Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82769.t1 | XP_013450693.1 | 84.5 | 303 | 35 | 2 | 1 | 293 | 1 | 301 | 4.80E-140 | 507.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82769.t1 | A0A072UG11 | 84.5 | 303 | 35 | 2 | 1 | 293 | 1 | 301 | 3.4e-140 | 507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene82769 | -0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene049150 | MS.gene82769 | 0.815882 | 7.36E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene82769 | 0.820781 | 5.72E-53 | -1.69E-46 |
| MS.gene049195 | MS.gene82769 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene82769 | 0.805117 | 1.56E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene82769 | 0.815725 | 7.98E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene82769 | 0.82035 | 7.18E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene82769 | 0.841652 | 4.17E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene82769 | 0.873592 | 1.31E-67 | -1.69E-46 |
| MS.gene049426 | MS.gene82769 | 0.811614 | 6.41E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene82769 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene82769 | 0.818726 | 1.69E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene82769 | 0.824783 | 6.69E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene82769 | 0.862938 | 3.56E-64 | -1.69E-46 |
| MS.gene049910 | MS.gene82769 | 0.843412 | 1.42E-58 | -1.69E-46 |
| MS.gene049993 | MS.gene82769 | 0.831834 | 1.33E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene82769 | 0.826004 | 3.44E-54 | -1.69E-46 |
| MS.gene050099 | MS.gene82769 | 0.836707 | 7.99E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene82769 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene050231 | MS.gene82769 | 0.836256 | 1.04E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene82769 | 0.89916 | 2.61E-77 | -1.69E-46 |
| MS.gene050397 | MS.gene82769 | 0.876229 | 1.65E-68 | -1.69E-46 |
| MS.gene050406 | MS.gene82769 | 0.834082 | 3.68E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene82769 | -0.848324 | 6.59E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene82769 | 0.819562 | 1.09E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene82769 | 0.864498 | 1.16E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene82769 | 0.86635 | 3.04E-65 | -1.69E-46 |
| MS.gene050558 | MS.gene82769 | 0.853 | 3.19E-61 | -1.69E-46 |
| MS.gene050560 | MS.gene82769 | 0.811687 | 6.18E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene82769 | 0.836403 | 9.55E-57 | -1.69E-46 |
| MS.gene050650 | MS.gene82769 | 0.83101 | 2.13E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene82769 | 0.865204 | 7.00E-65 | -1.69E-46 |
| MS.gene050783 | MS.gene82769 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene82769 | 0.84483 | 5.93E-59 | -1.69E-46 |
| MS.gene050820 | MS.gene82769 | 0.824315 | 8.63E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene82769 | 0.857725 | 1.34E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene82769 | 0.813713 | 2.23E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene82769 | -0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene051240 | MS.gene82769 | 0.800104 | 1.69E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene82769 | 0.822817 | 1.93E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene82769 | 0.834549 | 2.81E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene82769 | 0.87329 | 1.65E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene82769 | 0.914746 | 1.33E-84 | -1.69E-46 |
| MS.gene051662 | MS.gene82769 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene82769 | 0.827073 | 1.91E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene82769 | 0.876648 | 1.18E-68 | -1.69E-46 |
| MS.gene051877 | MS.gene82769 | 0.829529 | 4.89E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene82769 | 0.845328 | 4.35E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene82769 | -0.889236 | 2.90E-73 | -1.69E-46 |
| MS.gene052077 | MS.gene82769 | 0.842446 | 2.57E-58 | -1.69E-46 |
| MS.gene052078 | MS.gene82769 | 0.850715 | 1.42E-60 | -1.69E-46 |
| MS.gene052128 | MS.gene82769 | -0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene82769 | 0.804718 | 1.89E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene82769 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene82769 | 0.819576 | 1.08E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene82769 | 0.845932 | 2.98E-59 | -1.69E-46 |
| MS.gene052207 | MS.gene82769 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene82769 | 0.898994 | 3.07E-77 | -1.69E-46 |
| MS.gene052310 | MS.gene82769 | 0.861478 | 9.97E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene82769 | 0.83677 | 7.70E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene82769 | 0.832341 | 9.99E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene82769 | 0.851905 | 6.54E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene82769 | 0.847185 | 1.36E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene82769 | 0.851974 | 6.26E-61 | -1.69E-46 |
| MS.gene052982 | MS.gene82769 | 0.821134 | 4.74E-53 | -1.69E-46 |
