Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25207.t1 | KEH40572.1 | 95 | 686 | 18 | 2 | 28 | 700 | 1 | 683 | 0.00E+00 | 1276.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25207.t1 | Q15024 | 37.4 | 281 | 171 | 1 | 416 | 696 | 4 | 279 | 3.0e-48 | 194.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25207.t1 | A0A072VFI7 | 95.0 | 686 | 18 | 2 | 28 | 700 | 1 | 683 | 0.0e+00 | 1276.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene25207 | 0.831765 | 1.39E-55 | -1.69E-46 |
| MS.gene049254 | MS.gene25207 | 0.816679 | 4.88E-52 | -1.69E-46 |
| MS.gene049293 | MS.gene25207 | -0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene049473 | MS.gene25207 | 0.828767 | 7.49E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene25207 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene049824 | MS.gene25207 | 0.84853 | 5.78E-60 | -1.69E-46 |
| MS.gene049825 | MS.gene25207 | 0.852313 | 5.01E-61 | -1.69E-46 |
| MS.gene049873 | MS.gene25207 | 0.842781 | 2.10E-58 | -1.69E-46 |
| MS.gene050277 | MS.gene25207 | 0.803654 | 3.14E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene25207 | 0.855542 | 5.88E-62 | -1.69E-46 |
| MS.gene050427 | MS.gene25207 | 0.808796 | 2.60E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene25207 | 0.813747 | 2.19E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene25207 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene25207 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene05134 | MS.gene25207 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene25207 | 0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene051574 | MS.gene25207 | 0.816137 | 6.46E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene25207 | 0.819329 | 1.23E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene25207 | 0.82124 | 4.49E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene25207 | 0.836965 | 6.87E-57 | -1.69E-46 |
| MS.gene051975 | MS.gene25207 | 0.842448 | 2.57E-58 | -1.69E-46 |
| MS.gene052108 | MS.gene25207 | 0.803447 | 3.47E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene25207 | 0.804313 | 2.29E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene25207 | 0.833463 | 5.26E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene25207 | 0.846563 | 2.01E-59 | -1.69E-46 |
| MS.gene052926 | MS.gene25207 | 0.801501 | 8.74E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene25207 | 0.810421 | 1.16E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene25207 | 0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene25207 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene25207 | 0.819467 | 1.14E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene25207 | 0.85548 | 6.13E-62 | -1.69E-46 |
| MS.gene053122 | MS.gene25207 | 0.824317 | 8.62E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene25207 | 0.881152 | 3.04E-70 | -1.69E-46 |
| MS.gene053230 | MS.gene25207 | 0.826619 | 2.46E-54 | -1.69E-46 |
| MS.gene053294 | MS.gene25207 | 0.824232 | 9.02E-54 | -1.69E-46 |
| MS.gene053599 | MS.gene25207 | 0.802564 | 5.28E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene25207 | 0.831854 | 1.32E-55 | -1.69E-46 |
| MS.gene053931 | MS.gene25207 | 0.814692 | 1.35E-51 | -1.69E-46 |
| MS.gene053995 | MS.gene25207 | 0.816532 | 5.27E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene25207 | 0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene25207 | 0.835605 | 1.52E-56 | -1.69E-46 |
| MS.gene055166 | MS.gene25207 | 0.827371 | 1.62E-54 | -1.69E-46 |
| MS.gene05517 | MS.gene25207 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene25207 | 0.813137 | 2.98E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene25207 | 0.809381 | 1.95E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene25207 | 0.828654 | 7.97E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene25207 | 0.815518 | 8.87E-52 | -1.69E-46 |
| MS.gene055589 | MS.gene25207 | 0.811405 | 7.12E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene25207 | 0.843944 | 1.03E-58 | -1.69E-46 |
| MS.gene055808 | MS.gene25207 | 0.874175 | 8.29E-68 | -1.69E-46 |
| MS.gene055841 | MS.gene25207 | 0.819222 | 1.30E-52 | -1.69E-46 |
| MS.gene056091 | MS.gene25207 | 0.877979 | 4.07E-69 | -1.69E-46 |
| MS.gene056215 | MS.gene25207 | 0.832226 | 1.07E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene25207 | 0.814758 | 1.31E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene25207 | 0.862827 | 3.85E-64 | -1.69E-46 |
| MS.gene056498 | MS.gene25207 | 0.806897 | 6.58E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene25207 | 0.80414 | 2.49E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene25207 | 0.84771 | 9.74E-60 | -1.69E-46 |
| MS.gene056631 | MS.gene25207 | 0.829273 | 5.64E-55 | -1.69E-46 |
| MS.gene05689 | MS.gene25207 | 0.867383 | 1.43E-65 | -1.69E-46 |
| MS.gene056986 | MS.gene25207 | 0.840054 | 1.10E-57 | -1.69E-46 |
| MS.gene057060 | MS.gene25207 | 0.836753 | 7.78E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene25207 | 0.818219 | 2.20E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene25207 | 0.811271 | 7.61E-51 | -1.69E-46 |
| MS.gene057555 | MS.gene25207 | 0.839337 | 1.68E-57 | -1.69E-46 |
| MS.gene057693 | MS.gene25207 | 0.828341 | 9.49E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene25207 | 0.845785 | 3.27E-59 | -1.69E-46 |
| MS.gene05781 | MS.gene25207 | 0.806134 | 9.53E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene25207 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene25207 | 0.80185 | 7.41E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene25207 | 0.801273 | 9.73E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene25207 | 0.819393 | 1.19E-52 | -1.69E-46 |
| MS.gene058498 | MS.gene25207 | 0.824182 | 9.27E-54 | -1.69E-46 |
| MS.gene058548 | MS.gene25207 | 0.819851 | 9.35E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene25207 | 0.805489 | 1.30E-49 | -1.69E-46 |
| MS.gene05879 | MS.gene25207 | 0.80931 | 2.02E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene25207 | 0.813323 | 2.71E-51 | -1.69E-46 |
| MS.gene05950 | MS.gene25207 | 0.817421 | 3.33E-52 | -1.69E-46 |
| MS.gene05953 | MS.gene25207 | 0.873102 | 1.91E-67 | -1.69E-46 |
| MS.gene05954 | MS.gene25207 | 0.884986 | 1.20E-71 | -1.69E-46 |
| MS.gene059569 | MS.gene25207 | 0.828321 | 9.59E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene25207 | 0.805156 | 1.53E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene25207 | 0.807311 | 5.38E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene25207 | 0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene059830 | MS.gene25207 | 0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene25207 | -0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene25207 | 0.88054 | 5.05E-70 | -1.69E-46 |
