene049351 | MS.gene53143 | 0.811264 | 7.64E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene53143 | 0.833306 | 5.75E-56 | -1.69E-46 |
| MS.gene049378 | MS.gene53143 | 0.837618 | 4.67E-57 | -1.69E-46 |
| MS.gene049426 | MS.gene53143 | 0.806288 | 8.85E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene53143 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene53143 | 0.874631 | 5.81E-68 | -1.69E-46 |
| MS.gene049910 | MS.gene53143 | 0.871647 | 5.83E-67 | -1.69E-46 |
| MS.gene049915 | MS.gene53143 | 0.821783 | 3.36E-53 | -1.69E-46 |
| MS.gene049993 | MS.gene53143 | 0.827816 | 1.27E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene53143 | 0.815478 | 9.06E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene53143 | 0.806431 | 8.25E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene53143 | 0.832976 | 6.95E-56 | -1.69E-46 |
| MS.gene050168 | MS.gene53143 | 0.833279 | 5.84E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene53143 | 0.831112 | 2.01E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene53143 | 0.825102 | 5.63E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene53143 | 0.823354 | 1.45E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene53143 | 0.88449 | 1.83E-71 | -1.69E-46 |
| MS.gene050330 | MS.gene53143 | -0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene53143 | 0.840486 | 8.45E-58 | -1.69E-46 |
| MS.gene050406 | MS.gene53143 | 0.829418 | 5.21E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene53143 | -0.856855 | 2.43E-62 | -1.69E-46 |
| MS.gene050432 | MS.gene53143 | 0.811041 | 8.53E-51 | -1.69E-46 |
| MS.gene050464 | MS.gene53143 | 0.859908 | 2.99E-63 | -1.69E-46 |
| MS.gene050529 | MS.gene53143 | 0.856849 | 2.44E-62 | -1.69E-46 |
| MS.gene050558 | MS.gene53143 | 0.827918 | 1.20E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene53143 | -0.822023 | 2.96E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene53143 | 0.864571 | 1.10E-64 | -1.69E-46 |
| MS.gene050650 | MS.gene53143 | 0.819866 | 9.27E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene53143 | 0.87456 | 6.14E-68 | -1.69E-46 |
| MS.gene050812 | MS.gene53143 | 0.815111 | 1.09E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene53143 | 0.82728 | 1.71E-54 | -1.69E-46 |
| MS.gene050971 | MS.gene53143 | 0.827678 | 1.37E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene53143 | 0.81687 | 4.43E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene53143 | 0.827971 | 1.17E-54 | -1.69E-46 |
| MS.gene05119 | MS.gene53143 | -0.824942 | 6.14E-54 | -1.69E-46 |
| MS.gene051360 | MS.gene53143 | 0.822997 | 1.76E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene53143 | 0.820201 | 7.77E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene53143 | 0.85348 | 2.32E-61 | -1.69E-46 |
| MS.gene051582 | MS.gene53143 | 0.852298 | 5.06E-61 | -1.69E-46 |
| MS.gene051663 | MS.gene53143 | 0.831808 | 1.35E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene53143 | 0.87505 | 4.18E-68 | -1.69E-46 |
| MS.gene051983 | MS.gene53143 | 0.89285 | 1.08E-74 | -1.69E-46 |
| MS.gene052011 | MS.gene53143 | -0.881078 | 3.24E-70 | -1.69E-46 |
| MS.gene052077 | MS.gene53143 | 0.902947 | 5.75E-79 | -1.69E-46 |
| MS.gene052078 | MS.gene53143 | 0.829813 | 4.17E-55 | -1.69E-46 |
| MS.gene052134 | MS.gene53143 | 0.810285 | 1.24E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene53143 | 0.828595 | 8.24E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene53143 | 0.810033 | 1.41E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene53143 | 0.827279 | 1.71E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene53143 | 0.910431 | 1.89E-82 | -1.69E-46 |
| MS.gene052207 | MS.gene53143 | 0.800465 | 1.42E-48 | -1.69E-46 |
| MS.gene052253 | MS.gene53143 | 0.870886 | 1.04E-66 | -1.69E-46 |
| MS.gene052255 | MS.gene53143 | 0.837328 | 5.55E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene53143 | 0.854404 | 1.26E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene53143 | 0.897875 | 9.19E-77 | -1.69E-46 |
| MS.gene052414 | MS.gene53143 | 0.801303 | 9.59E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene53143 | 0.846404 | 2.22E-59 | -1.69E-46 |
| MS.gene053073 | MS.gene53143 | 0.812884 | 3.39E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene53143 | 0.854408 | 1.26E-61 | -1.69E-46 |
| MS.gene053184 | MS.gene53143 | 0.801815 | 7.53E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene53143 | 0.845219 | 4.66E-59 | -1.69E-46 |
| MS.gene053330 | MS.gene53143 | 0.823874 | 1.09E-53 | -1.69E-46 |
| MS.gene053494 | MS.gene53143 | 0.843999 | 9.92E-59 | -1.69E-46 |
| MS.gene053555 | MS.gene53143 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene53143 | 0.855336 | 6.76E-62 | -1.69E-46 |
| MS.gene053559 | MS.gene53143 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene053577 | MS.gene53143 | 0.801174 | 1.02E-48 | -1.69E-46 |
| MS.gene053758 | MS.gene53143 | 0.806532 | 7.86E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene53143 | 0.90829 | 2.01E-81 | -1.69E-46 |
| MS.gene053907 | MS.gene53143 | 0.834954 | 2.22E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene53143 | 0.877697 | 5.11E-69 | -1.69E-46 |