| MS.gene053107 | MS.gene82769 | 0.852657 | 4.00E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene82769 | 0.8201 | 8.20E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene82769 | 0.841245 | 5.34E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene82769 | 0.836854 | 7.33E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene82769 | 0.911666 | 4.70E-83 | -1.69E-46 |
| MS.gene053907 | MS.gene82769 | 0.828328 | 9.56E-55 | -1.69E-46 |
| MS.gene053928 | MS.gene82769 | 0.835212 | 1.91E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene82769 | 0.85361 | 2.13E-61 | -1.69E-46 |
| MS.gene054010 | MS.gene82769 | 0.828738 | 7.61E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene82769 | 0.834434 | 3.00E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene82769 | 0.832835 | 7.54E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene82769 | 0.825394 | 4.80E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene82769 | 0.832588 | 8.68E-56 | -1.69E-46 |
| MS.gene05413 | MS.gene82769 | 0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene82769 | 0.878139 | 3.58E-69 | -1.69E-46 |
| MS.gene054349 | MS.gene82769 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene82769 | 0.862996 | 3.41E-64 | -1.69E-46 |
| MS.gene054556 | MS.gene82769 | 0.809147 | 2.19E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene82769 | 0.860161 | 2.51E-63 | -1.69E-46 |
| MS.gene054719 | MS.gene82769 | 0.867265 | 1.55E-65 | -1.69E-46 |
| MS.gene054802 | MS.gene82769 | 0.807677 | 4.50E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene82769 | 0.800367 | 1.49E-48 | -1.69E-46 |
| MS.gene054804 | MS.gene82769 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene82769 | 0.836492 | 9.07E-57 | -1.69E-46 |
| MS.gene054920 | MS.gene82769 | 0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene82769 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene82769 | 0.840713 | 7.37E-58 | -1.69E-46 |
| MS.gene054983 | MS.gene82769 | 0.867555 | 1.26E-65 | -1.69E-46 |
| MS.gene055116 | MS.gene82769 | 0.869242 | 3.59E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene82769 | 0.879529 | 1.16E-69 | -1.69E-46 |
| MS.gene055303 | MS.gene82769 | 0.803449 | 3.47E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene82769 | 0.840682 | 7.51E-58 | -1.69E-46 |
| MS.gene055370 | MS.gene82769 | 0.807134 | 5.86E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene82769 | 0.862342 | 5.42E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene82769 | 0.875977 | 2.01E-68 | -1.69E-46 |
| MS.gene055428 | MS.gene82769 | 0.893181 | 7.98E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene82769 | 0.881839 | 1.72E-70 | -1.69E-46 |
| MS.gene055564 | MS.gene82769 | 0.846291 | 2.38E-59 | -1.69E-46 |
| MS.gene055601 | MS.gene82769 | -0.824805 | 6.62E-54 | -1.69E-46 |
| MS.gene055604 | MS.gene82769 | 0.853767 | 1.92E-61 | -1.69E-46 |
| MS.gene055712 | MS.gene82769 | 0.822513 | 2.28E-53 | -1.69E-46 |
| MS.gene055859 | MS.gene82769 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene82769 | 0.835714 | 1.43E-56 | -1.69E-46 |
| MS.gene055971 | MS.gene82769 | 0.836969 | 6.85E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene82769 | 0.841091 | 5.86E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene82769 | 0.883225 | 5.37E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene82769 | 0.819922 | 9.00E-53 | -1.69E-46 |
| MS.gene056451 | MS.gene82769 | 0.852847 | 3.53E-61 | -1.69E-46 |
| MS.gene056452 | MS.gene82769 | 0.812169 | 4.85E-51 | -1.69E-46 |
| MS.gene056497 | MS.gene82769 | 0.801142 | 1.04E-48 | -1.69E-46 |
| MS.gene056514 | MS.gene82769 | 0.806223 | 9.13E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene82769 | 0.864895 | 8.75E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene82769 | 0.820791 | 5.69E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene82769 | 0.871996 | 4.46E-67 | -1.69E-46 |
| MS.gene056796 | MS.gene82769 | 0.852894 | 3.42E-61 | -1.69E-46 |
| MS.gene056846 | MS.gene82769 | 0.842122 | 3.13E-58 | -1.69E-46 |
| MS.gene056899 | MS.gene82769 | -0.872137 | 4.01E-67 | -1.69E-46 |
| MS.gene056902 | MS.gene82769 | 0.817003 | 4.13E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene82769 | 0.832981 | 6.93E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene82769 | 0.812651 | 3.81E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene82769 | 0.890888 | 6.55E-74 | -1.69E-46 |
| MS.gene057121 | MS.gene82769 | 0.902961 | 5.67E-79 | -1.69E-46 |
| MS.gene057123 | MS.gene82769 | 0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene82769 | 0.816862 | 4.44E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene82769 | 0.819541 | 1.10E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene82769 | 0.855282 | 7.00E-62 | -1.69E-46 |