| MS.gene06001 | MS.gene25207 | 0.821434 | 4.05E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene25207 | 0.854689 | 1.04E-61 | -1.69E-46 |
| MS.gene060429 | MS.gene25207 | 0.880694 | 4.45E-70 | -1.69E-46 |
| MS.gene060521 | MS.gene25207 | 0.824274 | 8.82E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene25207 | 0.810715 | 1.00E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene25207 | 0.824432 | 8.10E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene25207 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene25207 | 0.849689 | 2.75E-60 | -1.69E-46 |
| MS.gene060907 | MS.gene25207 | 0.803063 | 4.17E-49 | -1.69E-46 |
| MS.gene061266 | MS.gene25207 | 0.802766 | 4.80E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25207.t1 | MTR_1g031820 | 95.044 | 686 | 18 | 2 | 28 | 700 | 1 | 683 | 0.0 | 1315 |
| MS.gene25207.t1 | MTR_8g077430 | 89.161 | 286 | 31 | 0 | 415 | 700 | 1 | 286 | 0.0 | 520 |
| MS.gene25207.t1 | MTR_8g077430 | 88.479 | 217 | 25 | 0 | 484 | 700 | 1 | 217 | 9.95e-135 | 395 |
| MS.gene25207.t1 | MTR_3g118420 | 75.556 | 90 | 22 | 0 | 23 | 112 | 3 | 92 | 2.32e-40 | 143 |
| MS.gene25207.t1 | MTR_1g063090 | 32.090 | 268 | 162 | 8 | 418 | 679 | 11 | 264 | 2.38e-29 | 119 |
| MS.gene25207.t1 | MTR_2g019210 | 29.286 | 280 | 179 | 7 | 418 | 691 | 11 | 277 | 3.92e-28 | 117 |
| MS.gene25207.t1 | MTR_2g019210 | 29.286 | 280 | 179 | 7 | 418 | 691 | 11 | 277 | 2.28e-27 | 116 |
| MS.gene25207.t1 | MTR_1g007060 | 29.787 | 282 | 185 | 5 | 424 | 697 | 28 | 304 | 1.97e-20 | 93.2 |
| MS.gene25207.t1 | MTR_1g007060 | 29.960 | 247 | 161 | 4 | 425 | 664 | 29 | 270 | 9.06e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25207.t1 | AT3G07750 | 80.070 | 286 | 56 | 1 | 416 | 700 | 1 | 286 | 2.37e-167 | 481 |
| MS.gene25207.t1 | AT3G07750 | 80.070 | 286 | 56 | 1 | 416 | 700 | 1 | 286 | 2.37e-167 | 481 |
| MS.gene25207.t1 | AT5G25500 | 48.492 | 398 | 186 | 8 | 28 | 415 | 32 | 420 | 1.05e-122 | 372 |
| MS.gene25207.t1 | AT3G12990 | 31.461 | 267 | 166 | 5 | 415 | 676 | 8 | 262 | 1.59e-27 | 113 |
| MS.gene25207.t1 | AT3G12990 | 31.461 | 267 | 166 | 5 | 415 | 676 | 8 | 262 | 3.15e-27 | 113 |
| MS.gene25207.t1 | AT3G12990 | 31.461 | 267 | 166 | 5 | 415 | 676 | 8 | 262 | 3.15e-27 | 113 |
| MS.gene25207.t1 | AT3G60500 | 31.086 | 267 | 167 | 7 | 415 | 676 | 8 | 262 | 1.42e-24 | 106 |
| MS.gene25207.t1 | AT3G60500 | 30.712 | 267 | 168 | 7 | 415 | 676 | 8 | 262 | 1.56e-23 | 104 |
| MS.gene25207.t1 | AT3G60500 | 30.712 | 267 | 168 | 7 | 415 | 676 | 8 | 262 | 1.56e-23 | 104 |
| MS.gene25207.t1 | AT3G60500 | 30.712 | 267 | 168 | 7 | 415 | 676 | 8 | 262 | 1.56e-23 | 104 |
| MS.gene25207.t1 | AT3G12990 | 31.100 | 209 | 129 | 4 | 415 | 620 | 8 | 204 | 3.25e-19 | 87.4 |
| MS.gene25207.t1 | AT1G60080 | 29.348 | 276 | 170 | 6 | 424 | 683 | 26 | 292 | 2.12e-18 | 87.0 |
Find 143 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAACATCTTCCCATTTC+TGG | 0.105835 | 1.3:-17078582 | None:intergenic |
| ACCTATGGTATTCATAATTT+TGG | 0.116551 | 1.3:+17079693 | MS.gene25207:CDS |
| TGCAGTTGATTTGGATTATT+TGG | 0.124181 | 1.3:+17078408 | MS.gene25207:CDS |
| TGGGTCAACTTTATTATCTT+TGG | 0.175781 | 1.3:-17078013 | None:intergenic |
| CTCATTTGTGATTCCTCTTC+AGG | 0.233900 | 1.3:-17082592 | None:intergenic |
| TTTGGATTATTTGGCTTCTC+AGG | 0.311307 | 1.3:+17078417 | MS.gene25207:CDS |
| TTATTACAGTATTACCTCTA+TGG | 0.317225 | 1.3:+17078817 | MS.gene25207:CDS |
| GGACAAAATGAGACGTGTTT+TGG | 0.325210 | 1.3:+17078177 | MS.gene25207:CDS |
| TCTCTTGTCCGAGTGTTTAT+CGG | 0.325868 | 1.3:+17078139 | MS.gene25207:CDS |
| TCCAAGTGTCATTCTTGATA+TGG | 0.333896 | 1.3:+17082690 | MS.gene25207:CDS |
| GCAAACGTGGATACAATTAA+TGG | 0.339330 | 1.3:+17078043 | MS.gene25207:CDS |
| CAGTTTCTATCTCTATTAAC+AGG | 0.340045 | 1.3:+17082620 | MS.gene25207:CDS |
| ATTCTTCTGATTCCCAGAAA+TGG | 0.349988 | 1.3:+17078569 | MS.gene25207:CDS |
| TATCCACGTTTGCAAGCAAT+TGG | 0.353099 | 1.3:-17078033 | None:intergenic |
| CGACCAATCCATGTTGAAAC+TGG | 0.353287 | 1.3:+17079948 | MS.gene25207:CDS |
| TATCGGGTCTACGTTTGTTC+AGG | 0.358312 | 1.3:+17078156 | MS.gene25207:CDS |
| TAGTAATGGCTTGTAGAATT+CGG | 0.361938 | 1.3:+17077870 | None:intergenic |
| AGCTGGAATGAAAGGGCATT+TGG | 0.362554 | 1.3:+17079014 | MS.gene25207:CDS |
| CAACCCTGCACCTCCTCGTT+TGG | 0.362588 | 1.3:-17082665 | None:intergenic |
| TGCTCTTCAACGATGTCTCT+TGG | 0.365642 | 1.3:+17081279 | MS.gene25207:CDS |
| AGGTTACGCAGCATCATATA+TGG | 0.377900 | 1.3:+17078353 | MS.gene25207:CDS |
| TCGTCACTTACGTCAACTTC+TGG | 0.393816 | 1.3:-17082410 | None:intergenic |
| ATGAAGACTTTCCCTTTGTC+AGG | 0.394376 | 1.3:-17080320 | None:intergenic |
| AAAACACTGGGCCACTCATC+TGG | 0.396971 | 1.3:+17078781 | MS.gene25207:CDS |
| TTTCTGCAGTTTGACACATC+TGG | 0.404024 | 1.3:+17082437 | MS.gene25207:CDS |
| AGTAATGGCTTGTAGAATTC+GGG | 0.410188 | 1.3:+17077871 | None:intergenic |
| AAGAACATCTTCCCATTTCT+GGG | 0.411509 | 1.3:-17078581 | None:intergenic |
| CATTCAAGGTGGCATTGCTC+AGG | 0.431527 | 1.3:+17079890 | MS.gene25207:CDS |
| TTCTTCTGATTCCCAGAAAT+GGG | 0.435961 | 1.3:+17078570 | MS.gene25207:CDS |
| CGAGCAGTTAATGAATAAGT+TGG | 0.436047 | 1.3:+17082735 | MS.gene25207:CDS |
| TGTGATAATTACTCTGACTA+AGG | 0.439782 | 1.3:+17082466 | MS.gene25207:CDS |
| GGAGAACAACATTTCATTCA+AGG | 0.439872 | 1.3:+17079876 | MS.gene25207:CDS |
| GCTCTTCAACGATGTCTCTT+GGG | 0.440822 | 1.3:+17081280 | MS.gene25207:CDS |
| CTGCTCCAACACACCACAAA+TGG | 0.442942 | 1.3:-17079047 | None:intergenic |
| AACTTTGACGCTTGGAATAC+CGG | 0.445709 | 1.3:-17082360 | None:intergenic |
| TGTTGGGATCTTTATATTGA+CGG | 0.446236 | 1.3:+17081483 | MS.gene25207:CDS |
| AATCACTCTAGGTTCCCTTT+CGG | 0.446245 | 1.3:-17078251 | None:intergenic |
| ACACAAGTGCAGGCTGAACT+TGG | 0.446246 | 1.3:+17080278 | MS.gene25207:intron |
| ACACAGATCTACTTCAATAT+CGG | 0.452155 | 1.3:-17078848 | None:intergenic |
| CGATAACAGTATTGCTTACA+AGG | 0.452528 | 1.3:+17078717 | MS.gene25207:CDS |
| ATTTGATGACCTTAGGCAAA+TGG | 0.453467 | 1.3:+17080079 | MS.gene25207:intron |
| TTGTCAGGTTGCATTGAGCT+TGG | 0.453846 | 1.3:-17080305 | None:intergenic |
| CTCTTGTCCGAGTGTTTATC+GGG | 0.454494 | 1.3:+17078140 | MS.gene25207:CDS |
| GGTGTGTTGGAGCAGACAAT+AGG | 0.458874 | 1.3:+17079055 | MS.gene25207:CDS |
| AAGCAGTTGGATCGAGCACT+TGG | 0.459065 | 1.3:+17078967 | MS.gene25207:CDS |
| TGGACTTACGAGGCCATTTG+TGG | 0.462532 | 1.3:+17079034 | MS.gene25207:CDS |
| TGCTAAATATCTACAAATCC+TGG | 0.463188 | 1.3:+17078741 | MS.gene25207:CDS |
| CGCTCTAGGTGCTGCCATCA+AGG | 0.465933 | 1.3:+17081539 | MS.gene25207:CDS |
| TTGGATTATTTGGCTTCTCA+GGG | 0.472517 | 1.3:+17078418 | MS.gene25207:CDS |
| CTATCTCTATTAACAGGAAA+GGG | 0.476100 | 1.3:+17082626 | MS.gene25207:CDS |
| ATCATGTTGTGTATTTGTGT+TGG | 0.476728 | 1.3:-17078203 | None:intergenic |
| ATAACCAAACGAGGAGGTGC+AGG | 0.480137 | 1.3:+17082661 | MS.gene25207:CDS |
| GTATATTTATATAGGGAAGA+GGG | 0.482364 | 1.3:+17081227 | MS.gene25207:intron |
