Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63988.t1 | XP_013466165.1 | 96.5 | 550 | 19 | 0 | 1 | 550 | 1 | 550 | 3.60E-258 | 900.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63988.t1 | Q8RXK2 | 47.2 | 475 | 232 | 6 | 1 | 464 | 1 | 467 | 3.7e-110 | 400.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63988.t1 | A0A072VF22 | 96.5 | 550 | 19 | 0 | 1 | 550 | 1 | 550 | 2.6e-258 | 900.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene63988 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene049207 | MS.gene63988 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene63988 | 0.861525 | 9.65E-64 | -1.69E-46 |
| MS.gene049283 | MS.gene63988 | 0.823365 | 1.44E-53 | -1.69E-46 |
| MS.gene049343 | MS.gene63988 | 0.820541 | 6.49E-53 | -1.69E-46 |
| MS.gene049441 | MS.gene63988 | 0.816272 | 6.03E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene63988 | 0.834305 | 3.24E-56 | -1.69E-46 |
| MS.gene049711 | MS.gene63988 | 0.81627 | 6.03E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene63988 | 0.873242 | 1.71E-67 | -1.69E-46 |
| MS.gene049825 | MS.gene63988 | 0.865394 | 6.10E-65 | -1.69E-46 |
| MS.gene049873 | MS.gene63988 | 0.84849 | 5.93E-60 | -1.69E-46 |
| MS.gene050026 | MS.gene63988 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene050355 | MS.gene63988 | 0.817191 | 3.75E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene63988 | 0.852961 | 3.27E-61 | -1.69E-46 |
| MS.gene050561 | MS.gene63988 | 0.84865 | 5.35E-60 | -1.69E-46 |
| MS.gene050562 | MS.gene63988 | 0.842399 | 2.65E-58 | -1.69E-46 |
| MS.gene050828 | MS.gene63988 | 0.809389 | 1.94E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene63988 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene63988 | 0.81569 | 8.12E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene63988 | 0.822906 | 1.84E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene63988 | 0.849115 | 3.98E-60 | -1.69E-46 |
| MS.gene051332 | MS.gene63988 | 0.829217 | 5.83E-55 | -1.69E-46 |
| MS.gene051574 | MS.gene63988 | 0.844069 | 9.50E-59 | -1.69E-46 |
| MS.gene051597 | MS.gene63988 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene63988 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene051700 | MS.gene63988 | 0.843003 | 1.83E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene63988 | 0.874821 | 5.00E-68 | -1.69E-46 |
| MS.gene051832 | MS.gene63988 | 0.827306 | 1.68E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene63988 | 0.822445 | 2.36E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene63988 | 0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene052037 | MS.gene63988 | 0.809869 | 1.53E-50 | -1.69E-46 |
| MS.gene052108 | MS.gene63988 | 0.801776 | 7.68E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene63988 | -0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene63988 | 0.826178 | 3.13E-54 | -1.69E-46 |
| MS.gene052534 | MS.gene63988 | 0.805742 | 1.15E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene63988 | 0.881761 | 1.83E-70 | -1.69E-46 |
| MS.gene052584 | MS.gene63988 | 0.893774 | 4.59E-75 | -1.69E-46 |
| MS.gene052586 | MS.gene63988 | 0.809558 | 1.78E-50 | -1.69E-46 |
| MS.gene052717 | MS.gene63988 | 0.853158 | 2.88E-61 | -1.69E-46 |
| MS.gene052867 | MS.gene63988 | 0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene63988 | 0.819019 | 1.45E-52 | -1.69E-46 |
| MS.gene05308 | MS.gene63988 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene63988 | 0.828327 | 9.56E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene63988 | 0.883908 | 3.01E-71 | -1.69E-46 |
| MS.gene053321 | MS.gene63988 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene63988 | 0.828171 | 1.04E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene63988 | 0.819113 | 1.38E-52 | -1.69E-46 |
| MS.gene053995 | MS.gene63988 | 0.835718 | 1.43E-56 | -1.69E-46 |
| MS.gene054222 | MS.gene63988 | 0.812505 | 4.10E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene63988 | 0.800435 | 1.44E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene63988 | 0.845778 | 3.28E-59 | -1.69E-46 |
| MS.gene05458 | MS.gene63988 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene63988 | 0.841311 | 5.13E-58 | -1.69E-46 |
| MS.gene054775 | MS.gene63988 | 0.808653 | 2.79E-50 | -1.69E-46 |
| MS.gene054967 | MS.gene63988 | 0.828477 | 8.80E-55 | -1.69E-46 |
| MS.gene055166 | MS.gene63988 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene055222 | MS.gene63988 | 0.801574 | 8.44E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene63988 | 0.828962 | 6.72E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene63988 | 0.828453 | 8.92E-55 | -1.69E-46 |
| MS.gene055589 | MS.gene63988 | 0.832117 | 1.13E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene63988 | 0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene63988 | 0.827597 | 1.43E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene63988 | 0.861868 | 7.58E-64 | -1.69E-46 |
| MS.gene055841 | MS.gene63988 | 0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene63988 | 0.85272 | 3.83E-61 | -1.69E-46 |
| MS.gene056091 | MS.gene63988 | 0.845269 | 4.51E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene63988 | 0.803963 | 2.71E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene63988 | 0.811249 | 7.70E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene63988 | 0.835073 | 2.07E-56 | -1.69E-46 |
| MS.gene056403 | MS.gene63988 | 0.856646 | 2.80E-62 | -1.69E-46 |
| MS.gene05659 | MS.gene63988 | 0.832348 | 9.95E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene63988 | 0.852298 | 5.06E-61 | -1.69E-46 |
| MS.gene056699 | MS.gene63988 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene63988 | 0.821075 | 4.90E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene63988 | 0.829646 | 4.58E-55 | -1.69E-46 |
| MS.gene05689 | MS.gene63988 | 0.850789 | 1.35E-60 | -1.69E-46 |
| MS.gene05690 | MS.gene63988 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene63988 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene63988 | 0.835378 | 1.74E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene63988 | 0.830557 | 2.75E-55 | -1.69E-46 |
