Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83091.t1 | KEH40572.1 | 95.2 | 686 | 17 | 2 | 28 | 700 | 1 | 683 | 0.00E+00 | 1278.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83091.t1 | Q15024 | 37.4 | 281 | 171 | 1 | 416 | 696 | 4 | 279 | 3.0e-48 | 194.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83091.t1 | A0A072VFI7 | 95.2 | 686 | 17 | 2 | 28 | 700 | 1 | 683 | 0.0e+00 | 1278.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene83091 | 0.823923 | 1.07E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene83091 | 0.811405 | 7.12E-51 | -1.69E-46 |
| MS.gene049293 | MS.gene83091 | -0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene049473 | MS.gene83091 | 0.806065 | 9.86E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene83091 | 0.835661 | 1.47E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene83091 | 0.851503 | 8.51E-61 | -1.69E-46 |
| MS.gene049825 | MS.gene83091 | 0.864238 | 1.40E-64 | -1.69E-46 |
| MS.gene049873 | MS.gene83091 | 0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene050277 | MS.gene83091 | 0.812585 | 3.94E-51 | -1.69E-46 |
| MS.gene050303 | MS.gene83091 | 0.868422 | 6.61E-66 | -1.69E-46 |
| MS.gene050355 | MS.gene83091 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene050427 | MS.gene83091 | 0.80289 | 4.53E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene83091 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene83091 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene050885 | MS.gene83091 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene83091 | 0.816336 | 5.83E-52 | -1.69E-46 |
| MS.gene051451 | MS.gene83091 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene051574 | MS.gene83091 | 0.829897 | 3.98E-55 | -1.69E-46 |
| MS.gene051700 | MS.gene83091 | 0.828172 | 1.04E-54 | -1.69E-46 |
| MS.gene051705 | MS.gene83091 | 0.805015 | 1.64E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene83091 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene05188 | MS.gene83091 | 0.828157 | 1.05E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene83091 | 0.837185 | 6.03E-57 | -1.69E-46 |
| MS.gene052012 | MS.gene83091 | 0.813071 | 3.08E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene83091 | 0.801004 | 1.10E-48 | -1.69E-46 |
| MS.gene052376 | MS.gene83091 | 0.801869 | 7.35E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene83091 | 0.801326 | 9.49E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene83091 | 0.841417 | 4.81E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene83091 | 0.849917 | 2.38E-60 | -1.69E-46 |
| MS.gene052586 | MS.gene83091 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene83091 | 0.809949 | 1.47E-50 | -1.69E-46 |
| MS.gene052926 | MS.gene83091 | 0.800835 | 1.20E-48 | -1.69E-46 |
| MS.gene052947 | MS.gene83091 | 0.800866 | 1.18E-48 | -1.69E-46 |
| MS.gene053054 | MS.gene83091 | -0.80732 | 5.36E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene83091 | 0.844836 | 5.91E-59 | -1.69E-46 |
| MS.gene053122 | MS.gene83091 | 0.811875 | 5.62E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene83091 | 0.889082 | 3.33E-73 | -1.69E-46 |
| MS.gene053230 | MS.gene83091 | 0.825303 | 5.05E-54 | -1.69E-46 |
| MS.gene053294 | MS.gene83091 | 0.831647 | 1.48E-55 | -1.69E-46 |
| MS.gene05365 | MS.gene83091 | 0.831403 | 1.70E-55 | -1.69E-46 |
| MS.gene053953 | MS.gene83091 | 0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene83091 | 0.802801 | 4.72E-49 | -1.69E-46 |
| MS.gene053995 | MS.gene83091 | 0.829738 | 4.35E-55 | -1.69E-46 |
| MS.gene054576 | MS.gene83091 | 0.809616 | 1.73E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene83091 | 0.806624 | 7.51E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene83091 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene055166 | MS.gene83091 | 0.828743 | 7.59E-55 | -1.69E-46 |
| MS.gene055512 | MS.gene83091 | 0.81791 | 2.58E-52 | -1.69E-46 |
| MS.gene055555 | MS.gene83091 | 0.815538 | 8.78E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene83091 | 0.814052 | 1.87E-51 | -1.69E-46 |
| MS.gene055589 | MS.gene83091 | 0.816147 | 6.42E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene83091 | 0.804375 | 2.23E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene83091 | 0.842322 | 2.78E-58 | -1.69E-46 |
| MS.gene055808 | MS.gene83091 | 0.877288 | 7.09E-69 | -1.69E-46 |
| MS.gene056050 | MS.gene83091 | 0.811111 | 8.24E-51 | -1.69E-46 |
| MS.gene056091 | MS.gene83091 | 0.885596 | 7.09E-72 | -1.69E-46 |
| MS.gene056215 | MS.gene83091 | 0.818771 | 1.65E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene83091 | 0.831442 | 1.67E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene83091 | 0.858858 | 6.17E-63 | -1.69E-46 |
| MS.gene05659 | MS.gene83091 | 0.823756 | 1.17E-53 | -1.69E-46 |
| MS.gene056605 | MS.gene83091 | 0.84246 | 2.55E-58 | -1.69E-46 |
| MS.gene056631 | MS.gene83091 | 0.837221 | 5.91E-57 | -1.69E-46 |
| MS.gene056643 | MS.gene83091 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene05689 | MS.gene83091 | 0.843184 | 1.64E-58 | -1.69E-46 |
| MS.gene056986 | MS.gene83091 | 0.834128 | 3.59E-56 | -1.69E-46 |
| MS.gene057027 | MS.gene83091 | 0.801417 | 9.09E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene83091 | 0.837761 | 4.30E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene83091 | 0.804984 | 1.66E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene83091 | 0.82178 | 3.37E-53 | -1.69E-46 |
| MS.gene057555 | MS.gene83091 | 0.828436 | 9.00E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene83091 | 0.830421 | 2.96E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene83091 | 0.820856 | 5.50E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene83091 | 0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene83091 | 0.81179 | 5.87E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene83091 | 0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene83091 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene058216 | MS.gene83091 | 0.802911 | 4.48E-49 | -1.69E-46 |
| MS.gene058498 | MS.gene83091 | 0.834471 | 2.94E-56 | -1.69E-46 |
| MS.gene058500 | MS.gene83091 | 0.806119 | 9.60E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene83091 | 0.812348 | 4.44E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene83091 | 0.8219 | 3.16E-53 | -1.69E-46 |
| MS.gene05879 | MS.gene83091 | 0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene83091 | 0.805607 | 1.23E-49 | -1.69E-46 |
| MS.gene05950 | MS.gene83091 | 0.808079 | 3.69E-50 | -1.69E-46 |
| MS.gene05953 | MS.gene83091 | 0.850077 | 2.14E-60 | -1.69E-46 |
| MS.gene05954 | MS.gene83091 | 0.879526 | 1.16E-69 | -1.69E-46 |
| MS.gene059569 | MS.gene83091 | 0.814774 | 1.30E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene83091 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene83091 | 0.803213 | 3.88E-49 | -1.69E-46 |
| MS.gene059830 | MS.gene83091 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene83091 | 0.870782 | 1.12E-66 | -1.69E-46 |
| MS.gene06001 | MS.gene83091 | 0.836995 | 6.75E-57 | -1.69E-46 |