| ATGTTGTGTATTTGTGTTGG+AGG | 0.484915 | 1.3:-17078200 | None:intergenic |
| TCAGCAGTAACTTTGACGCT+TGG | 0.491144 | 1.3:-17082368 | None:intergenic |
| TTGAAAGCTTCTTCTGCACC+AGG | 0.497079 | 1.3:-17078759 | None:intergenic |
| TCAGATAGTGAGAGGATGGT+TGG | 0.498427 | 1.3:+17078934 | MS.gene25207:CDS |
| TAGGCTGCTTTGAGCAATAC+CGG | 0.499103 | 1.3:+17082341 | MS.gene25207:intron |
| ATGACCTTAGGCAAATGGTT+CGG | 0.499255 | 1.3:+17080084 | MS.gene25207:intron |
| CGAGGCCATTTGTGGTGTGT+TGG | 0.500443 | 1.3:+17079042 | MS.gene25207:CDS |
| TGTATATTTATATAGGGAAG+AGG | 0.500539 | 1.3:+17081226 | MS.gene25207:intron |
| ACTCCAGTTTCAACATGGAT+TGG | 0.501265 | 1.3:-17079951 | None:intergenic |
| TCAAACGAAGGTACTACATT+GGG | 0.502961 | 1.3:+17078442 | MS.gene25207:CDS |
| AAGTTTGTATGGGAAACAGC+TGG | 0.504294 | 1.3:+17078997 | MS.gene25207:CDS |
| AGTGATTGATTCACTGACTA+AGG | 0.506669 | 1.3:+17078267 | MS.gene25207:CDS |
| ATTAAAGTCGCATGTGGCTA+AGG | 0.506689 | 1.3:+17078648 | MS.gene25207:CDS |
| GTCGCATGTGGCTAAGGTTG+AGG | 0.512828 | 1.3:+17078654 | MS.gene25207:CDS |
| GACTTCAGATAGTGAGAGGA+TGG | 0.512900 | 1.3:+17078930 | MS.gene25207:CDS |
| GGAATGGTGGGTTTATCTCT+AGG | 0.515128 | 1.3:+17079855 | MS.gene25207:intron |
| GGACTTGTTGTCAGTTCAGA+TGG | 0.517057 | 1.3:+17081504 | MS.gene25207:CDS |
| TGGGAAACAGCTGGAATGAA+AGG | 0.517632 | 1.3:+17079006 | MS.gene25207:CDS |
| ATCCACGTTTGCAAGCAATT+GGG | 0.518012 | 1.3:-17078032 | None:intergenic |
| CAGATAGTGAGAGGATGGTT+GGG | 0.520974 | 1.3:+17078935 | MS.gene25207:CDS |
| GTGTGTTGGAGCAGACAATA+GGG | 0.521939 | 1.3:+17079056 | MS.gene25207:CDS |
| TCTATCTCTATTAACAGGAA+AGG | 0.524743 | 1.3:+17082625 | MS.gene25207:CDS |
| TGTTGCTACCAGGGACTGAC+AGG | 0.527873 | 1.3:+17079666 | MS.gene25207:intron |
| TTGGGTGCTAAAAGTGGAGC+AGG | 0.530873 | 1.3:+17081298 | MS.gene25207:CDS |
| TGTCTCTTGGGTGCTAAAAG+TGG | 0.537968 | 1.3:+17081292 | MS.gene25207:CDS |
| GCTCAATGCAACCTGACAAA+GGG | 0.537976 | 1.3:+17080309 | MS.gene25207:CDS |
| CTGACGCCGACTCATCATCA+TGG | 0.543822 | 1.3:+17078518 | MS.gene25207:CDS |
| TATTACAGTATTACCTCTAT+GGG | 0.544003 | 1.3:+17078818 | MS.gene25207:CDS |
| GGAAATTTGTTAGACGCTCT+AGG | 0.547273 | 1.3:+17081525 | MS.gene25207:CDS |
| GCTCAGGATCTTCGCTGTGA+TGG | 0.551212 | 1.3:+17079906 | MS.gene25207:CDS |
| CATTCTTGATATGGTATCTG+TGG | 0.557275 | 1.3:+17082699 | MS.gene25207:CDS |
| GAATATGCAACCTCAAAAGC+AGG | 0.557617 | 1.3:-17080371 | None:intergenic |
| CCTGTGGGCATACTTTGAAA+CGG | 0.559647 | 1.3:-17078333 | None:intergenic |
| GACCCAATTGCTTGCAAACG+TGG | 0.559854 | 1.3:+17078030 | MS.gene25207:CDS |
| TTAGTCAGAGTAATTATCAC+AGG | 0.560528 | 1.3:-17082464 | None:intergenic |
| TGAAACTGGAGTTATTCCTC+AGG | 0.561714 | 1.3:+17079962 | MS.gene25207:CDS |
| GCTTCTCAGGGCTCAAACGA+AGG | 0.563728 | 1.3:+17078430 | MS.gene25207:CDS |
| TTTACAACATGCAATGGTAT+CGG | 0.564515 | 1.3:+17077981 | MS.gene25207:CDS |
| CAAACGAGGAGGTGCAGGGT+TGG | 0.566265 | 1.3:+17082666 | MS.gene25207:CDS |
| TATATTTATATAGGGAAGAG+GGG | 0.568714 | 1.3:+17081228 | MS.gene25207:intron |
| TTTCAGTAAAACAACCGAAA+GGG | 0.575185 | 1.3:+17078237 | MS.gene25207:CDS |
| TGTGGATGCCACGCCTGAAG+AGG | 0.575584 | 1.3:+17082579 | MS.gene25207:CDS |
| GGACTGACAGGTGACACCTA+TGG | 0.577446 | 1.3:+17079678 | MS.gene25207:CDS |
| GTCAGTGAATCAATCACTCT+AGG | 0.577579 | 1.3:-17078262 | None:intergenic |
| TCTCTATTTGCTAGGTTGGG+AGG | 0.581168 | 1.3:+17082548 | MS.gene25207:intron |
| AGAGGTCATTGCCAGTGTGA+AGG | 0.582587 | 1.3:+17080129 | MS.gene25207:CDS |
| GGCTAAGGTTGAGGTCATGA+AGG | 0.583224 | 1.3:+17078663 | MS.gene25207:CDS |
| ACCAAAATTATGAATACCAT+AGG | 0.583328 | 1.3:-17079694 | None:intergenic |
| TGTTTCTGCTCAACAGAGGA+AGG | 0.585615 | 1.3:+17078306 | MS.gene25207:CDS |
| CCGTTTCAAAGTATGCCCAC+AGG | 0.587026 | 1.3:+17078333 | MS.gene25207:CDS |
| GGTTGGGAGGCACTATATTG+TGG | 0.587146 | 1.3:+17082561 | MS.gene25207:intron |
| CTTCATCCATGATGATGAGT+CGG | 0.589560 | 1.3:-17078524 | None:intergenic |
| CTCAAACGAAGGTACTACAT+TGG | 0.590470 | 1.3:+17078441 | MS.gene25207:CDS |
| TGGGCGTGGTGTGAAGCAGT+TGG | 0.590551 | 1.3:+17078954 | MS.gene25207:CDS |
| TTGTGATTCCTCTTCAGGCG+TGG | 0.591330 | 1.3:-17082587 | None:intergenic |
| ACGCAGCATCATATATGGAC+TGG | 0.593009 | 1.3:+17078358 | MS.gene25207:CDS |
| TATCGGTAACTCTCCCATAG+AGG | 0.594976 | 1.3:-17078831 | None:intergenic |
| TGTGCTGTTGTAGGAATGGT+GGG | 0.595846 | 1.3:+17079843 | MS.gene25207:intron |
| ACCATATCAAGAATGACACT+TGG | 0.596140 | 1.3:-17082691 | None:intergenic |
| GGGAAACAGCTGGAATGAAA+GGG | 0.597117 | 1.3:+17079007 | MS.gene25207:CDS |
| TTGAAGTAGATCTGTGTGGT+GGG | 0.597240 | 1.3:+17078854 | MS.gene25207:CDS |
| AGCTCAATGCAACCTGACAA+AGG | 0.602731 | 1.3:+17080308 | MS.gene25207:CDS |
| AAGATGTTTACAACATGCAA+TGG | 0.604841 | 1.3:+17077975 | MS.gene25207:CDS |
| TAAGGTTGAGGTCATGAAGG+AGG | 0.611559 | 1.3:+17078666 | MS.gene25207:CDS |
| GAATAACTCCAGTTTCAACA+TGG | 0.614523 | 1.3:-17079956 | None:intergenic |
| GTGTGCTGTTGTAGGAATGG+TGG | 0.616982 | 1.3:+17079842 | MS.gene25207:intron |
| AACAGGAAAGGGCACATCTG+TGG | 0.618289 | 1.3:+17082637 | MS.gene25207:CDS |
| TGAATAAGCAACCAGATGAG+TGG | 0.633002 | 1.3:-17078792 | None:intergenic |
| AGTGAGAGGATGGTTGGGCG+TGG | 0.634026 | 1.3:+17078940 | MS.gene25207:CDS |
| AAGGTTGAGGTCATGAAGGA+GGG | 0.634710 | 1.3:+17078667 | MS.gene25207:CDS |
| AGCAGTTGGATCGAGCACTT+GGG | 0.640857 | 1.3:+17078968 | MS.gene25207:CDS |
| TAACCAAACGAGGAGGTGCA+GGG | 0.641504 | 1.3:+17082662 | MS.gene25207:CDS |
| ACTTCTCTAGTTGTCGTCGA+AGG | 0.641982 | 1.3:+17081453 | MS.gene25207:CDS |
| CTTTCAGTAAAACAACCGAA+AGG | 0.649469 | 1.3:+17078236 | MS.gene25207:CDS |
| AACAAGATTAAAGTCGCATG+TGG | 0.652178 | 1.3:+17078642 | MS.gene25207:CDS |
| ATATTTATATAGGGAAGAGG+GGG | 0.653215 | 1.3:+17081229 | MS.gene25207:intron |
| TTGATGTTTCTGCTCAACAG+AGG | 0.657003 | 1.3:+17078302 | MS.gene25207:CDS |
| GAACAACATTTCATTCAAGG+TGG | 0.667860 | 1.3:+17079879 | MS.gene25207:CDS |
| ATTGAAGTAGATCTGTGTGG+TGG | 0.671996 | 1.3:+17078853 | MS.gene25207:CDS |
| TGTAAACATCTTGTGAAGAG+TGG | 0.677822 | 1.3:-17077964 | None:intergenic |
| ATCTGTGGTATAACCAAACG+AGG | 0.678878 | 1.3:+17082652 | MS.gene25207:CDS |
| ACGTAGACCCGATAAACACT+CGG | 0.683313 | 1.3:-17078147 | None:intergenic |
| AAAGGGCATTTGGACTTACG+AGG | 0.683908 | 1.3:+17079024 | MS.gene25207:CDS |
| TATGATGCTGCGTAACCTGT+GGG | 0.691436 | 1.3:-17078348 | None:intergenic |
| TTCTGCTCAACAGAGGAAGG+TGG | 0.698018 | 1.3:+17078309 | MS.gene25207:CDS |
| ATATGATGCTGCGTAACCTG+TGG | 0.701943 | 1.3:-17078349 | None:intergenic |
| TAGTCAGAGTAATTATCACA+GGG | 0.704592 | 1.3:-17082463 | None:intergenic |
| AGAAGTTGACGTAAGTGACG+AGG | 0.710797 | 1.3:+17082412 | MS.gene25207:CDS |
| TGTGGTATAACCAAACGAGG+AGG | 0.748915 | 1.3:+17082655 | MS.gene25207:CDS |
| GATATTGAAGTAGATCTGTG+TGG | 0.793807 | 1.3:+17078850 | MS.gene25207:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTTTGTATATTTATATA+GGG | + | chr1.3:17081220-17081239 | MS.gene25207:intron | 10.0% |