| MS.gene057314 | MS.gene63988 | 0.84219 | 3.01E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene63988 | 0.824165 | 9.36E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene63988 | 0.832455 | 9.36E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene63988 | 0.829009 | 6.54E-55 | -1.69E-46 |
| MS.gene058668 | MS.gene63988 | 0.826253 | 3.00E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene63988 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene05950 | MS.gene63988 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene05953 | MS.gene63988 | 0.837164 | 6.11E-57 | -1.69E-46 |
| MS.gene05954 | MS.gene63988 | 0.875092 | 4.05E-68 | -1.69E-46 |
| MS.gene059625 | MS.gene63988 | 0.848754 | 5.01E-60 | -1.69E-46 |
| MS.gene059774 | MS.gene63988 | 0.802177 | 6.35E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene63988 | -0.83201 | 1.21E-55 | -1.69E-46 |
| MS.gene059901 | MS.gene63988 | -0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene63988 | 0.868324 | 7.10E-66 | -1.69E-46 |
| MS.gene060258 | MS.gene63988 | 0.803022 | 4.25E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene63988 | 0.850385 | 1.76E-60 | -1.69E-46 |
| MS.gene060429 | MS.gene63988 | 0.829935 | 3.90E-55 | -1.69E-46 |
| MS.gene060521 | MS.gene63988 | 0.836775 | 7.68E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene63988 | 0.803341 | 3.65E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene63988 | 0.826746 | 2.29E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene63988 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene63988 | 0.815275 | 1.00E-51 | -1.69E-46 |
| MS.gene061160 | MS.gene63988 | 0.800782 | 1.23E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63988.t1 | MTR_1g023955 | 97.273 | 550 | 15 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1098 |
| MS.gene63988.t1 | MTR_1g423960 | 96.000 | 100 | 4 | 0 | 1 | 100 | 1 | 100 | 2.95e-63 | 202 |
| MS.gene63988.t1 | MTR_1g029410 | 45.283 | 159 | 85 | 2 | 142 | 300 | 255 | 411 | 2.76e-32 | 129 |
| MS.gene63988.t1 | MTR_1g029410 | 45.283 | 159 | 85 | 2 | 142 | 300 | 218 | 374 | 1.26e-31 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63988.t1 | AT5G67240 | 50.351 | 427 | 197 | 6 | 1 | 415 | 1 | 424 | 3.32e-142 | 420 |
| MS.gene63988.t1 | AT5G67240 | 50.351 | 427 | 197 | 6 | 1 | 415 | 1 | 424 | 4.08e-141 | 422 |
| MS.gene63988.t1 | AT5G67240 | 31.875 | 160 | 103 | 3 | 316 | 471 | 465 | 622 | 6.36e-16 | 81.6 |
| MS.gene63988.t1 | AT5G67240 | 50.351 | 427 | 197 | 6 | 1 | 415 | 1 | 424 | 1.42e-140 | 421 |
| MS.gene63988.t1 | AT5G67240 | 45.000 | 100 | 54 | 1 | 316 | 415 | 465 | 563 | 1.00e-18 | 90.1 |
| MS.gene63988.t1 | AT5G67240 | 50.585 | 427 | 196 | 6 | 1 | 415 | 1 | 424 | 1.61e-139 | 422 |
| MS.gene63988.t1 | AT5G67240 | 45.000 | 100 | 54 | 1 | 316 | 415 | 465 | 563 | 1.00e-18 | 90.5 |
| MS.gene63988.t1 | AT5G67240 | 31.875 | 160 | 103 | 3 | 316 | 471 | 604 | 761 | 1.20e-15 | 80.9 |
| MS.gene63988.t1 | AT3G50100 | 47.506 | 421 | 203 | 7 | 1 | 415 | 1 | 409 | 1.72e-125 | 374 |
| MS.gene63988.t1 | AT5G05540 | 44.681 | 423 | 221 | 7 | 1 | 415 | 1 | 418 | 2.85e-105 | 324 |
| MS.gene63988.t1 | AT3G50100 | 47.799 | 318 | 155 | 4 | 102 | 415 | 2 | 312 | 5.48e-95 | 292 |
| MS.gene63988.t1 | AT5G05540 | 46.154 | 351 | 177 | 6 | 1 | 344 | 1 | 346 | 2.96e-91 | 284 |
| MS.gene63988.t1 | AT3G50090 | 43.425 | 327 | 157 | 6 | 82 | 400 | 12 | 318 | 8.20e-75 | 240 |
| MS.gene63988.t1 | AT5G25800 | 42.424 | 165 | 93 | 2 | 142 | 306 | 215 | 377 | 4.54e-27 | 115 |
| MS.gene63988.t1 | AT5G25800 | 42.424 | 165 | 93 | 2 | 142 | 306 | 217 | 379 | 4.63e-27 | 115 |
| MS.gene63988.t1 | AT3G15080 | 35.849 | 159 | 87 | 8 | 140 | 292 | 81 | 230 | 7.96e-14 | 72.4 |
| MS.gene63988.t1 | AT5G40310 | 33.140 | 172 | 94 | 7 | 138 | 292 | 131 | 298 | 1.46e-12 | 69.7 |
| MS.gene63988.t1 | AT5G40310 | 33.140 | 172 | 94 | 7 | 138 | 292 | 122 | 289 | 1.54e-12 | 69.7 |
Find 110 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTCCTTGACCGTTTC+TGG | 0.065636 | 1.4:+1061667 | None:intergenic |
| ATCTTTGTAACAGTCTGTTT+TGG | 0.175214 | 1.4:-1062229 | MS.gene63988:intron |
| CAGTTTATTTGTTCGGAAAA+TGG | 0.222363 | 1.4:-1061132 | MS.gene63988:CDS |
| GGCTCTTGAACCAATGTTAA+TGG | 0.248346 | 1.4:+1062099 | None:intergenic |
| GAAAGGCATGAAGGGTAAAA+TGG | 0.250069 | 1.4:-1065570 | MS.gene63988:CDS |
| GGGCTATGAAGTTCGGAAAA+AGG | 0.268806 | 1.4:-1062208 | MS.gene63988:CDS |
| GTTGGTTGATATTGTAAAAT+TGG | 0.270086 | 1.4:-1065600 | MS.gene63988:CDS |
| AAAGAGGTCCCATGAGGTTT+TGG | 0.280323 | 1.4:-1065483 | MS.gene63988:CDS |
| AGTGATAAACCTTAAGAAAA+AGG | 0.280502 | 1.4:-1063297 | MS.gene63988:CDS |
| AATTACTGCTCTGCATAAAA+TGG | 0.290293 | 1.4:-1060751 | MS.gene63988:CDS |
| TAAACTGTGTCCAACTAATA+TGG | 0.306541 | 1.4:+1062786 | None:intergenic |
| TGAACCAATGTTAATGGAAA+TGG | 0.321470 | 1.4:+1062105 | None:intergenic |
| ATTGTATATGTACCTTTGTT+TGG | 0.351180 | 1.4:+1061576 | None:intergenic |
| CTTCACTTTCTTTCAATCGT+TGG | 0.364206 | 1.4:+1060820 | None:intergenic |
| TGTGGTAGATCTTATCCCTT+TGG | 0.364944 | 1.4:+1063274 | None:intergenic |
| GAGAGAACAGTTGAGGAAAA+AGG | 0.366768 | 1.4:-1060928 | MS.gene63988:CDS |
| GTACCTTTGTTTGGCTGCCT+TGG | 0.368463 | 1.4:+1061585 | None:intergenic |
| AGTTTATTTGTTCGGAAAAT+GGG | 0.384251 | 1.4:-1061131 | MS.gene63988:CDS |
| GCACTACACGAAATTGTTCC+TGG | 0.385982 | 1.4:-1061909 | MS.gene63988:CDS |
| TAACAAACCTTATCAATAGA+TGG | 0.392009 | 1.4:+1064437 | None:intergenic |
| TTCGTTGCCATCTATTGATA+AGG | 0.396493 | 1.4:-1064444 | MS.gene63988:intron |
| ATTACACAAACTTGTTAAAC+CGG | 0.400307 | 1.4:-1063009 | MS.gene63988:CDS |
| TACTTTGTGTAGGACTCAAA+TGG | 0.401193 | 1.4:-1061203 | MS.gene63988:intron |
| TCTGGTAAATCTCTCTTAGA+TGG | 0.403312 | 1.4:+1061083 | None:intergenic |
| ACCTCATGGGACCTCTTTGA+TGG | 0.405801 | 1.4:+1065488 | None:intergenic |
| TTCGTTGAATAGTTTGTGTC+AGG | 0.407721 | 1.4:-1062539 | MS.gene63988:intron |
| TCCAATGGAACCATATTAGT+TGG | 0.408073 | 1.4:-1062796 | MS.gene63988:CDS |
| TTATGAAAACATACCTGCTC+AGG | 0.413500 | 1.4:+1065223 | None:intergenic |