| MS.gene05733 | MS.gene82769 | 0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene82769 | 0.828783 | 7.42E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene82769 | 0.829788 | 4.23E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene82769 | 0.842011 | 3.35E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene82769 | 0.819895 | 9.13E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene82769 | 0.838528 | 2.73E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene82769 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene057476 | MS.gene82769 | 0.834325 | 3.20E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene82769 | 0.847527 | 1.09E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene82769 | 0.845348 | 4.30E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene82769 | 0.802684 | 4.99E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene82769 | 0.909879 | 3.49E-82 | -1.69E-46 |
| MS.gene05811 | MS.gene82769 | 0.906056 | 2.23E-80 | -1.69E-46 |
| MS.gene058142 | MS.gene82769 | 0.881721 | 1.90E-70 | -1.69E-46 |
| MS.gene058233 | MS.gene82769 | 0.892113 | 2.14E-74 | -1.69E-46 |
| MS.gene058276 | MS.gene82769 | 0.873628 | 1.27E-67 | -1.69E-46 |
| MS.gene058293 | MS.gene82769 | 0.837617 | 4.68E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene82769 | 0.805955 | 1.04E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene82769 | 0.801868 | 7.35E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene82769 | 0.832805 | 7.67E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene82769 | 0.802602 | 5.19E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene82769 | 0.87349 | 1.41E-67 | -1.69E-46 |
| MS.gene058700 | MS.gene82769 | 0.824429 | 8.11E-54 | -1.69E-46 |
| MS.gene058710 | MS.gene82769 | 0.831195 | 1.92E-55 | -1.69E-46 |
| MS.gene058739 | MS.gene82769 | 0.814808 | 1.28E-51 | -1.69E-46 |
| MS.gene058746 | MS.gene82769 | 0.815791 | 7.71E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene82769 | 0.800871 | 1.18E-48 | -1.69E-46 |
| MS.gene058845 | MS.gene82769 | 0.816088 | 6.62E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene82769 | 0.86059 | 1.86E-63 | -1.69E-46 |
| MS.gene059011 | MS.gene82769 | 0.824238 | 8.99E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene82769 | 0.915509 | 5.41E-85 | -1.69E-46 |
| MS.gene059082 | MS.gene82769 | 0.817478 | 3.23E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene82769 | 0.871771 | 5.30E-67 | -1.69E-46 |
| MS.gene059247 | MS.gene82769 | 0.830545 | 2.76E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene82769 | 0.809583 | 1.76E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene82769 | 0.825531 | 4.46E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene82769 | 0.887898 | 9.52E-73 | -1.69E-46 |
| MS.gene059462 | MS.gene82769 | 0.829356 | 5.39E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene82769 | 0.851303 | 9.69E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene82769 | 0.843675 | 1.21E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene82769 | 0.832628 | 8.48E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene82769 | 0.865087 | 7.62E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene82769 | 0.860674 | 1.75E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene82769 | 0.862223 | 5.90E-64 | -1.69E-46 |
| MS.gene05984 | MS.gene82769 | 0.891286 | 4.56E-74 | -1.69E-46 |
| MS.gene059894 | MS.gene82769 | 0.851707 | 7.45E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene82769 | 0.836603 | 8.49E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene82769 | 0.857381 | 1.70E-62 | -1.69E-46 |
| MS.gene060407 | MS.gene82769 | 0.840744 | 7.23E-58 | -1.69E-46 |
| MS.gene06090 | MS.gene82769 | 0.841832 | 3.74E-58 | -1.69E-46 |
| MS.gene060986 | MS.gene82769 | 0.827507 | 1.51E-54 | -1.69E-46 |
| MS.gene060994 | MS.gene82769 | 0.817682 | 2.91E-52 | -1.69E-46 |
| MS.gene061000 | MS.gene82769 | 0.812798 | 3.54E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene82769 | 0.885271 | 9.39E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene82769 | -0.806911 | 6.54E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene82769 | -0.831516 | 1.60E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene82769 | 0.861778 | 8.08E-64 | -1.69E-46 |
| MS.gene061159 | MS.gene82769 | 0.845305 | 4.41E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82769.t1 | MTR_6g004030 | 91.118 | 304 | 13 | 4 | 1 | 293 | 1 | 301 | 0.0 | 543 |
| MS.gene82769.t1 | MTR_6g004030 | 88.664 | 247 | 14 | 4 | 1 | 236 | 1 | 244 | 9.70e-152 | 424 |
| MS.gene82769.t1 | MTR_8g046180 | 43.750 | 192 | 108 | 0 | 102 | 293 | 127 | 318 | 3.62e-57 | 186 |
| MS.gene82769.t1 | MTR_8g046180 | 44.444 | 162 | 90 | 0 | 100 | 261 | 125 | 286 | 1.53e-46 | 158 |
| MS.gene82769.t1 | MTR_8g046180 | 42.708 | 96 | 55 | 0 | 100 | 195 | 125 | 220 | 5.68e-22 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82769.t1 | AT5G08400 | 70.423 | 284 | 82 | 2 | 12 | 293 | 17 | 300 | 4.35e-153 | 430 |
| MS.gene82769.t1 | AT5G08400 | 63.091 | 317 | 82 | 3 | 12 | 293 | 17 | 333 | 5.71e-146 | 413 |
| MS.gene82769.t1 | AT4G29400 | 42.784 | 194 | 111 | 0 | 100 | 293 | 109 | 302 | 2.32e-59 | 192 |
Find 68 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTGAGTTCCAGGATAAT+TGG | 0.245524 | 6.1:+83171 | MS.gene82769:CDS |
| ATCCACTTGATTCATATATC+TGG | 0.260074 | 6.1:+81725 | MS.gene82769:CDS |
| ATTATCCTTCAAGTTGGATT+TGG | 0.271702 | 6.1:-81086 | None:intergenic |