| !!! | ATTTTAAAAATTAAACAACT+AGG | - | chr1.3:17081889-17081908 | None:intergenic | 10.0% |
| !!! | TATCTTTTGTATATTTATAT+AGG | + | chr1.3:17081219-17081238 | MS.gene25207:intron | 10.0% |
| !!! | TATTTTATTTTTCTCTTTTT+TGG | + | chr1.3:17080948-17080967 | MS.gene25207:intron | 10.0% |
| !!! | TCAATATAATTAGTTTTATT+TGG | + | chr1.3:17081189-17081208 | MS.gene25207:intron | 10.0% |
| !! | AAAACTCCTATTTATAAAAA+AGG | - | chr1.3:17081794-17081813 | None:intergenic | 15.0% |
| !! | AATTCAAATAAGTTGTAAAT+AGG | - | chr1.3:17082026-17082045 | None:intergenic | 15.0% |
| !! | GAAATATCATATAAAAATTG+AGG | - | chr1.3:17079373-17079392 | None:intergenic | 15.0% |
| !! | TTAATAAGTTACTAATGTTA+TGG | - | chr1.3:17079510-17079529 | None:intergenic | 15.0% |
| !! | TTATATAAGTATCTTGAATA+GGG | + | chr1.3:17080456-17080475 | MS.gene25207:intron | 15.0% |
| !!! | GAGAATATAAAGATATTTTT+AGG | + | chr1.3:17081979-17081998 | MS.gene25207:intron | 15.0% |
| !!! | TATATGAATAAAAGTACAAA+GGG | - | chr1.3:17079810-17079829 | None:intergenic | 15.0% |
| !! | AAAATGTTTGTTCACTTAAA+AGG | - | chr1.3:17080929-17080948 | None:intergenic | 20.0% |
| !! | AAATGAGATAATGTGAAATT+GGG | + | chr1.3:17079307-17079326 | MS.gene25207:intron | 20.0% |
| !! | AAATGTTTGTTCACTTAAAA+GGG | - | chr1.3:17080928-17080947 | None:intergenic | 20.0% |
| !! | ATATAATGAACAAGACAAAT+TGG | - | chr1.3:17081705-17081724 | None:intergenic | 20.0% |
| !! | GTCTATAAAAGTAACAAATA+TGG | - | chr1.3:17081024-17081043 | None:intergenic | 20.0% |
| !! | GTTATATAAGTATCTTGAAT+AGG | + | chr1.3:17080455-17080474 | MS.gene25207:intron | 20.0% |
| !! | TATCATGTTTGTATTATCAA+TGG | - | chr1.3:17081733-17081752 | None:intergenic | 20.0% |
| !! | TCTTTATATTCTCAACATTA+TGG | - | chr1.3:17081972-17081991 | None:intergenic | 20.0% |
| !! | TGATAATACAAACATGATAT+TGG | + | chr1.3:17081734-17081753 | MS.gene25207:intron | 20.0% |
| !! | TGTACTATTAAACTAAAGTA+AGG | - | chr1.3:17080198-17080217 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAATAAGAACAT+TGG | - | chr1.3:17081371-17081390 | None:intergenic | 20.0% |
| !! | TTTCATAAACTAACTTGAAA+AGG | - | chr1.3:17082138-17082157 | None:intergenic | 20.0% |
| !!! | AATTATATTGAAGCACTAAA+AGG | - | chr1.3:17081180-17081199 | None:intergenic | 20.0% |
| !!! | ATTCTACTATAGCATTTTTT+GGG | + | chr1.3:17079630-17079649 | MS.gene25207:intron | 20.0% |
| !!! | CTATATGAATAAAAGTACAA+AGG | - | chr1.3:17079811-17079830 | None:intergenic | 20.0% |
| !!! | TCAGAAGAATTAACAATTTT+TGG | - | chr1.3:17078559-17078578 | None:intergenic | 20.0% |
| !!! | TTTTCATAAAAGTTGTAAGT+TGG | - | chr1.3:17082161-17082180 | None:intergenic | 20.0% |
| ! | AAAGAAATAAGAACATTGGA+AGG | - | chr1.3:17081367-17081386 | None:intergenic | 25.0% |
| ! | AAGAAATAAGAACATTGGAA+GGG | - | chr1.3:17081366-17081385 | None:intergenic | 25.0% |
| ! | AATAACAAGAACCATATGTT+AGG | - | chr1.3:17082317-17082336 | None:intergenic | 25.0% |
| ! | AATGAGATAATGTGAAATTG+GGG | + | chr1.3:17079308-17079327 | MS.gene25207:intron | 25.0% |
| ! | ACCAAAATTATGAATACCAT+AGG | - | chr1.3:17079697-17079716 | None:intergenic | 25.0% |
| ! | ACTCCTATTTATAAAAAAGG+AGG | - | chr1.3:17081791-17081810 | None:intergenic | 25.0% |
| ! | ATAAAAATGGAAATGATAGC+AGG | + | chr1.3:17078881-17078900 | MS.gene25207:CDS | 25.0% |
| ! | ATAACAAGAACCATATGTTA+GGG | - | chr1.3:17082316-17082335 | None:intergenic | 25.0% |
| ! | CAAATGAGATAATGTGAAAT+TGG | + | chr1.3:17079306-17079325 | MS.gene25207:intron | 25.0% |
| ! | CTCAATTTGATCATCAAAAA+TGG | - | chr1.3:17078098-17078117 | None:intergenic | 25.0% |
| ! | CTCCTATTTATAAAAAAGGA+GGG | - | chr1.3:17081790-17081809 | None:intergenic | 25.0% |
| ! | CTTGAAAAAGATGATGATAA+TGG | + | chr1.3:17081601-17081620 | MS.gene25207:intron | 25.0% |
| ! | GTATATTTATATAGGGAAGA+GGG | + | chr1.3:17081227-17081246 | MS.gene25207:intron | 25.0% |
| ! | TAAAAGTAACAAATATGGTG+TGG | - | chr1.3:17081019-17081038 | None:intergenic | 25.0% |
| ! | TATATTTATATAGGGAAGAG+GGG | + | chr1.3:17081228-17081247 | MS.gene25207:intron | 25.0% |
| ! | TATTACAGTATTACCTCTAT+GGG | + | chr1.3:17078818-17078837 | MS.gene25207:CDS | 25.0% |
| ! | TCCTATTTATAAAAAAGGAG+GGG | - | chr1.3:17081789-17081808 | None:intergenic | 25.0% |
| ! | TGAATAAAGAAAAATTCAGC+TGG | - | chr1.3:17080041-17080060 | None:intergenic | 25.0% |
| ! | TGTATATTTATATAGGGAAG+AGG | + | chr1.3:17081226-17081245 | MS.gene25207:intron | 25.0% |
| ! | TTATTACAGTATTACCTCTA+TGG | + | chr1.3:17078817-17078836 | MS.gene25207:CDS | 25.0% |
| ! | TTCTACTGATCATACTATAT+TGG | + | chr1.3:17080253-17080272 | MS.gene25207:intron | 25.0% |
| !! | ACCTATGGTATTCATAATTT+TGG | + | chr1.3:17079693-17079712 | MS.gene25207:CDS | 25.0% |
| !! | GAAATGCTATTCTCATTTTA+TGG | - | chr1.3:17081635-17081654 | None:intergenic | 25.0% |
| !! | GAATAATTTTGCAGTTGATT+TGG | + | chr1.3:17078399-17078418 | MS.gene25207:CDS | 25.0% |
| !!! | AATACCATCTTATTTTACAC+TGG | + | chr1.3:17079145-17079164 | MS.gene25207:intron | 25.0% |
| !!! | AATCTGATGCAAAAGTATTA+CGG | - | chr1.3:17081066-17081085 | None:intergenic | 25.0% |
| !!! | ATGGTTCTTGTTATTCTTTT+AGG | + | chr1.3:17082322-17082341 | MS.gene25207:intron | 25.0% |
| !!! | CATTCTACTATAGCATTTTT+TGG | + | chr1.3:17079629-17079648 | MS.gene25207:intron | 25.0% |
| !!! | GAAGAATTAACAATTTTTGG+AGG | - | chr1.3:17078556-17078575 | None:intergenic | 25.0% |
| !!! | TAAATAGGAGTTTTGTGAAA+TGG | + | chr1.3:17081800-17081819 | MS.gene25207:intron | 25.0% |
| !!! | TATTCATAATTTTGGTATGG+TGG | + | chr1.3:17079701-17079720 | MS.gene25207:intron | 25.0% |
| !!! | TGGTATTCATAATTTTGGTA+TGG | + | chr1.3:17079698-17079717 | MS.gene25207:intron | 25.0% |
| !!! | TTCTACTATAGCATTTTTTG+GGG | + | chr1.3:17079631-17079650 | MS.gene25207:intron | 25.0% |
| !!! | TTTTAGGATAAGATTGTGTT+TGG | + | chr1.3:17081995-17082014 | MS.gene25207:intron | 25.0% |
| AAGAAGCTTTCAAAAACACT+GGG | + | chr1.3:17078769-17078788 | MS.gene25207:CDS | 30.0% | |
| AAGATGTTTACAACATGCAA+TGG | + | chr1.3:17077975-17077994 | MS.gene25207:CDS | 30.0% | |
| AATAGGGTTCTTAGATATAG+AGG | + | chr1.3:17079072-17079091 | MS.gene25207:intron | 30.0% | |
| ACACAGATCTACTTCAATAT+CGG | - | chr1.3:17078851-17078870 | None:intergenic | 30.0% | |
| ATAAGTATCTTGAATAGGGA+TGG | + | chr1.3:17080460-17080479 | MS.gene25207:intron | 30.0% | |
| ATAGGGTTCTTAGATATAGA+GGG | + | chr1.3:17079073-17079092 | MS.gene25207:intron | 30.0% | |
| ATATTTATATAGGGAAGAGG+GGG | + | chr1.3:17081229-17081248 | MS.gene25207:intron | 30.0% | |
| ATCATGTTGTGTATTTGTGT+TGG | - | chr1.3:17078206-17078225 | None:intergenic | 30.0% | |
| ATGCATAATCTTCAGTATAG+TGG | + | chr1.3:17079605-17079624 | MS.gene25207:intron | 30.0% | |
| CAATCCAGTGTAAAATAAGA+TGG | - | chr1.3:17079152-17079171 | None:intergenic | 30.0% | |
| CAGTTTCTATCTCTATTAAC+AGG | + | chr1.3:17082620-17082639 | MS.gene25207:CDS | 30.0% | |