| TGTTGTAGATCACAATTTAG+AGG | 0.418558 | 1.4:-1063186 | MS.gene63988:intron |
| GACTACAAAACAGAGATTAC+TGG | 0.429986 | 1.4:-1062972 | MS.gene63988:CDS |
| TGAGTGTCAGTTTATTTGTT+CGG | 0.442329 | 1.4:-1061139 | MS.gene63988:CDS |
| CTCAACAGATGAGGATTTGA+AGG | 0.447979 | 1.4:-1065441 | MS.gene63988:intron |
| TAGGGTGCTGGAGAGTTACT+TGG | 0.466593 | 1.4:+1064483 | None:intergenic |
| TTGCTTCAGCCTTCCAGAAA+CGG | 0.466691 | 1.4:-1061680 | MS.gene63988:intron |
| TGCATACATCTTCCAACCCT+TGG | 0.468589 | 1.4:-1062584 | MS.gene63988:CDS |
| AAAGGCATGAAGGGTAAAAT+GGG | 0.471068 | 1.4:-1065569 | MS.gene63988:CDS |
| TCCAACTAATATGGTTCCAT+TGG | 0.471919 | 1.4:+1062795 | None:intergenic |
| AATGGATCCTGAAGTTGAAA+AGG | 0.473741 | 1.4:-1061021 | MS.gene63988:CDS |
| TGTCACGCGTCGGCTGAGTA+CGG | 0.474017 | 1.4:-1061165 | MS.gene63988:CDS |
| GGTTGCTGTTGATTGTGAAA+TGG | 0.476220 | 1.4:-1063249 | MS.gene63988:CDS |
| TGAAGATGGGACTGAAGCTT+TGG | 0.477204 | 1.4:-1063219 | MS.gene63988:CDS |
| TAGTCTTTGATTGCTTTCTC+CGG | 0.480451 | 1.4:+1062990 | None:intergenic |
| GAATAATCCATTGGATACAT+AGG | 0.485454 | 1.4:+1064464 | None:intergenic |
| AGATTTACCAGAGGGTGAGA+TGG | 0.486224 | 1.4:-1061072 | MS.gene63988:CDS |
| AGTGGATCATGAAATTGAAA+AGG | 0.487238 | 1.4:-1060874 | MS.gene63988:CDS |
| TTGCTCCTTAGCTGATATAC+AGG | 0.488234 | 1.4:-1062919 | MS.gene63988:intron |
| GCTTCAGTGTTCACAGTGGT+TGG | 0.489845 | 1.4:+1061930 | None:intergenic |
| GTAAAATTGGTACAAAAGAA+AGG | 0.490743 | 1.4:-1065587 | MS.gene63988:CDS |
| CGATCTATTGTGAAGTCCCC+AGG | 0.493552 | 1.4:+1061891 | None:intergenic |
| GATTGACACCGCGGAAAAGA+AGG | 0.505994 | 1.4:-1066732 | MS.gene63988:intron |
| CACTACACGAAATTGTTCCT+GGG | 0.507092 | 1.4:-1061908 | MS.gene63988:CDS |
| ATCTCACGATTCCCCTGAGC+AGG | 0.509513 | 1.4:-1065236 | MS.gene63988:intron |
| GGGTAAAATGGGAGACTGGA+AGG | 0.511985 | 1.4:-1065558 | MS.gene63988:CDS |
| ACTTTGTGTAGGACTCAAAT+GGG | 0.515289 | 1.4:-1061202 | MS.gene63988:intron |
| GTCACGCGTCGGCTGAGTAC+GGG | 0.517861 | 1.4:-1061164 | MS.gene63988:CDS |
| ATGAAGAAGTTGTTATCCAA+TGG | 0.538388 | 1.4:-1062811 | MS.gene63988:CDS |
| CCTTGGATGGCTCTATTCAC+AGG | 0.539512 | 1.4:-1062567 | MS.gene63988:CDS |
| TGATTCCAAGGAAGGAAAAG+TGG | 0.539897 | 1.4:-1060892 | MS.gene63988:CDS |
| GAAATGGTTCTCTGTGAAGA+TGG | 0.540693 | 1.4:-1063233 | MS.gene63988:CDS |
| CCATTGGATACATAGGGTGC+TGG | 0.541606 | 1.4:+1064471 | None:intergenic |
| GAAATGCAGCCAAAACCTCA+TGG | 0.548328 | 1.4:+1065474 | None:intergenic |
| GGTACAAAAGAAAGGCATGA+AGG | 0.548788 | 1.4:-1065579 | MS.gene63988:CDS |
| GTGCTTCAATCTCTTTCAAG+TGG | 0.549104 | 1.4:+1060847 | None:intergenic |
| ACATCAACCATCTCACCCTC+TGG | 0.549275 | 1.4:+1061065 | None:intergenic |
| TAAGCCATTTCCATTAACAT+TGG | 0.550774 | 1.4:-1062109 | MS.gene63988:CDS |
| AATAATCCATTGGATACATA+GGG | 0.550785 | 1.4:+1064465 | None:intergenic |
| TCTCCTTGACCGTTTCTGGA+AGG | 0.551707 | 1.4:+1061671 | None:intergenic |
| CAAGTGGATGATTCCAAGGA+AGG | 0.556893 | 1.4:-1060900 | MS.gene63988:CDS |
| CCAGCACCCTATGTATCCAA+TGG | 0.559697 | 1.4:-1064471 | MS.gene63988:CDS |
| TGAAGGGTAAAATGGGAGAC+TGG | 0.560598 | 1.4:-1065562 | MS.gene63988:CDS |
| TACATCTTCCAACCCTTGGA+TGG | 0.561701 | 1.4:-1062580 | MS.gene63988:CDS |
| ACGATTGAAAGATAGTGAGT+TGG | 0.562483 | 1.4:-1060964 | MS.gene63988:CDS |
| TGCTTCAATCTCTTTCAAGT+GGG | 0.564069 | 1.4:+1060848 | None:intergenic |
| GATGGCAACGAATAATCCAT+TGG | 0.567685 | 1.4:+1064455 | None:intergenic |
| CTTACAAGTGGATGATTCCA+AGG | 0.573419 | 1.4:-1060904 | MS.gene63988:CDS |
| GAATAGAGCCATCCAAGGGT+TGG | 0.573837 | 1.4:+1062572 | None:intergenic |
| AATCATTGAGAGAACAGTTG+AGG | 0.578459 | 1.4:-1060935 | MS.gene63988:CDS |
| ATGCATCATGTGCCTCTCGT+TGG | 0.582171 | 1.4:+1061618 | None:intergenic |
| GTACAAAAGAAAGGCATGAA+GGG | 0.582899 | 1.4:-1065578 | MS.gene63988:CDS |
| AATTACCTGTATATCAGCTA+AGG | 0.584653 | 1.4:+1062914 | None:intergenic |
| TATGAAAACATACCTGCTCA+GGG | 0.585900 | 1.4:+1065224 | None:intergenic |
| AAATGGTTCTCTGTGAAGAT+GGG | 0.588526 | 1.4:-1063232 | MS.gene63988:CDS |
| TGTGTCAATCTCTTTCAAGT+AGG | 0.590254 | 1.4:+1060995 | None:intergenic |
| AAATGCAGCCAAAACCTCAT+GGG | 0.595175 | 1.4:+1065475 | None:intergenic |
| TTAGGTTTCAGAAAGTGAGA+TGG | 0.598092 | 1.4:-1061976 | MS.gene63988:intron |
| CAGCCTTCCAGAAACGGTCA+AGG | 0.607612 | 1.4:-1061674 | MS.gene63988:CDS |
| TCTAAGAGAGATTTACCAGA+GGG | 0.607699 | 1.4:-1061080 | MS.gene63988:CDS |
| AAAGACATTCTCAACAGATG+AGG | 0.611274 | 1.4:-1065450 | MS.gene63988:CDS |
| TGTCCAAGGCAGCCAAACAA+AGG | 0.611407 | 1.4:-1061588 | MS.gene63988:intron |
| GATGCATATGAAAATGTCCA+AGG | 0.619700 | 1.4:-1061602 | MS.gene63988:CDS |
| GGACTTCACAATAGATCGAA+AGG | 0.623377 | 1.4:-1061886 | MS.gene63988:intron |
| CCTGTGAATAGAGCCATCCA+AGG | 0.624216 | 1.4:+1062567 | None:intergenic |
| ACGATTGAAAGAAAGTGAAG+CGG | 0.626577 | 1.4:-1060817 | MS.gene63988:CDS |
| GTTCTTGCAAAGATCAAACA+TGG | 0.630093 | 1.4:-1062138 | MS.gene63988:CDS |
| TGCAGAAACTTGTCACGCGT+CGG | 0.631238 | 1.4:-1061175 | MS.gene63988:CDS |
| AGCGGAGATTGAATCATCGA+GGG | 0.645556 | 1.4:-1060799 | MS.gene63988:CDS |
| GAAGCTTGATTATGTTAGAG+TGG | 0.657464 | 1.4:-1062614 | MS.gene63988:CDS |
| CTGTGAATAGAGCCATCCAA+GGG | 0.666796 | 1.4:+1062568 | None:intergenic |
| ACAATCAACAGCAACCATTG+TGG | 0.670727 | 1.4:+1063256 | None:intergenic |
| ACTACACGAAATTGTTCCTG+GGG | 0.691492 | 1.4:-1061907 | MS.gene63988:CDS |
| AAGCGGAGATTGAATCATCG+AGG | 0.696061 | 1.4:-1060800 | MS.gene63988:CDS |
| TGACACAAACTATTCAACGA+AGG | 0.706014 | 1.4:+1062541 | None:intergenic |
| AGGGATAAGATCTACCACAA+TGG | 0.714725 | 1.4:-1063270 | MS.gene63988:CDS |
| TCCATCAAAGAGGTCCCATG+AGG | 0.716207 | 1.4:-1065489 | MS.gene63988:CDS |
| ATCTAAGAGAGATTTACCAG+AGG | 0.719694 | 1.4:-1061081 | MS.gene63988:CDS |
| ATGAAAACATACCTGCTCAG+GGG | 0.723649 | 1.4:+1065225 | None:intergenic |
| GGATGAGAAGATTGACACCG+CGG | 0.723985 | 1.4:-1066741 | MS.gene63988:CDS |
| GTATGAGCGATCCATCAAAG+AGG | 0.733411 | 1.4:-1065499 | MS.gene63988:CDS |
| TAGTGCTTCAGTGTTCACAG+TGG | 0.786374 | 1.4:+1061926 | None:intergenic |