| MS.gene053971 | MS.gene53143 | 0.813098 | 3.04E-51 | -1.69E-46 |
| MS.gene054010 | MS.gene53143 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene53143 | 0.828973 | 6.67E-55 | -1.69E-46 |
| MS.gene054012 | MS.gene53143 | 0.817402 | 3.36E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene53143 | 0.811611 | 6.42E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene53143 | 0.861283 | 1.14E-63 | -1.69E-46 |
| MS.gene054183 | MS.gene53143 | 0.875311 | 3.40E-68 | -1.69E-46 |
| MS.gene054327 | MS.gene53143 | 0.802229 | 6.20E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene53143 | 0.892264 | 1.86E-74 | -1.69E-46 |
| MS.gene054473 | MS.gene53143 | 0.846525 | 2.06E-59 | -1.69E-46 |
| MS.gene054542 | MS.gene53143 | 0.81329 | 2.76E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene53143 | 0.837633 | 4.63E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene53143 | 0.80456 | 2.04E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene53143 | 0.864866 | 8.93E-65 | -1.69E-46 |
| MS.gene054930 | MS.gene53143 | 0.886165 | 4.34E-72 | -1.69E-46 |
| MS.gene054942 | MS.gene53143 | 0.824146 | 9.46E-54 | -1.69E-46 |
| MS.gene054955 | MS.gene53143 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene53143 | 0.848811 | 4.83E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene53143 | 0.877855 | 4.49E-69 | -1.69E-46 |
| MS.gene055277 | MS.gene53143 | 0.854022 | 1.62E-61 | -1.69E-46 |
| MS.gene055358 | MS.gene53143 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene53143 | 0.83095 | 2.20E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene53143 | 0.837598 | 4.73E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene53143 | 0.865135 | 7.36E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene53143 | 0.852621 | 4.09E-61 | -1.69E-46 |
| MS.gene055539 | MS.gene53143 | 0.832206 | 1.08E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene53143 | 0.920149 | 1.84E-87 | -1.69E-46 |
| MS.gene055601 | MS.gene53143 | -0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene53143 | 0.881746 | 1.86E-70 | -1.69E-46 |
| MS.gene055666 | MS.gene53143 | 0.824715 | 6.95E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene53143 | 0.802601 | 5.19E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene53143 | 0.810005 | 1.43E-50 | -1.69E-46 |
| MS.gene055859 | MS.gene53143 | 0.821096 | 4.84E-53 | -1.69E-46 |
| MS.gene05594 | MS.gene53143 | 0.825042 | 5.81E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene53143 | 0.822145 | 2.77E-53 | -1.69E-46 |
| MS.gene056233 | MS.gene53143 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene53143 | 0.889622 | 2.05E-73 | -1.69E-46 |
| MS.gene056447 | MS.gene53143 | 0.823341 | 1.46E-53 | -1.69E-46 |
| MS.gene056451 | MS.gene53143 | 0.805851 | 1.09E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene53143 | 0.806886 | 6.62E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene53143 | 0.816604 | 5.08E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene53143 | 0.865532 | 5.52E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene53143 | 0.892165 | 2.04E-74 | -1.69E-46 |
| MS.gene056723 | MS.gene53143 | 0.888924 | 3.83E-73 | -1.69E-46 |
| MS.gene056796 | MS.gene53143 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene53143 | 0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene056899 | MS.gene53143 | -0.85417 | 1.47E-61 | -1.69E-46 |
| MS.gene056902 | MS.gene53143 | 0.807416 | 5.11E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene53143 | 0.88238 | 1.09E-70 | -1.69E-46 |
| MS.gene05702 | MS.gene53143 | 0.877784 | 4.76E-69 | -1.69E-46 |
| MS.gene057121 | MS.gene53143 | 0.868121 | 8.26E-66 | -1.69E-46 |
| MS.gene057124 | MS.gene53143 | 0.851784 | 7.08E-61 | -1.69E-46 |
| MS.gene057245 | MS.gene53143 | 0.819435 | 1.16E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene53143 | 0.883885 | 3.07E-71 | -1.69E-46 |
| MS.gene057439 | MS.gene53143 | 0.829957 | 3.85E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene53143 | 0.883636 | 3.79E-71 | -1.69E-46 |
| MS.gene057449 | MS.gene53143 | 0.858183 | 9.81E-63 | -1.69E-46 |
| MS.gene057450 | MS.gene53143 | 0.884144 | 2.46E-71 | -1.69E-46 |
| MS.gene057469 | MS.gene53143 | 0.868233 | 7.60E-66 | -1.69E-46 |
| MS.gene057476 | MS.gene53143 | 0.834994 | 2.17E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene53143 | 0.87495 | 4.52E-68 | -1.69E-46 |
| MS.gene057750 | MS.gene53143 | 0.831269 | 1.84E-55 | -1.69E-46 |
| MS.gene057754 | MS.gene53143 | 0.826547 | 2.56E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene53143 | 0.866796 | 2.19E-65 | -1.69E-46 |
| MS.gene057824 | MS.gene53143 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene057825 | MS.gene53143 | 0.82993 | 3.91E-55 | -1.69E-46 |
| MS.gene057826 | MS.gene53143 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene53143 | 0.901206 | 3.39E-78 | -1.69E-46 |
| MS.gene058007 | MS.gene53143 | 0.820364 | 7.13E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene53143 | 0.824943 | 6.14E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene53143 | 0.882482 | 1.00E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene53143 | 0.901562 | 2.36E-78 | -1.69E-46 |