| CATGTTAAACTATCTTGGAT+TGG | + | chr1.3:17079757-17079776 | MS.gene25207:intron | 30.0% | |
| CCTATTTATAAAAAAGGAGG+GGG | - | chr1.3:17081788-17081807 | None:intergenic | 30.0% | |
| CTATCTCTATTAACAGGAAA+GGG | + | chr1.3:17082626-17082645 | MS.gene25207:CDS | 30.0% | |
| GTGAAGTCAATCAAATATTC+TGG | + | chr1.3:17080422-17080441 | MS.gene25207:intron | 30.0% | |
| TAGCTAAAGTGAAGAGTAAT+AGG | - | chr1.3:17080783-17080802 | None:intergenic | 30.0% | |
| TAGTCAGAGTAATTATCACA+GGG | - | chr1.3:17082466-17082485 | None:intergenic | 30.0% | |
| TCATACAATCTCTATTTGCT+AGG | + | chr1.3:17082540-17082559 | MS.gene25207:intron | 30.0% | |
| TCTATCTCTATTAACAGGAA+AGG | + | chr1.3:17082625-17082644 | MS.gene25207:CDS | 30.0% | |
| TGCATAATCTTCAGTATAGT+GGG | + | chr1.3:17079606-17079625 | MS.gene25207:intron | 30.0% | |
| TGCTAAATATCTACAAATCC+TGG | + | chr1.3:17078741-17078760 | MS.gene25207:CDS | 30.0% | |
| TGCTTCATGTTAAACTATCT+TGG | + | chr1.3:17079752-17079771 | MS.gene25207:intron | 30.0% | |
| TGGGTCAACTTTATTATCTT+TGG | - | chr1.3:17078016-17078035 | None:intergenic | 30.0% | |
| TGTGATAATTACTCTGACTA+AGG | + | chr1.3:17082466-17082485 | MS.gene25207:CDS | 30.0% | |
| TGTTGGGATCTTTATATTGA+CGG | + | chr1.3:17081483-17081502 | MS.gene25207:CDS | 30.0% | |
| TTAGTCAGAGTAATTATCAC+AGG | - | chr1.3:17082467-17082486 | None:intergenic | 30.0% | |
| TTCACAATGTCATGAAAGAA+TGG | - | chr1.3:17081670-17081689 | None:intergenic | 30.0% | |
| TTGAATTAGTTATCAGTCAG+TGG | + | chr1.3:17079169-17079188 | MS.gene25207:intron | 30.0% | |
| TTTACAACATGCAATGGTAT+CGG | + | chr1.3:17077981-17078000 | MS.gene25207:CDS | 30.0% | |
| TTTCAGTAAAACAACCGAAA+GGG | + | chr1.3:17078237-17078256 | MS.gene25207:CDS | 30.0% | |
| TTTCCAGTATTATCAAAACG+TGG | + | chr1.3:17080616-17080635 | MS.gene25207:intron | 30.0% | |
| ! | ATCATGAAAGTCGTCAATTT+TGG | + | chr1.3:17079529-17079548 | MS.gene25207:intron | 30.0% |
| ! | TGTGGTGGGATTTATAAAAA+TGG | + | chr1.3:17078868-17078887 | MS.gene25207:CDS | 30.0% |
| !! | AGATGATGATAATGGATTCT+TGG | + | chr1.3:17081609-17081628 | MS.gene25207:intron | 30.0% |
| !! | ATTTTAACAAACCTTCACAC+TGG | - | chr1.3:17080143-17080162 | None:intergenic | 30.0% |
| !! | GTGAAGGTTTGTTAAAATGT+TGG | + | chr1.3:17080145-17080164 | MS.gene25207:intron | 30.0% |
| !! | TGCAGTTGATTTGGATTATT+TGG | + | chr1.3:17078408-17078427 | MS.gene25207:CDS | 30.0% |
| !! | TTTCGGTTGTTTTACTGAAA+GGG | - | chr1.3:17078237-17078256 | None:intergenic | 30.0% |
| !!! | CATTTTAAGTTGTACCTTGA+TGG | - | chr1.3:17081556-17081575 | None:intergenic | 30.0% |
| AAAATCAGGGGAGAAACATT+TGG | - | chr1.3:17079251-17079270 | None:intergenic | 35.0% | |
| AAAGAAAAATTCAGCTGGCT+GGG | - | chr1.3:17080036-17080055 | None:intergenic | 35.0% | |
| AACAAGATTAAAGTCGCATG+TGG | + | chr1.3:17078642-17078661 | MS.gene25207:CDS | 35.0% | |
| AACCAATTGCAAGATCGTTT+GGG | - | chr1.3:17081914-17081933 | None:intergenic | 35.0% | |
| AAGAACATCTTCCCATTTCT+GGG | - | chr1.3:17078584-17078603 | None:intergenic | 35.0% | |
| AAGGGAACTTTGCCATAAAA+TGG | - | chr1.3:17080910-17080929 | None:intergenic | 35.0% | |
| AATTGAAAGGGAACAGAACA+AGG | - | chr1.3:17080990-17081009 | None:intergenic | 35.0% | |
| ACCATATCAAGAATGACACT+TGG | - | chr1.3:17082694-17082713 | None:intergenic | 35.0% | |
| AGAAGTTTGGCAGTAAATGA+AGG | - | chr1.3:17080847-17080866 | None:intergenic | 35.0% | |
| AGAGAATACGCAGATGAATA+AGG | - | chr1.3:17079398-17079417 | None:intergenic | 35.0% | |
| AGGAAACTAGGTAACAAATG+TGG | + | chr1.3:17079273-17079292 | MS.gene25207:intron | 35.0% | |
| ATACTTATGCCTAAAACCGA+TGG | + | chr1.3:17079468-17079487 | MS.gene25207:intron | 35.0% | |
| ATGTTGTGTATTTGTGTTGG+AGG | - | chr1.3:17078203-17078222 | None:intergenic | 35.0% | |
| ATTCTTCTGATTCCCAGAAA+TGG | + | chr1.3:17078569-17078588 | MS.gene25207:CDS | 35.0% | |
| CATTCTTGATATGGTATCTG+TGG | + | chr1.3:17082699-17082718 | MS.gene25207:CDS | 35.0% | |
| CATTTACTGCCAAACTTCTT+TGG | + | chr1.3:17080848-17080867 | MS.gene25207:intron | 35.0% | |
| CCAACCAAGAAAAAGTAAGT+GGG | - | chr1.3:17079731-17079750 | None:intergenic | 35.0% | |
| CGAGCAGTTAATGAATAAGT+TGG | + | chr1.3:17082735-17082754 | MS.gene25207:CDS | 35.0% | |
| CGATAACAGTATTGCTTACA+AGG | + | chr1.3:17078717-17078736 | MS.gene25207:CDS | 35.0% | |
| CGATCTTGCAATTGGTTAAA+TGG | + | chr1.3:17081917-17081936 | MS.gene25207:intron | 35.0% | |
| CTTTCAGTAAAACAACCGAA+AGG | + | chr1.3:17078236-17078255 | MS.gene25207:CDS | 35.0% | |
| GAACAACATTTCATTCAAGG+TGG | + | chr1.3:17079879-17079898 | MS.gene25207:CDS | 35.0% | |
| GAACTTTGCCATAAAATGGA+AGG | - | chr1.3:17080906-17080925 | None:intergenic | 35.0% | |
| GAAGAAGCTTTCAAAAACAC+TGG | + | chr1.3:17078768-17078787 | MS.gene25207:CDS | 35.0% | |
| GAATAACTCCAGTTTCAACA+TGG | - | chr1.3:17079959-17079978 | None:intergenic | 35.0% | |
| GATATTGAAGTAGATCTGTG+TGG | + | chr1.3:17078850-17078869 | MS.gene25207:CDS | 35.0% | |
| GCAAACGTGGATACAATTAA+TGG | + | chr1.3:17078043-17078062 | MS.gene25207:CDS | 35.0% | |
| GGAGAACAACATTTCATTCA+AGG | + | chr1.3:17079876-17079895 | MS.gene25207:CDS | 35.0% | |
| GTTCTGTTCCCTTTCAATTA+TGG | + | chr1.3:17080991-17081010 | MS.gene25207:intron | 35.0% | |
| TAAAGAAAAATTCAGCTGGC+TGG | - | chr1.3:17080037-17080056 | None:intergenic | 35.0% | |
| TAAAGTGAAGAGTAATAGGC+TGG | - | chr1.3:17080779-17080798 | None:intergenic | 35.0% | |
| TAACCAATTGCAAGATCGTT+TGG | - | chr1.3:17081915-17081934 | None:intergenic | 35.0% | |
| TACACAAACACAACCTTAAC+CGG | + | chr1.3:17082285-17082304 | MS.gene25207:intron | 35.0% | |
| TCATGAAAGAATGGTCACTT+CGG | - | chr1.3:17081661-17081680 | None:intergenic | 35.0% | |
| TCGTCGAAGGAAAAATTTGT+TGG | + | chr1.3:17081466-17081485 | MS.gene25207:CDS | 35.0% | |
| TCTTGCAATTGGTTAAATGG+AGG | + | chr1.3:17081920-17081939 | MS.gene25207:intron | 35.0% | |
| TGATCAGTAGAAAACTAACG+TGG | - | chr1.3:17080245-17080264 | None:intergenic | 35.0% | |
| TGTAAACATCTTGTGAAGAG+TGG | - | chr1.3:17077967-17077986 | None:intergenic | 35.0% | |
| TTAGAGAAGACCACAAGATT+CGG | - | chr1.3:17081837-17081856 | None:intergenic | 35.0% | |
| TTCTTCTGATTCCCAGAAAT+GGG | + | chr1.3:17078570-17078589 | MS.gene25207:CDS | 35.0% | |
| ! | ACAATCTCTATTTGCTAGGT+TGG | + | chr1.3:17082544-17082563 | MS.gene25207:intron | 35.0% |
| ! | AGTGATTGATTCACTGACTA+AGG | + | chr1.3:17078267-17078286 | MS.gene25207:CDS | 35.0% |
| ! | ATTTGATGACCTTAGGCAAA+TGG | + | chr1.3:17080079-17080098 | MS.gene25207:intron | 35.0% |
| ! | CAATCTCTATTTGCTAGGTT+GGG | + | chr1.3:17082545-17082564 | MS.gene25207:intron | 35.0% |
| ! | CGCTTTTACAGCATTTAATC+AGG | - | chr1.3:17078621-17078640 | None:intergenic | 35.0% |
| ! | CGTCGAAGGAAAAATTTGTT+GGG | + | chr1.3:17081467-17081486 | MS.gene25207:CDS | 35.0% |
| ! | TAAATGGAGGTTTTTGCTCA+TGG | + | chr1.3:17081933-17081952 | MS.gene25207:intron | 35.0% |