| MS.gene060365 | MS.gene83091 | 0.842062 | 3.25E-58 | -1.69E-46 |
| MS.gene060429 | MS.gene83091 | 0.877543 | 5.78E-69 | -1.69E-46 |
| MS.gene060521 | MS.gene83091 | 0.823123 | 1.64E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene83091 | 0.829106 | 6.20E-55 | -1.69E-46 |
| MS.gene060586 | MS.gene83091 | 0.837007 | 6.70E-57 | -1.69E-46 |
| MS.gene060830 | MS.gene83091 | 0.847978 | 8.21E-60 | -1.69E-46 |
| MS.gene060907 | MS.gene83091 | 0.816844 | 4.48E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene83091 | -0.808337 | 3.26E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83091.t1 | MTR_1g031820 | 95.190 | 686 | 17 | 2 | 28 | 700 | 1 | 683 | 0.0 | 1317 |
| MS.gene83091.t1 | MTR_8g077430 | 89.161 | 286 | 31 | 0 | 415 | 700 | 1 | 286 | 0.0 | 520 |
| MS.gene83091.t1 | MTR_8g077430 | 88.479 | 217 | 25 | 0 | 484 | 700 | 1 | 217 | 1.17e-134 | 395 |
| MS.gene83091.t1 | MTR_3g118420 | 75.556 | 90 | 22 | 0 | 23 | 112 | 3 | 92 | 2.37e-40 | 143 |
| MS.gene83091.t1 | MTR_1g063090 | 32.090 | 268 | 162 | 8 | 418 | 679 | 11 | 264 | 2.33e-29 | 119 |
| MS.gene83091.t1 | MTR_2g019210 | 29.286 | 280 | 179 | 7 | 418 | 691 | 11 | 277 | 3.88e-28 | 117 |
| MS.gene83091.t1 | MTR_2g019210 | 29.286 | 280 | 179 | 7 | 418 | 691 | 11 | 277 | 2.28e-27 | 116 |
| MS.gene83091.t1 | MTR_1g007060 | 29.787 | 282 | 185 | 5 | 424 | 697 | 28 | 304 | 2.02e-20 | 92.8 |
| MS.gene83091.t1 | MTR_1g007060 | 29.960 | 247 | 161 | 4 | 425 | 664 | 29 | 270 | 8.25e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83091.t1 | AT3G07750 | 80.070 | 286 | 56 | 1 | 416 | 700 | 1 | 286 | 2.44e-167 | 481 |
| MS.gene83091.t1 | AT3G07750 | 80.070 | 286 | 56 | 1 | 416 | 700 | 1 | 286 | 2.44e-167 | 481 |
| MS.gene83091.t1 | AT5G25500 | 48.492 | 398 | 186 | 8 | 28 | 415 | 32 | 420 | 6.38e-123 | 373 |
| MS.gene83091.t1 | AT3G12990 | 31.461 | 267 | 166 | 5 | 415 | 676 | 8 | 262 | 1.80e-27 | 113 |
| MS.gene83091.t1 | AT3G12990 | 31.461 | 267 | 166 | 5 | 415 | 676 | 8 | 262 | 3.36e-27 | 112 |
| MS.gene83091.t1 | AT3G12990 | 31.461 | 267 | 166 | 5 | 415 | 676 | 8 | 262 | 3.36e-27 | 112 |
| MS.gene83091.t1 | AT3G60500 | 31.086 | 267 | 167 | 7 | 415 | 676 | 8 | 262 | 1.40e-24 | 106 |
| MS.gene83091.t1 | AT3G60500 | 30.712 | 267 | 168 | 7 | 415 | 676 | 8 | 262 | 1.59e-23 | 104 |
| MS.gene83091.t1 | AT3G60500 | 30.712 | 267 | 168 | 7 | 415 | 676 | 8 | 262 | 1.59e-23 | 104 |
| MS.gene83091.t1 | AT3G60500 | 30.712 | 267 | 168 | 7 | 415 | 676 | 8 | 262 | 1.59e-23 | 104 |
| MS.gene83091.t1 | AT3G12990 | 31.100 | 209 | 129 | 4 | 415 | 620 | 8 | 204 | 3.28e-19 | 87.4 |
| MS.gene83091.t1 | AT1G60080 | 28.623 | 276 | 172 | 5 | 424 | 683 | 26 | 292 | 2.10e-18 | 87.0 |
Find 143 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAACATCTTCCCATTTC+TGG | 0.105835 | 1.2:-16642337 | None:intergenic |
| ACCTATGGTATTCATAATTT+TGG | 0.116551 | 1.2:+16643448 | MS.gene83091:CDS |
| TGCAGTTGATTTGGATTATT+TGG | 0.124181 | 1.2:+16642163 | MS.gene83091:CDS |
| TGGGTCAACTTTATTATCTT+TGG | 0.175781 | 1.2:-16641768 | None:intergenic |
| CTCATTTGTGATTCCTCTTC+AGG | 0.233900 | 1.2:-16646521 | None:intergenic |
| TTTGGATTATTTGGCTTCTC+AGG | 0.311307 | 1.2:+16642172 | MS.gene83091:CDS |
| TTATTACAGTATTACCTCTA+TGG | 0.317225 | 1.2:+16642572 | MS.gene83091:CDS |
| GGACAAAATGAGACGTGTTT+TGG | 0.325210 | 1.2:+16641932 | MS.gene83091:CDS |
| TCTCTTGTCCGAGTGTTTAT+CGG | 0.325868 | 1.2:+16641894 | MS.gene83091:CDS |
| TCCAAGTGTCATTCTTGATA+TGG | 0.333896 | 1.2:+16646619 | MS.gene83091:CDS |
| GCAAACGTGGATACAATTAA+TGG | 0.339330 | 1.2:+16641798 | MS.gene83091:CDS |
| CAGTTTCTATCTCTATTAAC+AGG | 0.340045 | 1.2:+16646549 | MS.gene83091:CDS |
| ATTCTTCTGATTCCCAGAAA+TGG | 0.349988 | 1.2:+16642324 | MS.gene83091:CDS |
| TATCCACGTTTGCAAGCAAT+TGG | 0.353099 | 1.2:-16641788 | None:intergenic |
| CGACCAATCCATGTTGAAAC+TGG | 0.353287 | 1.2:+16643703 | MS.gene83091:CDS |
| TATCGGGTCTACGTTTGTTC+AGG | 0.358312 | 1.2:+16641911 | MS.gene83091:CDS |
| TAGTAATGGCTTGTAGAATT+CGG | 0.361938 | 1.2:+16641625 | None:intergenic |
| AGCTGGAATGAAAGGGCATT+TGG | 0.362554 | 1.2:+16642769 | MS.gene83091:CDS |
| CAACCCTGCACCTCCTCGTT+TGG | 0.362588 | 1.2:-16646594 | None:intergenic |
| TGCTCTTCAACGATGTCTCT+TGG | 0.365642 | 1.2:+16645022 | MS.gene83091:CDS |
| AGGTTACGCAGCATCATATA+TGG | 0.377900 | 1.2:+16642108 | MS.gene83091:CDS |
| TCGTCACTTACGTCAACTTC+TGG | 0.393816 | 1.2:-16646339 | None:intergenic |
| ATGAAGACTTTCCCTTTGTC+AGG | 0.394376 | 1.2:-16644083 | None:intergenic |
| AAAACACTGGGCCACTCATC+TGG | 0.396971 | 1.2:+16642536 | MS.gene83091:CDS |
| TTTCTGCAGTTTGACACATC+TGG | 0.404024 | 1.2:+16646366 | MS.gene83091:CDS |
| AGTAATGGCTTGTAGAATTC+GGG | 0.410188 | 1.2:+16641626 | None:intergenic |
| AAGAACATCTTCCCATTTCT+GGG | 0.411509 | 1.2:-16642336 | None:intergenic |
| CATTCAAGGTGGCATTGCTC+AGG | 0.431527 | 1.2:+16643645 | MS.gene83091:CDS |
| TTCTTCTGATTCCCAGAAAT+GGG | 0.435961 | 1.2:+16642325 | MS.gene83091:CDS |
| CGAGCAGTTAATGAATAAGT+TGG | 0.436047 | 1.2:+16646664 | MS.gene83091:CDS |
| TGTGATAATTACTCTGACTA+AGG | 0.439782 | 1.2:+16646395 | MS.gene83091:CDS |
| GGAGAACAACATTTCATTCA+AGG | 0.439872 | 1.2:+16643631 | MS.gene83091:CDS |
| GCTCTTCAACGATGTCTCTT+GGG | 0.440822 | 1.2:+16645023 | MS.gene83091:CDS |
| CTGCTCCAACACACCACAAA+TGG | 0.442942 | 1.2:-16642802 | None:intergenic |
| AACTTTGACGCTTGGAATAC+CGG | 0.445709 | 1.2:-16646289 | None:intergenic |
| TGTTGGGATCTTTATATTGA+CGG | 0.446236 | 1.2:+16645226 | MS.gene83091:CDS |
| AATCACTCTAGGTTCCCTTT+CGG | 0.446245 | 1.2:-16642006 | None:intergenic |
| ACACAAGTGCAGGCTGAACT+TGG | 0.446246 | 1.2:+16644041 | MS.gene83091:intron |
| ACACAGATCTACTTCAATAT+CGG | 0.452155 | 1.2:-16642603 | None:intergenic |
| CGATAACAGTATTGCTTACA+AGG | 0.452528 | 1.2:+16642472 | MS.gene83091:CDS |
| ATTTGATGACCTTAGGCAAA+TGG | 0.453467 | 1.2:+16643834 | MS.gene83091:intron |
| TTGTCAGGTTGCATTGAGCT+TGG | 0.453846 | 1.2:-16644068 | None:intergenic |
| CTCTTGTCCGAGTGTTTATC+GGG | 0.454494 | 1.2:+16641895 | MS.gene83091:CDS |
| GGTGTGTTGGAGCAGACAAT+AGG | 0.458874 | 1.2:+16642810 | MS.gene83091:CDS |
| AAGCAGTTGGATCGAGCACT+TGG | 0.459065 | 1.2:+16642722 | MS.gene83091:CDS |
| TGGACTTACGAGGCCATTTG+TGG | 0.462532 | 1.2:+16642789 | MS.gene83091:CDS |
| TGCTAAATATCTACAAATCC+TGG | 0.463188 | 1.2:+16642496 | MS.gene83091:CDS |
| CGCTCTAGGTGCTGCCATCA+AGG | 0.465933 | 1.2:+16645282 | MS.gene83091:CDS |
| TTGGATTATTTGGCTTCTCA+GGG | 0.472517 | 1.2:+16642173 | MS.gene83091:CDS |
| CTATCTCTATTAACAGGAAA+GGG | 0.476100 | 1.2:+16646555 | MS.gene83091:CDS |
| ATCATGTTGTGTATTTGTGT+TGG | 0.476728 | 1.2:-16641958 | None:intergenic |
| ATAACCAAACGAGGAGGTGC+AGG | 0.480137 | 1.2:+16646590 | MS.gene83091:CDS |
| GTATATTTATATAGGGAAGA+GGG | 0.482364 | 1.2:+16644970 | MS.gene83091:intron |
| ATGTTGTGTATTTGTGTTGG+AGG | 0.484915 | 1.2:-16641955 | None:intergenic |
| TCAGCAGTAACTTTGACGCT+TGG | 0.491144 | 1.2:-16646297 | None:intergenic |
| TTGAAAGCTTCTTCTGCACC+AGG | 0.497079 | 1.2:-16642514 | None:intergenic |
| TCAGATAGTGAGAGGATGGT+TGG | 0.498427 | 1.2:+16642689 | MS.gene83091:CDS |