| GAAATTGATAAATCGATAAA+AGG | 0.289722 | 6.1:+81115 | MS.gene82769:CDS |
| GACTTTCGTCGCTCCAAAAC+TGG | 0.293871 | 6.1:+81554 | MS.gene82769:CDS |
| TATATCTGGTTTGAATTGTA+TGG | 0.296023 | 6.1:+81739 | MS.gene82769:CDS |
| GTGGTCGGTCCATGGGTGAT+TGG | 0.323410 | 6.1:+84601 | MS.gene82769:CDS |
| GATCGCGACGTTAATCTAAT+TGG | 0.338744 | 6.1:+81772 | MS.gene82769:CDS |
| CTACAATTCTTCAAACTTGC+AGG | 0.343980 | 6.1:+81925 | MS.gene82769:CDS |
| CTGCAAGTTTGAAGAATTGT+AGG | 0.357092 | 6.1:-81924 | None:intergenic |
| TCTCTGAATGGCAGATATCT+TGG | 0.380849 | 6.1:+84558 | MS.gene82769:intron |
| TGTTGAGTTCCAGGATAATT+GGG | 0.382704 | 6.1:+83172 | MS.gene82769:CDS |
| GGCAACAACAGATCCAGTTT+TGG | 0.385284 | 6.1:-81567 | None:intergenic |
| TATCAGTGATGTTGAGTTCC+AGG | 0.390177 | 6.1:+83163 | MS.gene82769:CDS |
| GCCTTCACAATTACCCTGCT+TGG | 0.401282 | 6.1:+81209 | MS.gene82769:CDS |
| CTCGTTCCTTCATGAGTTGA+GGG | 0.406081 | 6.1:-81415 | None:intergenic |
| TAAATCCAAATCCAACTTGA+AGG | 0.414755 | 6.1:+81081 | MS.gene82769:CDS |
| ACTCTGAGCTTAAATTAGTA+AGG | 0.421880 | 6.1:-84422 | None:intergenic |
| GGGATGACAAACCCTGAGTA+TGG | 0.437201 | 6.1:+84630 | MS.gene82769:CDS |
| TGGTCGGTCCATGGGTGATT+GGG | 0.440212 | 6.1:+84602 | MS.gene82769:CDS |
| CCTTCACAATTACCCTGCTT+GGG | 0.441292 | 6.1:+81210 | MS.gene82769:CDS |
| CCTCTCTATGACTCAGATAA+GGG | 0.452501 | 6.1:+83110 | MS.gene82769:CDS |
| AACAAAGAACGAGTAGTAGA+AGG | 0.455081 | 6.1:-81043 | None:intergenic |
| ATCATCATTATCCTTCAAGT+TGG | 0.460940 | 6.1:-81092 | None:intergenic |
| ACTCAACATCACTGATATCA+TGG | 0.462409 | 6.1:-83157 | None:intergenic |
| GGTATGTCATGGGTCGACTT+GGG | 0.471237 | 6.1:+81900 | MS.gene82769:CDS |
| TCCTCTCTATGACTCAGATA+AGG | 0.474063 | 6.1:+83109 | MS.gene82769:CDS |
| ATACTCTCTAAAGGTGACTT+TGG | 0.475046 | 6.1:-81591 | None:intergenic |
| TGGTATGTCATGGGTCGACT+TGG | 0.479500 | 6.1:+81899 | MS.gene82769:CDS |
| GATAAATCGATAAAAGGATC+AGG | 0.491583 | 6.1:+81121 | MS.gene82769:CDS |
| AATACTTACTTAGCCCAAGC+AGG | 0.499987 | 6.1:-81223 | None:intergenic |
| TCCATGGGTGATTGGGAAGA+GGG | 0.507364 | 6.1:+84609 | MS.gene82769:CDS |
| AGATTAACGTCGCGATCAGA+TGG | 0.511089 | 6.1:-81766 | None:intergenic |
| GTCCATGGGTGATTGGGAAG+AGG | 0.512718 | 6.1:+84608 | MS.gene82769:CDS |
| TGATAATACATACTCTCTAA+AGG | 0.512928 | 6.1:-81600 | None:intergenic |
| ACTGAACTACGTGCTGTACT+TGG | 0.518691 | 6.1:+81377 | MS.gene82769:CDS |
| AAGTACTTGTAACCATACTC+AGG | 0.526116 | 6.1:-84642 | None:intergenic |
| CTCTCTAAAGGTGACTTTGG+AGG | 0.530558 | 6.1:-81588 | None:intergenic |
| ACTCGTTCCTTCATGAGTTG+AGG | 0.531698 | 6.1:-81416 | None:intergenic |
| TATTCAAGCATGGTATGTCA+TGG | 0.547139 | 6.1:+81889 | MS.gene82769:CDS |
| GCAGATGTCAAATTCGTCAA+TGG | 0.550855 | 6.1:+83079 | MS.gene82769:intron |
| CCCCTCTTCCCAATCACCCA+TGG | 0.562425 | 6.1:-84610 | None:intergenic |
| GTATGTCATGGGTCGACTTG+GGG | 0.564827 | 6.1:+81901 | MS.gene82769:CDS |
| AACCAGATATATGAATCAAG+TGG | 0.567513 | 6.1:-81727 | None:intergenic |
| TTATACAGGTTATTCAAGCA+TGG | 0.570039 | 6.1:+81879 | MS.gene82769:intron |
| CCCAAGCAGGGTAATTGTGA+AGG | 0.584375 | 6.1:-81210 | None:intergenic |
| TCAGCACCGAGGATGACTGT+GGG | 0.584661 | 6.1:-81012 | None:intergenic |
| GGATCAGGAACCACTGCTAG+AGG | 0.592027 | 6.1:+81136 | MS.gene82769:CDS |
| GTTGAGTTCCAGGATAATTG+GGG | 0.594709 | 6.1:+83173 | MS.gene82769:CDS |
| ATTCAAGCATGGTATGTCAT+GGG | 0.596058 | 6.1:+81890 | MS.gene82769:CDS |
| TGGCAACCCTCAACTCATGA+AGG | 0.599388 | 6.1:+81409 | MS.gene82769:CDS |
| CTGATATCATGGAAAGATGA+CGG | 0.600764 | 6.1:-83146 | None:intergenic |
| TTCAGCACCGAGGATGACTG+TGG | 0.602295 | 6.1:-81013 | None:intergenic |
| AGTACTTGTAACCATACTCA+GGG | 0.602883 | 6.1:-84641 | None:intergenic |
| CCCTTATCTGAGTCATAGAG+AGG | 0.610008 | 6.1:-83110 | None:intergenic |
| GCTGTACTTGGTGATAGTAT+TGG | 0.617009 | 6.1:+81389 | MS.gene82769:CDS |
| CGTACTTGCAGGGTGGACCT+CGG | 0.621915 | 6.1:+84360 | MS.gene82769:intron |
| AGAAAGTGAGATGAGTAGCA+TGG | 0.631747 | 6.1:+80955 | None:intergenic |
| CCATGGGTGATTGGGAAGAG+GGG | 0.632965 | 6.1:+84610 | MS.gene82769:CDS |
| GTAGCATGGCGTGTGGATGT+TGG | 0.642842 | 6.1:+80969 | MS.gene82769:CDS |
| ATACTTACTTAGCCCAAGCA+GGG | 0.647476 | 6.1:-81222 | None:intergenic |
| TAATCTTCGACCTCTAGCAG+TGG | 0.651203 | 6.1:-81146 | None:intergenic |
| CAAAATAATCAGCAGTACCG+AGG | 0.656761 | 6.1:-84377 | None:intergenic |
| AGCACCGAGGATGACTGTGG+GGG | 0.681242 | 6.1:-81010 | None:intergenic |
| CAGCACCGAGGATGACTGTG+GGG | 0.685737 | 6.1:-81011 | None:intergenic |
| TTGAGTTCCAGGATAATTGG+GGG | 0.694550 | 6.1:+83174 | MS.gene82769:CDS |
| GAGATGAGTAGCATGGCGTG+TGG | 0.709846 | 6.1:+80962 | None:intergenic |
| AGGACTACGCTTCAGCACCG+AGG | 0.745029 | 6.1:-81023 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGATGTATATTTAAA+TGG | + | chr6.1:84005-84024 | MS.gene82769:intron | 10.0% |
| !! | AAAAAGATGTATATTTAAAT+GGG | + | chr6.1:84006-84025 | MS.gene82769:intron | 10.0% |
| !! | TTAATTAGAATTGAAAAATA+AGG | - | chr6.1:81475-81494 | None:intergenic | 10.0% |
| !!! | GTTTAATTAATTTTACTTTT+TGG | + | chr6.1:82942-82961 | MS.gene82769:intron | 10.0% |