| ! | TCCAAGTGTCATTCTTGATA+TGG | + | chr1.3:17082690-17082709 | MS.gene25207:CDS | 35.0% |
| ! | TTCGTACATTTGATGACCTT+AGG | + | chr1.3:17080072-17080091 | MS.gene25207:intron | 35.0% |
| ! | TTGGATTATTTGGCTTCTCA+GGG | + | chr1.3:17078418-17078437 | MS.gene25207:CDS | 35.0% |
| ! | TTTGGATTATTTGGCTTCTC+AGG | + | chr1.3:17078417-17078436 | MS.gene25207:CDS | 35.0% |
| !! | ACCTAGTTTCCTCTAAAATC+AGG | - | chr1.3:17079265-17079284 | None:intergenic | 35.0% |
| !! | AGTAAAAATTGGTGCTACAG+AGG | + | chr1.3:17080111-17080130 | MS.gene25207:CDS | 35.0% |
| !! | CCTAGTTTCCTCTAAAATCA+GGG | - | chr1.3:17079264-17079283 | None:intergenic | 35.0% |
| !! | CTAGTTTCCTCTAAAATCAG+GGG | - | chr1.3:17079263-17079282 | None:intergenic | 35.0% |
| !! | CTTTCGGTTGTTTTACTGAA+AGG | - | chr1.3:17078238-17078257 | None:intergenic | 35.0% |
| !! | TCAAACGAAGGTACTACATT+GGG | + | chr1.3:17078442-17078461 | MS.gene25207:CDS | 35.0% |
| !! | TGCAAAAGTATTACGGTCTA+TGG | - | chr1.3:17081059-17081078 | None:intergenic | 35.0% |
| !! | TTCGGTTGTTTTACTGAAAG+GGG | - | chr1.3:17078236-17078255 | None:intergenic | 35.0% |
| !!! | ACATAATCACCATCGGTTTT+AGG | - | chr1.3:17079480-17079499 | None:intergenic | 35.0% |
| !!! | ATTGGGGAAAAGTATTTTGC+TGG | + | chr1.3:17079324-17079343 | MS.gene25207:intron | 35.0% |
| !!! | CCCCCTCCTTTTTTATAAAT+AGG | + | chr1.3:17081785-17081804 | MS.gene25207:intron | 35.0% |
| !!! | GGGAACATGTATTTTTTGCA+CGG | + | chr1.3:17079093-17079112 | MS.gene25207:intron | 35.0% |
| !!! | TGGGCTTTTCAAGTTTGTAT+GGG | + | chr1.3:17078987-17079006 | MS.gene25207:CDS | 35.0% |
| !!! | TTGGGCTTTTCAAGTTTGTA+TGG | + | chr1.3:17078986-17079005 | MS.gene25207:CDS | 35.0% |
| !!! | TTTTGACTTCAGATAGTGAG+AGG | + | chr1.3:17078926-17078945 | MS.gene25207:CDS | 35.0% |
| AAACACAACCTTAACCGGAA+AGG | + | chr1.3:17082290-17082309 | MS.gene25207:intron | 40.0% | |
| AACTTTGACGCTTGGAATAC+CGG | - | chr1.3:17082363-17082382 | None:intergenic | 40.0% | |
| AAGAAAAATTCAGCTGGCTG+GGG | - | chr1.3:17080035-17080054 | None:intergenic | 40.0% | |
| AAGCATTTGTGCAAGTGCTA+GGG | + | chr1.3:17082058-17082077 | MS.gene25207:intron | 40.0% | |
| AAGTTTGTATGGGAAACAGC+TGG | + | chr1.3:17078997-17079016 | MS.gene25207:CDS | 40.0% | |
| AATAGGGATGGAAATGAGTC+GGG | + | chr1.3:17080472-17080491 | MS.gene25207:intron | 40.0% | |
| AATCACTCTAGGTTCCCTTT+CGG | - | chr1.3:17078254-17078273 | None:intergenic | 40.0% | |
| ACTCCAGTTTCAACATGGAT+TGG | - | chr1.3:17079954-17079973 | None:intergenic | 40.0% | |
| AGGTTACGCAGCATCATATA+TGG | + | chr1.3:17078353-17078372 | MS.gene25207:CDS | 40.0% | |
| ATCCACGTTTGCAAGCAATT+GGG | - | chr1.3:17078035-17078054 | None:intergenic | 40.0% | |
| ATCCCAAACGATCTTGCAAT+TGG | + | chr1.3:17081909-17081928 | MS.gene25207:intron | 40.0% | |
| ATCTGTGGTATAACCAAACG+AGG | + | chr1.3:17082652-17082671 | MS.gene25207:CDS | 40.0% | |
| ATGAAGACTTTCCCTTTGTC+AGG | - | chr1.3:17080323-17080342 | None:intergenic | 40.0% | |
| ATGACCTTAGGCAAATGGTT+CGG | + | chr1.3:17080084-17080103 | MS.gene25207:intron | 40.0% | |
| ATTAAAGTCGCATGTGGCTA+AGG | + | chr1.3:17078648-17078667 | MS.gene25207:CDS | 40.0% | |
| ATTGAAGTAGATCTGTGTGG+TGG | + | chr1.3:17078853-17078872 | MS.gene25207:CDS | 40.0% | |
| CAAGAACATCTTCCCATTTC+TGG | - | chr1.3:17078585-17078604 | None:intergenic | 40.0% | |
| CCAAGAAAAAGTAAGTGGGA+TGG | - | chr1.3:17079727-17079746 | None:intergenic | 40.0% | |
| CTCATTTGTGATTCCTCTTC+AGG | - | chr1.3:17082595-17082614 | None:intergenic | 40.0% | |
| CTTTGCCATAAAATGGAAGG+CGG | - | chr1.3:17080903-17080922 | None:intergenic | 40.0% | |
| GAATAGGGATGGAAATGAGT+CGG | + | chr1.3:17080471-17080490 | MS.gene25207:intron | 40.0% | |
| GAATATGCAACCTCAAAAGC+AGG | - | chr1.3:17080374-17080393 | None:intergenic | 40.0% | |
| GCCAACCAAGAAAAAGTAAG+TGG | - | chr1.3:17079732-17079751 | None:intergenic | 40.0% | |
| GGTTCGGCAAGAGTAAAAAT+TGG | + | chr1.3:17080100-17080119 | MS.gene25207:CDS | 40.0% | |
| GTAAGCACGATCTTCACATT+AGG | - | chr1.3:17081335-17081354 | None:intergenic | 40.0% | |
| GTCAGTGAATCAATCACTCT+AGG | - | chr1.3:17078265-17078284 | None:intergenic | 40.0% | |
| TAGAGAAGACCACAAGATTC+GGG | - | chr1.3:17081836-17081855 | None:intergenic | 40.0% | |
| TATCCACGTTTGCAAGCAAT+TGG | - | chr1.3:17078036-17078055 | None:intergenic | 40.0% | |
| TCTCGACACATAATCACCAT+CGG | - | chr1.3:17079487-17079506 | None:intergenic | 40.0% | |
| TCTCTTGTCCGAGTGTTTAT+CGG | + | chr1.3:17078139-17078158 | MS.gene25207:CDS | 40.0% | |
| TGAAACTGGAGTTATTCCTC+AGG | + | chr1.3:17079962-17079981 | MS.gene25207:CDS | 40.0% | |
| TGAATAAGCAACCAGATGAG+TGG | - | chr1.3:17078795-17078814 | None:intergenic | 40.0% | |
| TGGTATTGCAATGCTATCAC+TGG | - | chr1.3:17079132-17079151 | None:intergenic | 40.0% | |
| TTGAAGTAGATCTGTGTGGT+GGG | + | chr1.3:17078854-17078873 | MS.gene25207:CDS | 40.0% | |
| TTGAAGTTACCCGAATCTTG+TGG | + | chr1.3:17081824-17081843 | MS.gene25207:intron | 40.0% | |
| TTTCTGCAGTTTGACACATC+TGG | + | chr1.3:17082437-17082456 | MS.gene25207:CDS | 40.0% | |
| ! | AAAGCATTTGTGCAAGTGCT+AGG | + | chr1.3:17082057-17082076 | MS.gene25207:intron | 40.0% |
| ! | AGCAGGTTTTGCTTGTCTAT+GGG | + | chr1.3:17078898-17078917 | MS.gene25207:CDS | 40.0% |
| ! | AGTCATCAAAGCATTACCTG+AGG | - | chr1.3:17079981-17080000 | None:intergenic | 40.0% |
| ! | CAGGTAATGCTTTGATGACT+TGG | + | chr1.3:17079981-17080000 | MS.gene25207:intron | 40.0% |
| ! | CTTCATCCATGATGATGAGT+CGG | - | chr1.3:17078527-17078546 | None:intergenic | 40.0% |
| ! | GAGAACACAGCTGTTATTTG+TGG | - | chr1.3:17081117-17081136 | None:intergenic | 40.0% |
| ! | GGACAAAATGAGACGTGTTT+TGG | + | chr1.3:17078177-17078196 | MS.gene25207:CDS | 40.0% |
| ! | GGAGGGACTTTTACACATAA+AGG | + | chr1.3:17078684-17078703 | MS.gene25207:CDS | 40.0% |
| ! | TACTGGAAGTCTAGAATCGA+AGG | - | chr1.3:17080755-17080774 | None:intergenic | 40.0% |
| ! | TAGCAGGTTTTGCTTGTCTA+TGG | + | chr1.3:17078897-17078916 | MS.gene25207:CDS | 40.0% |
| ! | TATATTGGCTACACAAGTGC+AGG | + | chr1.3:17080268-17080287 | MS.gene25207:intron | 40.0% |
| ! | TGTTTCTCCCCTGATTTTAG+AGG | + | chr1.3:17079253-17079272 | MS.gene25207:intron | 40.0% |
| ! | TTGATGTTTCTGCTCAACAG+AGG | + | chr1.3:17078302-17078321 | MS.gene25207:CDS | 40.0% |
| !! | AGTCAAGCTTTGAGTTGAAC+TGG | - | chr1.3:17080534-17080553 | None:intergenic | 40.0% |
| !! | CCCTGATTTTAGAGGAAACT+AGG | + | chr1.3:17079261-17079280 | MS.gene25207:intron | 40.0% |
| !! | CTCAAACGAAGGTACTACAT+TGG | + | chr1.3:17078441-17078460 | MS.gene25207:CDS | 40.0% |
| !! | GGAAATTTGTTAGACGCTCT+AGG | + | chr1.3:17081525-17081544 | MS.gene25207:CDS | 40.0% |
| !! | GTGTGGTGCCATAATTGAAA+GGG | - | chr1.3:17081002-17081021 | None:intergenic | 40.0% |
| !! | TCCTGAATTTGAGTTGCCAT+TGG | - | chr1.3:17079197-17079216 | None:intergenic | 40.0% |
| !! | TGGCCACGTTTTGATAATAC+TGG | - | chr1.3:17080622-17080641 | None:intergenic | 40.0% |