| TAGGCTGCTTTGAGCAATAC+CGG | 0.499103 | 1.2:+16646270 | MS.gene83091:intron |
| ATGACCTTAGGCAAATGGTT+CGG | 0.499255 | 1.2:+16643839 | MS.gene83091:intron |
| CGAGGCCATTTGTGGTGTGT+TGG | 0.500443 | 1.2:+16642797 | MS.gene83091:CDS |
| TGTATATTTATATAGGGAAG+AGG | 0.500539 | 1.2:+16644969 | MS.gene83091:intron |
| ACTCCAGTTTCAACATGGAT+TGG | 0.501265 | 1.2:-16643706 | None:intergenic |
| TCAAACGAAGGTACTACATT+GGG | 0.502961 | 1.2:+16642197 | MS.gene83091:CDS |
| AAGTTTGTATGGGAAACAGC+TGG | 0.504294 | 1.2:+16642752 | MS.gene83091:CDS |
| AGTGATTGATTCACTGACTA+AGG | 0.506669 | 1.2:+16642022 | MS.gene83091:CDS |
| ATTAAAGTCGCATGTGGCTA+AGG | 0.506689 | 1.2:+16642403 | MS.gene83091:CDS |
| GTCGCATGTGGCTAAGGTTG+AGG | 0.512828 | 1.2:+16642409 | MS.gene83091:CDS |
| GACTTCAGATAGTGAGAGGA+TGG | 0.512900 | 1.2:+16642685 | MS.gene83091:CDS |
| GGAATGGTGGGTTTATCTCT+AGG | 0.515128 | 1.2:+16643610 | MS.gene83091:intron |
| GGACTTGTTGTCAGTTCAGA+TGG | 0.517057 | 1.2:+16645247 | MS.gene83091:CDS |
| TGGGAAACAGCTGGAATGAA+AGG | 0.517632 | 1.2:+16642761 | MS.gene83091:CDS |
| ATCCACGTTTGCAAGCAATT+GGG | 0.518012 | 1.2:-16641787 | None:intergenic |
| CAGATAGTGAGAGGATGGTT+GGG | 0.520974 | 1.2:+16642690 | MS.gene83091:CDS |
| GTGTGTTGGAGCAGACAATA+GGG | 0.521939 | 1.2:+16642811 | MS.gene83091:CDS |
| TCTATCTCTATTAACAGGAA+AGG | 0.524743 | 1.2:+16646554 | MS.gene83091:CDS |
| TGTTGCTACCAGGGACTGAC+AGG | 0.527873 | 1.2:+16643421 | MS.gene83091:intron |
| TTGGGTGCTAAAAGTGGAGC+AGG | 0.530873 | 1.2:+16645041 | MS.gene83091:CDS |
| TGTCTCTTGGGTGCTAAAAG+TGG | 0.537968 | 1.2:+16645035 | MS.gene83091:CDS |
| GCTCAATGCAACCTGACAAA+GGG | 0.537976 | 1.2:+16644072 | MS.gene83091:CDS |
| CTGACGCCGACTCATCATCA+TGG | 0.543822 | 1.2:+16642273 | MS.gene83091:CDS |
| TATTACAGTATTACCTCTAT+GGG | 0.544003 | 1.2:+16642573 | MS.gene83091:CDS |
| GGAAATTTGTTAGACGCTCT+AGG | 0.547273 | 1.2:+16645268 | MS.gene83091:CDS |
| GCTCAGGATCTTCGCTGTGA+TGG | 0.551212 | 1.2:+16643661 | MS.gene83091:CDS |
| CATTCTTGATATGGTATCTG+TGG | 0.557275 | 1.2:+16646628 | MS.gene83091:CDS |
| GAATATGCAACCTCAAAAGC+AGG | 0.557617 | 1.2:-16644134 | None:intergenic |
| CCTGTGGGCATACTTTGAAA+CGG | 0.559647 | 1.2:-16642088 | None:intergenic |
| GACCCAATTGCTTGCAAACG+TGG | 0.559854 | 1.2:+16641785 | MS.gene83091:CDS |
| TTAGTCAGAGTAATTATCAC+AGG | 0.560528 | 1.2:-16646393 | None:intergenic |
| TGAAACTGGAGTTATTCCTC+AGG | 0.561714 | 1.2:+16643717 | MS.gene83091:CDS |
| GCTTCTCAGGGCTCAAACGA+AGG | 0.563728 | 1.2:+16642185 | MS.gene83091:CDS |
| CAAACGAGGAGGTGCAGGGT+TGG | 0.566265 | 1.2:+16646595 | MS.gene83091:CDS |
| TATATTTATATAGGGAAGAG+GGG | 0.568714 | 1.2:+16644971 | MS.gene83091:intron |
| TTTCAGTAAAACAACCGAAA+GGG | 0.575185 | 1.2:+16641992 | MS.gene83091:CDS |
| TGTGGATGCCACGCCTGAAG+AGG | 0.575584 | 1.2:+16646508 | MS.gene83091:CDS |
| GGACTGACAGGTGACACCTA+TGG | 0.577446 | 1.2:+16643433 | MS.gene83091:CDS |
| GTCAGTGAATCAATCACTCT+AGG | 0.577579 | 1.2:-16642017 | None:intergenic |
| TTTACGACATGCAATGGTAT+CGG | 0.577995 | 1.2:+16641736 | MS.gene83091:CDS |
| TCTCTATTTGCTAGGTTGGG+AGG | 0.581168 | 1.2:+16646477 | MS.gene83091:intron |
| AGAGGTCATTGCCAGTGTGA+AGG | 0.582587 | 1.2:+16643884 | MS.gene83091:CDS |
| GGCTAAGGTTGAGGTCATGA+AGG | 0.583224 | 1.2:+16642418 | MS.gene83091:CDS |
| ACCAAAATTATGAATACCAT+AGG | 0.583328 | 1.2:-16643449 | None:intergenic |
| CGTAAACATCTTGTGAAGAG+TGG | 0.584263 | 1.2:-16641719 | None:intergenic |
| TGTTTCTGCTCAACAGAGGA+AGG | 0.585615 | 1.2:+16642061 | MS.gene83091:CDS |
| CCGTTTCAAAGTATGCCCAC+AGG | 0.587026 | 1.2:+16642088 | MS.gene83091:CDS |
| GGTTGGGAGGCACTATATTG+TGG | 0.587146 | 1.2:+16646490 | MS.gene83091:intron |
| TGTGCTGTTGTAGGAATGGT+GGG | 0.589107 | 1.2:+16643598 | MS.gene83091:intron |
| CTTCATCCATGATGATGAGT+CGG | 0.589560 | 1.2:-16642279 | None:intergenic |
| CTCAAACGAAGGTACTACAT+TGG | 0.590470 | 1.2:+16642196 | MS.gene83091:CDS |
| TGGGCGTGGTGTGAAGCAGT+TGG | 0.590551 | 1.2:+16642709 | MS.gene83091:CDS |
| TTGTGATTCCTCTTCAGGCG+TGG | 0.591330 | 1.2:-16646516 | None:intergenic |
| ACGCAGCATCATATATGGAC+TGG | 0.593009 | 1.2:+16642113 | MS.gene83091:CDS |
| TATCGGTAACTCTCCCATAG+AGG | 0.594976 | 1.2:-16642586 | None:intergenic |
| ACCATATCAAGAATGACACT+TGG | 0.596140 | 1.2:-16646620 | None:intergenic |
| GGGAAACAGCTGGAATGAAA+GGG | 0.597117 | 1.2:+16642762 | MS.gene83091:CDS |
| TTGAAGTAGATCTGTGTGGT+GGG | 0.597240 | 1.2:+16642609 | MS.gene83091:CDS |
| AGCTCAATGCAACCTGACAA+AGG | 0.602731 | 1.2:+16644071 | MS.gene83091:CDS |
| AAGATGTTTACGACATGCAA+TGG | 0.608117 | 1.2:+16641730 | MS.gene83091:CDS |
| TAAGGTTGAGGTCATGAAGG+AGG | 0.611559 | 1.2:+16642421 | MS.gene83091:CDS |
| GAATAACTCCAGTTTCAACA+TGG | 0.614523 | 1.2:-16643711 | None:intergenic |
| AACAGGAAAGGGCACATCTG+TGG | 0.618289 | 1.2:+16646566 | MS.gene83091:CDS |
| ATGTGCTGTTGTAGGAATGG+TGG | 0.624448 | 1.2:+16643597 | MS.gene83091:intron |
| TGAATAAGCAACCAGATGAG+TGG | 0.633002 | 1.2:-16642547 | None:intergenic |
| AGTGAGAGGATGGTTGGGCG+TGG | 0.634026 | 1.2:+16642695 | MS.gene83091:CDS |
| AAGGTTGAGGTCATGAAGGA+GGG | 0.634710 | 1.2:+16642422 | MS.gene83091:CDS |
| AGCAGTTGGATCGAGCACTT+GGG | 0.640857 | 1.2:+16642723 | MS.gene83091:CDS |
| TAACCAAACGAGGAGGTGCA+GGG | 0.641504 | 1.2:+16646591 | MS.gene83091:CDS |
| ACTTCTCTAGTTGTCGTCGA+AGG | 0.641982 | 1.2:+16645196 | MS.gene83091:CDS |
| CTTTCAGTAAAACAACCGAA+AGG | 0.649469 | 1.2:+16641991 | MS.gene83091:CDS |
| AACAAGATTAAAGTCGCATG+TGG | 0.652178 | 1.2:+16642397 | MS.gene83091:CDS |
| ATATTTATATAGGGAAGAGG+GGG | 0.653215 | 1.2:+16644972 | MS.gene83091:intron |
| TTGATGTTTCTGCTCAACAG+AGG | 0.657003 | 1.2:+16642057 | MS.gene83091:CDS |
| GAACAACATTTCATTCAAGG+TGG | 0.667860 | 1.2:+16643634 | MS.gene83091:CDS |
| ATTGAAGTAGATCTGTGTGG+TGG | 0.671996 | 1.2:+16642608 | MS.gene83091:CDS |
| ATCTGTGGTATAACCAAACG+AGG | 0.678878 | 1.2:+16646581 | MS.gene83091:CDS |
| ACGTAGACCCGATAAACACT+CGG | 0.683313 | 1.2:-16641902 | None:intergenic |
| AAAGGGCATTTGGACTTACG+AGG | 0.683908 | 1.2:+16642779 | MS.gene83091:CDS |
| TATGATGCTGCGTAACCTGT+GGG | 0.691436 | 1.2:-16642103 | None:intergenic |
| TTCTGCTCAACAGAGGAAGG+TGG | 0.698018 | 1.2:+16642064 | MS.gene83091:CDS |
| ATATGATGCTGCGTAACCTG+TGG | 0.701943 | 1.2:-16642104 | None:intergenic |
| TAGTCAGAGTAATTATCACA+GGG | 0.704592 | 1.2:-16646392 | None:intergenic |
| AGAAGTTGACGTAAGTGACG+AGG | 0.710797 | 1.2:+16646341 | MS.gene83091:CDS |
| TGTGGTATAACCAAACGAGG+AGG | 0.748915 | 1.2:+16646584 | MS.gene83091:CDS |
| GATATTGAAGTAGATCTGTG+TGG | 0.793807 | 1.2:+16642605 | MS.gene83091:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTTTGTATATTTATATA+GGG | + | chr1.2:16644963-16644982 | MS.gene83091:intron | 10.0% |
| !!! | ATTTTAAAAATTAAACAACT+AGG | - | chr1.2:16645819-16645838 | None:intergenic | 10.0% |
| !!! | TATCTTTTGTATATTTATAT+AGG | + | chr1.2:16644962-16644981 | MS.gene83091:intron | 10.0% |
| !!! | TCAATATAATTAGTTTTATT+TGG | + | chr1.2:16644932-16644951 | MS.gene83091:intron | 10.0% |
| !!! | TTATTTTTTTTTCTCTTTTT+TGG | + | chr1.2:16644691-16644710 | MS.gene83091:intron | 10.0% |