| !! | ATGTCAATTAATTATTATAC+AGG | + | chr6.1:81865-81884 | MS.gene82769:intron | 15.0% |
| !! | TTTGAATTAAATACCAAAAT+TGG | - | chr6.1:82113-82132 | None:intergenic | 15.0% |
| !!! | AAAATTTCCTTACAAATTTT+AGG | + | chr6.1:82650-82669 | MS.gene82769:intron | 15.0% |
| !! | AAAGTCAATAAAAGCTATAA+AGG | - | chr6.1:83635-83654 | None:intergenic | 20.0% |
| !! | AAGAATTATAATATTCCAAG+AGG | - | chr6.1:82255-82274 | None:intergenic | 20.0% |
| !! | ACTCTAATTATTATTTGTCA+TGG | + | chr6.1:81679-81698 | MS.gene82769:intron | 20.0% |
| !! | ACTTCAATTCTTTGTTAAAA+GGG | - | chr6.1:83043-83062 | None:intergenic | 20.0% |
| !! | CTCTAATTATTATTTGTCAT+GGG | + | chr6.1:81680-81699 | MS.gene82769:intron | 20.0% |
| !! | GAAATTGATAAATCGATAAA+AGG | + | chr6.1:81115-81134 | MS.gene82769:CDS | 20.0% |
| !! | TACTTCAATTCTTTGTTAAA+AGG | - | chr6.1:83044-83063 | None:intergenic | 20.0% |
| !! | TATTAGTTGTTATACCTTAT+TGG | + | chr6.1:82488-82507 | MS.gene82769:intron | 20.0% |
| !! | TTTAAGAAAAACATGCAAAT+AGG | - | chr6.1:82582-82601 | None:intergenic | 20.0% |
| !!! | ATATGACCAATAATTTTTCT+GGG | - | chr6.1:83981-84000 | None:intergenic | 20.0% |
| !!! | ATTCTTGTTTATTGATAACT+AGG | + | chr6.1:82406-82425 | MS.gene82769:intron | 20.0% |
| !!! | CTTACTTGAACTAATTATTT+TGG | - | chr6.1:82358-82377 | None:intergenic | 20.0% |
| !!! | TAAACTAGTAAAAAGGTTTT+AGG | - | chr6.1:83407-83426 | None:intergenic | 20.0% |
| !!! | TAAAGAGAACTTTTACATTA+TGG | + | chr6.1:82598-82617 | MS.gene82769:intron | 20.0% |
| !!! | TAGATTTGATGATTTCATTA+AGG | - | chr6.1:82045-82064 | None:intergenic | 20.0% |
| !!! | TATTTTGTAAACATTCTGAT+AGG | - | chr6.1:82889-82908 | None:intergenic | 20.0% |
| !!! | TCATCAAATCTACTTTATTT+TGG | + | chr6.1:82053-82072 | MS.gene82769:intron | 20.0% |
| !!! | TGAAGTATCTTTTTAATTGA+TGG | + | chr6.1:83057-83076 | MS.gene82769:intron | 20.0% |
| ! | AAACCACAAGAGAAAAAATA+GGG | + | chr6.1:83824-83843 | MS.gene82769:intron | 25.0% |
| ! | ATAAAACTCATAAGCCAATT+GGG | - | chr6.1:82195-82214 | None:intergenic | 25.0% |
| ! | GAAGATAGAATTCGAAAAAA+GGG | + | chr6.1:81527-81546 | MS.gene82769:CDS | 25.0% |
| ! | TAACATAAAGACTACTAAAC+TGG | - | chr6.1:82279-82298 | None:intergenic | 25.0% |
| ! | TAAGCATGTAATGAATGAAT+GGG | - | chr6.1:81958-81977 | None:intergenic | 25.0% |
| ! | TAGTAGATAGTAGTTTCAAT+TGG | + | chr6.1:82297-82316 | MS.gene82769:intron | 25.0% |
| ! | TATAAAACTCATAAGCCAAT+TGG | - | chr6.1:82196-82215 | None:intergenic | 25.0% |
| ! | TATAGGCTAAACTAGTAAAA+AGG | - | chr6.1:83414-83433 | None:intergenic | 25.0% |
| ! | TCAATTATGAGTATACCATT+CGG | + | chr6.1:83655-83674 | MS.gene82769:intron | 25.0% |
| ! | TGATAATACATACTCTCTAA+AGG | - | chr6.1:81603-81622 | None:intergenic | 25.0% |
| !! | GATATGACCAATAATTTTTC+TGG | - | chr6.1:83982-84001 | None:intergenic | 25.0% |
| !! | TATATCTGGTTTGAATTGTA+TGG | + | chr6.1:81739-81758 | MS.gene82769:CDS | 25.0% |
| !! | TTGATGATTTCATTAAGGTA+AGG | - | chr6.1:82040-82059 | None:intergenic | 25.0% |
| !! | TTTTCAATCAAAACTCATGT+TGG | + | chr6.1:84310-84329 | MS.gene82769:intron | 25.0% |
| !!! | CTGTTAGTCTTTTTAATAAG+TGG | + | chr6.1:83222-83241 | MS.gene82769:intron | 25.0% |
| !!! | TAAATAGGTATTGAAAAGGA+GGG | + | chr6.1:84132-84151 | MS.gene82769:intron | 25.0% |
| !!! | TCGAACAAATTTTGATGATA+TGG | - | chr6.1:81653-81672 | None:intergenic | 25.0% |
| AAAGGAGAAACTAAATGATC+AGG | - | chr6.1:83617-83636 | None:intergenic | 30.0% | |
| AACCAGATATATGAATCAAG+TGG | - | chr6.1:81730-81749 | None:intergenic | 30.0% | |
| AAGCATGTAATGAATGAATG+GGG | - | chr6.1:81957-81976 | None:intergenic | 30.0% | |
| ACTAAATAGCAAATACCTCT+TGG | + | chr6.1:82237-82256 | MS.gene82769:intron | 30.0% | |
| ACTCTGAGCTTAAATTAGTA+AGG | - | chr6.1:84425-84444 | None:intergenic | 30.0% | |
| ATAGCTACACTTCAAAAAGA+GGG | - | chr6.1:82533-82552 | None:intergenic | 30.0% | |
| ATATAATCAACTTCACCTAG+TGG | + | chr6.1:84077-84096 | MS.gene82769:intron | 30.0% | |
| ATCATCATTATCCTTCAAGT+TGG | - | chr6.1:81095-81114 | None:intergenic | 30.0% | |
| ATCCACTTGATTCATATATC+TGG | + | chr6.1:81725-81744 | MS.gene82769:CDS | 30.0% | |
| ATGAGACCACAAAAAACTAT+AGG | - | chr6.1:83431-83450 | None:intergenic | 30.0% | |
| CTTCACTCCTAAAATTTGTA+AGG | - | chr6.1:82660-82679 | None:intergenic | 30.0% | |
| CTTGAAATTCCTCAAAATTC+TGG | + | chr6.1:82085-82104 | MS.gene82769:intron | 30.0% | |
| GAAACCACAAGAGAAAAAAT+AGG | + | chr6.1:83823-83842 | MS.gene82769:intron | 30.0% | |
| GAGAATAGTTCAATTGTTAG+AGG | + | chr6.1:83945-83964 | MS.gene82769:intron | 30.0% | |
| GATAAATCGATAAAAGGATC+AGG | + | chr6.1:81121-81140 | MS.gene82769:CDS | 30.0% | |
| GCTAAGAAGAGTAAATCAAA+TGG | - | chr6.1:83480-83499 | None:intergenic | 30.0% | |
| GGAAGATAGAATTCGAAAAA+AGG | + | chr6.1:81526-81545 | MS.gene82769:CDS | 30.0% | |
| GTAAGCATGTAATGAATGAA+TGG | - | chr6.1:81959-81978 | None:intergenic | 30.0% | |
| TAAATCCAAATCCAACTTGA+AGG | + | chr6.1:81081-81100 | MS.gene82769:CDS | 30.0% | |
| TATAGCTACACTTCAAAAAG+AGG | - | chr6.1:82534-82553 | None:intergenic | 30.0% | |
| TGCAGTAGAATATGAAAACA+CGG | + | chr6.1:84278-84297 | MS.gene82769:intron | 30.0% | |
| TTAAACAAATCGTACTTGCA+GGG | + | chr6.1:84350-84369 | MS.gene82769:intron | 30.0% | |