| !!! | CCATCCCACTTACTTTTTCT+TGG | + | chr1.3:17079724-17079743 | MS.gene25207:intron | 40.0% |
| !!! | CCCACTTACTTTTTCTTGGT+TGG | + | chr1.3:17079728-17079747 | MS.gene25207:intron | 40.0% |
| AAGCCACCCTATACATGCTA+TGG | + | chr1.3:17080678-17080697 | MS.gene25207:intron | 45.0% | |
| AAGGTTGAGGTCATGAAGGA+GGG | + | chr1.3:17078667-17078686 | MS.gene25207:CDS | 45.0% | |
| ACCATATGTTAGGGCCTTTC+CGG | - | chr1.3:17082307-17082326 | None:intergenic | 45.0% | |
| ACCCTATACATGCTATGGTG+CGG | + | chr1.3:17080683-17080702 | MS.gene25207:intron | 45.0% | |
| ACCGCACCATAGCATGTATA+GGG | - | chr1.3:17080687-17080706 | None:intergenic | 45.0% | |
| ACGCAGCATCATATATGGAC+TGG | + | chr1.3:17078358-17078377 | MS.gene25207:CDS | 45.0% | |
| ACGTAGACCCGATAAACACT+CGG | - | chr1.3:17078150-17078169 | None:intergenic | 45.0% | |
| ACTTCTCTAGTTGTCGTCGA+AGG | + | chr1.3:17081453-17081472 | MS.gene25207:CDS | 45.0% | |
| AGAAGTTGACGTAAGTGACG+AGG | + | chr1.3:17082412-17082431 | MS.gene25207:CDS | 45.0% | |
| AGCATTTGTGCAAGTGCTAG+GGG | + | chr1.3:17082059-17082078 | MS.gene25207:intron | 45.0% | |
| AGCTCAATGCAACCTGACAA+AGG | + | chr1.3:17080308-17080327 | MS.gene25207:CDS | 45.0% | |
| ATATGATGCTGCGTAACCTG+TGG | - | chr1.3:17078352-17078371 | None:intergenic | 45.0% | |
| CAGATAGTGAGAGGATGGTT+GGG | + | chr1.3:17078935-17078954 | MS.gene25207:CDS | 45.0% | |
| CGACCAATCCATGTTGAAAC+TGG | + | chr1.3:17079948-17079967 | MS.gene25207:CDS | 45.0% | |
| CTCTTGTCCGAGTGTTTATC+GGG | + | chr1.3:17078140-17078159 | MS.gene25207:CDS | 45.0% | |
| GACTAATCAGCTGAGGAGTT+CGG | - | chr1.3:17080823-17080842 | None:intergenic | 45.0% | |
| GACTTCAGATAGTGAGAGGA+TGG | + | chr1.3:17078930-17078949 | MS.gene25207:CDS | 45.0% | |
| GCAACAACGCCAAAGAAGTT+TGG | - | chr1.3:17080860-17080879 | None:intergenic | 45.0% | |
| GCCAATGGCAACTCAAATTC+AGG | + | chr1.3:17079193-17079212 | MS.gene25207:intron | 45.0% | |
| GCTCAATGCAACCTGACAAA+GGG | + | chr1.3:17080309-17080328 | MS.gene25207:CDS | 45.0% | |
| GCTCTTCAACGATGTCTCTT+GGG | + | chr1.3:17081280-17081299 | MS.gene25207:CDS | 45.0% | |
| GGGAAACAGCTGGAATGAAA+GGG | + | chr1.3:17079007-17079026 | MS.gene25207:CDS | 45.0% | |
| GTACCATCATTGCACTAGCA+TGG | - | chr1.3:17080642-17080661 | None:intergenic | 45.0% | |
| GTATTACGGTCTATGGCAGA+TGG | - | chr1.3:17081052-17081071 | None:intergenic | 45.0% | |
| GTGTGTTGGAGCAGACAATA+GGG | + | chr1.3:17079056-17079075 | MS.gene25207:CDS | 45.0% | |
| TAAGGTTGAGGTCATGAAGG+AGG | + | chr1.3:17078666-17078685 | MS.gene25207:CDS | 45.0% | |
| TATCGGGTCTACGTTTGTTC+AGG | + | chr1.3:17078156-17078175 | MS.gene25207:CDS | 45.0% | |
| TATCGGTAACTCTCCCATAG+AGG | - | chr1.3:17078834-17078853 | None:intergenic | 45.0% | |
| TATGATGCTGCGTAACCTGT+GGG | - | chr1.3:17078351-17078370 | None:intergenic | 45.0% | |
| TCAGATAGTGAGAGGATGGT+TGG | + | chr1.3:17078934-17078953 | MS.gene25207:CDS | 45.0% | |
| TCAGCAGTAACTTTGACGCT+TGG | - | chr1.3:17082371-17082390 | None:intergenic | 45.0% | |
| TCGTCACTTACGTCAACTTC+TGG | - | chr1.3:17082413-17082432 | None:intergenic | 45.0% | |
| TGAAGGTGACTAATCAGCTG+AGG | - | chr1.3:17080830-17080849 | None:intergenic | 45.0% | |
| TGCTCTTCAACGATGTCTCT+TGG | + | chr1.3:17081279-17081298 | MS.gene25207:CDS | 45.0% | |
| TGGGAAACAGCTGGAATGAA+AGG | + | chr1.3:17079006-17079025 | MS.gene25207:CDS | 45.0% | |
| TGTCTCTTGGGTGCTAAAAG+TGG | + | chr1.3:17081292-17081311 | MS.gene25207:CDS | 45.0% | |
| TGTGGTATAACCAAACGAGG+AGG | + | chr1.3:17082655-17082674 | MS.gene25207:CDS | 45.0% | |
| TTGAAAGCTTCTTCTGCACC+AGG | - | chr1.3:17078762-17078781 | None:intergenic | 45.0% | |
| ! | AACGTGTGCTGTTGTAGGAA+TGG | + | chr1.3:17079839-17079858 | MS.gene25207:intron | 45.0% |
| ! | AAGAGTAATAGGCTGGCTAC+TGG | - | chr1.3:17080772-17080791 | None:intergenic | 45.0% |
| ! | ACAGAGAGCTGCAGTCTTTT+TGG | - | chr1.3:17077927-17077946 | None:intergenic | 45.0% |
| ! | CAGCTGTTATTTGTGGCAGA+AGG | - | chr1.3:17081110-17081129 | None:intergenic | 45.0% |
| ! | CCTGTGGGCATACTTTGAAA+CGG | - | chr1.3:17078336-17078355 | None:intergenic | 45.0% |
| ! | CTCTAAACGTGTGCTGTTGT+AGG | + | chr1.3:17079834-17079853 | MS.gene25207:intron | 45.0% |
| ! | TAGGCTGCTTTGAGCAATAC+CGG | + | chr1.3:17082341-17082360 | MS.gene25207:intron | 45.0% |
| ! | TCTCTATTTGCTAGGTTGGG+AGG | + | chr1.3:17082548-17082567 | MS.gene25207:intron | 45.0% |
| ! | TGATGACTTGGCACTTGCAA+GGG | + | chr1.3:17079993-17080012 | MS.gene25207:intron | 45.0% |
| ! | TGTGCTGTTGTAGGAATGGT+GGG | + | chr1.3:17079843-17079862 | MS.gene25207:intron | 45.0% |
| ! | TGTTTCTGCTCAACAGAGGA+AGG | + | chr1.3:17078306-17078325 | MS.gene25207:CDS | 45.0% |
| ! | TTATCAGTCAGTGGTGCCAA+TGG | + | chr1.3:17079178-17079197 | MS.gene25207:intron | 45.0% |
| ! | TTGATGACTTGGCACTTGCA+AGG | + | chr1.3:17079992-17080011 | MS.gene25207:intron | 45.0% |
| ! | TTGTCAGGTTGCATTGAGCT+TGG | - | chr1.3:17080308-17080327 | None:intergenic | 45.0% |
| !! | AAAGGGCATTTGGACTTACG+AGG | + | chr1.3:17079024-17079043 | MS.gene25207:CDS | 45.0% |
| !! | AGCTGGAATGAAAGGGCATT+TGG | + | chr1.3:17079014-17079033 | MS.gene25207:CDS | 45.0% |
| !! | ATTCGGGAGCTGTTTTACAG+TGG | + | chr1.3:17077887-17077906 | MS.gene25207:CDS | 45.0% |
| !! | GGAATGGTGGGTTTATCTCT+AGG | + | chr1.3:17079855-17079874 | MS.gene25207:intron | 45.0% |
| !! | GGACTTGTTGTCAGTTCAGA+TGG | + | chr1.3:17081504-17081523 | MS.gene25207:CDS | 45.0% |
| !! | GGTGTGGTGCCATAATTGAA+AGG | - | chr1.3:17081003-17081022 | None:intergenic | 45.0% |
| AAAACACTGGGCCACTCATC+TGG | + | chr1.3:17078781-17078800 | MS.gene25207:CDS | 50.0% | |
| AAAATGGAAGGCGGTGGAGA+GGG | - | chr1.3:17080894-17080913 | None:intergenic | 50.0% | |
| AAGCAGTTGGATCGAGCACT+TGG | + | chr1.3:17078967-17078986 | MS.gene25207:CDS | 50.0% | |
| ACACAAGTGCAGGCTGAACT+TGG | + | chr1.3:17080278-17080297 | MS.gene25207:intron | 50.0% | |
| ACCGGAAAGGCCCTAACATA+TGG | + | chr1.3:17082303-17082322 | MS.gene25207:intron | 50.0% | |
| AGAGGTCATTGCCAGTGTGA+AGG | + | chr1.3:17080129-17080148 | MS.gene25207:CDS | 50.0% | |
| AGCACCTGGCAGGGAAAAAA+GGG | - | chr1.3:17081421-17081440 | None:intergenic | 50.0% | |
| AGCAGTTGGATCGAGCACTT+GGG | + | chr1.3:17078968-17078987 | MS.gene25207:CDS | 50.0% | |
| ATCAATTCCAGCACCTGGCA+GGG | - | chr1.3:17081430-17081449 | None:intergenic | 50.0% | |
| CACCGCACCATAGCATGTAT+AGG | - | chr1.3:17080688-17080707 | None:intergenic | 50.0% | |
| CATTCAAGGTGGCATTGCTC+AGG | + | chr1.3:17079890-17079909 | MS.gene25207:CDS | 50.0% | |
| CCGTTTCAAAGTATGCCCAC+AGG | + | chr1.3:17078333-17078352 | MS.gene25207:CDS | 50.0% | |
| CTGCTCCAACACACCACAAA+TGG | - | chr1.3:17079050-17079069 | None:intergenic | 50.0% | |
| CTTGCCGAACCATTTGCCTA+AGG | - | chr1.3:17080091-17080110 | None:intergenic | 50.0% | |
| GACCCAATTGCTTGCAAACG+TGG | + | chr1.3:17078030-17078049 | MS.gene25207:CDS | 50.0% | |
| GCAATGCTATCACTGGTCAC+AGG | - | chr1.3:17079125-17079144 | None:intergenic | 50.0% | |