| !! | AAAACTCCTATTTATAAAAA+AGG | - | chr1.2:16645724-16645743 | None:intergenic | 15.0% |
| !! | AATTCAAATAAGTAGTAAAT+AGG | - | chr1.2:16645956-16645975 | None:intergenic | 15.0% |
| !! | TTAATAAGTTACTAATGTTA+TGG | - | chr1.2:16643265-16643284 | None:intergenic | 15.0% |
| !! | TTATATAAGTATCTTGAATA+GGG | + | chr1.2:16644219-16644238 | MS.gene83091:intron | 15.0% |
| !!! | AGTTTTTTTTTTTATCAAAG+AGG | - | chr1.2:16646138-16646157 | None:intergenic | 15.0% |
| !!! | GAGAATATAAAGATATTTTT+AGG | + | chr1.2:16645909-16645928 | MS.gene83091:intron | 15.0% |
| !!! | TATATCAATAAAAGTACAAA+GGG | - | chr1.2:16643565-16643584 | None:intergenic | 15.0% |
| !! | AAAATGTTTGTTCACTTAAA+AGG | - | chr1.2:16644673-16644692 | None:intergenic | 20.0% |
| !! | AAATGAGATAATGTGAAATT+GGG | + | chr1.2:16643062-16643081 | MS.gene83091:intron | 20.0% |
| !! | AAATGTTTGTTCACTTAAAA+GGG | - | chr1.2:16644672-16644691 | None:intergenic | 20.0% |
| !! | ATATAATGAACAAGACAAAT+TGG | - | chr1.2:16645635-16645654 | None:intergenic | 20.0% |
| !! | GATAATACAAACATGATATT+GGG | + | chr1.2:16645665-16645684 | MS.gene83091:intron | 20.0% |
| !! | GTCTATAAAAGTAACAAATA+TGG | - | chr1.2:16644767-16644786 | None:intergenic | 20.0% |
| !! | GTTATATAAGTATCTTGAAT+AGG | + | chr1.2:16644218-16644237 | MS.gene83091:intron | 20.0% |
| !! | TATCATGTTTGTATTATCAA+TGG | - | chr1.2:16645663-16645682 | None:intergenic | 20.0% |
| !! | TCTTTATATTCTCAACATTA+TGG | - | chr1.2:16645902-16645921 | None:intergenic | 20.0% |
| !! | TGATAATACAAACATGATAT+TGG | + | chr1.2:16645664-16645683 | MS.gene83091:intron | 20.0% |
| !! | TGTACTATTAAACTAAAGTA+AGG | - | chr1.2:16643953-16643972 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAATAAGAACAT+TGG | - | chr1.2:16645114-16645133 | None:intergenic | 20.0% |
| !! | TTTCAAAATATTAGTTGTGT+CGG | + | chr1.2:16645453-16645472 | MS.gene83091:intron | 20.0% |
| !! | TTTCATAAACTAACTTGAAA+AGG | - | chr1.2:16646068-16646087 | None:intergenic | 20.0% |
| !!! | AAAAAAGTCAAGAAGTATAA+AGG | - | chr1.2:16643187-16643206 | None:intergenic | 20.0% |
| !!! | AATTATATTGAAGCACTAAA+AGG | - | chr1.2:16644923-16644942 | None:intergenic | 20.0% |
| !!! | ATTCTACTATAGCATTTTTT+GGG | + | chr1.2:16643385-16643404 | MS.gene83091:intron | 20.0% |
| !!! | CTATATCAATAAAAGTACAA+AGG | - | chr1.2:16643566-16643585 | None:intergenic | 20.0% |
| !!! | TCAGAAGAATTAACAATTTT+TGG | - | chr1.2:16642314-16642333 | None:intergenic | 20.0% |
| !!! | TTTTCATAAAAGTTGTAAGT+TGG | - | chr1.2:16646091-16646110 | None:intergenic | 20.0% |
| ! | AAAGAAATAAGAACATTGGA+AGG | - | chr1.2:16645110-16645129 | None:intergenic | 25.0% |
| ! | AAGAAATAAGAACATTGGAA+GGG | - | chr1.2:16645109-16645128 | None:intergenic | 25.0% |
| ! | AATAACAAGAACCATATGTT+AGG | - | chr1.2:16646246-16646265 | None:intergenic | 25.0% |
| ! | AATGAGATAATGTGAAATTG+GGG | + | chr1.2:16643063-16643082 | MS.gene83091:intron | 25.0% |
| ! | ACCAAAATTATGAATACCAT+AGG | - | chr1.2:16643452-16643471 | None:intergenic | 25.0% |
| ! | ACTCCTATTTATAAAAAAGG+AGG | - | chr1.2:16645721-16645740 | None:intergenic | 25.0% |
| ! | ATAAAAATGGAAATGATAGC+AGG | + | chr1.2:16642636-16642655 | MS.gene83091:CDS | 25.0% |
| ! | ATAACAAGAACCATATGTTA+GGG | - | chr1.2:16646245-16646264 | None:intergenic | 25.0% |
| ! | CAAAAAATGCTATAGTAGAA+TGG | - | chr1.2:16643386-16643405 | None:intergenic | 25.0% |
| ! | CAAATGAGATAATGTGAAAT+TGG | + | chr1.2:16643061-16643080 | MS.gene83091:intron | 25.0% |
| ! | CTCAATTTGATCATCAAAAA+TGG | - | chr1.2:16641853-16641872 | None:intergenic | 25.0% |
| ! | CTCCTATTTATAAAAAAGGA+GGG | - | chr1.2:16645720-16645739 | None:intergenic | 25.0% |
| ! | CTTGAAAAAGATGATGATAA+TGG | + | chr1.2:16645531-16645550 | MS.gene83091:intron | 25.0% |
| ! | GTATATTTATATAGGGAAGA+GGG | + | chr1.2:16644970-16644989 | MS.gene83091:intron | 25.0% |
| ! | TAAAAGTAACAAATATGGTG+TGG | - | chr1.2:16644762-16644781 | None:intergenic | 25.0% |
| ! | TATATTTATATAGGGAAGAG+GGG | + | chr1.2:16644971-16644990 | MS.gene83091:intron | 25.0% |
| ! | TATTACAGTATTACCTCTAT+GGG | + | chr1.2:16642573-16642592 | MS.gene83091:CDS | 25.0% |
| ! | TCCTATTTATAAAAAAGGAG+GGG | - | chr1.2:16645719-16645738 | None:intergenic | 25.0% |
| ! | TGAATAAAGAAAAATTCAGC+TGG | - | chr1.2:16643796-16643815 | None:intergenic | 25.0% |
| ! | TGTATATTTATATAGGGAAG+AGG | + | chr1.2:16644969-16644988 | MS.gene83091:intron | 25.0% |
| ! | TTATTACAGTATTACCTCTA+TGG | + | chr1.2:16642572-16642591 | MS.gene83091:CDS | 25.0% |
| ! | TTCTACTGATCATACTATAT+TGG | + | chr1.2:16644016-16644035 | MS.gene83091:intron | 25.0% |
| !! | ACCTATGGTATTCATAATTT+TGG | + | chr1.2:16643448-16643467 | MS.gene83091:CDS | 25.0% |
| !! | AGAAAACTAACGTGATTTTA+AGG | - | chr1.2:16644000-16644019 | None:intergenic | 25.0% |
| !! | GAAAACTAACGTGATTTTAA+GGG | - | chr1.2:16643999-16644018 | None:intergenic | 25.0% |
| !! | GAAATGCTATTCTCATTTTA+TGG | - | chr1.2:16645565-16645584 | None:intergenic | 25.0% |
| !! | GAATAATTTTGCAGTTGATT+TGG | + | chr1.2:16642154-16642173 | MS.gene83091:CDS | 25.0% |
| !!! | AATACCATCTTATTTTACAC+TGG | + | chr1.2:16642900-16642919 | MS.gene83091:intron | 25.0% |
| !!! | AATCTGATGCAAAAGTATTA+CGG | - | chr1.2:16644809-16644828 | None:intergenic | 25.0% |
| !!! | ATGGTTCTTGTTATTCTTTT+AGG | + | chr1.2:16646251-16646270 | MS.gene83091:intron | 25.0% |
| !!! | CATTCTACTATAGCATTTTT+TGG | + | chr1.2:16643384-16643403 | MS.gene83091:intron | 25.0% |
| !!! | GAAGAATTAACAATTTTTGG+AGG | - | chr1.2:16642311-16642330 | None:intergenic | 25.0% |
| !!! | TAAATAGGAGTTTTGTGAAA+TGG | + | chr1.2:16645730-16645749 | MS.gene83091:intron | 25.0% |
| !!! | TATTCATAATTTTGGTATGG+TGG | + | chr1.2:16643456-16643475 | MS.gene83091:intron | 25.0% |
| !!! | TGGTATTCATAATTTTGGTA+TGG | + | chr1.2:16643453-16643472 | MS.gene83091:intron | 25.0% |
| !!! | TTCTACTATAGCATTTTTTG+GGG | + | chr1.2:16643386-16643405 | MS.gene83091:intron | 25.0% |
| !!! | TTTTAGGATAAGATTGTGTT+TGG | + | chr1.2:16645925-16645944 | MS.gene83091:intron | 25.0% |
| AACCAATTGCAAGATCATTT+GGG | - | chr1.2:16645844-16645863 | None:intergenic | 30.0% | |
| AAGAAGCTTTCAAAAACACT+GGG | + | chr1.2:16642524-16642543 | MS.gene83091:CDS | 30.0% | |
| AATAGGGTTCTTAGATATAG+AGG | + | chr1.2:16642827-16642846 | MS.gene83091:intron | 30.0% | |
| ACACAGATCTACTTCAATAT+CGG | - | chr1.2:16642606-16642625 | None:intergenic | 30.0% | |
| ATAAGTATCTTGAATAGGGA+TGG | + | chr1.2:16644223-16644242 | MS.gene83091:intron | 30.0% | |
| ATAGGGTTCTTAGATATAGA+GGG | + | chr1.2:16642828-16642847 | MS.gene83091:intron | 30.0% | |
| ATATTTATATAGGGAAGAGG+GGG | + | chr1.2:16644972-16644991 | MS.gene83091:intron | 30.0% | |
| ATCATGTTGTGTATTTGTGT+TGG | - | chr1.2:16641961-16641980 | None:intergenic | 30.0% | |
| ATGCATAATCTTCAGTATAG+TGG | + | chr1.2:16643360-16643379 | MS.gene83091:intron | 30.0% | |
| CAATCCAGTGTAAAATAAGA+TGG | - | chr1.2:16642907-16642926 | None:intergenic | 30.0% | |
| CAGTTTCTATCTCTATTAAC+AGG | + | chr1.2:16646549-16646568 | MS.gene83091:CDS | 30.0% | |
| CATGTTAAACTATCTTGGAT+TGG | + | chr1.2:16643512-16643531 | MS.gene83091:intron | 30.0% | |