| TTATACAGGTTATTCAAGCA+TGG | + | chr6.1:81879-81898 | MS.gene82769:intron | 30.0% | |
| TTTAAACAAATCGTACTTGC+AGG | + | chr6.1:84349-84368 | MS.gene82769:intron | 30.0% | |
| TTTCATGCTTCATATAGACA+GGG | + | chr6.1:82445-82464 | MS.gene82769:intron | 30.0% | |
| ! | ATAAAATGCCTTTTCACTCT+AGG | + | chr6.1:83320-83339 | MS.gene82769:intron | 30.0% |
| ! | CAACTAGCTCGAAAATATTT+TGG | + | chr6.1:82795-82814 | MS.gene82769:intron | 30.0% |
| ! | CTTTTCAATACCTATTTAGC+TGG | - | chr6.1:84130-84149 | None:intergenic | 30.0% |
| ! | GGTATCCAACAAATTGTTTT+TGG | + | chr6.1:84579-84598 | MS.gene82769:CDS | 30.0% |
| ! | GTTACTTTGAAGAGAAAGTT+GGG | - | chr6.1:83590-83609 | None:intergenic | 30.0% |
| ! | TTACTTTGAAGAGAAAGTTG+GGG | - | chr6.1:83589-83608 | None:intergenic | 30.0% |
| ! | TTTAGCATCCTTTCTCTTTT+GGG | - | chr6.1:83855-83874 | None:intergenic | 30.0% |
| ! | TTTGACCATCTTTTCTGAAT+AGG | + | chr6.1:83557-83576 | MS.gene82769:intron | 30.0% |
| ! | TTTGAGGAATTTCAAGTCAA+CGG | - | chr6.1:82081-82100 | None:intergenic | 30.0% |
| !! | ATTATCCTTCAAGTTGGATT+TGG | - | chr6.1:81089-81108 | None:intergenic | 30.0% |
| !! | CAGCTAAATAGGTATTGAAA+AGG | + | chr6.1:84128-84147 | MS.gene82769:intron | 30.0% |
| !! | CTAAATAGGTATTGAAAAGG+AGG | + | chr6.1:84131-84150 | MS.gene82769:intron | 30.0% |
| !! | CTCATTTTTCCTCTAACTAA+TGG | + | chr6.1:83446-83465 | MS.gene82769:intron | 30.0% |
| !!! | AACAAATTGTTTTTGGTGGT+CGG | + | chr6.1:84586-84605 | MS.gene82769:CDS | 30.0% |
| !!! | AGTGAAAAGGCATTTTATTG+TGG | - | chr6.1:83318-83337 | None:intergenic | 30.0% |
| !!! | ATCCAACAAATTGTTTTTGG+TGG | + | chr6.1:84582-84601 | MS.gene82769:CDS | 30.0% |
| !!! | GTTTAGCCTATAGTTTTTTG+TGG | + | chr6.1:83422-83441 | MS.gene82769:intron | 30.0% |
| AAAAACAATAAATGCGCGCT+TGG | - | chr6.1:84512-84531 | None:intergenic | 35.0% | |
| AACAAAGAACGAGTAGTAGA+AGG | - | chr6.1:81046-81065 | None:intergenic | 35.0% | |
| AACTTGTATCAGAAGAGACA+TGG | - | chr6.1:82848-82867 | None:intergenic | 35.0% | |
| AAGTACTTGTAACCATACTC+AGG | - | chr6.1:84645-84664 | None:intergenic | 35.0% | |
| AAGTAGCAAATGAAAGTGAG+TGG | - | chr6.1:81997-82016 | None:intergenic | 35.0% | |
| AATAGCAAGAACAGCAACAA+TGG | + | chr6.1:82905-82924 | MS.gene82769:intron | 35.0% | |
| ACTCAACATCACTGATATCA+TGG | - | chr6.1:83160-83179 | None:intergenic | 35.0% | |
| AGAAACTAAATGATCAGGAG+TGG | - | chr6.1:83612-83631 | None:intergenic | 35.0% | |
| AGTACTTGTAACCATACTCA+GGG | - | chr6.1:84644-84663 | None:intergenic | 35.0% | |
| AGTAGCAAATGAAAGTGAGT+GGG | - | chr6.1:81996-82015 | None:intergenic | 35.0% | |
| ATGAAAAGCTCAGTCCAATA+AGG | - | chr6.1:82505-82524 | None:intergenic | 35.0% | |
| ATGATTGACCTTTCTCTGAA+TGG | + | chr6.1:84546-84565 | MS.gene82769:intron | 35.0% | |
| ATGTTGAGTTCCAGGATAAT+TGG | + | chr6.1:83171-83190 | MS.gene82769:CDS | 35.0% | |
| ATTCAAGCATGGTATGTCAT+GGG | + | chr6.1:81890-81909 | MS.gene82769:CDS | 35.0% | |
| ATTTAGACATGTGTGTACTG+AGG | - | chr6.1:83523-83542 | None:intergenic | 35.0% | |
| CAATTGAACTATTCTCCATC+TGG | - | chr6.1:83941-83960 | None:intergenic | 35.0% | |
| CACACATGTCTAAATTACCT+AGG | + | chr6.1:83528-83547 | MS.gene82769:intron | 35.0% | |
| CTACAATTCTTCAAACTTGC+AGG | + | chr6.1:81925-81944 | MS.gene82769:CDS | 35.0% | |
| CTGATATCATGGAAAGATGA+CGG | - | chr6.1:83149-83168 | None:intergenic | 35.0% | |
| CTGCAAGTTTGAAGAATTGT+AGG | - | chr6.1:81927-81946 | None:intergenic | 35.0% | |
| CTTTCATGCTTCATATAGAC+AGG | + | chr6.1:82444-82463 | MS.gene82769:intron | 35.0% | |
| GACCACCAAAAACAATTTGT+TGG | - | chr6.1:84587-84606 | None:intergenic | 35.0% | |
| GAGAAAAGTCCATTAGTTAG+AGG | - | chr6.1:83458-83477 | None:intergenic | 35.0% | |
| GGGATATCATTAGACTTGAT+TGG | + | chr6.1:84026-84045 | MS.gene82769:intron | 35.0% | |
| GTAGAATATGAAAACACGGT+AGG | + | chr6.1:84282-84301 | MS.gene82769:intron | 35.0% | |
| GTCTTGTATTGTTTAGAGAG+CGG | + | chr6.1:83880-83899 | MS.gene82769:intron | 35.0% | |
| TATTCAAGCATGGTATGTCA+TGG | + | chr6.1:81889-81908 | MS.gene82769:CDS | 35.0% | |
| TCACCTAGTGGAAAAAACAA+AGG | + | chr6.1:84089-84108 | MS.gene82769:intron | 35.0% | |
| TCTCTTCTGATACAAGTTCT+AGG | + | chr6.1:82850-82869 | MS.gene82769:intron | 35.0% | |
| TCTTGTATTGTTTAGAGAGC+GGG | + | chr6.1:83881-83900 | MS.gene82769:intron | 35.0% | |
| TGAGTATACCATTCGGAAAA+AGG | + | chr6.1:83662-83681 | MS.gene82769:intron | 35.0% | |
| TGATTGGCAACAAAACATTG+TGG | + | chr6.1:84042-84061 | MS.gene82769:intron | 35.0% | |
| TGTTGAGTTCCAGGATAATT+GGG | + | chr6.1:83172-83191 | MS.gene82769:CDS | 35.0% | |
| TTGATTTACTCTTCTTAGCG+AGG | + | chr6.1:83481-83500 | MS.gene82769:intron | 35.0% | |
| TTTGGATTGTCTGATTGCTT+CGG | + | chr6.1:82960-82979 | MS.gene82769:intron | 35.0% | |
| ! | AGTTCAATTGTTAGAGGTAC+AGG | + | chr6.1:83951-83970 | MS.gene82769:intron | 35.0% |
| ! | ATACTCTCTAAAGGTGACTT+TGG | - | chr6.1:81594-81613 | None:intergenic | 35.0% |
| ! | CAAAATTCTGGCACCAATTT+TGG | + | chr6.1:82097-82116 | MS.gene82769:intron | 35.0% |
| ! | CTTTAGCATCCTTTCTCTTT+TGG | - | chr6.1:83856-83875 | None:intergenic | 35.0% |
| ! | GCTACTTCTTCAGTTCTTTT+AGG | + | chr6.1:82010-82029 | MS.gene82769:intron | 35.0% |