| GCACCATAGCATGTATAGGG+TGG | - | chr1.3:17080684-17080703 | None:intergenic | 50.0% | |
| GCATTTGTGCAAGTGCTAGG+GGG | + | chr1.3:17082060-17082079 | MS.gene25207:intron | 50.0% | |
| GGCTAAGGTTGAGGTCATGA+AGG | + | chr1.3:17078663-17078682 | MS.gene25207:CDS | 50.0% | |
| GGTGTGTTGGAGCAGACAAT+AGG | + | chr1.3:17079055-17079074 | MS.gene25207:CDS | 50.0% | |
| GTGTGATCAATTCCAGCACC+TGG | - | chr1.3:17081435-17081454 | None:intergenic | 50.0% | |
| TAAAATGGAAGGCGGTGGAG+AGG | - | chr1.3:17080895-17080914 | None:intergenic | 50.0% | |
| TACGGTCTATGGCAGATGGA+TGG | - | chr1.3:17081048-17081067 | None:intergenic | 50.0% | |
| TGAGTCGGCGTCAGAAAAAC+TGG | - | chr1.3:17078512-17078531 | None:intergenic | 50.0% | |
| TGCCATAAAATGGAAGGCGG+TGG | - | chr1.3:17080900-17080919 | None:intergenic | 50.0% | |
| TGGACTTACGAGGCCATTTG+TGG | + | chr1.3:17079034-17079053 | MS.gene25207:CDS | 50.0% | |
| TGGCCATGCTAGTGCAATGA+TGG | + | chr1.3:17080636-17080655 | MS.gene25207:intron | 50.0% | |
| TGTTAGGGCCTTTCCGGTTA+AGG | - | chr1.3:17082301-17082320 | None:intergenic | 50.0% | |
| TTCTGCTCAACAGAGGAAGG+TGG | + | chr1.3:17078309-17078328 | MS.gene25207:CDS | 50.0% | |
| TTGGGTGCTAAAAGTGGAGC+AGG | + | chr1.3:17081298-17081317 | MS.gene25207:CDS | 50.0% | |
| TTGTGATTCCTCTTCAGGCG+TGG | - | chr1.3:17082590-17082609 | None:intergenic | 50.0% | |
| TTGTGGCAGAAGGCTGTTCA+TGG | - | chr1.3:17081100-17081119 | None:intergenic | 50.0% | |
| ! | AACAGGAAAGGGCACATCTG+TGG | + | chr1.3:17082637-17082656 | MS.gene25207:CDS | 50.0% |
| ! | AAGCTTGACTCGAGTTCGAC+AGG | + | chr1.3:17080544-17080563 | MS.gene25207:intron | 50.0% |
| ! | AGCTTGACTCGAGTTCGACA+GGG | + | chr1.3:17080545-17080564 | MS.gene25207:intron | 50.0% |
| ! | ATAACCAAACGAGGAGGTGC+AGG | + | chr1.3:17082661-17082680 | MS.gene25207:CDS | 50.0% |
| ! | CTCCACCGCCTTCCATTTTA+TGG | + | chr1.3:17080895-17080914 | MS.gene25207:intron | 50.0% |
| ! | GCTTCTTCGTGTTGCTACCA+GGG | + | chr1.3:17079657-17079676 | MS.gene25207:intron | 50.0% |
| ! | GTGTGCTGTTGTAGGAATGG+TGG | + | chr1.3:17079842-17079861 | MS.gene25207:intron | 50.0% |
| ! | TAACCAAACGAGGAGGTGCA+GGG | + | chr1.3:17082662-17082681 | MS.gene25207:CDS | 50.0% |
| ! | TGCTTCTTCGTGTTGCTACC+AGG | + | chr1.3:17079656-17079675 | MS.gene25207:intron | 50.0% |
| !! | GAATCGAAGGCTGTTTTCGC+TGG | - | chr1.3:17080742-17080761 | None:intergenic | 50.0% |
| !! | GGTTGGGAGGCACTATATTG+TGG | + | chr1.3:17082561-17082580 | MS.gene25207:intron | 50.0% |
| CAGCACCTGGCAGGGAAAAA+AGG | - | chr1.3:17081422-17081441 | None:intergenic | 55.0% | |
| CGAGGCCATTTGTGGTGTGT+TGG | + | chr1.3:17079042-17079061 | MS.gene25207:CDS | 55.0% | |
| CTGGCAGGGAAAAAAGGGCA+TGG | - | chr1.3:17081416-17081435 | None:intergenic | 55.0% | |
| GAGTCGGGCTGAGTCAAACT+TGG | + | chr1.3:17080487-17080506 | MS.gene25207:intron | 55.0% | |
| GATCAATTCCAGCACCTGGC+AGG | - | chr1.3:17081431-17081450 | None:intergenic | 55.0% | |
| GCTCAGGATCTTCGCTGTGA+TGG | + | chr1.3:17079906-17079925 | MS.gene25207:CDS | 55.0% | |
| GCTTCTCAGGGCTCAAACGA+AGG | + | chr1.3:17078430-17078449 | MS.gene25207:CDS | 55.0% | |
| GGACTGACAGGTGACACCTA+TGG | + | chr1.3:17079678-17079697 | MS.gene25207:CDS | 55.0% | |
| GTCGCATGTGGCTAAGGTTG+AGG | + | chr1.3:17078654-17078673 | MS.gene25207:CDS | 55.0% | |
| TGTTGCTACCAGGGACTGAC+AGG | + | chr1.3:17079666-17079685 | MS.gene25207:intron | 55.0% | |
| !! | CGCTGGTGGTGTCATGAGAA+TGG | - | chr1.3:17080725-17080744 | None:intergenic | 55.0% |
| !! | CTGACGCCGACTCATCATCA+TGG | + | chr1.3:17078518-17078537 | MS.gene25207:CDS | 55.0% |
| !! | GACTGCAGAGCCTGCTTTTG+AGG | + | chr1.3:17080361-17080380 | MS.gene25207:CDS | 55.0% |
| !! | TCGAAGGCTGTTTTCGCTGG+TGG | - | chr1.3:17080739-17080758 | None:intergenic | 55.0% |
| !!! | CATGCCCTTTTTTCCCTGCC+AGG | + | chr1.3:17081414-17081433 | MS.gene25207:intron | 55.0% |
| !!! | CTTTTTTCCCTGCCAGGTGC+TGG | + | chr1.3:17081420-17081439 | MS.gene25207:intron | 55.0% |
| AGTGAGAGGATGGTTGGGCG+TGG | + | chr1.3:17078940-17078959 | MS.gene25207:CDS | 60.0% | |
| CAACCCTGCACCTCCTCGTT+TGG | - | chr1.3:17082668-17082687 | None:intergenic | 60.0% | |
| TGGGCGTGGTGTGAAGCAGT+TGG | + | chr1.3:17078954-17078973 | MS.gene25207:CDS | 60.0% | |
| TGTGGATGCCACGCCTGAAG+AGG | + | chr1.3:17082579-17082598 | MS.gene25207:CDS | 60.0% | |
| ! | AGGTGTCACCTGTCAGTCCC+TGG | - | chr1.3:17079677-17079696 | None:intergenic | 60.0% |
| ! | CAAACGAGGAGGTGCAGGGT+TGG | + | chr1.3:17082666-17082685 | MS.gene25207:CDS | 60.0% |
| ! | CGCTCTAGGTGCTGCCATCA+AGG | + | chr1.3:17081539-17081558 | MS.gene25207:CDS | 60.0% |
| AAGGCGGTGGAGAGGGTCAC+TGG | - | chr1.3:17080887-17080906 | None:intergenic | 65.0% | |
| TATGGTGCGGTGCGCAGTGG+TGG | + | chr1.3:17080696-17080715 | MS.gene25207:intron | 65.0% | |
| TGCTATGGTGCGGTGCGCAG+TGG | + | chr1.3:17080693-17080712 | MS.gene25207:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 17077875 | 17082798 | 17077875 | ID=MS.gene25207 |
| chr1.3 | mRNA | 17077875 | 17082798 | 17077875 | ID=MS.gene25207.t1;Parent=MS.gene25207 |
| chr1.3 | exon | 17077875 | 17079077 | 17077875 | ID=MS.gene25207.t1.exon1;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17077875 | 17079077 | 17077875 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17079678 | 17079714 | 17079678 | ID=MS.gene25207.t1.exon2;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17079678 | 17079714 | 17079678 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17079856 | 17079983 | 17079856 | ID=MS.gene25207.t1.exon3;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17079856 | 17079983 | 17079856 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17080094 | 17080150 | 17080094 | ID=MS.gene25207.t1.exon4;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17080094 | 17080150 | 17080094 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17080290 | 17080382 | 17080290 | ID=MS.gene25207.t1.exon5;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17080290 | 17080382 | 17080290 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17081241 | 17081319 | 17081241 | ID=MS.gene25207.t1.exon6;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17081241 | 17081319 | 17081241 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17081436 | 17081560 | 17081436 | ID=MS.gene25207.t1.exon7;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17081436 | 17081560 | 17081436 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17082344 | 17082487 | 17082344 | ID=MS.gene25207.t1.exon8;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17082344 | 17082487 | 17082344 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| chr1.3 | exon | 17082562 | 17082798 | 17082562 | ID=MS.gene25207.t1.exon9;Parent=MS.gene25207.t1 |
| chr1.3 | CDS | 17082562 | 17082798 | 17082562 | ID=cds.MS.gene25207.t1;Parent=MS.gene25207.t1 |
| Gene Sequence |
| Protein sequence |