| CCTATTTATAAAAAAGGAGG+GGG | - | chr1.2:16645718-16645737 | None:intergenic | 30.0% | |
| CTATCTCTATTAACAGGAAA+GGG | + | chr1.2:16646555-16646574 | MS.gene83091:CDS | 30.0% | |
| GTGAAGTCAATCAAATATTC+TGG | + | chr1.2:16644185-16644204 | MS.gene83091:intron | 30.0% | |
| TAACCAATTGCAAGATCATT+TGG | - | chr1.2:16645845-16645864 | None:intergenic | 30.0% | |
| TAGCTAAAGTGAAGAGTAAT+AGG | - | chr1.2:16644527-16644546 | None:intergenic | 30.0% | |
| TAGTCAGAGTAATTATCACA+GGG | - | chr1.2:16646395-16646414 | None:intergenic | 30.0% | |
| TCATACAATCTCTATTTGCT+AGG | + | chr1.2:16646469-16646488 | MS.gene83091:intron | 30.0% | |
| TCCAATGTAATTACAAGTGT+CGG | - | chr1.2:16645422-16645441 | None:intergenic | 30.0% | |
| TCTATCTCTATTAACAGGAA+AGG | + | chr1.2:16646554-16646573 | MS.gene83091:CDS | 30.0% | |
| TGATCTTGCAATTGGTTAAA+TGG | + | chr1.2:16645847-16645866 | MS.gene83091:intron | 30.0% | |
| TGCTAAATATCTACAAATCC+TGG | + | chr1.2:16642496-16642515 | MS.gene83091:CDS | 30.0% | |
| TGCTTCATGTTAAACTATCT+TGG | + | chr1.2:16643507-16643526 | MS.gene83091:intron | 30.0% | |
| TGGGTCAACTTTATTATCTT+TGG | - | chr1.2:16641771-16641790 | None:intergenic | 30.0% | |
| TGTGATAATTACTCTGACTA+AGG | + | chr1.2:16646395-16646414 | MS.gene83091:CDS | 30.0% | |
| TGTTGGGATCTTTATATTGA+CGG | + | chr1.2:16645226-16645245 | MS.gene83091:CDS | 30.0% | |
| TTAGTCAGAGTAATTATCAC+AGG | - | chr1.2:16646396-16646415 | None:intergenic | 30.0% | |
| TTCACAATGTCATGAAAGAA+TGG | - | chr1.2:16645600-16645619 | None:intergenic | 30.0% | |
| TTGAATTAGTTATCAGTCAG+TGG | + | chr1.2:16642924-16642943 | MS.gene83091:intron | 30.0% | |
| TTTCAGTAAAACAACCGAAA+GGG | + | chr1.2:16641992-16642011 | MS.gene83091:CDS | 30.0% | |
| TTTCCAGTATTATCAAAACG+TGG | + | chr1.2:16644360-16644379 | MS.gene83091:intron | 30.0% | |
| ! | ATCATGAAAGTCGTCAATTT+TGG | + | chr1.2:16643284-16643303 | MS.gene83091:intron | 30.0% |
| ! | TGTGGTGGGATTTATAAAAA+TGG | + | chr1.2:16642623-16642642 | MS.gene83091:CDS | 30.0% |
| !! | AGATGATGATAATGGATTCT+AGG | + | chr1.2:16645539-16645558 | MS.gene83091:intron | 30.0% |
| !! | ATTTTAACAAACCTTCACAC+TGG | - | chr1.2:16643898-16643917 | None:intergenic | 30.0% |
| !! | GTGAAGGTTTGTTAAAATGT+TGG | + | chr1.2:16643900-16643919 | MS.gene83091:intron | 30.0% |
| !! | TGCAGTTGATTTGGATTATT+TGG | + | chr1.2:16642163-16642182 | MS.gene83091:CDS | 30.0% |
| !! | TTTCGGTTGTTTTACTGAAA+GGG | - | chr1.2:16641992-16642011 | None:intergenic | 30.0% |
| !!! | CATTTTAAGTTGTACCTTGA+TGG | - | chr1.2:16645299-16645318 | None:intergenic | 30.0% |
| AAAATCAGGGGAGAAACATT+TGG | - | chr1.2:16643006-16643025 | None:intergenic | 35.0% | |
| AAAGAAAAATTCAGCTGGCT+GGG | - | chr1.2:16643791-16643810 | None:intergenic | 35.0% | |
| AACAAGATTAAAGTCGCATG+TGG | + | chr1.2:16642397-16642416 | MS.gene83091:CDS | 35.0% | |
| AAGAACATCTTCCCATTTCT+GGG | - | chr1.2:16642339-16642358 | None:intergenic | 35.0% | |
| AAGATGTTTACGACATGCAA+TGG | + | chr1.2:16641730-16641749 | MS.gene83091:CDS | 35.0% | |
| AAGCATTTGTGCAAATGCTA+GGG | + | chr1.2:16645988-16646007 | MS.gene83091:intron | 35.0% | |
| AAGGGAACTTTGCCATAAAA+TGG | - | chr1.2:16644654-16644673 | None:intergenic | 35.0% | |
| ACCATATCAAGAATGACACT+TGG | - | chr1.2:16646623-16646642 | None:intergenic | 35.0% | |
| ACCGACACTTGTAATTACAT+TGG | + | chr1.2:16645418-16645437 | MS.gene83091:intron | 35.0% | |
| AGAAGTTTGGCAGTAAATGA+AGG | - | chr1.2:16644591-16644610 | None:intergenic | 35.0% | |
| AGAGAATACACAGATGAATG+AGG | - | chr1.2:16643153-16643172 | None:intergenic | 35.0% | |
| AGGAAACTAGGTAACAAATG+TGG | + | chr1.2:16643028-16643047 | MS.gene83091:intron | 35.0% | |
| ATACTTATGCCTAAAACCGA+TGG | + | chr1.2:16643223-16643242 | MS.gene83091:intron | 35.0% | |
| ATCCCAAATGATCTTGCAAT+TGG | + | chr1.2:16645839-16645858 | MS.gene83091:intron | 35.0% | |
| ATGTTGTGTATTTGTGTTGG+AGG | - | chr1.2:16641958-16641977 | None:intergenic | 35.0% | |
| ATTCTTCTGATTCCCAGAAA+TGG | + | chr1.2:16642324-16642343 | MS.gene83091:CDS | 35.0% | |
| ATTTGAAAGGGAACAGAACA+AGG | - | chr1.2:16644733-16644752 | None:intergenic | 35.0% | |
| CATTCTTGATATGGTATCTG+TGG | + | chr1.2:16646628-16646647 | MS.gene83091:CDS | 35.0% | |
| CATTTACTGCCAAACTTCTT+TGG | + | chr1.2:16644592-16644611 | MS.gene83091:intron | 35.0% | |
| CCAACCAAGAAAAAGTAAGT+GGG | - | chr1.2:16643486-16643505 | None:intergenic | 35.0% | |
| CGAGCAGTTAATGAATAAGT+TGG | + | chr1.2:16646664-16646683 | MS.gene83091:CDS | 35.0% | |
| CGATAACAGTATTGCTTACA+AGG | + | chr1.2:16642472-16642491 | MS.gene83091:CDS | 35.0% | |
| CTTTCAGTAAAACAACCGAA+AGG | + | chr1.2:16641991-16642010 | MS.gene83091:CDS | 35.0% | |
| GAACAACATTTCATTCAAGG+TGG | + | chr1.2:16643634-16643653 | MS.gene83091:CDS | 35.0% | |
| GAACTTTGCCATAAAATGGA+AGG | - | chr1.2:16644650-16644669 | None:intergenic | 35.0% | |
| GAAGAAGCTTTCAAAAACAC+TGG | + | chr1.2:16642523-16642542 | MS.gene83091:CDS | 35.0% | |
| GAATAACTCCAGTTTCAACA+TGG | - | chr1.2:16643714-16643733 | None:intergenic | 35.0% | |
| GATATTGAAGTAGATCTGTG+TGG | + | chr1.2:16642605-16642624 | MS.gene83091:CDS | 35.0% | |
| GCAAACGTGGATACAATTAA+TGG | + | chr1.2:16641798-16641817 | MS.gene83091:CDS | 35.0% | |
| GGAGAACAACATTTCATTCA+AGG | + | chr1.2:16643631-16643650 | MS.gene83091:CDS | 35.0% | |
| GTTCTGTTCCCTTTCAAATA+TGG | + | chr1.2:16644734-16644753 | MS.gene83091:intron | 35.0% | |
| TAAAGAAAAATTCAGCTGGC+TGG | - | chr1.2:16643792-16643811 | None:intergenic | 35.0% | |
| TAAAGTGAAGAGTAATAGGC+TGG | - | chr1.2:16644523-16644542 | None:intergenic | 35.0% | |
| TACACAAACACAACCTTAAC+CGG | + | chr1.2:16646214-16646233 | MS.gene83091:intron | 35.0% | |
| TCATGAAAGAATGGTCACTT+CGG | - | chr1.2:16645591-16645610 | None:intergenic | 35.0% | |
| TCGTCGAAGGAAAAATTTGT+TGG | + | chr1.2:16645209-16645228 | MS.gene83091:CDS | 35.0% | |
| TCTTGCAATTGGTTAAATGG+AGG | + | chr1.2:16645850-16645869 | MS.gene83091:intron | 35.0% | |
| TTAGAGAAGACCACAAGATT+CGG | - | chr1.2:16645767-16645786 | None:intergenic | 35.0% | |
| TTCTTCTGATTCCCAGAAAT+GGG | + | chr1.2:16642325-16642344 | MS.gene83091:CDS | 35.0% | |
| TTTACGACATGCAATGGTAT+CGG | + | chr1.2:16641736-16641755 | MS.gene83091:CDS | 35.0% | |
| ! | AAAGCATTTGTGCAAATGCT+AGG | + | chr1.2:16645987-16646006 | MS.gene83091:intron | 35.0% |
| ! | ACAATCTCTATTTGCTAGGT+TGG | + | chr1.2:16646473-16646492 | MS.gene83091:intron | 35.0% |
| ! | AGTGATTGATTCACTGACTA+AGG | + | chr1.2:16642022-16642041 | MS.gene83091:CDS | 35.0% |
| ! | ATTTGATGACCTTAGGCAAA+TGG | + | chr1.2:16643834-16643853 | MS.gene83091:intron | 35.0% |
| ! | CAATCTCTATTTGCTAGGTT+GGG | + | chr1.2:16646474-16646493 | MS.gene83091:intron | 35.0% |
| ! | CGCTTTTACAGCATTTAATC+AGG | - | chr1.2:16642376-16642395 | None:intergenic | 35.0% |
| ! | CGTCGAAGGAAAAATTTGTT+GGG | + | chr1.2:16645210-16645229 | MS.gene83091:CDS | 35.0% |
| ! | TAAATGGAGGTTTTTGCTCA+TGG | + | chr1.2:16645863-16645882 | MS.gene83091:intron | 35.0% |
| ! | TCCAAGTGTCATTCTTGATA+TGG | + | chr1.2:16646619-16646638 | MS.gene83091:CDS | 35.0% |
| ! | TTCGTACATTTGATGACCTT+AGG | + | chr1.2:16643827-16643846 | MS.gene83091:intron | 35.0% |