| MS.gene058233 | MS.gene53143 | 0.845207 | 4.69E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene53143 | 0.839542 | 1.49E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene53143 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene53143 | 0.850963 | 1.21E-60 | -1.69E-46 |
| MS.gene05842 | MS.gene53143 | 0.808142 | 3.58E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene53143 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene53143 | 0.845935 | 2.98E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene53143 | 0.830891 | 2.27E-55 | -1.69E-46 |
| MS.gene058710 | MS.gene53143 | 0.880405 | 5.64E-70 | -1.69E-46 |
| MS.gene058749 | MS.gene53143 | 0.848686 | 5.23E-60 | -1.69E-46 |
| MS.gene058833 | MS.gene53143 | 0.802707 | 4.94E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene53143 | 0.81792 | 2.57E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene53143 | 0.874324 | 7.38E-68 | -1.69E-46 |
| MS.gene058928 | MS.gene53143 | 0.853986 | 1.66E-61 | -1.69E-46 |
| MS.gene058948 | MS.gene53143 | 0.806634 | 7.48E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene53143 | 0.87706 | 8.50E-69 | -1.69E-46 |
| MS.gene059011 | MS.gene53143 | 0.849283 | 3.57E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene53143 | 0.899553 | 1.77E-77 | -1.69E-46 |
| MS.gene059082 | MS.gene53143 | 0.817964 | 2.51E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene53143 | 0.809287 | 2.04E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene53143 | 0.825418 | 4.74E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene53143 | 0.886377 | 3.61E-72 | -1.69E-46 |
| MS.gene059294 | MS.gene53143 | 0.845074 | 5.10E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene53143 | 0.84071 | 7.38E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene53143 | 0.907391 | 5.33E-81 | -1.69E-46 |
| MS.gene059462 | MS.gene53143 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene53143 | 0.829181 | 5.94E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene53143 | 0.867413 | 1.39E-65 | -1.69E-46 |
| MS.gene05959 | MS.gene53143 | 0.822756 | 2.00E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene53143 | 0.868691 | 5.41E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene53143 | 0.866856 | 2.10E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene53143 | 0.868691 | 5.41E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene53143 | 0.86537 | 6.20E-65 | -1.69E-46 |
| MS.gene059708 | MS.gene53143 | 0.80369 | 3.09E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene53143 | 0.80987 | 1.53E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene53143 | 0.886075 | 4.69E-72 | -1.69E-46 |
| MS.gene059894 | MS.gene53143 | 0.878771 | 2.14E-69 | -1.69E-46 |
| MS.gene059899 | MS.gene53143 | 0.839671 | 1.38E-57 | -1.69E-46 |
| MS.gene059958 | MS.gene53143 | 0.800316 | 1.53E-48 | -1.69E-46 |
| MS.gene060083 | MS.gene53143 | 0.805322 | 1.41E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene53143 | 0.857539 | 1.52E-62 | -1.69E-46 |
| MS.gene06037 | MS.gene53143 | 0.834862 | 2.34E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene53143 | 0.825881 | 3.68E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene53143 | 0.871179 | 8.33E-67 | -1.69E-46 |
| MS.gene060495 | MS.gene53143 | 0.839018 | 2.04E-57 | -1.69E-46 |
| MS.gene060496 | MS.gene53143 | 0.817128 | 3.87E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene53143 | 0.816045 | 6.77E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene53143 | 0.808012 | 3.82E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene53143 | 0.921519 | 3.22E-88 | -1.69E-46 |
| MS.gene061051 | MS.gene53143 | -0.87088 | 1.04E-66 | -1.69E-46 |
| MS.gene061114 | MS.gene53143 | -0.849208 | 3.75E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene53143 | 0.862652 | 4.35E-64 | -1.69E-46 |
| MS.gene061159 | MS.gene53143 | 0.880706 | 4.40E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53143.t1 | MTR_5g043480 | 91.291 | 333 | 9 | 1 | 1 | 333 | 1 | 313 | 0.0 | 624 |
| MS.gene53143.t1 | MTR_5g043480 | 98.507 | 268 | 4 | 0 | 1 | 268 | 1 | 268 | 0.0 | 546 |
| MS.gene53143.t1 | MTR_5g043480 | 92.149 | 242 | 16 | 1 | 92 | 333 | 5 | 243 | 1.29e-157 | 441 |
| MS.gene53143.t1 | MTR_5g043480 | 92.179 | 179 | 12 | 1 | 90 | 268 | 2 | 178 | 1.69e-105 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53143.t1 | AT2G03390 | 65.476 | 336 | 103 | 4 | 1 | 329 | 1 | 330 | 2.95e-157 | 443 |
| MS.gene53143.t1 | AT2G03390 | 65.476 | 336 | 103 | 4 | 1 | 329 | 1 | 330 | 2.95e-157 | 443 |
| MS.gene53143.t1 | AT2G03390 | 74.661 | 221 | 55 | 1 | 109 | 329 | 1 | 220 | 5.22e-124 | 355 |
| MS.gene53143.t1 | AT2G03390 | 63.273 | 275 | 89 | 3 | 1 | 268 | 1 | 270 | 9.37e-117 | 338 |
| MS.gene53143.t1 | AT2G03390 | 63.273 | 275 | 89 | 3 | 1 | 268 | 1 | 270 | 9.37e-117 | 338 |
| MS.gene53143.t1 | AT2G03390 | 62.357 | 263 | 87 | 3 | 1 | 256 | 1 | 258 | 1.37e-108 | 317 |