| ! | GGTTACTTTGAAGAGAAAGT+TGG | - | chr6.1:83591-83610 | None:intergenic | 35.0% |
| ! | GTTCAATTGTTAGAGGTACA+GGG | + | chr6.1:83952-83971 | MS.gene82769:intron | 35.0% |
| !! | AGAGATGAGAGTATTACGAT+AGG | + | chr6.1:83753-83772 | MS.gene82769:intron | 35.0% |
| !!! | AAATTGGTGCCAGAATTTTG+AGG | - | chr6.1:82097-82116 | None:intergenic | 35.0% |
| !!! | AAGCCTTTGTTTTTTCCACT+AGG | - | chr6.1:84095-84114 | None:intergenic | 35.0% |
| !!! | CTACCCTATTTTTTCTCTTG+TGG | - | chr6.1:83830-83849 | None:intergenic | 35.0% |
| AATACTTACTTAGCCCAAGC+AGG | - | chr6.1:81226-81245 | None:intergenic | 40.0% | |
| AATTCTATCTTCCACCTGGA+AGG | - | chr6.1:81519-81538 | None:intergenic | 40.0% | |
| ACTCATAAGCCAATTGGGTT+CGG | - | chr6.1:82190-82209 | None:intergenic | 40.0% | |
| AGATGGTCAAAACTAGTCCT+AGG | - | chr6.1:83548-83567 | None:intergenic | 40.0% | |
| AGCCTCCTATTCAGAAAAGA+TGG | - | chr6.1:83565-83584 | None:intergenic | 40.0% | |
| ATACTTACTTAGCCCAAGCA+GGG | - | chr6.1:81225-81244 | None:intergenic | 40.0% | |
| ATCTGGTCTATCCTTCATAC+CGG | - | chr6.1:83924-83943 | None:intergenic | 40.0% | |
| ATGGTTGTCACCAGCTAAAT+AGG | + | chr6.1:84117-84136 | MS.gene82769:intron | 40.0% | |
| ATTATCGTGGCATTGTCTCT+TGG | + | chr6.1:83686-83705 | MS.gene82769:intron | 40.0% | |
| CAAAATAATCAGCAGTACCG+AGG | - | chr6.1:84380-84399 | None:intergenic | 40.0% | |
| CCTCTCTATGACTCAGATAA+GGG | + | chr6.1:83110-83129 | MS.gene82769:CDS | 40.0% | |
| CTTGTATTGTTTAGAGAGCG+GGG | + | chr6.1:83882-83901 | MS.gene82769:intron | 40.0% | |
| GATATCTGCCATTCAGAGAA+AGG | - | chr6.1:84557-84576 | None:intergenic | 40.0% | |
| GATCGCGACGTTAATCTAAT+TGG | + | chr6.1:81772-81791 | MS.gene82769:CDS | 40.0% | |
| GCAGATGTCAAATTCGTCAA+TGG | + | chr6.1:83079-83098 | MS.gene82769:intron | 40.0% | |
| GGAAAAAACAAAGGCTTCGA+TGG | + | chr6.1:84098-84117 | MS.gene82769:intron | 40.0% | |
| GGAGTGAAGTTTATGTGTTG+AGG | + | chr6.1:82671-82690 | MS.gene82769:intron | 40.0% | |
| GGGAGACCCAGAAAAATTAT+TGG | + | chr6.1:83972-83991 | MS.gene82769:intron | 40.0% | |
| GTTGAGTTCCAGGATAATTG+GGG | + | chr6.1:83173-83192 | MS.gene82769:CDS | 40.0% | |
| TATCAGTGATGTTGAGTTCC+AGG | + | chr6.1:83163-83182 | MS.gene82769:CDS | 40.0% | |
| TCCTCTCTATGACTCAGATA+AGG | + | chr6.1:83109-83128 | MS.gene82769:CDS | 40.0% | |
| TCTCTACTACAATGCTTGCT+TGG | - | chr6.1:82152-82171 | None:intergenic | 40.0% | |
| TCTCTGAATGGCAGATATCT+TGG | + | chr6.1:84558-84577 | MS.gene82769:intron | 40.0% | |
| TGTCCAAGTTGTACTAGGTA+CGG | + | chr6.1:82321-82340 | MS.gene82769:intron | 40.0% | |
| TTCGAATTCTATCTTCCACC+TGG | - | chr6.1:81523-81542 | None:intergenic | 40.0% | |
| TTGAGTTCCAGGATAATTGG+GGG | + | chr6.1:83174-83193 | MS.gene82769:CDS | 40.0% | |
| TTGGTTGTCCAAGTTGTACT+AGG | + | chr6.1:82316-82335 | MS.gene82769:intron | 40.0% | |
| TTGTTGAAACACCGGTATGA+AGG | + | chr6.1:83910-83929 | MS.gene82769:intron | 40.0% | |
| ! | AAATGCCTTTTCACTCTAGG+AGG | + | chr6.1:83323-83342 | MS.gene82769:intron | 40.0% |
| ! | CGATAATGCCTTTTTCCGAA+TGG | - | chr6.1:83673-83692 | None:intergenic | 40.0% |
| ! | CGTTTTTGCAAGCATCTTCA+AGG | - | chr6.1:81355-81374 | None:intergenic | 40.0% |
| ! | GACCATCTTTTCTGAATAGG+AGG | + | chr6.1:83560-83579 | MS.gene82769:intron | 40.0% |
| ! | GCTGTACTTGGTGATAGTAT+TGG | + | chr6.1:81389-81408 | MS.gene82769:CDS | 40.0% |
| ! | TGAGGTGACTTTTTGTGTGA+TGG | + | chr6.1:82689-82708 | MS.gene82769:intron | 40.0% |
| !! | GGGAAAACTTGTTGAAACAC+CGG | + | chr6.1:83902-83921 | MS.gene82769:intron | 40.0% |
| !! | TTCGGAAAAAGGCATTATCG+TGG | + | chr6.1:83673-83692 | MS.gene82769:intron | 40.0% |
| !!! | GTGGTTTTATGACCTTGCAA+TGG | + | chr6.1:83241-83260 | MS.gene82769:intron | 40.0% |
| AACAAATCGTACTTGCAGGG+TGG | + | chr6.1:84353-84372 | MS.gene82769:intron | 45.0% | |
| ACTCGTTCCTTCATGAGTTG+AGG | - | chr6.1:81419-81438 | None:intergenic | 45.0% | |
| ACTGAACTACGTGCTGTACT+TGG | + | chr6.1:81377-81396 | MS.gene82769:CDS | 45.0% | |
| AGATTAACGTCGCGATCAGA+TGG | - | chr6.1:81769-81788 | None:intergenic | 45.0% | |
| AGCAAATGAAAGTGAGTGGG+AGG | - | chr6.1:81993-82012 | None:intergenic | 45.0% | |
| CAGTTCCTCCTAGAGTGAAA+AGG | - | chr6.1:83331-83350 | None:intergenic | 45.0% | |
| CCCTTATCTGAGTCATAGAG+AGG | - | chr6.1:83113-83132 | None:intergenic | 45.0% | |
| CCTTCACAATTACCCTGCTT+GGG | + | chr6.1:81210-81229 | MS.gene82769:CDS | 45.0% | |
| CTCATAAGCCAATTGGGTTC+GGG | - | chr6.1:82189-82208 | None:intergenic | 45.0% | |
| GAACCGTACCTAGTACAACT+TGG | - | chr6.1:82327-82346 | None:intergenic | 45.0% | |
| GGATTGAAGCTGCTAGCAAA+AGG | - | chr6.1:81709-81728 | None:intergenic | 45.0% | |
| GGTATGAAGGATAGACCAGA+TGG | + | chr6.1:83923-83942 | MS.gene82769:intron | 45.0% | |
| GTCTCTTGGATATGTTTCGC+AGG | + | chr6.1:83700-83719 | MS.gene82769:intron | 45.0% | |
| GTGTTCCTTTCTTTCCTTCC+AGG | + | chr6.1:81502-81521 | MS.gene82769:intron | 45.0% | |
| TAATCTTCGACCTCTAGCAG+TGG | - | chr6.1:81149-81168 | None:intergenic | 45.0% | |
| TATGACCTTGCAATGGACAG+AGG | + | chr6.1:83248-83267 | MS.gene82769:intron | 45.0% | |
| TCTAGGAGGAACTGACAACA+TGG | + | chr6.1:83337-83356 | MS.gene82769:intron | 45.0% | |