| ! | TTGGATTATTTGGCTTCTCA+GGG | + | chr1.2:16642173-16642192 | MS.gene83091:CDS | 35.0% |
| ! | TTTGGATTATTTGGCTTCTC+AGG | + | chr1.2:16642172-16642191 | MS.gene83091:CDS | 35.0% |
| !! | ACCTAGTTTCCTCTAAAATC+AGG | - | chr1.2:16643020-16643039 | None:intergenic | 35.0% |
| !! | AGTAAAAATTGGTGCTACAG+AGG | + | chr1.2:16643866-16643885 | MS.gene83091:CDS | 35.0% |
| !! | CCTAGTTTCCTCTAAAATCA+GGG | - | chr1.2:16643019-16643038 | None:intergenic | 35.0% |
| !! | CTAGTTTCCTCTAAAATCAG+GGG | - | chr1.2:16643018-16643037 | None:intergenic | 35.0% |
| !! | CTTTCGGTTGTTTTACTGAA+AGG | - | chr1.2:16641993-16642012 | None:intergenic | 35.0% |
| !! | TCAAACGAAGGTACTACATT+GGG | + | chr1.2:16642197-16642216 | MS.gene83091:CDS | 35.0% |
| !! | TGCAAAAGTATTACGGTCTA+TGG | - | chr1.2:16644802-16644821 | None:intergenic | 35.0% |
| !! | TTCGGTTGTTTTACTGAAAG+GGG | - | chr1.2:16641991-16642010 | None:intergenic | 35.0% |
| !!! | ACATAATCACCATCGGTTTT+AGG | - | chr1.2:16643235-16643254 | None:intergenic | 35.0% |
| !!! | ATTGGGGAAAAGTATTTTGC+TGG | + | chr1.2:16643079-16643098 | MS.gene83091:intron | 35.0% |
| !!! | CCCCCTCCTTTTTTATAAAT+AGG | + | chr1.2:16645715-16645734 | MS.gene83091:intron | 35.0% |
| !!! | GGGAACATGTATTTTTTGCA+CGG | + | chr1.2:16642848-16642867 | MS.gene83091:intron | 35.0% |
| !!! | TGGGCTTTTCAAGTTTGTAT+GGG | + | chr1.2:16642742-16642761 | MS.gene83091:CDS | 35.0% |
| !!! | TTGGGCTTTTCAAGTTTGTA+TGG | + | chr1.2:16642741-16642760 | MS.gene83091:CDS | 35.0% |
| !!! | TTTTGACTTCAGATAGTGAG+AGG | + | chr1.2:16642681-16642700 | MS.gene83091:CDS | 35.0% |
| !!! | TTTTTCAAGCCTATGAAGCA+CGG | - | chr1.2:16645520-16645539 | None:intergenic | 35.0% |
| AACTTGAGTCAAACTTCGAC+AGG | + | chr1.2:16644288-16644307 | MS.gene83091:intron | 40.0% | |
| AACTTTGACGCTTGGAATAC+CGG | - | chr1.2:16646292-16646311 | None:intergenic | 40.0% | |
| AAGAAAAATTCAGCTGGCTG+GGG | - | chr1.2:16643790-16643809 | None:intergenic | 40.0% | |
| AAGTTTGTATGGGAAACAGC+TGG | + | chr1.2:16642752-16642771 | MS.gene83091:CDS | 40.0% | |
| AATAGGGATGGAAATGAGTC+GGG | + | chr1.2:16644235-16644254 | MS.gene83091:intron | 40.0% | |
| AATCACTCTAGGTTCCCTTT+CGG | - | chr1.2:16642009-16642028 | None:intergenic | 40.0% | |
| ACTCCAGTTTCAACATGGAT+TGG | - | chr1.2:16643709-16643728 | None:intergenic | 40.0% | |
| ACTTGAGTCAAACTTCGACA+GGG | + | chr1.2:16644289-16644308 | MS.gene83091:intron | 40.0% | |
| AGCATTTGTGCAAATGCTAG+GGG | + | chr1.2:16645989-16646008 | MS.gene83091:intron | 40.0% | |
| AGGTTACGCAGCATCATATA+TGG | + | chr1.2:16642108-16642127 | MS.gene83091:CDS | 40.0% | |
| ATCCACGTTTGCAAGCAATT+GGG | - | chr1.2:16641790-16641809 | None:intergenic | 40.0% | |
| ATCTGTGGTATAACCAAACG+AGG | + | chr1.2:16646581-16646600 | MS.gene83091:CDS | 40.0% | |
| ATGAAGACTTTCCCTTTGTC+AGG | - | chr1.2:16644086-16644105 | None:intergenic | 40.0% | |
| ATGACCTTAGGCAAATGGTT+CGG | + | chr1.2:16643839-16643858 | MS.gene83091:intron | 40.0% | |
| ATTAAAGTCGCATGTGGCTA+AGG | + | chr1.2:16642403-16642422 | MS.gene83091:CDS | 40.0% | |
| ATTGAAGTAGATCTGTGTGG+TGG | + | chr1.2:16642608-16642627 | MS.gene83091:CDS | 40.0% | |
| CAAGAACATCTTCCCATTTC+TGG | - | chr1.2:16642340-16642359 | None:intergenic | 40.0% | |
| CCAAGAAAAAGTAAGTGGGA+TGG | - | chr1.2:16643482-16643501 | None:intergenic | 40.0% | |
| CGTAAACATCTTGTGAAGAG+TGG | - | chr1.2:16641722-16641741 | None:intergenic | 40.0% | |
| CTCATTTGTGATTCCTCTTC+AGG | - | chr1.2:16646524-16646543 | None:intergenic | 40.0% | |
| GAATAGGGATGGAAATGAGT+CGG | + | chr1.2:16644234-16644253 | MS.gene83091:intron | 40.0% | |
| GAATATGCAACCTCAAAAGC+AGG | - | chr1.2:16644137-16644156 | None:intergenic | 40.0% | |
| GCCAACCAAGAAAAAGTAAG+TGG | - | chr1.2:16643487-16643506 | None:intergenic | 40.0% | |
| GGTTCGGCAAGAGTAAAAAT+TGG | + | chr1.2:16643855-16643874 | MS.gene83091:CDS | 40.0% | |
| GTAAGCACGATCTTCACATT+AGG | - | chr1.2:16645078-16645097 | None:intergenic | 40.0% | |
| GTCAGTGAATCAATCACTCT+AGG | - | chr1.2:16642020-16642039 | None:intergenic | 40.0% | |
| TAGAGAAGACCACAAGATTC+GGG | - | chr1.2:16645766-16645785 | None:intergenic | 40.0% | |
| TATCCACGTTTGCAAGCAAT+TGG | - | chr1.2:16641791-16641810 | None:intergenic | 40.0% | |
| TCTCGACACATAATCACCAT+CGG | - | chr1.2:16643242-16643261 | None:intergenic | 40.0% | |
| TCTCTTGTCCGAGTGTTTAT+CGG | + | chr1.2:16641894-16641913 | MS.gene83091:CDS | 40.0% | |
| TGAAACTGGAGTTATTCCTC+AGG | + | chr1.2:16643717-16643736 | MS.gene83091:CDS | 40.0% | |
| TGAATAAGCAACCAGATGAG+TGG | - | chr1.2:16642550-16642569 | None:intergenic | 40.0% | |
| TGGTATTGCAATGCTATCAC+TGG | - | chr1.2:16642887-16642906 | None:intergenic | 40.0% | |
| TTGAAGTAGATCTGTGTGGT+GGG | + | chr1.2:16642609-16642628 | MS.gene83091:CDS | 40.0% | |
| TTGAAGTTACCCGAATCTTG+TGG | + | chr1.2:16645754-16645773 | MS.gene83091:intron | 40.0% | |
| TTTCTGCAGTTTGACACATC+TGG | + | chr1.2:16646366-16646385 | MS.gene83091:CDS | 40.0% | |
| ! | AACATGTGCTGTTGTAGGAA+TGG | + | chr1.2:16643594-16643613 | MS.gene83091:intron | 40.0% |
| ! | ACCATATGTTAGGGCTTTTC+CGG | - | chr1.2:16646236-16646255 | None:intergenic | 40.0% |
| ! | AGCAGGTTTTGCTTGTCTAT+GGG | + | chr1.2:16642653-16642672 | MS.gene83091:CDS | 40.0% |
| ! | AGTCATCAAAGCATTACCTG+AGG | - | chr1.2:16643736-16643755 | None:intergenic | 40.0% |
| ! | CAGGTAATGCTTTGATGACT+TGG | + | chr1.2:16643736-16643755 | MS.gene83091:intron | 40.0% |
| ! | CTCTAAACATGTGCTGTTGT+AGG | + | chr1.2:16643589-16643608 | MS.gene83091:intron | 40.0% |
| ! | CTTCATCCATGATGATGAGT+CGG | - | chr1.2:16642282-16642301 | None:intergenic | 40.0% |
| ! | GAGAACACAGCTGTTATTTG+TGG | - | chr1.2:16644860-16644879 | None:intergenic | 40.0% |
| ! | GGACAAAATGAGACGTGTTT+TGG | + | chr1.2:16641932-16641951 | MS.gene83091:CDS | 40.0% |
| ! | TACTGGAAGTCTAGAATCGA+AGG | - | chr1.2:16644499-16644518 | None:intergenic | 40.0% |
| ! | TAGCAGGTTTTGCTTGTCTA+TGG | + | chr1.2:16642652-16642671 | MS.gene83091:CDS | 40.0% |
| ! | TATATTGGCTACACAAGTGC+AGG | + | chr1.2:16644031-16644050 | MS.gene83091:intron | 40.0% |
| ! | TGTTTCTCCCCTGATTTTAG+AGG | + | chr1.2:16643008-16643027 | MS.gene83091:intron | 40.0% |
| ! | TTGATGTTTCTGCTCAACAG+AGG | + | chr1.2:16642057-16642076 | MS.gene83091:CDS | 40.0% |
| !! | CCCTGATTTTAGAGGAAACT+AGG | + | chr1.2:16643016-16643035 | MS.gene83091:intron | 40.0% |
| !! | CTCAAACGAAGGTACTACAT+TGG | + | chr1.2:16642196-16642215 | MS.gene83091:CDS | 40.0% |
| !! | GGAAATTTGTTAGACGCTCT+AGG | + | chr1.2:16645268-16645287 | MS.gene83091:CDS | 40.0% |
| !! | GTGTGGTGCCATATTTGAAA+GGG | - | chr1.2:16644745-16644764 | None:intergenic | 40.0% |
| !! | TCCTGAATTTGAGTTGCCAT+TGG | - | chr1.2:16642952-16642971 | None:intergenic | 40.0% |
| !! | TGGCCACGTTTTGATAATAC+TGG | - | chr1.2:16644366-16644385 | None:intergenic | 40.0% |
| !!! | CCATCCCACTTACTTTTTCT+TGG | + | chr1.2:16643479-16643498 | MS.gene83091:intron | 40.0% |
| !!! | CCCACTTACTTTTTCTTGGT+TGG | + | chr1.2:16643483-16643502 | MS.gene83091:intron | 40.0% |
| AAAATGGAAGGCGATGGAGA+GGG | - | chr1.2:16644638-16644657 | None:intergenic | 45.0% | |