| AGTTTATATAATGATCTACG+TGG | 0.789260 | 1.4:-1062769 | MS.gene63988:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTAAATTTTATAA+TGG | - | chr1.4:1062538-1062557 | MS.gene63988:intron | 0.0% |
| !! | AAAAAAAAAATCTATAGATA+TGG | + | chr1.4:1063640-1063659 | None:intergenic | 10.0% |
| !! | AATAATAAATTGTATATCTT+TGG | + | chr1.4:1063814-1063833 | None:intergenic | 10.0% |
| !! | ATTTCTATATAAATGTTTAA+AGG | - | chr1.4:1066023-1066042 | MS.gene63988:intron | 10.0% |
| !! | ATTTGTAAAAATTATAACAA+TGG | + | chr1.4:1062626-1062645 | None:intergenic | 10.0% |
| !! | TTATATAGAAATAGAAAATA+TGG | + | chr1.4:1066015-1066034 | None:intergenic | 10.0% |
| !! | TTTCTATATAAATGTTTAAA+GGG | - | chr1.4:1066024-1066043 | MS.gene63988:intron | 10.0% |
| !! | AAAAAAGCTAAAAAAAAACA+TGG | - | chr1.4:1063297-1063316 | MS.gene63988:CDS | 15.0% |
| !! | AAAATTCCTGAAAAAAATTA+AGG | + | chr1.4:1063592-1063611 | None:intergenic | 15.0% |
| !! | AAATTCCTGAAAAAAATTAA+GGG | + | chr1.4:1063591-1063610 | None:intergenic | 15.0% |
| !! | AACAATAAATATTAGGAAAA+TGG | - | chr1.4:1063764-1063783 | MS.gene63988:intron | 15.0% |
| !! | AACAGTAATGATAAAAAATA+TGG | - | chr1.4:1061929-1061948 | MS.gene63988:CDS | 15.0% |
| !! | ACAATAAATATTAGGAAAAT+GGG | - | chr1.4:1063765-1063784 | MS.gene63988:intron | 15.0% |
| !! | ACAGTAATGATAAAAAATAT+GGG | - | chr1.4:1061930-1061949 | MS.gene63988:CDS | 15.0% |
| !! | TAGAAATACTTATCAATTAT+TGG | + | chr1.4:1062377-1062396 | None:intergenic | 15.0% |
| !! | TGCAATTAACAATAAATATT+AGG | - | chr1.4:1063757-1063776 | MS.gene63988:intron | 15.0% |
| !! | TTAGTTAATTTATTTAGTGA+TGG | - | chr1.4:1064027-1064046 | MS.gene63988:intron | 15.0% |
| !!! | ATTTTAAAGATAATGCATAA+AGG | + | chr1.4:1062595-1062614 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTAATAAAGCTTA+TGG | - | chr1.4:1063324-1063343 | MS.gene63988:intron | 15.0% |
| !!! | TGTTTATTTTATTCTCATAT+TGG | + | chr1.4:1060861-1060880 | None:intergenic | 15.0% |
| !! | AAAATTATAACAATGGAACT+AGG | + | chr1.4:1062619-1062638 | None:intergenic | 20.0% |
| !! | AAAGCAAATCATATAGTAAA+AGG | + | chr1.4:1064009-1064028 | None:intergenic | 20.0% |
| !! | AAATAGTCATAAATATGTCA+AGG | - | chr1.4:1063152-1063171 | MS.gene63988:intron | 20.0% |
| !! | AAATATTGATAGATATGGAA+TGG | - | chr1.4:1063857-1063876 | MS.gene63988:intron | 20.0% |
| !! | AAATTATAACAATGGAACTA+GGG | + | chr1.4:1062618-1062637 | None:intergenic | 20.0% |
| !! | AATCTAATCAAGCAATAAAA+TGG | + | chr1.4:1060822-1060841 | None:intergenic | 20.0% |
| !! | ATATATCAGGAAAAAAACTA+GGG | - | chr1.4:1061640-1061659 | MS.gene63988:CDS | 20.0% |
| !! | ATCTAATCAAGCAATAAAAT+GGG | + | chr1.4:1060821-1060840 | None:intergenic | 20.0% |
| !! | CATATCTATCAATATTTAAG+AGG | + | chr1.4:1063854-1063873 | None:intergenic | 20.0% |
| !! | CATTTCAAAAACAAAACAAA+AGG | + | chr1.4:1061071-1061090 | None:intergenic | 20.0% |
| !! | CTCTTAAATATTGATAGATA+TGG | - | chr1.4:1063852-1063871 | MS.gene63988:intron | 20.0% |
| !! | GGAGAAAATATATTGAATTA+TGG | - | chr1.4:1061381-1061400 | MS.gene63988:intron | 20.0% |
| !! | GGTATAATAAATGTCAATAA+AGG | - | chr1.4:1061661-1061680 | MS.gene63988:CDS | 20.0% |
| !! | TCAATTTATGATAAGAAACT+TGG | + | chr1.4:1066148-1066167 | None:intergenic | 20.0% |
| !! | TCATGTTATTCCAATAATTA+CGG | + | chr1.4:1065651-1065670 | None:intergenic | 20.0% |
| !! | TGAGAATAAAATAAACATAG+CGG | - | chr1.4:1060864-1060883 | MS.gene63988:CDS | 20.0% |
| !! | TGTAAATTATTAGTCATACA+AGG | - | chr1.4:1064079-1064098 | MS.gene63988:intron | 20.0% |
| !! | TTTCATAATGATTGTTATGT+TGG | - | chr1.4:1062248-1062267 | MS.gene63988:intron | 20.0% |
| !!! | AAAAGACCATGTTTTTTTTA+AGG | + | chr1.4:1063246-1063265 | None:intergenic | 20.0% |
| !!! | ATTAACTTTATCTTTAGGAA+AGG | + | chr1.4:1062096-1062115 | None:intergenic | 20.0% |
| !!! | ATTGAAATTACTTTTTCGTA+CGG | - | chr1.4:1063407-1063426 | MS.gene63988:intron | 20.0% |
| !!! | ATTTCAAGATTTTCTACTAT+GGG | + | chr1.4:1060964-1060983 | None:intergenic | 20.0% |
| !!! | ATTTTGGATAATCATATATC+AGG | - | chr1.4:1061627-1061646 | MS.gene63988:CDS | 20.0% |
| !!! | ATTTTTTATCATTACTGTTC+AGG | + | chr1.4:1061928-1061947 | None:intergenic | 20.0% |
| !!! | GGCTTTTAACTTTATATTTA+GGG | + | chr1.4:1062059-1062078 | None:intergenic | 20.0% |
| !!! | GTTATATTCTATTTTTCTCA+AGG | + | chr1.4:1063188-1063207 | None:intergenic | 20.0% |
| !!! | TGCATTCATTTGAATATTTT+AGG | - | chr1.4:1061240-1061259 | MS.gene63988:intron | 20.0% |
| !!! | TTTAACTTTATATTTAGGGA+AGG | + | chr1.4:1062055-1062074 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAGGATAACA+TGG | - | chr1.4:1063264-1063283 | MS.gene63988:CDS | 20.0% |
| ! | AACTAATAATGAAAAAGTGG+CGG | + | chr1.4:1062564-1062583 | None:intergenic | 25.0% |
| ! | AATAATCCATTGGATACATA+GGG | + | chr1.4:1062994-1063013 | None:intergenic | 25.0% |
| ! | AATGATAAAAAATATGGGTC+AGG | - | chr1.4:1061935-1061954 | MS.gene63988:CDS | 25.0% |
| ! | AATTGCATTATAGATTGCTA+AGG | + | chr1.4:1063744-1063763 | None:intergenic | 25.0% |
| ! | AGAATAAAATAAACATAGCG+GGG | - | chr1.4:1060866-1060885 | MS.gene63988:CDS | 25.0% |
| ! | AGTGATAAACCTTAAGAAAA+AGG | - | chr1.4:1064159-1064178 | MS.gene63988:intron | 25.0% |
| ! | AGTTTATATAATGATCTACG+TGG | - | chr1.4:1064687-1064706 | MS.gene63988:intron | 25.0% |
| ! | AGTTTATTTGTTCGGAAAAT+GGG | - | chr1.4:1066325-1066344 | MS.gene63988:intron | 25.0% |
| ! | ATTGTATATGTACCTTTGTT+TGG | + | chr1.4:1065883-1065902 | None:intergenic | 25.0% |
| ! | ATTTGCTTCTTTGTTCTATT+CGG | - | chr1.4:1060783-1060802 | MS.gene63988:CDS | 25.0% |
| ! | CAGAAAGTAATATTAGAAGA+TGG | + | chr1.4:1062789-1062808 | None:intergenic | 25.0% |
| ! | CATATATCAGGAAAAAAACT+AGG | - | chr1.4:1061639-1061658 | MS.gene63988:CDS | 25.0% |
| ! | CTCGTAAAATATAGAAAAGA+TGG | + | chr1.4:1062300-1062319 | None:intergenic | 25.0% |
| ! | CTGGTAAAATATAGAAAAGA+CGG | + | chr1.4:1062346-1062365 | None:intergenic | 25.0% |
| ! | GAAAATAACACAGAAAAAAG+TGG | - | chr1.4:1063219-1063238 | MS.gene63988:CDS | 25.0% |
| ! | GAAATAGAAAATATGGATTC+AGG | + | chr1.4:1066008-1066027 | None:intergenic | 25.0% |
| ! | GAGAATAAAATAAACATAGC+GGG | - | chr1.4:1060865-1060884 | MS.gene63988:CDS | 25.0% |