| MS.gene53143.t1 | AT2G03390 | 62.357 | 263 | 87 | 3 | 1 | 256 | 1 | 258 | 1.37e-108 | 317 |
Find 62 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCCGCAGTTGCTTAAT+AGG | 0.261631 | 5.4:+32664559 | None:intergenic |
| GTAATATGTGATCGTTTAAA+TGG | 0.273515 | 5.4:+32667824 | None:intergenic |
| GTGAAGAGTTTAGTGTTTAT+TGG | 0.293167 | 5.4:-32667764 | MS.gene53143:CDS |
| AAGAGACTCTGCTTCAAGTT+TGG | 0.332003 | 5.4:+32666150 | None:intergenic |
| CCACTGGAAAACACTTGGTT+TGG | 0.357930 | 5.4:-32667796 | MS.gene53143:CDS |
| CTTACTTTGTCTGGTTTGTC+AGG | 0.359327 | 5.4:+32664723 | None:intergenic |
| TGAAGAGTTTAGTGTTTATT+GGG | 0.360919 | 5.4:-32667763 | MS.gene53143:CDS |
| ATAGATACACTTACTTTGTC+TGG | 0.371506 | 5.4:+32664714 | None:intergenic |
| TTCCCTCCATCTTCGTCACT+TGG | 0.379098 | 5.4:+32664499 | None:intergenic |
| GTGGGTTAAACGGTATTTCA+TGG | 0.383209 | 5.4:+32664521 | None:intergenic |
| GAAGCGGGATGGATGTTTAG+AGG | 0.384346 | 5.4:-32667701 | MS.gene53143:CDS |
| TCTCCCGCAGTTGCTTAATA+GGG | 0.393158 | 5.4:+32664560 | None:intergenic |
| CTTCTTTGCCTCGACGCAAA+AGG | 0.393306 | 5.4:+32667737 | None:intergenic |
| GCACAATATGTCTTCCGCTT+GGG | 0.393631 | 5.4:-32666094 | MS.gene53143:CDS |
| AAAGTAAAGCATAAAATGTT+TGG | 0.407562 | 5.4:-32666067 | MS.gene53143:intron |
| TGCTGCATCAGCTAAAGCTT+TGG | 0.408060 | 5.4:-32666128 | MS.gene53143:CDS |
| CCTCCATCTTCGTCACTTGG+TGG | 0.409997 | 5.4:+32664502 | None:intergenic |
| TGTGGAAAGAGCAGAATCTA+TGG | 0.413201 | 5.4:-32667860 | MS.gene53143:CDS |
| CCATATGCCACCAGTAGATC+TGG | 0.419863 | 5.4:+32665223 | None:intergenic |
| GAACTTGATTCACTGCATAC+TGG | 0.426333 | 5.4:+32665873 | None:intergenic |
| TCGTCACTTGGTGGGTTAAA+CGG | 0.427367 | 5.4:+32664511 | None:intergenic |
| TATGCAGTGAATCAAGTTCA+TGG | 0.439684 | 5.4:-32665869 | MS.gene53143:CDS |
| TAGAGGTGGAGAACAAGAGT+TGG | 0.460891 | 5.4:-32667684 | MS.gene53143:CDS |
| CTCTAAGTATTATACGTCTT+CGG | 0.463511 | 5.4:-32666495 | MS.gene53143:intron |
| CTCCATCTTCGTCACTTGGT+GGG | 0.467410 | 5.4:+32664503 | None:intergenic |
| TGCACAATATGTCTTCCGCT+TGG | 0.468704 | 5.4:-32666095 | MS.gene53143:CDS |
| GCTAATCAAACCTGATAAAA+CGG | 0.469627 | 5.4:+32665801 | None:intergenic |
| CCAGATCTACTGGTGGCATA+TGG | 0.477740 | 5.4:-32665223 | MS.gene53143:intron |
| ATCACGTAATTTAGCAGCCA+AGG | 0.491405 | 5.4:+32666180 | None:intergenic |
| TTCTTTGCCTCGACGCAAAA+GGG | 0.495290 | 5.4:+32667738 | None:intergenic |
| ATCTGCCACTGGAAAACACT+TGG | 0.501894 | 5.4:-32667801 | MS.gene53143:CDS |
| CACAATATGTCTTCCGCTTG+GGG | 0.503833 | 5.4:-32666093 | MS.gene53143:CDS |
| TTCTATGGAATGGATTCAGC+TGG | 0.505006 | 5.4:-32664592 | MS.gene53143:CDS |
| TTTATGAAAGGTTGAAGAAG+AGG | 0.509905 | 5.4:-32666578 | MS.gene53143:intron |
| TAGAACAGAAAAGACATGTA+GGG | 0.523219 | 5.4:+32664610 | None:intergenic |
| CATCCCTATTAAGCAACTGC+GGG | 0.535038 | 5.4:-32664563 | MS.gene53143:CDS |
| TGATCGTTTAAATGGCTCAA+AGG | 0.535551 | 5.4:+32667832 | None:intergenic |
| GCGTGCTGAACCAGATCTAC+TGG | 0.535872 | 5.4:-32665233 | MS.gene53143:CDS |
| TAGAGCTATAATCGTAGGAA+TGG | 0.538085 | 5.4:-32665898 | MS.gene53143:CDS |
| CAGTGAATCAAGTTCATGGA+TGG | 0.538216 | 5.4:-32665865 | MS.gene53143:CDS |
| GATCGTTTAAATGGCTCAAA+GGG | 0.543938 | 5.4:+32667833 | None:intergenic |
| GGATTTAGCCACAAGAGTGC+AGG | 0.557260 | 5.4:-32667600 | MS.gene53143:intron |
| ATAGAACAGAAAAGACATGT+AGG | 0.565791 | 5.4:+32664609 | None:intergenic |
| GGCTATAGAGCTATAATCGT+AGG | 0.576059 | 5.4:-32665903 | MS.gene53143:CDS |
| TCACATATTACATCTGCCAC+TGG | 0.578536 | 5.4:-32667812 | MS.gene53143:CDS |
| CAGCTACACCTGCACTCTTG+TGG | 0.590788 | 5.4:+32667592 | None:intergenic |
| CACCAAGTGACGAAGATGGA+GGG | 0.596119 | 5.4:-32664501 | MS.gene53143:CDS |
| CGAGAATGAAGATTATGCCT+TGG | 0.601977 | 5.4:-32666197 | MS.gene53143:CDS |
| GCGGGATGGATGTTTAGAGG+TGG | 0.602771 | 5.4:-32667698 | MS.gene53143:CDS |
| AACCCACCAAGTGACGAAGA+TGG | 0.610200 | 5.4:-32664505 | MS.gene53143:CDS |
| TTTGCGTCGAGGCAAAGAAG+TGG | 0.638489 | 5.4:-32667734 | MS.gene53143:CDS |
| AGAACAGAAAAGACATGTAG+GGG | 0.640432 | 5.4:+32664611 | None:intergenic |
| TTAAACGGTATTTCATGGCG+CGG | 0.645858 | 5.4:+32664526 | None:intergenic |
| TCATCCCTATTAAGCAACTG+CGG | 0.646965 | 5.4:-32664564 | MS.gene53143:CDS |
| ATGTCAGTGTGCTTTAAACA+TGG | 0.651748 | 5.4:-32667308 | MS.gene53143:intron |
| GCTTTACTTTCTGCCCCAAG+CGG | 0.652168 | 5.4:+32666080 | None:intergenic |
| CCACCAAGTGACGAAGATGG+AGG | 0.661045 | 5.4:-32664502 | MS.gene53143:CDS |
| TTGAGCACACTAGCAACATG+TGG | 0.672596 | 5.4:-32667878 | MS.gene53143:CDS |
| AACCTGATAAAACGGTTGAG+CGG | 0.677732 | 5.4:+32665809 | None:intergenic |
| TGCTGAACCAGATCTACTGG+TGG | 0.685041 | 5.4:-32665230 | MS.gene53143:CDS |
| CAAGTTAAGAAGTTGTCTCG+TGG | 0.688846 | 5.4:-32665834 | MS.gene53143:CDS |
| GCTGCGAAACAAACTTACTG+AGG | 0.697627 | 5.4:-32667263 | MS.gene53143:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTAATTTTAAATGTAAC+TGG | + | chr5.4:32667515-32667534 | None:intergenic | 10.0% |
| !!! | ATTATTACCTAATAATTTTA+AGG | - | chr5.4:32666666-32666685 | MS.gene53143:intron | 10.0% |
| !!! | TTATTACCTAATAATTTTAA+GGG | - | chr5.4:32666667-32666686 | MS.gene53143:intron | 10.0% |