| AAGCCACCCTATACATGCTA+TGG | + | chr1.2:16644422-16644441 | MS.gene83091:intron | 45.0% | |
| AAGCCTATGAAGCACGGATA+CGG | - | chr1.2:16645514-16645533 | None:intergenic | 45.0% | |
| AAGGTTGAGGTCATGAAGGA+GGG | + | chr1.2:16642422-16642441 | MS.gene83091:CDS | 45.0% | |
| ACCCTATACATGCTATGGTG+CGG | + | chr1.2:16644427-16644446 | MS.gene83091:intron | 45.0% | |
| ACCGCACCATAGCATGTATA+GGG | - | chr1.2:16644431-16644450 | None:intergenic | 45.0% | |
| ACCGGAAAAGCCCTAACATA+TGG | + | chr1.2:16646232-16646251 | MS.gene83091:intron | 45.0% | |
| ACGCAGCATCATATATGGAC+TGG | + | chr1.2:16642113-16642132 | MS.gene83091:CDS | 45.0% | |
| ACGTAGACCCGATAAACACT+CGG | - | chr1.2:16641905-16641924 | None:intergenic | 45.0% | |
| ACTTCTCTAGTTGTCGTCGA+AGG | + | chr1.2:16645196-16645215 | MS.gene83091:CDS | 45.0% | |
| AGAAGTTGACGTAAGTGACG+AGG | + | chr1.2:16646341-16646360 | MS.gene83091:CDS | 45.0% | |
| AGCTCAATGCAACCTGACAA+AGG | + | chr1.2:16644071-16644090 | MS.gene83091:CDS | 45.0% | |
| ATATGATGCTGCGTAACCTG+TGG | - | chr1.2:16642107-16642126 | None:intergenic | 45.0% | |
| CAGATAGTGAGAGGATGGTT+GGG | + | chr1.2:16642690-16642709 | MS.gene83091:CDS | 45.0% | |
| CGACCAATCCATGTTGAAAC+TGG | + | chr1.2:16643703-16643722 | MS.gene83091:CDS | 45.0% | |
| CTCTTGTCCGAGTGTTTATC+GGG | + | chr1.2:16641895-16641914 | MS.gene83091:CDS | 45.0% | |
| GACTAATCAGCTGAGGAGTT+CGG | - | chr1.2:16644567-16644586 | None:intergenic | 45.0% | |
| GACTTCAGATAGTGAGAGGA+TGG | + | chr1.2:16642685-16642704 | MS.gene83091:CDS | 45.0% | |
| GCAACAACGCCAAAGAAGTT+TGG | - | chr1.2:16644604-16644623 | None:intergenic | 45.0% | |
| GCACAGACACTCCTTAGATT+AGG | + | chr1.2:16645350-16645369 | MS.gene83091:intron | 45.0% | |
| GCATTTGTGCAAATGCTAGG+GGG | + | chr1.2:16645990-16646009 | MS.gene83091:intron | 45.0% | |
| GCCAATGGCAACTCAAATTC+AGG | + | chr1.2:16642948-16642967 | MS.gene83091:intron | 45.0% | |
| GCTCAATGCAACCTGACAAA+GGG | + | chr1.2:16644072-16644091 | MS.gene83091:CDS | 45.0% | |
| GCTCTTCAACGATGTCTCTT+GGG | + | chr1.2:16645023-16645042 | MS.gene83091:CDS | 45.0% | |
| GGGAAACAGCTGGAATGAAA+GGG | + | chr1.2:16642762-16642781 | MS.gene83091:CDS | 45.0% | |
| GTACCATCATTGCACTAGCA+TGG | - | chr1.2:16644386-16644405 | None:intergenic | 45.0% | |
| GTATTACGGTCTATGGCAGA+TGG | - | chr1.2:16644795-16644814 | None:intergenic | 45.0% | |
| GTGTGTTGGAGCAGACAATA+GGG | + | chr1.2:16642811-16642830 | MS.gene83091:CDS | 45.0% | |
| TAAAATGGAAGGCGATGGAG+AGG | - | chr1.2:16644639-16644658 | None:intergenic | 45.0% | |
| TAAGGTTGAGGTCATGAAGG+AGG | + | chr1.2:16642421-16642440 | MS.gene83091:CDS | 45.0% | |
| TATCGGGTCTACGTTTGTTC+AGG | + | chr1.2:16641911-16641930 | MS.gene83091:CDS | 45.0% | |
| TATCGGTAACTCTCCCATAG+AGG | - | chr1.2:16642589-16642608 | None:intergenic | 45.0% | |
| TATGATGCTGCGTAACCTGT+GGG | - | chr1.2:16642106-16642125 | None:intergenic | 45.0% | |
| TCAGATAGTGAGAGGATGGT+TGG | + | chr1.2:16642689-16642708 | MS.gene83091:CDS | 45.0% | |
| TCAGCAGTAACTTTGACGCT+TGG | - | chr1.2:16646300-16646319 | None:intergenic | 45.0% | |
| TCGTCACTTACGTCAACTTC+TGG | - | chr1.2:16646342-16646361 | None:intergenic | 45.0% | |
| TGAAGGTGACTAATCAGCTG+AGG | - | chr1.2:16644574-16644593 | None:intergenic | 45.0% | |
| TGCCATAAAATGGAAGGCGA+TGG | - | chr1.2:16644644-16644663 | None:intergenic | 45.0% | |
| TGCTCTTCAACGATGTCTCT+TGG | + | chr1.2:16645022-16645041 | MS.gene83091:CDS | 45.0% | |
| TGGGAAACAGCTGGAATGAA+AGG | + | chr1.2:16642761-16642780 | MS.gene83091:CDS | 45.0% | |
| TGTCTCTTGGGTGCTAAAAG+TGG | + | chr1.2:16645035-16645054 | MS.gene83091:CDS | 45.0% | |
| TGTGGTATAACCAAACGAGG+AGG | + | chr1.2:16646584-16646603 | MS.gene83091:CDS | 45.0% | |
| TTGAAAGCTTCTTCTGCACC+AGG | - | chr1.2:16642517-16642536 | None:intergenic | 45.0% | |
| ! | AAGAGTAATAGGCTGGCTAC+TGG | - | chr1.2:16644516-16644535 | None:intergenic | 45.0% |
| ! | ACAGAGAGCTGCAGTCTTTT+TGG | - | chr1.2:16641682-16641701 | None:intergenic | 45.0% |
| ! | ATGTGCTGTTGTAGGAATGG+TGG | + | chr1.2:16643597-16643616 | MS.gene83091:intron | 45.0% |
| ! | CAGCTGTTATTTGTGGCAGA+AGG | - | chr1.2:16644853-16644872 | None:intergenic | 45.0% |
| ! | CCTGTGGGCATACTTTGAAA+CGG | - | chr1.2:16642091-16642110 | None:intergenic | 45.0% |
| ! | CTCCATCGCCTTCCATTTTA+TGG | + | chr1.2:16644639-16644658 | MS.gene83091:intron | 45.0% |
| ! | GGAGGGACTTTTACACATCA+AGG | + | chr1.2:16642439-16642458 | MS.gene83091:CDS | 45.0% |
| ! | TAGGCTGCTTTGAGCAATAC+CGG | + | chr1.2:16646270-16646289 | MS.gene83091:intron | 45.0% |
| ! | TCTCTATTTGCTAGGTTGGG+AGG | + | chr1.2:16646477-16646496 | MS.gene83091:intron | 45.0% |
| ! | TGATGACTTGGCACTTGCAA+GGG | + | chr1.2:16643748-16643767 | MS.gene83091:intron | 45.0% |
| ! | TGTGCTGTTGTAGGAATGGT+GGG | + | chr1.2:16643598-16643617 | MS.gene83091:intron | 45.0% |
| ! | TGTTAGGGCTTTTCCGGTTA+AGG | - | chr1.2:16646230-16646249 | None:intergenic | 45.0% |
| ! | TGTTTCTGCTCAACAGAGGA+AGG | + | chr1.2:16642061-16642080 | MS.gene83091:CDS | 45.0% |
| ! | TTATCAGTCAGTGGTGCCAA+TGG | + | chr1.2:16642933-16642952 | MS.gene83091:intron | 45.0% |
| ! | TTGATGACTTGGCACTTGCA+AGG | + | chr1.2:16643747-16643766 | MS.gene83091:intron | 45.0% |
| ! | TTGTCAGGTTGCATTGAGCT+TGG | - | chr1.2:16644071-16644090 | None:intergenic | 45.0% |
| !! | AAAGGGCATTTGGACTTACG+AGG | + | chr1.2:16642779-16642798 | MS.gene83091:CDS | 45.0% |
| !! | AGCTGGAATGAAAGGGCATT+TGG | + | chr1.2:16642769-16642788 | MS.gene83091:CDS | 45.0% |
| !! | ATTCGGGAGCTGTTTTACAG+TGG | + | chr1.2:16641642-16641661 | MS.gene83091:CDS | 45.0% |
| !! | GGAATGGTGGGTTTATCTCT+AGG | + | chr1.2:16643610-16643629 | MS.gene83091:intron | 45.0% |
| !! | GGACTTGTTGTCAGTTCAGA+TGG | + | chr1.2:16645247-16645266 | MS.gene83091:CDS | 45.0% |
| !! | GGTGTGGTGCCATATTTGAA+AGG | - | chr1.2:16644746-16644765 | None:intergenic | 45.0% |
| AAAACACTGGGCCACTCATC+TGG | + | chr1.2:16642536-16642555 | MS.gene83091:CDS | 50.0% | |
| AAGCAGTTGGATCGAGCACT+TGG | + | chr1.2:16642722-16642741 | MS.gene83091:CDS | 50.0% | |
| ACACAAGTGCAGGCTGAACT+TGG | + | chr1.2:16644041-16644060 | MS.gene83091:intron | 50.0% | |
| AGAGGTCATTGCCAGTGTGA+AGG | + | chr1.2:16643884-16643903 | MS.gene83091:CDS | 50.0% | |
| AGCACCTGGCAGGGAAAAAA+GGG | - | chr1.2:16645164-16645183 | None:intergenic | 50.0% | |
| AGCAGTTGGATCGAGCACTT+GGG | + | chr1.2:16642723-16642742 | MS.gene83091:CDS | 50.0% | |
| ATCAATTCCAGCACCTGGCA+GGG | - | chr1.2:16645173-16645192 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | chr1.2:16645508-16645527 | None:intergenic | 50.0% | |
| CACCGCACCATAGCATGTAT+AGG | - | chr1.2:16644432-16644451 | None:intergenic | 50.0% | |
| CATTCAAGGTGGCATTGCTC+AGG | + | chr1.2:16643645-16643664 | MS.gene83091:CDS | 50.0% | |
| CCGTTTCAAAGTATGCCCAC+AGG | + | chr1.2:16642088-16642107 | MS.gene83091:CDS | 50.0% | |
| CTGCTCCAACACACCACAAA+TGG | - | chr1.2:16642805-16642824 | None:intergenic | 50.0% | |
| CTTGCCGAACCATTTGCCTA+AGG | - | chr1.2:16643846-16643865 | None:intergenic | 50.0% | |
| GACCCAATTGCTTGCAAACG+TGG | + | chr1.2:16641785-16641804 | MS.gene83091:CDS | 50.0% | |