| ! | GAGCAATGAAATATCAATAA+TGG | + | chr1.4:1063350-1063369 | None:intergenic | 25.0% |
| ! | GAGGTAATGTAATTTAATGA+TGG | - | chr1.4:1064289-1064308 | MS.gene63988:intron | 25.0% |
| ! | GTAAAATTGGTACAAAAGAA+AGG | - | chr1.4:1061869-1061888 | MS.gene63988:intron | 25.0% |
| ! | TAAAAAATGTCAAACCCTTA+AGG | + | chr1.4:1062525-1062544 | None:intergenic | 25.0% |
| ! | TAACAAACCTTATCAATAGA+TGG | + | chr1.4:1063022-1063041 | None:intergenic | 25.0% |
| ! | TAGGTTCAACATTCAAATTT+GGG | + | chr1.4:1062707-1062726 | None:intergenic | 25.0% |
| ! | TATACAATACAATGACTTAC+AGG | + | chr1.4:1065381-1065400 | None:intergenic | 25.0% |
| ! | TATTGCTTGATTAGATTGTT+GGG | - | chr1.4:1060825-1060844 | MS.gene63988:CDS | 25.0% |
| ! | TCAATTATTGGTACTATAAC+TGG | + | chr1.4:1062365-1062384 | None:intergenic | 25.0% |
| ! | TGATAGATAAACAACTGAAA+CGG | - | chr1.4:1061142-1061161 | MS.gene63988:CDS | 25.0% |
| ! | TGGAACTAATAATGAAAAAG+TGG | + | chr1.4:1062567-1062586 | None:intergenic | 25.0% |
| ! | TTAGGTTCAACATTCAAATT+TGG | + | chr1.4:1062708-1062727 | None:intergenic | 25.0% |
| ! | TTAGTAAACAAAATGAAACC+AGG | + | chr1.4:1064802-1064821 | None:intergenic | 25.0% |
| ! | TTATTGCTTGATTAGATTGT+TGG | - | chr1.4:1060824-1060843 | MS.gene63988:CDS | 25.0% |
| ! | TTGTAGTTATACAGTTAAAC+TGG | - | chr1.4:1065418-1065437 | MS.gene63988:intron | 25.0% |
| ! | TTTAGGAAAGGATATAAATC+AGG | + | chr1.4:1062084-1062103 | None:intergenic | 25.0% |
| !! | AAACGAAACAATTTCTTTTC+GGG | - | chr1.4:1064389-1064408 | MS.gene63988:intron | 25.0% |
| !! | ATCATATAGTAAAAGGTGTA+AGG | + | chr1.4:1064002-1064021 | None:intergenic | 25.0% |
| !! | ATTTAAAACCTTGAAAACAG+TGG | - | chr1.4:1061535-1061554 | MS.gene63988:intron | 25.0% |
| !! | ATTTTTACTTTCTTGTTCTC+GGG | + | chr1.4:1066418-1066437 | None:intergenic | 25.0% |
| !! | CAAACGAAACAATTTCTTTT+CGG | - | chr1.4:1064388-1064407 | MS.gene63988:intron | 25.0% |
| !! | CATTTCAAGATTTTCTACTA+TGG | + | chr1.4:1060965-1060984 | None:intergenic | 25.0% |
| !! | CATTTTTACTTTCTTGTTCT+CGG | + | chr1.4:1066419-1066438 | None:intergenic | 25.0% |
| !! | CTTGTAAGTCAACTTTTATA+TGG | + | chr1.4:1062662-1062681 | None:intergenic | 25.0% |
| !! | GTTGGTTGATATTGTAAAAT+TGG | - | chr1.4:1061856-1061875 | MS.gene63988:intron | 25.0% |
| !! | TAGGAAGCGTAAAAAATAAT+TGG | + | chr1.4:1062815-1062834 | None:intergenic | 25.0% |
| !! | TCAAGATTCAAAGTGTATTT+TGG | - | chr1.4:1061611-1061630 | MS.gene63988:CDS | 25.0% |
| !! | TTGAACTTTTGACATTGTAA+GGG | - | chr1.4:1061109-1061128 | MS.gene63988:CDS | 25.0% |
| !! | TTGGTTCTTAAAAATAGCTA+AGG | + | chr1.4:1065822-1065841 | None:intergenic | 25.0% |
| !! | TTTGAACTTTTGACATTGTA+AGG | - | chr1.4:1061108-1061127 | MS.gene63988:CDS | 25.0% |
| !!! | ATTACACAAACTTGTTAAAC+CGG | - | chr1.4:1064447-1064466 | MS.gene63988:CDS | 25.0% |
| !!! | CATGGTCTTTTTTTTTTTGA+AGG | - | chr1.4:1063255-1063274 | MS.gene63988:CDS | 25.0% |
| !!! | GGACTTTAAAATTTATCCTT+CGG | - | chr1.4:1065686-1065705 | MS.gene63988:intron | 25.0% |
| !!! | GGGCTTTTAACTTTATATTT+AGG | + | chr1.4:1062060-1062079 | None:intergenic | 25.0% |
| !!! | GTTATTTTTCCATCAGATTT+TGG | + | chr1.4:1066080-1066099 | None:intergenic | 25.0% |
| !!! | GTTTTCTGTGTATTTTTTTG+AGG | - | chr1.4:1062433-1062452 | MS.gene63988:intron | 25.0% |
| !!! | TCAAACCCTTAATTTTTTTC+AGG | - | chr1.4:1063583-1063602 | MS.gene63988:intron | 25.0% |
| !!! | TTGTATACTTTTTTCAGTAC+CGG | - | chr1.4:1065394-1065413 | MS.gene63988:intron | 25.0% |
| AACAAATGTAGCCACAATTA+CGG | + | chr1.4:1061457-1061476 | None:intergenic | 30.0% | |
| AACCAGGAAAAATAACACAA+CGG | + | chr1.4:1064786-1064805 | None:intergenic | 30.0% | |
| AAGAAGCAAATGCAAAACAA+AGG | + | chr1.4:1060774-1060793 | None:intergenic | 30.0% | |
| AATCATAATATTCGCATTGC+GGG | + | chr1.4:1064961-1064980 | None:intergenic | 30.0% | |
| AATTACCTGTATATCAGCTA+AGG | + | chr1.4:1064545-1064564 | None:intergenic | 30.0% | |
| AATTACTGCTCTGCATAAAA+TGG | - | chr1.4:1066705-1066724 | MS.gene63988:intron | 30.0% | |
| ACATGAATGTCTTCAATTTG+AGG | - | chr1.4:1065665-1065684 | MS.gene63988:intron | 30.0% | |
| AGTGGACCTTAAAAAAAACA+TGG | - | chr1.4:1063237-1063256 | MS.gene63988:CDS | 30.0% | |
| AGTGGATCATGAAATTGAAA+AGG | - | chr1.4:1066582-1066601 | MS.gene63988:intron | 30.0% | |
| AGTTATACAGTTAAACTGGT+TGG | - | chr1.4:1065422-1065441 | MS.gene63988:intron | 30.0% | |
| ATGAAGAAGTTGTTATCCAA+TGG | - | chr1.4:1064645-1064664 | MS.gene63988:intron | 30.0% | |
| ATTGATAGATATGGAATGGT+AGG | - | chr1.4:1063861-1063880 | MS.gene63988:intron | 30.0% | |
| ATTGTCCTTGATTTCTCAAT+TGG | - | chr1.4:1063948-1063967 | MS.gene63988:intron | 30.0% | |
| CAGTTTATTTGTTCGGAAAA+TGG | - | chr1.4:1066324-1066343 | MS.gene63988:intron | 30.0% | |
| CGAGAACAAGAAAGTAAAAA+TGG | - | chr1.4:1066417-1066436 | MS.gene63988:intron | 30.0% | |
| CTCAATATTTGAGTCAAAAC+TGG | + | chr1.4:1062407-1062426 | None:intergenic | 30.0% | |
| CTTATGCCTGTTCAAAAAAA+CGG | - | chr1.4:1066105-1066124 | MS.gene63988:intron | 30.0% | |
| GAAAAACAAAAGGCTAACAA+AGG | + | chr1.4:1061784-1061803 | None:intergenic | 30.0% | |
| GAATAATCCATTGGATACAT+AGG | + | chr1.4:1062995-1063014 | None:intergenic | 30.0% | |
| GAATCATAATATTCGCATTG+CGG | + | chr1.4:1064962-1064981 | None:intergenic | 30.0% | |
| GAGGTAAGATAAATGAAAGA+TGG | - | chr1.4:1065171-1065190 | MS.gene63988:intron | 30.0% | |
| GGAAAATGGGAAATTAAATG+AGG | - | chr1.4:1063778-1063797 | MS.gene63988:intron | 30.0% | |
| GTGTGTCTATAAATTCAACA+AGG | + | chr1.4:1063105-1063124 | None:intergenic | 30.0% | |
| TAAACTGTGTCCAACTAATA+TGG | + | chr1.4:1064673-1064692 | None:intergenic | 30.0% | |
| TAAATTTCATCCAGAGACAA+TGG | + | chr1.4:1063563-1063582 | None:intergenic | 30.0% | |
| TAAGCCATTTCCATTAACAT+TGG | - | chr1.4:1065347-1065366 | MS.gene63988:intron | 30.0% | |
| TACGGTTAGAAAAACATAGT+AGG | + | chr1.4:1062929-1062948 | None:intergenic | 30.0% | |
| TATGTGCACTGCAATAAAAA+AGG | + | chr1.4:1063527-1063546 | None:intergenic | 30.0% | |
| TCCTTCATTAAGCATTTGAA+AGG | + | chr1.4:1064600-1064619 | None:intergenic | 30.0% | |
| TCCTTTCAAATGCTTAATGA+AGG | - | chr1.4:1064596-1064615 | MS.gene63988:intron | 30.0% | |