| !! | TGATAAATATTGTTTATGAA+AGG | - | chr5.4:32665798-32665817 | MS.gene53143:intron | 15.0% |
| !!! | ACTCAAAATCTTTTATATTA+TGG | - | chr5.4:32664942-32664961 | MS.gene53143:intron | 15.0% |
| !!! | TAATAATTTGTTGTATTGAT+AGG | + | chr5.4:32666365-32666384 | None:intergenic | 15.0% |
| !!! | TCTTCAATTTTTATTATTAC+TGG | - | chr5.4:32666898-32666917 | MS.gene53143:intron | 15.0% |
| !! | AAAGTAAAGCATAAAATGTT+TGG | - | chr5.4:32666321-32666340 | MS.gene53143:intron | 20.0% |
| !! | AATTTATGTAATCAATGCAT+TGG | + | chr5.4:32666777-32666796 | None:intergenic | 20.0% |
| !! | ATTTCTTCATCATTTATTCT+AGG | - | chr5.4:32665920-32665939 | MS.gene53143:intron | 20.0% |
| !! | CTTTATATTGCAAGAAAATA+TGG | - | chr5.4:32664879-32664898 | MS.gene53143:intron | 20.0% |
| !! | TAAGCAAAAACAATCAAAAA+GGG | - | chr5.4:32665837-32665856 | MS.gene53143:CDS | 20.0% |
| !! | TACAAAAAGAAAAACAGATA+AGG | + | chr5.4:32667050-32667069 | None:intergenic | 20.0% |
| !! | TCATAAGAAGTTACTATTTA+AGG | - | chr5.4:32666798-32666817 | MS.gene53143:intron | 20.0% |
| !! | TGCGTATAAAGTTAAAATTA+GGG | + | chr5.4:32666861-32666880 | None:intergenic | 20.0% |
| !! | TTAAGCAAAAACAATCAAAA+AGG | - | chr5.4:32665836-32665855 | MS.gene53143:CDS | 20.0% |
| !!! | CATATTTTCTTGCAATATAA+AGG | + | chr5.4:32664881-32664900 | None:intergenic | 20.0% |
| !!! | GACTAGAATGATTTTATATT+AGG | + | chr5.4:32665472-32665491 | None:intergenic | 20.0% |
| !!! | TGAATTATTCTGTTTCTATA+TGG | - | chr5.4:32666634-32666653 | MS.gene53143:intron | 20.0% |
| !!! | TGTTATTTCTGCTATTTAAT+TGG | - | chr5.4:32667720-32667739 | MS.gene53143:CDS | 20.0% |
| !!! | TTAGTCTTTTATACATAACA+TGG | - | chr5.4:32664830-32664849 | MS.gene53143:intron | 20.0% |
| !!! | TTTAAATGTAACTGGTTTAA+GGG | + | chr5.4:32667507-32667526 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTGTATTAATAGC+TGG | - | chr5.4:32667058-32667077 | MS.gene53143:intron | 20.0% |
| !!! | TTTTAAATGTAACTGGTTTA+AGG | + | chr5.4:32667508-32667527 | None:intergenic | 20.0% |
| ! | AAATATAATGTGAGACTGTT+TGG | + | chr5.4:32667401-32667420 | None:intergenic | 25.0% |
| ! | AAGCAAAAACAATCAAAAAG+GGG | - | chr5.4:32665838-32665857 | MS.gene53143:CDS | 25.0% |
| ! | AATATAATGTGAGACTGTTT+GGG | + | chr5.4:32667400-32667419 | None:intergenic | 25.0% |
| ! | CTGCGTATAAAGTTAAAATT+AGG | + | chr5.4:32666862-32666881 | None:intergenic | 25.0% |
| ! | GTAATATGTGATCGTTTAAA+TGG | + | chr5.4:32664567-32664586 | None:intergenic | 25.0% |
| ! | TACTAAATGTTGTCAAATAG+TGG | - | chr5.4:32665341-32665360 | MS.gene53143:intron | 25.0% |
| ! | TCTTGTATGCAAAAAGAATA+TGG | - | chr5.4:32666991-32667010 | MS.gene53143:intron | 25.0% |
| ! | TGAAGAGTTTAGTGTTTATT+GGG | - | chr5.4:32664625-32664644 | MS.gene53143:CDS | 25.0% |
| ! | TTCAAGTATGATGTAGAATT+CGG | - | chr5.4:32665432-32665451 | MS.gene53143:intron | 25.0% |
| ! | TTCTTAATGCTTCATTTGTT+TGG | - | chr5.4:32665048-32665067 | MS.gene53143:intron | 25.0% |
| !!! | TACTTTTCAAGTTTTGTCAA+TGG | - | chr5.4:32665610-32665629 | MS.gene53143:intron | 25.0% |
| !!! | TTTCATGAGTTATTTTAGAG+AGG | - | chr5.4:32667317-32667336 | MS.gene53143:intron | 25.0% |
| ACTTATGACACTTCATAATC+CGG | + | chr5.4:32667361-32667380 | None:intergenic | 30.0% | |
| AGAACCTAGACATTTGAAAA+AGG | + | chr5.4:32667126-32667145 | None:intergenic | 30.0% | |
| AGCTGAATATCTCATAAATG+TGG | - | chr5.4:32666413-32666432 | MS.gene53143:intron | 30.0% | |
| AGGAATCAAAATATGAGGAA+AGG | + | chr5.4:32666451-32666470 | None:intergenic | 30.0% | |
| ATAGAACAGAAAAGACATGT+AGG | + | chr5.4:32667782-32667801 | None:intergenic | 30.0% | |
| ATAGATACACTTACTTTGTC+TGG | + | chr5.4:32667677-32667696 | None:intergenic | 30.0% | |
| ATCTGAAAACATATACACGA+AGG | + | chr5.4:32665731-32665750 | None:intergenic | 30.0% | |
| ATGTACAGAAAAACAGTTGT+AGG | + | chr5.4:32667474-32667493 | None:intergenic | 30.0% | |
| ATTCTAGTCAAATCGAAGTT+TGG | - | chr5.4:32665483-32665502 | MS.gene53143:intron | 30.0% | |
| CACTACTTAACTGTTTATCA+TGG | + | chr5.4:32665000-32665019 | None:intergenic | 30.0% | |
| CAGTCTCACATTATATTTGA+TGG | - | chr5.4:32667403-32667422 | MS.gene53143:intron | 30.0% | |
| CTCTAAGTATTATACGTCTT+CGG | - | chr5.4:32665893-32665912 | MS.gene53143:CDS | 30.0% | |
| GAACCTAGACATTTGAAAAA+GGG | + | chr5.4:32667125-32667144 | None:intergenic | 30.0% | |
| GCAAGACCCTTAAAATTATT+AGG | + | chr5.4:32666676-32666695 | None:intergenic | 30.0% | |
| GCTAATCAAACCTGATAAAA+CGG | + | chr5.4:32666590-32666609 | None:intergenic | 30.0% | |
| GGATACTATAACAGTATTAG+TGG | + | chr5.4:32665164-32665183 | None:intergenic | 30.0% | |
| GTGAAGAGTTTAGTGTTTAT+TGG | - | chr5.4:32664624-32664643 | MS.gene53143:CDS | 30.0% | |
| TAGAACAGAAAAGACATGTA+GGG | + | chr5.4:32667781-32667800 | None:intergenic | 30.0% | |
| TAGACACTATGTAACAACAT+TGG | + | chr5.4:32665263-32665282 | None:intergenic | 30.0% | |
| TATTATTACTTCATTGCCGT+TGG | - | chr5.4:32667532-32667551 | MS.gene53143:intron | 30.0% | |
| TCTGAAAACATATACACGAA+GGG | + | chr5.4:32665730-32665749 | None:intergenic | 30.0% | |
| TTATATTATGGCTGCAATTG+TGG | - | chr5.4:32664954-32664973 | MS.gene53143:intron | 30.0% | |