| GCAATGCTATCACTGGTCAC+AGG | - | chr1.2:16642880-16642899 | None:intergenic | 50.0% | |
| GCACCATAGCATGTATAGGG+TGG | - | chr1.2:16644428-16644447 | None:intergenic | 50.0% | |
| GGCTAAGGTTGAGGTCATGA+AGG | + | chr1.2:16642418-16642437 | MS.gene83091:CDS | 50.0% | |
| GGTGTGTTGGAGCAGACAAT+AGG | + | chr1.2:16642810-16642829 | MS.gene83091:CDS | 50.0% | |
| GTGTGATCAATTCCAGCACC+TGG | - | chr1.2:16645178-16645197 | None:intergenic | 50.0% | |
| TACGGTCTATGGCAGATGGA+TGG | - | chr1.2:16644791-16644810 | None:intergenic | 50.0% | |
| TCCTTAGATTAGGCGTGTCG+CGG | + | chr1.2:16645360-16645379 | MS.gene83091:intron | 50.0% | |
| TGAGTCGGCGTCAGAAAAAC+TGG | - | chr1.2:16642267-16642286 | None:intergenic | 50.0% | |
| TGGACTTACGAGGCCATTTG+TGG | + | chr1.2:16642789-16642808 | MS.gene83091:CDS | 50.0% | |
| TGGCCATGCTAGTGCAATGA+TGG | + | chr1.2:16644380-16644399 | MS.gene83091:intron | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | + | chr1.2:16645508-16645527 | MS.gene83091:intron | 50.0% | |
| TTCTGCTCAACAGAGGAAGG+TGG | + | chr1.2:16642064-16642083 | MS.gene83091:CDS | 50.0% | |
| TTGGGTGCTAAAAGTGGAGC+AGG | + | chr1.2:16645041-16645060 | MS.gene83091:CDS | 50.0% | |
| TTGTGATTCCTCTTCAGGCG+TGG | - | chr1.2:16646519-16646538 | None:intergenic | 50.0% | |
| TTGTGGCAGAAGGCTGTTCA+TGG | - | chr1.2:16644843-16644862 | None:intergenic | 50.0% | |
| ! | AACAGGAAAGGGCACATCTG+TGG | + | chr1.2:16646566-16646585 | MS.gene83091:CDS | 50.0% |
| ! | ATAACCAAACGAGGAGGTGC+AGG | + | chr1.2:16646590-16646609 | MS.gene83091:CDS | 50.0% |
| ! | GCTTCTTCGTGTTGCTACCA+GGG | + | chr1.2:16643412-16643431 | MS.gene83091:intron | 50.0% |
| ! | TAACCAAACGAGGAGGTGCA+GGG | + | chr1.2:16646591-16646610 | MS.gene83091:CDS | 50.0% |
| ! | TGCTTCTTCGTGTTGCTACC+AGG | + | chr1.2:16643411-16643430 | MS.gene83091:intron | 50.0% |
| !! | GAATCGAAGGCTGTTTTCGC+TGG | - | chr1.2:16644486-16644505 | None:intergenic | 50.0% |
| !! | GGTTGGGAGGCACTATATTG+TGG | + | chr1.2:16646490-16646509 | MS.gene83091:intron | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr1.2:16645411-16645430 | None:intergenic | 50.0% |
| ACCGCGACACGCCTAATCTA+AGG | - | chr1.2:16645364-16645383 | None:intergenic | 55.0% | |
| CAGCACCTGGCAGGGAAAAA+AGG | - | chr1.2:16645165-16645184 | None:intergenic | 55.0% | |
| CGAGGCCATTTGTGGTGTGT+TGG | + | chr1.2:16642797-16642816 | MS.gene83091:CDS | 55.0% | |
| CTGGCAGGGAAAAAAGGGCA+TGG | - | chr1.2:16645159-16645178 | None:intergenic | 55.0% | |
| GAGTCGGGCTGAGTCAAACT+TGG | + | chr1.2:16644250-16644269 | MS.gene83091:intron | 55.0% | |
| GATCAATTCCAGCACCTGGC+AGG | - | chr1.2:16645174-16645193 | None:intergenic | 55.0% | |
| GCTCAGGATCTTCGCTGTGA+TGG | + | chr1.2:16643661-16643680 | MS.gene83091:CDS | 55.0% | |
| GCTTCTCAGGGCTCAAACGA+AGG | + | chr1.2:16642185-16642204 | MS.gene83091:CDS | 55.0% | |
| GGACTGACAGGTGACACCTA+TGG | + | chr1.2:16643433-16643452 | MS.gene83091:CDS | 55.0% | |
| GTCGCATGTGGCTAAGGTTG+AGG | + | chr1.2:16642409-16642428 | MS.gene83091:CDS | 55.0% | |
| TGTTGCTACCAGGGACTGAC+AGG | + | chr1.2:16643421-16643440 | MS.gene83091:intron | 55.0% | |
| !! | CGCTGGTGGTGTCATGAGAA+TGG | - | chr1.2:16644469-16644488 | None:intergenic | 55.0% |
| !! | CTGACGCCGACTCATCATCA+TGG | + | chr1.2:16642273-16642292 | MS.gene83091:CDS | 55.0% |
| !! | GACTGCAGAGCCTGCTTTTG+AGG | + | chr1.2:16644124-16644143 | MS.gene83091:CDS | 55.0% |
| !! | TCGAAGGCTGTTTTCGCTGG+TGG | - | chr1.2:16644483-16644502 | None:intergenic | 55.0% |
| !!! | CATGCCCTTTTTTCCCTGCC+AGG | + | chr1.2:16645157-16645176 | MS.gene83091:intron | 55.0% |
| !!! | CTTTTTTCCCTGCCAGGTGC+TGG | + | chr1.2:16645163-16645182 | MS.gene83091:intron | 55.0% |
| AAGGCGATGGAGAGGGTCAC+TGG | - | chr1.2:16644631-16644650 | None:intergenic | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | - | chr1.2:16645501-16645520 | None:intergenic | 60.0% | |
| AGTGAGAGGATGGTTGGGCG+TGG | + | chr1.2:16642695-16642714 | MS.gene83091:CDS | 60.0% | |
| CAACCCTGCACCTCCTCGTT+TGG | - | chr1.2:16646597-16646616 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCGCGGTGT+CGG | + | chr1.2:16645366-16645385 | MS.gene83091:intron | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr1.2:16645479-16645498 | MS.gene83091:intron | 60.0% | |
| TGGGCGTGGTGTGAAGCAGT+TGG | + | chr1.2:16642709-16642728 | MS.gene83091:CDS | 60.0% | |
| TGTGGATGCCACGCCTGAAG+AGG | + | chr1.2:16646508-16646527 | MS.gene83091:CDS | 60.0% | |
| ! | AGGTGTCACCTGTCAGTCCC+TGG | - | chr1.2:16643432-16643451 | None:intergenic | 60.0% |
| ! | CAAACGAGGAGGTGCAGGGT+TGG | + | chr1.2:16646595-16646614 | MS.gene83091:CDS | 60.0% |
| ! | CGCTCTAGGTGCTGCCATCA+AGG | + | chr1.2:16645282-16645301 | MS.gene83091:CDS | 60.0% |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | - | chr1.2:16645405-16645424 | None:intergenic | 60.0% |
| CACGGACACCGGACACGACA+CGG | - | chr1.2:16645490-16645509 | None:intergenic | 65.0% | |
| TATGGTGCGGTGCGCAGTGG+TGG | + | chr1.2:16644440-16644459 | MS.gene83091:intron | 65.0% | |
| TGCTATGGTGCGGTGCGCAG+TGG | + | chr1.2:16644437-16644456 | MS.gene83091:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 16641630 | 16646727 | 16641630 | ID=MS.gene83091 |
| chr1.2 | mRNA | 16641630 | 16646727 | 16641630 | ID=MS.gene83091.t1;Parent=MS.gene83091 |
| chr1.2 | exon | 16641630 | 16642832 | 16641630 | ID=MS.gene83091.t1.exon1;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16641630 | 16642832 | 16641630 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16643433 | 16643469 | 16643433 | ID=MS.gene83091.t1.exon2;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16643433 | 16643469 | 16643433 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16643611 | 16643738 | 16643611 | ID=MS.gene83091.t1.exon3;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16643611 | 16643738 | 16643611 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16643849 | 16643905 | 16643849 | ID=MS.gene83091.t1.exon4;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16643849 | 16643905 | 16643849 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16644053 | 16644145 | 16644053 | ID=MS.gene83091.t1.exon5;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16644053 | 16644145 | 16644053 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16644984 | 16645062 | 16644984 | ID=MS.gene83091.t1.exon6;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16644984 | 16645062 | 16644984 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16645179 | 16645303 | 16645179 | ID=MS.gene83091.t1.exon7;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16645179 | 16645303 | 16645179 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16646273 | 16646416 | 16646273 | ID=MS.gene83091.t1.exon8;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16646273 | 16646416 | 16646273 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| chr1.2 | exon | 16646491 | 16646727 | 16646491 | ID=MS.gene83091.t1.exon9;Parent=MS.gene83091.t1 |
| chr1.2 | CDS | 16646491 | 16646727 | 16646491 | ID=cds.MS.gene83091.t1;Parent=MS.gene83091.t1 |
| Gene Sequence |
| Protein sequence |