| TCTATAAATTCAACAAGGAC+TGG | + | chr1.4:1063100-1063119 | None:intergenic | 30.0% | |
| TCTATAGATATGGAATACAG+TGG | + | chr1.4:1063630-1063649 | None:intergenic | 30.0% | |
| TGAACCAATGTTAATGGAAA+TGG | + | chr1.4:1065354-1065373 | None:intergenic | 30.0% | |
| TGAGTGTCAGTTTATTTGTT+CGG | - | chr1.4:1066317-1066336 | MS.gene63988:intron | 30.0% | |
| TGCTACAGTTTATAAGCATT+CGG | - | chr1.4:1064052-1064071 | MS.gene63988:intron | 30.0% | |
| TGGTAGCTAACATACAAAAA+AGG | - | chr1.4:1066725-1066744 | MS.gene63988:intron | 30.0% | |
| TGTTGTAGATCACAATTTAG+AGG | - | chr1.4:1064270-1064289 | MS.gene63988:intron | 30.0% | |
| TTAACTGTATAACTACAACC+CGG | + | chr1.4:1065416-1065435 | None:intergenic | 30.0% | |
| TTCAGTGCTTGAAAATGAAA+TGG | - | chr1.4:1063375-1063394 | MS.gene63988:intron | 30.0% | |
| ! | AAATATGGATTCAGGTATTG+TGG | + | chr1.4:1066000-1066019 | None:intergenic | 30.0% |
| ! | AACGAAACAATTTCTTTTCG+GGG | - | chr1.4:1064390-1064409 | MS.gene63988:intron | 30.0% |
| ! | AAGCATAGTTAATCCCTTTT+GGG | - | chr1.4:1066189-1066208 | MS.gene63988:intron | 30.0% |
| ! | ACGTTAAAGTATTAGCTTCT+GGG | + | chr1.4:1061828-1061847 | None:intergenic | 30.0% |
| ! | AGATGATTTCAGAACTTTTC+AGG | - | chr1.4:1064420-1064439 | MS.gene63988:intron | 30.0% |
| ! | ATCTTTGTAACAGTCTGTTT+TGG | - | chr1.4:1065227-1065246 | MS.gene63988:intron | 30.0% |
| ! | GATAATGCATAAAGGTACAA+TGG | + | chr1.4:1062587-1062606 | None:intergenic | 30.0% |
| ! | GTTTTTCTAACCGTAACTTT+TGG | - | chr1.4:1062934-1062953 | MS.gene63988:CDS | 30.0% |
| ! | TAAGTCAACTTTTATATGGC+AGG | + | chr1.4:1062658-1062677 | None:intergenic | 30.0% |
| ! | TCTTTGTAACAGTCTGTTTT+GGG | - | chr1.4:1065228-1065247 | MS.gene63988:intron | 30.0% |
| ! | TGAACTTTTGACATTGTAAG+GGG | - | chr1.4:1061110-1061129 | MS.gene63988:CDS | 30.0% |
| ! | TTACCATTTTGAATGCACAT+AGG | + | chr1.4:1063077-1063096 | None:intergenic | 30.0% |
| ! | TTTTTCCATCAGATTTTGGA+AGG | + | chr1.4:1066076-1066095 | None:intergenic | 30.0% |
| !! | AACACTGGTTTGATCAAAAA+AGG | + | chr1.4:1066227-1066246 | None:intergenic | 30.0% |
| !! | ACACTGGTTTGATCAAAAAA+GGG | + | chr1.4:1066226-1066245 | None:intergenic | 30.0% |
| !! | TATTTTTAAGAACCAACGAG+AGG | - | chr1.4:1065826-1065845 | MS.gene63988:intron | 30.0% |
| !! | TTGGGTTCAAGTTTTGTAAA+TGG | - | chr1.4:1061360-1061379 | MS.gene63988:intron | 30.0% |
| !! | TTTTTGCTGTGGAAAATGAA+GGG | - | chr1.4:1064130-1064149 | MS.gene63988:intron | 30.0% |
| !!! | GTATATCCGTTTTTTTGAAC+AGG | + | chr1.4:1066114-1066133 | None:intergenic | 30.0% |
| !!! | TCTTAGATGGCATTTTTTTG+TGG | + | chr1.4:1066363-1066382 | None:intergenic | 30.0% |
| !!! | TGTATACTTTTTTCAGTACC+GGG | - | chr1.4:1065395-1065414 | MS.gene63988:intron | 30.0% |
| !!! | TTGTTAGCCTTTTGTTTTTC+CGG | - | chr1.4:1061784-1061803 | MS.gene63988:intron | 30.0% |
| !!! | TTTATGTCACTTTTTTGCTG+TGG | - | chr1.4:1064119-1064138 | MS.gene63988:intron | 30.0% |
| !!! | TTTTTTGCTGTGGAAAATGA+AGG | - | chr1.4:1064129-1064148 | MS.gene63988:intron | 30.0% |
| AAAGACATTCTCAACAGATG+AGG | - | chr1.4:1062006-1062025 | MS.gene63988:intron | 35.0% | |
| AAATGGTTCTCTGTGAAGAT+GGG | - | chr1.4:1064224-1064243 | MS.gene63988:intron | 35.0% | |
| AAATGTCAAACCCTTAAGGA+TGG | + | chr1.4:1062521-1062540 | None:intergenic | 35.0% | |
| AACCCAATACCTTGTTCAAA+GGG | + | chr1.4:1061347-1061366 | None:intergenic | 35.0% | |
| AACCTTAAGAAAAAGGCCAA+AGG | - | chr1.4:1064166-1064185 | MS.gene63988:intron | 35.0% | |
| AACTAGACCGGAAAAACAAA+AGG | + | chr1.4:1061794-1061813 | None:intergenic | 35.0% | |
| AATCATTGAGAGAACAGTTG+AGG | - | chr1.4:1066521-1066540 | MS.gene63988:intron | 35.0% | |
| AATGGATCCTGAAGTTGAAA+AGG | - | chr1.4:1066435-1066454 | MS.gene63988:intron | 35.0% | |
| ACACACTCACAAGCAAATTA+CGG | - | chr1.4:1065149-1065168 | MS.gene63988:intron | 35.0% | |
| ACCTTAAGAAAAAGGCCAAA+GGG | - | chr1.4:1064167-1064186 | MS.gene63988:intron | 35.0% | |
| ACGATTGAAAGAAAGTGAAG+CGG | - | chr1.4:1066639-1066658 | MS.gene63988:intron | 35.0% | |
| ACGATTGAAAGATAGTGAGT+TGG | - | chr1.4:1066492-1066511 | MS.gene63988:intron | 35.0% | |
| ACTTTGTGTAGGACTCAAAT+GGG | - | chr1.4:1066254-1066273 | MS.gene63988:intron | 35.0% | |
| AGAGGTTCATCCGTAATTAT+TGG | - | chr1.4:1065638-1065657 | MS.gene63988:intron | 35.0% | |
| AGCATTTGAAAGGAAGACAA+AGG | + | chr1.4:1064590-1064609 | None:intergenic | 35.0% | |
| AGGAAAGGATATAAATCAGG+AGG | + | chr1.4:1062081-1062100 | None:intergenic | 35.0% | |
| ATCTAAGAGAGATTTACCAG+AGG | - | chr1.4:1066375-1066394 | MS.gene63988:intron | 35.0% | |
| ATGAATGCATAACAGTACCA+TGG | + | chr1.4:1061229-1061248 | None:intergenic | 35.0% | |
| ATTCTCCTTCCAAAATCTGA+TGG | - | chr1.4:1066068-1066087 | MS.gene63988:intron | 35.0% | |
| CAAAACAAAGGAGATACTGT+AGG | + | chr1.4:1060762-1060781 | None:intergenic | 35.0% | |
| CAAGTCAAGAAGTTCACATT+AGG | + | chr1.4:1063130-1063149 | None:intergenic | 35.0% | |
| CATGACCAATTGAGAAATCA+AGG | + | chr1.4:1063956-1063975 | None:intergenic | 35.0% | |
| CTTCACTTTCTTTCAATCGT+TGG | + | chr1.4:1066639-1066658 | None:intergenic | 35.0% | |
| CTTGTGAGTGTGTATTTGTA+TGG | + | chr1.4:1065142-1065161 | None:intergenic | 35.0% | |
| GAAAATGAGTAAGACTGATC+TGG | + | chr1.4:1062125-1062144 | None:intergenic | 35.0% | |
| GAAGCTTGATTATGTTAGAG+TGG | - | chr1.4:1064842-1064861 | MS.gene63988:intron | 35.0% | |
| GACTACAAAACAGAGATTAC+TGG | - | chr1.4:1064484-1064503 | MS.gene63988:CDS | 35.0% | |
| GATAAACAACTGAAACGGAA+AGG | - | chr1.4:1061147-1061166 | MS.gene63988:CDS | 35.0% | |
| GATGCATATGAAAATGTCCA+AGG | - | chr1.4:1065854-1065873 | MS.gene63988:intron | 35.0% | |
| GCTACAGTTTATAAGCATTC+GGG | - | chr1.4:1064053-1064072 | MS.gene63988:intron | 35.0% | |
| GGAAAGGATATAAATCAGGA+GGG | + | chr1.4:1062080-1062099 | None:intergenic | 35.0% | |
| GGGCGATTAACTTTATCTTT+AGG | + | chr1.4:1062101-1062120 | None:intergenic | 35.0% | |
| GTTCTTGCAAAGATCAAACA+TGG | - | chr1.4:1065318-1065337 | MS.gene63988:intron | 35.0% | |
| TACTTTGTGTAGGACTCAAA+TGG | - | chr1.4:1066253-1066272 | MS.gene63988:intron | 35.0% | |
| TAGTATGAGTTGTGGTCATA+TGG | - | chr1.4:1065013-1065032 | MS.gene63988:intron | 35.0% | |