| TGTAAGCATGTGCTGTCAGA+TGG | - | chr6.1:82760-82779 | None:intergenic | 45.0% | |
| TTCAACCTCTGTCCATTGCA+AGG | - | chr6.1:83256-83275 | None:intergenic | 45.0% | |
| TTCCACCTGGAAGGAAAGAA+AGG | - | chr6.1:81510-81529 | None:intergenic | 45.0% | |
| TTCCTTTCTTTCCTTCCAGG+TGG | + | chr6.1:81505-81524 | MS.gene82769:intron | 45.0% | |
| ! | CTCGTTCCTTCATGAGTTGA+GGG | - | chr6.1:81418-81437 | None:intergenic | 45.0% |
| ! | CTCTCTAAAGGTGACTTTGG+AGG | - | chr6.1:81591-81610 | None:intergenic | 45.0% |
| ! | GGCAACAACAGATCCAGTTT+TGG | - | chr6.1:81570-81589 | None:intergenic | 45.0% |
| !! | ATTTGAATTATATATATATA+TGG | + | chr6.1:81297-81316 | MS.gene82769:intron | 5.0% |
| !! | TATTTAATTCAAATTTATAA+TGG | + | chr6.1:82120-82139 | MS.gene82769:intron | 5.0% |
| AAAAGGGAGCAGCTACACAC+AGG | - | chr6.1:83027-83046 | None:intergenic | 50.0% | |
| AAACACGCCCCCAATTATCC+TGG | - | chr6.1:83184-83203 | None:intergenic | 50.0% | |
| CATCTCTGCAACACTGAGCT+TGG | - | chr6.1:83740-83759 | None:intergenic | 50.0% | |
| CCCAAGCAGGGTAATTGTGA+AGG | - | chr6.1:81213-81232 | None:intergenic | 50.0% | |
| GACTTTCGTCGCTCCAAAAC+TGG | + | chr6.1:81554-81573 | MS.gene82769:CDS | 50.0% | |
| GCCTTCACAATTACCCTGCT+TGG | + | chr6.1:81209-81228 | MS.gene82769:CDS | 50.0% | |
| GGGATGACAAACCCTGAGTA+TGG | + | chr6.1:84630-84649 | MS.gene82769:CDS | 50.0% | |
| GGGTAGCTCCCAAAAGAGAA+AGG | + | chr6.1:83844-83863 | MS.gene82769:intron | 50.0% | |
| TCCATGGGTGATTGGGAAGA+GGG | + | chr6.1:84609-84628 | MS.gene82769:CDS | 50.0% | |
| TGGCAACCCTCAACTCATGA+AGG | + | chr6.1:81409-81428 | MS.gene82769:CDS | 50.0% | |
| TGGTATGTCATGGGTCGACT+TGG | + | chr6.1:81899-81918 | MS.gene82769:CDS | 50.0% | |
| ! | AGGATAATTGGGGGCGTGTT+TGG | + | chr6.1:83183-83202 | MS.gene82769:CDS | 50.0% |
| ! | GGTATGTCATGGGTCGACTT+GGG | + | chr6.1:81900-81919 | MS.gene82769:CDS | 50.0% |
| !! | GTATGTCATGGGTCGACTTG+GGG | + | chr6.1:81901-81920 | MS.gene82769:CDS | 50.0% |
| !!! | GTTTTTGGTGGTCGGTCCAT+GGG | + | chr6.1:84594-84613 | MS.gene82769:CDS | 50.0% |
| !!! | TGTTTTTGGTGGTCGGTCCA+TGG | + | chr6.1:84593-84612 | MS.gene82769:CDS | 50.0% |
| CCATGGGTGATTGGGAAGAG+GGG | + | chr6.1:84610-84629 | MS.gene82769:CDS | 55.0% | |
| GGATCAGGAACCACTGCTAG+AGG | + | chr6.1:81136-81155 | MS.gene82769:CDS | 55.0% | |
| GTAGCATGGCGTGTGGATGT+TGG | + | chr6.1:80969-80988 | MS.gene82769:CDS | 55.0% | |
| GTCCATGGGTGATTGGGAAG+AGG | + | chr6.1:84608-84627 | MS.gene82769:CDS | 55.0% | |
| TGGTCGGTCCATGGGTGATT+GGG | + | chr6.1:84602-84621 | MS.gene82769:CDS | 55.0% | |
| TTGAGACGCCCGAACCCAAT+TGG | + | chr6.1:82178-82197 | MS.gene82769:intron | 55.0% | |
| ! | TCAGCACCGAGGATGACTGT+GGG | - | chr6.1:81015-81034 | None:intergenic | 55.0% |
| ! | TTCAGCACCGAGGATGACTG+TGG | - | chr6.1:81016-81035 | None:intergenic | 55.0% |
| AGGACTACGCTTCAGCACCG+AGG | - | chr6.1:81026-81045 | None:intergenic | 60.0% | |
| CCCCTCTTCCCAATCACCCA+TGG | - | chr6.1:84613-84632 | None:intergenic | 60.0% | |
| CGTACTTGCAGGGTGGACCT+CGG | + | chr6.1:84360-84379 | MS.gene82769:intron | 60.0% | |
| CTGTCCCCCACAGTCATCCT+CGG | + | chr6.1:81006-81025 | MS.gene82769:CDS | 60.0% | |
| GGGAGCAGCTACACACAGGT+TGG | - | chr6.1:83023-83042 | None:intergenic | 60.0% | |
| GTGGTCGGTCCATGGGTGAT+TGG | + | chr6.1:84601-84620 | MS.gene82769:CDS | 60.0% | |
| ! | AGCACCGAGGATGACTGTGG+GGG | - | chr6.1:81013-81032 | None:intergenic | 60.0% |
| ! | CAGCACCGAGGATGACTGTG+GGG | - | chr6.1:81014-81033 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 80965 | 84674 | 80965 | ID=MS.gene82769 |
| chr6.1 | mRNA | 80965 | 84674 | 80965 | ID=MS.gene82769.t1;Parent=MS.gene82769 |
| chr6.1 | exon | 80965 | 81236 | 80965 | ID=MS.gene82769.t1.exon1;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 80965 | 81236 | 80965 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 81349 | 81436 | 81349 | ID=MS.gene82769.t1.exon2;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 81349 | 81436 | 81349 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 81524 | 81609 | 81524 | ID=MS.gene82769.t1.exon3;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 81524 | 81609 | 81524 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 81720 | 81798 | 81720 | ID=MS.gene82769.t1.exon4;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 81720 | 81798 | 81720 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 81887 | 81946 | 81887 | ID=MS.gene82769.t1.exon5;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 81887 | 81946 | 81887 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 83083 | 83204 | 83083 | ID=MS.gene82769.t1.exon6;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 83083 | 83204 | 83083 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 84371 | 84442 | 84371 | ID=MS.gene82769.t1.exon7;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 84371 | 84442 | 84371 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| chr6.1 | exon | 84572 | 84674 | 84572 | ID=MS.gene82769.t1.exon8;Parent=MS.gene82769.t1 |
| chr6.1 | CDS | 84572 | 84674 | 84572 | ID=cds.MS.gene82769.t1;Parent=MS.gene82769.t1 |
| Gene Sequence |
| Protein sequence |