| TTCAGATCATCTAATGTTTC+TGG | - | chr5.4:32665744-32665763 | MS.gene53143:intron | 30.0% | |
| TTTATGAAAGGTTGAAGAAG+AGG | - | chr5.4:32665810-32665829 | MS.gene53143:intron | 30.0% | |
| ! | AAAAGTATATGTGCGTGTTT+GGG | + | chr5.4:32665597-32665616 | None:intergenic | 30.0% |
| ! | GTGCTTTATAACTGTTTTCA+GGG | - | chr5.4:32667742-32667761 | MS.gene53143:CDS | 30.0% |
| ! | TACATGTCTTTTCTGTTCTA+TGG | - | chr5.4:32667781-32667800 | MS.gene53143:CDS | 30.0% |
| ! | TGAAAATCATGTTTTCTCAG+AGG | - | chr5.4:32665543-32665562 | MS.gene53143:intron | 30.0% |
| !! | AACTCAGCTATTTTCACATT+TGG | + | chr5.4:32666010-32666029 | None:intergenic | 30.0% |
| !! | CATAACATGGCTTTAAATTG+TGG | - | chr5.4:32664843-32664862 | MS.gene53143:intron | 30.0% |
| !! | TCATCTAATGTTTCTGGTAT+TGG | - | chr5.4:32665750-32665769 | MS.gene53143:intron | 30.0% |
| !! | TTATCAGGTTTGATTAGCTT+CGG | - | chr5.4:32666592-32666611 | MS.gene53143:intron | 30.0% |
| !!! | CTTGATGTTCTTTTTTCAAC+TGG | - | chr5.4:32664767-32664786 | MS.gene53143:intron | 30.0% |
| !!! | GAGTTATTTTAGAGAGGTTA+TGG | - | chr5.4:32667323-32667342 | MS.gene53143:intron | 30.0% |
| !!! | TTTCCCTTTTTCAAATGTCT+AGG | - | chr5.4:32667119-32667138 | MS.gene53143:intron | 30.0% |
| AAGCTGACCAACAGATTATA+CGG | + | chr5.4:32666114-32666133 | None:intergenic | 35.0% | |
| ACGAAATTGTTCATCCAAAC+AGG | + | chr5.4:32667210-32667229 | None:intergenic | 35.0% | |
| AGAACAGAAAAGACATGTAG+GGG | + | chr5.4:32667780-32667799 | None:intergenic | 35.0% | |
| AGACAACACAATGCTTCATT+TGG | - | chr5.4:32666950-32666969 | MS.gene53143:intron | 35.0% | |
| AGTGATTAAGTGTGTGTGTT+TGG | - | chr5.4:32665956-32665975 | MS.gene53143:intron | 35.0% | |
| AGTGTCTATACGTTACAACA+TGG | - | chr5.4:32665275-32665294 | MS.gene53143:intron | 35.0% | |
| CATCGAGGAATCAAAATATG+AGG | + | chr5.4:32666456-32666475 | None:intergenic | 35.0% | |
| CGAAATTGTTCATCCAAACA+GGG | + | chr5.4:32667209-32667228 | None:intergenic | 35.0% | |
| GAAAAAGGGAAACCAATCAA+AGG | + | chr5.4:32667111-32667130 | None:intergenic | 35.0% | |
| GAAAGAAACCAAGAACAACA+CGG | + | chr5.4:32667576-32667595 | None:intergenic | 35.0% | |
| GATCGTTTAAATGGCTCAAA+GGG | + | chr5.4:32664558-32664577 | None:intergenic | 35.0% | |
| GTTATGGAAAAAGCTGAAAC+CGG | - | chr5.4:32667339-32667358 | MS.gene53143:intron | 35.0% | |
| TACGGAGGAAAGACAAAAAT+TGG | + | chr5.4:32666096-32666115 | None:intergenic | 35.0% | |
| TAGAGCTATAATCGTAGGAA+TGG | - | chr5.4:32666490-32666509 | MS.gene53143:intron | 35.0% | |
| TAGTGCATCTGTCATATCTA+TGG | - | chr5.4:32665020-32665039 | MS.gene53143:intron | 35.0% | |
| TATGCAGTGAATCAAGTTCA+TGG | - | chr5.4:32666519-32666538 | MS.gene53143:CDS | 35.0% | |
| TGATCGTTTAAATGGCTCAA+AGG | + | chr5.4:32664559-32664578 | None:intergenic | 35.0% | |
| ! | AAATGATAATGAGTGCCCTA+AGG | + | chr5.4:32666838-32666857 | None:intergenic | 35.0% |
| ! | AATGATAATGAGTGCCCTAA+GGG | + | chr5.4:32666837-32666856 | None:intergenic | 35.0% |
| ! | ATGTCAGTGTGCTTTAAACA+TGG | - | chr5.4:32665080-32665099 | MS.gene53143:intron | 35.0% |
| ! | GAAAAGTATATGTGCGTGTT+TGG | + | chr5.4:32665598-32665617 | None:intergenic | 35.0% |
| ! | GGTGCTTTATAACTGTTTTC+AGG | - | chr5.4:32667741-32667760 | MS.gene53143:CDS | 35.0% |
| ! | GTCTTTTCTGTTCTATGGAA+TGG | - | chr5.4:32667786-32667805 | MS.gene53143:CDS | 35.0% |
| ! | TGAGTTGAACTGATGTTTGA+GGG | - | chr5.4:32666024-32666043 | MS.gene53143:intron | 35.0% |
| !! | AATCCTTAAAGAGTGCCTTT+AGG | + | chr5.4:32666709-32666728 | None:intergenic | 35.0% |
| !! | ATCCTTAAAGAGTGCCTTTA+GGG | + | chr5.4:32666708-32666727 | None:intergenic | 35.0% |
| !!! | AAGTGGTTTTAAGGTTGAAG+CGG | - | chr5.4:32664671-32664690 | MS.gene53143:intron | 35.0% |
| AACCTGATAAAACGGTTGAG+CGG | + | chr5.4:32666582-32666601 | None:intergenic | 40.0% | |
| ACGTTGTCAATCGCAAATTG+CGG | + | chr5.4:32665396-32665415 | None:intergenic | 40.0% | |
| ACTCATACCACAGAAACCAA+CGG | + | chr5.4:32667551-32667570 | None:intergenic | 40.0% | |
| ATATGTGCGTGTTTGGGTAA+AGG | + | chr5.4:32665591-32665610 | None:intergenic | 40.0% | |
| ATCACGTAATTTAGCAGCCA+AGG | + | chr5.4:32666211-32666230 | None:intergenic | 40.0% | |
| ATCTGAACTGCAAGCGAAAT+TGG | + | chr5.4:32666157-32666176 | None:intergenic | 40.0% | |
| CAAGTTAAGAAGTTGTCTCG+TGG | - | chr5.4:32666554-32666573 | MS.gene53143:CDS | 40.0% | |
| CAATTTGCGATTGACAACGT+TGG | - | chr5.4:32665396-32665415 | MS.gene53143:intron | 40.0% | |
| CACACACATCTACTTCAAGT+AGG | + | chr5.4:32665219-32665238 | None:intergenic | 40.0% | |
| CAGTGAATCAAGTTCATGGA+TGG | - | chr5.4:32666523-32666542 | MS.gene53143:CDS | 40.0% | |
| CGAGAATGAAGATTATGCCT+TGG | - | chr5.4:32666191-32666210 | MS.gene53143:CDS | 40.0% | |
| CTCTCGATAACTTGAATCGA+TGG | - | chr5.4:32665681-32665700 | MS.gene53143:intron | 40.0% | |
| CTTTCCTCCGTATAATCTGT+TGG | - | chr5.4:32666104-32666123 | MS.gene53143:CDS | 40.0% | |
| GAAAATAAGCTCACTCTAGC+TGG | - | chr5.4:32666070-32666089 | MS.gene53143:CDS | 40.0% | |
| GAACTGTTCAGACCTTTGAT+TGG | - | chr5.4:32667096-32667115 | MS.gene53143:intron | 40.0% | |
| GAACTTGATTCACTGCATAC+TGG | + | chr5.4:32666518-32666537 | None:intergenic | 40.0% | |