| TAGTCTTTGATTGCTTTCTC+CGG | + | chr1.4:1064469-1064488 | None:intergenic | 35.0% | |
| TATGAAAACATACCTGCTCA+GGG | + | chr1.4:1062235-1062254 | None:intergenic | 35.0% | |
| TATTCAATCTGTGACACTCA+TGG | + | chr1.4:1061036-1061055 | None:intergenic | 35.0% | |
| TCATATGGTTATTCCTTTGG+AGG | - | chr1.4:1065028-1065047 | MS.gene63988:intron | 35.0% | |
| TCCAACTAATATGGTTCCAT+TGG | + | chr1.4:1064664-1064683 | None:intergenic | 35.0% | |
| TCCAATGGAACCATATTAGT+TGG | - | chr1.4:1064660-1064679 | MS.gene63988:intron | 35.0% | |
| TCTAAGAGAGATTTACCAGA+GGG | - | chr1.4:1066376-1066395 | MS.gene63988:intron | 35.0% | |
| TCTACAACGAAATTAGCAGT+AGG | + | chr1.4:1064752-1064771 | None:intergenic | 35.0% | |
| TCTGGTAAATCTCTCTTAGA+TGG | + | chr1.4:1066376-1066395 | None:intergenic | 35.0% | |
| TCTTACTTCACCATCCTTAA+GGG | - | chr1.4:1062508-1062527 | MS.gene63988:intron | 35.0% | |
| TGACACAAACTATTCAACGA+AGG | + | chr1.4:1064918-1064937 | None:intergenic | 35.0% | |
| TGGTCATATGGTTATTCCTT+TGG | - | chr1.4:1065025-1065044 | MS.gene63988:intron | 35.0% | |
| TGTTGTGCATTACTTTGTGT+AGG | - | chr1.4:1066243-1066262 | MS.gene63988:intron | 35.0% | |
| TTAAATTCTGATTGAAGCCG+CGG | + | chr1.4:1061521-1061540 | None:intergenic | 35.0% | |
| TTAGGTTTCAGAAAGTGAGA+TGG | - | chr1.4:1065480-1065499 | MS.gene63988:CDS | 35.0% | |
| TTATGAAAACATACCTGCTC+AGG | + | chr1.4:1062236-1062255 | None:intergenic | 35.0% | |
| TTCGTTGCCATCTATTGATA+AGG | - | chr1.4:1063012-1063031 | MS.gene63988:CDS | 35.0% | |
| TTCTTACTTCACCATCCTTA+AGG | - | chr1.4:1062507-1062526 | MS.gene63988:intron | 35.0% | |
| TTTCATTCATCTAAACCAGC+AGG | + | chr1.4:1061754-1061773 | None:intergenic | 35.0% | |
| TTTGTTTGGCTGTCTTTGAA+TGG | - | chr1.4:1064726-1064745 | MS.gene63988:intron | 35.0% | |
| ! | AAAGGACTTTTCTCACTAAC+TGG | - | chr1.4:1061165-1061184 | MS.gene63988:CDS | 35.0% |
| ! | AAAGGCATGAAGGGTAAAAT+GGG | - | chr1.4:1061887-1061906 | MS.gene63988:CDS | 35.0% |
| ! | AACTCTGATCTCCTATTTTC+TGG | - | chr1.4:1063047-1063066 | MS.gene63988:intron | 35.0% |
| ! | AGTGTCGTGAACATTTTGTT+TGG | - | chr1.4:1064712-1064731 | MS.gene63988:intron | 35.0% |
| ! | ATTCGTTTGTTGATTAGCTG+AGG | - | chr1.4:1065940-1065959 | MS.gene63988:intron | 35.0% |
| ! | CACGTTAAAGTATTAGCTTC+TGG | + | chr1.4:1061829-1061848 | None:intergenic | 35.0% |
| ! | CGACTAATCTGATTTGAACT+AGG | + | chr1.4:1061587-1061606 | None:intergenic | 35.0% |
| ! | CGTTAAAGTATTAGCTTCTG+GGG | + | chr1.4:1061827-1061846 | None:intergenic | 35.0% |
| ! | GAAGCATAGTTAATCCCTTT+TGG | - | chr1.4:1066188-1066207 | MS.gene63988:intron | 35.0% |
| ! | GTACAAAAGAAAGGCATGAA+GGG | - | chr1.4:1061878-1061897 | MS.gene63988:intron | 35.0% |
| ! | TGATGGTTCTTCCTTTTACT+CGG | - | chr1.4:1064306-1064325 | MS.gene63988:intron | 35.0% |
| ! | TGCTTCAATCTCTTTCAAGT+GGG | + | chr1.4:1066611-1066630 | None:intergenic | 35.0% |
| ! | TGTGTCAATCTCTTTCAAGT+AGG | + | chr1.4:1066464-1066483 | None:intergenic | 35.0% |
| ! | TTCGTTGAATAGTTTGTGTC+AGG | - | chr1.4:1064917-1064936 | MS.gene63988:intron | 35.0% |
| ! | TTCGTTTGTTGATTAGCTGA+GGG | - | chr1.4:1065941-1065960 | MS.gene63988:intron | 35.0% |
| ! | TTTTTGATGTATACACCTGC+TGG | - | chr1.4:1061736-1061755 | MS.gene63988:intron | 35.0% |
| !! | ACTGGTTTGATCAAAAAAGG+GGG | + | chr1.4:1066224-1066243 | None:intergenic | 35.0% |
| !! | CACTGGTTTGATCAAAAAAG+GGG | + | chr1.4:1066225-1066244 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGGCAACATCATG+CGG | - | chr1.4:1062156-1062175 | MS.gene63988:CDS | 35.0% |
| !!! | CGTTTTTTTGAACAGGCATA+AGG | + | chr1.4:1066107-1066126 | None:intergenic | 35.0% |
| !!! | CTGGGCTATTTTTCTTGTTT+GGG | - | chr1.4:1065734-1065753 | MS.gene63988:intron | 35.0% |
| !!! | GTTTGCTGTTCTCTCATTTT+AGG | - | chr1.4:1065462-1065481 | MS.gene63988:CDS | 35.0% |
| !!! | TCTTCTTGTGCTCAGTTTTT+TGG | - | chr1.4:1062143-1062162 | MS.gene63988:CDS | 35.0% |
| !!! | TGTTTTTTATCAGCGAGTTC+TGG | - | chr1.4:1061299-1061318 | MS.gene63988:intron | 35.0% |
| !!! | TTCCGTTGTGTTATTTTTCC+TGG | - | chr1.4:1064781-1064800 | MS.gene63988:intron | 35.0% |
| AAATGCAGCCAAAACCTCAT+GGG | + | chr1.4:1061984-1062003 | None:intergenic | 40.0% | |
| AATGAGTAAGACTGATCTGG+AGG | + | chr1.4:1062122-1062141 | None:intergenic | 40.0% | |
| ACAATCAACAGCAACCATTG+TGG | + | chr1.4:1064203-1064222 | None:intergenic | 40.0% | |
| ACATAGGCTGACCAGAAAAT+AGG | + | chr1.4:1063061-1063080 | None:intergenic | 40.0% | |
| ACCCAATACCTTGTTCAAAG+GGG | + | chr1.4:1061346-1061365 | None:intergenic | 40.0% | |
| ACTACACGAAATTGTTCCTG+GGG | - | chr1.4:1065549-1065568 | MS.gene63988:CDS | 40.0% | |
| AGGGATAAGATCTACCACAA+TGG | - | chr1.4:1064186-1064205 | MS.gene63988:intron | 40.0% | |
| AGGGATTAACTATGCTTCAG+TGG | + | chr1.4:1066186-1066205 | None:intergenic | 40.0% | |
| ATCAGTCACAAGCACATAGT+AGG | + | chr1.4:1062834-1062853 | None:intergenic | 40.0% | |
| ATGAAAACATACCTGCTCAG+GGG | + | chr1.4:1062234-1062253 | None:intergenic | 40.0% | |
| ATGAGTAAGACTGATCTGGA+GGG | + | chr1.4:1062121-1062140 | None:intergenic | 40.0% | |
| ATGTGCTTGTGACTGATGAT+GGG | - | chr1.4:1062837-1062856 | MS.gene63988:intron | 40.0% | |
| ATGTGTGGTAAGACTAGACA+AGG | - | chr1.4:1060889-1060908 | MS.gene63988:CDS | 40.0% | |
| ATTTCATCCAGAGACAATGG+TGG | + | chr1.4:1063560-1063579 | None:intergenic | 40.0% | |
| CACAAAGTAATGCACAACAC+TGG | + | chr1.4:1066242-1066261 | None:intergenic | 40.0% | |
| CACTACACGAAATTGTTCCT+GGG | - | chr1.4:1065548-1065567 | MS.gene63988:CDS | 40.0% | |
| CAGCCTATGTGCATTCAAAA+TGG | - | chr1.4:1063071-1063090 | MS.gene63988:intron | 40.0% | |
| CATCAGACAATTATCAGTCG+TGG | + | chr1.4:1062742-1062761 | None:intergenic | 40.0% | |
| CTCAACAGATGAGGATTTGA+AGG | - | chr1.4:1062015-1062034 | MS.gene63988:intron | 40.0% | |
| CTCTGTGATGCCAAAAGTTA+CGG | + | chr1.4:1062947-1062966 | None:intergenic | 40.0% | |
| CTTACAAGTGGATGATTCCA+AGG | - | chr1.4:1066552-1066571 | MS.gene63988:intron | 40.0% | |
| GAAATGGTTCTCTGTGAAGA+TGG | - | chr1.4:1064223-1064242 | MS.gene63988:intron | 40.0% | |
| GAACCCAATACCTTGTTCAA+AGG | + | chr1.4:1061348-1061367 | None:intergenic | 40.0% | |