| GAGTTGAACTGATGTTTGAG+GGG | - | chr5.4:32666025-32666044 | MS.gene53143:intron | 40.0% | |
| GGCTATAGAGCTATAATCGT+AGG | - | chr5.4:32666485-32666504 | MS.gene53143:intron | 40.0% | |
| GTGTGTGTTTGGTTATGCAT+TGG | - | chr5.4:32665967-32665986 | MS.gene53143:intron | 40.0% | |
| TAAACACAATCCACATGGCT+TGG | + | chr5.4:32665191-32665210 | None:intergenic | 40.0% | |
| TATGGTAAAGCTGGACTACT+AGG | - | chr5.4:32667183-32667202 | MS.gene53143:intron | 40.0% | |
| TATGTGCGTGTTTGGGTAAA+GGG | + | chr5.4:32665590-32665609 | None:intergenic | 40.0% | |
| TCACATATTACATCTGCCAC+TGG | - | chr5.4:32664576-32664595 | MS.gene53143:CDS | 40.0% | |
| TCATCCCTATTAAGCAACTG+CGG | - | chr5.4:32667824-32667843 | MS.gene53143:CDS | 40.0% | |
| TCGCAAATTGCGGAAAATAG+AGG | + | chr5.4:32665386-32665405 | None:intergenic | 40.0% | |
| TGAATCGATGGCAAGTGTAT+TGG | - | chr5.4:32665693-32665712 | MS.gene53143:intron | 40.0% | |
| TGCAAGAAAATATGGCTGTG+CGG | - | chr5.4:32664887-32664906 | MS.gene53143:intron | 40.0% | |
| TGTCTGATGATCTATTCTGC+AGG | + | chr5.4:32666935-32666954 | None:intergenic | 40.0% | |
| TGTGGAAAGAGCAGAATCTA+TGG | - | chr5.4:32664528-32664547 | MS.gene53143:CDS | 40.0% | |
| TTAAACGGTATTTCATGGCG+CGG | + | chr5.4:32667865-32667884 | None:intergenic | 40.0% | |
| ! | AAGAGACTCTGCTTCAAGTT+TGG | + | chr5.4:32666241-32666260 | None:intergenic | 40.0% |
| ! | ATGAGTTTCCGTGTTGTTCT+TGG | - | chr5.4:32667565-32667584 | MS.gene53143:intron | 40.0% |
| ! | ATTCAAGTTATCGAGAGGCT+AGG | + | chr5.4:32665678-32665697 | None:intergenic | 40.0% |
| ! | ATTTTCACATTTGGACGCTC+TGG | + | chr5.4:32666001-32666020 | None:intergenic | 40.0% |
| ! | CTGAGTTGAACTGATGTTTG+AGG | - | chr5.4:32666023-32666042 | MS.gene53143:intron | 40.0% |
| ! | CTTACTTTGTCTGGTTTGTC+AGG | + | chr5.4:32667668-32667687 | None:intergenic | 40.0% |
| ! | GTGGGTTAAACGGTATTTCA+TGG | + | chr5.4:32667870-32667889 | None:intergenic | 40.0% |
| ! | TTATAGCTCTATAGCCTGCA+TGG | + | chr5.4:32666481-32666500 | None:intergenic | 40.0% |
| ! | TTCAAGTTATCGAGAGGCTA+GGG | + | chr5.4:32665677-32665696 | None:intergenic | 40.0% |
| ! | TTCTATGGAATGGATTCAGC+TGG | - | chr5.4:32667796-32667815 | MS.gene53143:CDS | 40.0% |
| !! | CATCGATTCAAGTTATCGAG+AGG | + | chr5.4:32665683-32665702 | None:intergenic | 40.0% |
| !! | GAGGCAAAGAAGTGGTTTTA+AGG | - | chr5.4:32664662-32664681 | MS.gene53143:intron | 40.0% |
| !! | GTGCTTAAAGAGTACCCTTA+GGG | - | chr5.4:32666820-32666839 | MS.gene53143:intron | 40.0% |
| !! | TCTGGTATTGGAGCATTGAA+TGG | - | chr5.4:32665762-32665781 | MS.gene53143:intron | 40.0% |
| !!! | AGTGGTTTTAAGGTTGAAGC+GGG | - | chr5.4:32664672-32664691 | MS.gene53143:intron | 40.0% |
| ACATCTACTTCAAGTAGGCC+TGG | + | chr5.4:32665214-32665233 | None:intergenic | 45.0% | |
| ATCTGCCACTGGAAAACACT+TGG | - | chr5.4:32664587-32664606 | MS.gene53143:CDS | 45.0% | |
| CACAATATGTCTTCCGCTTG+GGG | - | chr5.4:32666295-32666314 | MS.gene53143:intron | 45.0% | |
| CATCCCTATTAAGCAACTGC+GGG | - | chr5.4:32667825-32667844 | MS.gene53143:CDS | 45.0% | |
| CCACTGGAAAACACTTGGTT+TGG | - | chr5.4:32664592-32664611 | MS.gene53143:CDS | 45.0% | |
| CCTGGTAAACACAATCCACA+TGG | + | chr5.4:32665196-32665215 | None:intergenic | 45.0% | |
| CTCTGCAACTGCAAAAGAGA+AGG | + | chr5.4:32667630-32667649 | None:intergenic | 45.0% | |
| CTGACCAACAGATTATACGG+AGG | + | chr5.4:32666111-32666130 | None:intergenic | 45.0% | |
| GCACAATATGTCTTCCGCTT+GGG | - | chr5.4:32666294-32666313 | MS.gene53143:intron | 45.0% | |
| GCTGCGAAACAAACTTACTG+AGG | - | chr5.4:32665125-32665144 | MS.gene53143:intron | 45.0% | |
| GTATCCTATACCAAGCCATG+TGG | - | chr5.4:32665178-32665197 | MS.gene53143:intron | 45.0% | |
| TAGAGGTGGAGAACAAGAGT+TGG | - | chr5.4:32664704-32664723 | MS.gene53143:intron | 45.0% | |
| TCTCCCGCAGTTGCTTAATA+GGG | + | chr5.4:32667831-32667850 | None:intergenic | 45.0% | |
| TGAACTGATGTTTGAGGGGT+TGG | - | chr5.4:32666029-32666048 | MS.gene53143:intron | 45.0% | |
| TGCACAATATGTCTTCCGCT+TGG | - | chr5.4:32666293-32666312 | MS.gene53143:intron | 45.0% | |
| TGCGCGAAAGATTAGATGAG+TGG | + | chr5.4:32667431-32667450 | None:intergenic | 45.0% | |
| TGCTGCATCAGCTAAAGCTT+TGG | - | chr5.4:32666260-32666279 | MS.gene53143:intron | 45.0% | |
| TTCTCCCGCAGTTGCTTAAT+AGG | + | chr5.4:32667832-32667851 | None:intergenic | 45.0% | |
| TTCTTTGCCTCGACGCAAAA+GGG | + | chr5.4:32664653-32664672 | None:intergenic | 45.0% | |
| TTGAGCACACTAGCAACATG+TGG | - | chr5.4:32664510-32664529 | MS.gene53143:CDS | 45.0% | |
| ! | CCAAACCAAGTGTTTTCCAG+TGG | + | chr5.4:32664595-32664614 | None:intergenic | 45.0% |
| ! | CCATGTGGATTGTGTTTACC+AGG | - | chr5.4:32665193-32665212 | MS.gene53143:intron | 45.0% |
| ! | CTTCTCTTTTGCAGTTGCAG+AGG | - | chr5.4:32667628-32667647 | MS.gene53143:CDS | 45.0% |
| ! | TACCGCTCAACCGTTTTATC+AGG | - | chr5.4:32666577-32666596 | MS.gene53143:intron | 45.0% |
| ! | TCGATGGCAAGTGTATTGGT+CGG | - | chr5.4:32665697-32665716 | MS.gene53143:intron | 45.0% |
| !! | CAATCCACATGGCTTGGTAT+AGG | + | chr5.4:32665185-32665204 | None:intergenic | 45.0% |
| !! | GGTGCTTAAAGAGTACCCTT+AGG | - | chr5.4:32666819-32666838 | MS.gene53143:intron | 45.0% |
| !! | TCGTCACTTGGTGGGTTAAA+CGG | + | chr5.4:32667880-32667899 | None:intergenic | 45.0% |
| !! | TGCCCTAAAGGCACTCTTTA+AGG | - | chr5.4:32666703-32666722 | MS.gene53143:intron | 45.0% |
| !! | TTCATTGCCGTTGGTTTCTG+TGG | - | chr5.4:32667541-32667560 | MS.gene53143:intron | 45.0% |
| !!! | GTTTTAAGGTTGAAGCGGGA+TGG | - | chr5.4:32664676-32664695 | MS.gene53143:intron | 45.0% |
| !! | AAATTATTATTAAATTTAAC+TGG | - | chr5.4:32666376-32666395 | MS.gene53143:intron | 5.0% |
| !!! | AAATAAATATTTTCTTAATT+TGG | + | chr5.4:32666732-32666751 | None:intergenic | 5.0% |
| AACCCACCAAGTGACGAAGA+TGG | - | chr5.4:32667883-32667902 | MS.gene53143:CDS | 50.0% | |
| ATAGCCTGCATGGTACATCG+AGG | + | chr5.4:32666471-32666490 | None:intergenic | 50.0% | |
| CACCAAGTGACGAAGATGGA+GGG | - | chr5.4:32667887-32667906 | MS.gene53143:CDS | 50.0% | |
| CCAGATCTACTGGTGGCATA+TGG | - | chr5.4:32667165-32667184 | MS.gene53143:intron | 50.0% | |
| CCATATGCCACCAGTAGATC+TGG | + | chr5.4:32667168-32667187 | None:intergenic | 50.0% | |
| CTCCATCTTCGTCACTTGGT+GGG | + | chr5.4:32667888-32667907 | None:intergenic | 50.0% | |
| CTGGTGGCATATGGTAAAGC+TGG | - | chr5.4:32667174-32667193 | MS.gene53143:intron | 50.0% | |
| CTTCTTTGCCTCGACGCAAA+AGG | + | chr5.4:32664654-32664673 | None:intergenic | 50.0% | |
| CTTGCTAACGAGTGCCCTAA+AGG | - | chr5.4:32666691-32666710 | MS.gene53143:intron | 50.0% | |
| GAAGCGGGATGGATGTTTAG+AGG | - | chr5.4:32664687-32664706 | MS.gene53143:intron | 50.0% | |
| GAGAGGCTAGGGTCATACAA+GGG | + | chr5.4:32665666-32665685 | None:intergenic | 50.0% | |
| GATTCCTCGATGTACCATGC+AGG | - | chr5.4:32666464-32666483 | MS.gene53143:intron | 50.0% | |
| GCTTTACTTTCTGCCCCAAG+CGG | + | chr5.4:32666311-32666330 | None:intergenic | 50.0% | |
| TGCGTGTTTGGGTAAAGGGT+GGG | + | chr5.4:32665586-32665605 | None:intergenic | 50.0% | |
| TGCTGAACCAGATCTACTGG+TGG | - | chr5.4:32667158-32667177 | MS.gene53143:intron | 50.0% | |
| TGGCTGTGCGGTTGAAATTG+TGG | - | chr5.4:32664899-32664918 | MS.gene53143:intron | 50.0% | |
| TTCCCTCCATCTTCGTCACT+TGG | + | chr5.4:32667892-32667911 | None:intergenic | 50.0% | |
| TTGTGGTTGCGATGCTGATG+TGG | - | chr5.4:32664916-32664935 | MS.gene53143:intron | 50.0% | |
| TTTGCGTCGAGGCAAAGAAG+TGG | - | chr5.4:32664654-32664673 | MS.gene53143:intron | 50.0% | |
| ! | GGATTTAGCCACAAGAGTGC+AGG | - | chr5.4:32664788-32664807 | MS.gene53143:intron | 50.0% |
| CAGCTACACCTGCACTCTTG+TGG | + | chr5.4:32664799-32664818 | None:intergenic | 55.0% | |
| CCACCAAGTGACGAAGATGG+AGG | - | chr5.4:32667886-32667905 | MS.gene53143:CDS | 55.0% | |
| CCTCCATCTTCGTCACTTGG+TGG | + | chr5.4:32667889-32667908 | None:intergenic | 55.0% | |
| CGAGAGGCTAGGGTCATACA+AGG | + | chr5.4:32665667-32665686 | None:intergenic | 55.0% | |
| CTGGACTACTAGGCCCTGTT+TGG | - | chr5.4:32667193-32667212 | MS.gene53143:intron | 55.0% | |
| GCGGGATGGATGTTTAGAGG+TGG | - | chr5.4:32664690-32664709 | MS.gene53143:intron | 55.0% | |
| GCGTGCTGAACCAGATCTAC+TGG | - | chr5.4:32667155-32667174 | MS.gene53143:intron | 55.0% | |
| GCGTGTTTGGGTAAAGGGTG+GGG | + | chr5.4:32665585-32665604 | None:intergenic | 55.0% | |
| GTGCGTGTTTGGGTAAAGGG+TGG | + | chr5.4:32665587-32665606 | None:intergenic | 55.0% | |
| ! | TTGGGTACCCTTTTGCGTCG+AGG | - | chr5.4:32664643-32664662 | MS.gene53143:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 32664492 | 32667918 | 32664492 | ID=MS.gene53143 |
| chr5.4 | mRNA | 32664492 | 32667918 | 32664492 | ID=MS.gene53143.t1;Parent=MS.gene53143 |
| chr5.4 | exon | 32667601 | 32667918 | 32667601 | ID=MS.gene53143.t1.exon1;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32667601 | 32667918 | 32667601 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32667264 | 32667323 | 32667264 | ID=MS.gene53143.t1.exon2;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32667264 | 32667323 | 32667264 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32666496 | 32666590 | 32666496 | ID=MS.gene53143.t1.exon3;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32666496 | 32666590 | 32666496 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32666068 | 32666240 | 32666068 | ID=MS.gene53143.t1.exon4;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32666068 | 32666240 | 32666068 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32665812 | 32665924 | 32665812 | ID=MS.gene53143.t1.exon5;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32665812 | 32665924 | 32665812 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32665224 | 32665269 | 32665224 | ID=MS.gene53143.t1.exon6;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32665224 | 32665269 | 32665224 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32664728 | 32664768 | 32664728 | ID=MS.gene53143.t1.exon7;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32664728 | 32664768 | 32664728 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| chr5.4 | exon | 32664492 | 32664647 | 32664492 | ID=MS.gene53143.t1.exon8;Parent=MS.gene53143.t1 |
| chr5.4 | CDS | 32664492 | 32664647 | 32664492 | ID=cds.MS.gene53143.t1;Parent=MS.gene53143.t1 |
| Gene Sequence |
| Protein sequence |