| GAACTAGGTAAACCCACTTA+CGG | + | chr1.4:1061572-1061591 | None:intergenic | 40.0% | |
| GAGAGAACAGTTGAGGAAAA+AGG | - | chr1.4:1066528-1066547 | MS.gene63988:intron | 40.0% | |
| GAGGAAAAAGGACTTACAAG+TGG | - | chr1.4:1066540-1066559 | MS.gene63988:intron | 40.0% | |
| GAGGGAACAGTTGAGAAAAA+AGG | - | chr1.4:1066675-1066694 | MS.gene63988:intron | 40.0% | |
| GATGGCAACGAATAATCCAT+TGG | + | chr1.4:1063004-1063023 | None:intergenic | 40.0% | |
| GCTAATACTTTAACGTGCGT+AGG | - | chr1.4:1061832-1061851 | MS.gene63988:intron | 40.0% | |
| GGACTTCACAATAGATCGAA+AGG | - | chr1.4:1065570-1065589 | MS.gene63988:CDS | 40.0% | |
| GGCTATGAAGTTCGGAAAAA+GGG | - | chr1.4:1065249-1065268 | MS.gene63988:CDS | 40.0% | |
| GGCTCTTGAACCAATGTTAA+TGG | + | chr1.4:1065360-1065379 | None:intergenic | 40.0% | |
| GGTTAAGGAGAAAACTAGAC+CGG | + | chr1.4:1061806-1061825 | None:intergenic | 40.0% | |
| GTGCTTCAATCTCTTTCAAG+TGG | + | chr1.4:1066612-1066631 | None:intergenic | 40.0% | |
| GTGTAACGAAATTCCTCCAA+AGG | + | chr1.4:1065044-1065063 | None:intergenic | 40.0% | |
| TATGTCATTATGTCCTGCCA+TGG | - | chr1.4:1061209-1061228 | MS.gene63988:intron | 40.0% | |
| TATGTGCTTGTGACTGATGA+TGG | - | chr1.4:1062836-1062855 | MS.gene63988:intron | 40.0% | |
| TGATTCCAAGGAAGGAAAAG+TGG | - | chr1.4:1066564-1066583 | MS.gene63988:intron | 40.0% | |
| TGCTTGATTAGATTGTTGGG+TGG | - | chr1.4:1060828-1060847 | MS.gene63988:CDS | 40.0% | |
| TGTGGTAGATCTTATCCCTT+TGG | + | chr1.4:1064185-1064204 | None:intergenic | 40.0% | |
| TTGCTCCTTAGCTGATATAC+AGG | - | chr1.4:1064537-1064556 | MS.gene63988:intron | 40.0% | |
| TTTCAACTGTAGCCTCTGTT+AGG | - | chr1.4:1063711-1063730 | MS.gene63988:intron | 40.0% | |
| TTTCGTGATACCAAAGTAGC+AGG | + | chr1.4:1065921-1065940 | None:intergenic | 40.0% | |
| ! | CAAAACTGCCACTGTTTTCA+AGG | + | chr1.4:1061546-1061565 | None:intergenic | 40.0% |
| ! | GAAAGGCATGAAGGGTAAAA+TGG | - | chr1.4:1061886-1061905 | MS.gene63988:intron | 40.0% |
| ! | GAAAGTTACCTTCTTTTCCG+CGG | + | chr1.4:1060735-1060754 | None:intergenic | 40.0% |
| ! | GGTACAAAAGAAAGGCATGA+AGG | - | chr1.4:1061877-1061896 | MS.gene63988:intron | 40.0% |
| ! | GGTTGCTGTTGATTGTGAAA+TGG | - | chr1.4:1064207-1064226 | MS.gene63988:intron | 40.0% |
| ! | GTCGTGGTCTCTTGAATTTT+AGG | + | chr1.4:1062726-1062745 | None:intergenic | 40.0% |
| ! | TAGGCATCCTTTTCAACTTC+AGG | + | chr1.4:1066445-1066464 | None:intergenic | 40.0% |
| ! | TCAGGTATTGTGGTAGTGAA+TGG | + | chr1.4:1065990-1066009 | None:intergenic | 40.0% |
| !! | AATGTCAACAAGAGTACCGA+AGG | + | chr1.4:1065705-1065724 | None:intergenic | 40.0% |
| !! | AGTATTAGCTTCTGGGGTTA+AGG | + | chr1.4:1061821-1061840 | None:intergenic | 40.0% |
| !! | ATGATCCACTTTTCCTTCCT+TGG | + | chr1.4:1066572-1066591 | None:intergenic | 40.0% |
| !! | CTGTTTTGGGCTATGAAGTT+CGG | - | chr1.4:1065241-1065260 | MS.gene63988:CDS | 40.0% |
| !! | GAGTTCTGGTTCTAGTGATA+AGG | - | chr1.4:1061313-1061332 | MS.gene63988:intron | 40.0% |
| !! | TCCCTTTGGCCTTTTTCTTA+AGG | + | chr1.4:1064171-1064190 | None:intergenic | 40.0% |
| !!! | GCTGGGCTATTTTTCTTGTT+TGG | - | chr1.4:1065733-1065752 | MS.gene63988:intron | 40.0% |
| AACCTCTTCCTCAGAACAGT+GGG | + | chr1.4:1065625-1065644 | None:intergenic | 45.0% | |
| AAGAGAGAGAGAGAGAGAGT+TGG | - | chr1.4:1060931-1060950 | MS.gene63988:CDS | 45.0% | |
| AAGCGCAATGCCTCAATCTT+TGG | + | chr1.4:1064363-1064382 | None:intergenic | 45.0% | |
| AAGCGGAGATTGAATCATCG+AGG | - | chr1.4:1066656-1066675 | MS.gene63988:intron | 45.0% | |
| ACTTTAACGTGCGTAGGTGT+TGG | - | chr1.4:1061838-1061857 | MS.gene63988:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGTT+GGG | - | chr1.4:1060932-1060951 | MS.gene63988:CDS | 45.0% | |
| AGATTTACCAGAGGGTGAGA+TGG | - | chr1.4:1066384-1066403 | MS.gene63988:intron | 45.0% | |
| AGCGCAATGCCTCAATCTTT+GGG | + | chr1.4:1064362-1064381 | None:intergenic | 45.0% | |
| AGCGGAGATTGAATCATCGA+GGG | - | chr1.4:1066657-1066676 | MS.gene63988:intron | 45.0% | |
| ATGACGAGTCACCGAGTAAA+AGG | + | chr1.4:1064320-1064339 | None:intergenic | 45.0% | |
| ATGCATAACAGTACCATGGC+AGG | + | chr1.4:1061225-1061244 | None:intergenic | 45.0% | |
| CAAGTGGATGATTCCAAGGA+AGG | - | chr1.4:1066556-1066575 | MS.gene63988:intron | 45.0% | |
| CACAATTACGGTCATGATGC+TGG | + | chr1.4:1061445-1061464 | None:intergenic | 45.0% | |
| CACTCACAAGCAAATTACGG+AGG | - | chr1.4:1065152-1065171 | MS.gene63988:intron | 45.0% | |
| CAGAACAGTGGGATGCTTAA+AGG | + | chr1.4:1065614-1065633 | None:intergenic | 45.0% | |
| CAGCATCATGACCGTAATTG+TGG | - | chr1.4:1061443-1061462 | MS.gene63988:intron | 45.0% | |
| CCCAATACCTTGTTCAAAGG+GGG | + | chr1.4:1061345-1061364 | None:intergenic | 45.0% | |
| CTGTGAATAGAGCCATCCAA+GGG | + | chr1.4:1064891-1064910 | None:intergenic | 45.0% | |
| CTTATCTCCTTGACCGTTTC+TGG | + | chr1.4:1065792-1065811 | None:intergenic | 45.0% | |
| CTTCCTCTTAAAGCCATACC+CGG | - | chr1.4:1062466-1062485 | MS.gene63988:intron | 45.0% | |
| GAAATGCAGCCAAAACCTCA+TGG | + | chr1.4:1061985-1062004 | None:intergenic | 45.0% | |
| GCACTACACGAAATTGTTCC+TGG | - | chr1.4:1065547-1065566 | MS.gene63988:CDS | 45.0% | |
| GGGCTATGAAGTTCGGAAAA+AGG | - | chr1.4:1065248-1065267 | MS.gene63988:CDS | 45.0% | |
| GTATGAGCGATCCATCAAAG+AGG | - | chr1.4:1061957-1061976 | MS.gene63988:CDS | 45.0% | |
| GTGGTAAGACTAGACAAGGT+GGG | - | chr1.4:1060893-1060912 | MS.gene63988:CDS | 45.0% | |
| GTTGACATTCAGTCACTGCT+GGG | - | chr1.4:1065716-1065735 | MS.gene63988:intron | 45.0% | |
| TACATCTTCCAACCCTTGGA+TGG | - | chr1.4:1064876-1064895 | MS.gene63988:intron | 45.0% | |
| TAGTGCTTCAGTGTTCACAG+TGG | + | chr1.4:1065533-1065552 | None:intergenic | 45.0% | |
| TCCCCCTTTGAACAAGGTAT+TGG | - | chr1.4:1061341-1061360 | MS.gene63988:intron | 45.0% | |
| TGAAGATGGGACTGAAGCTT+TGG | - | chr1.4:1064237-1064256 | MS.gene63988:intron | 45.0% | |
| TGAAGGGTAAAATGGGAGAC+TGG | - | chr1.4:1061894-1061913 | MS.gene63988:CDS | 45.0% | |
| TGCATACATCTTCCAACCCT+TGG | - | chr1.4:1064872-1064891 | MS.gene63988:intron | 45.0% | |
| TGCTGCAATCTCTTGAATGG+CGG | + | chr1.4:1061489-1061508 | None:intergenic | 45.0% | |
| TGCTGTGGAAAATGAAGGGA+TGG | - | chr1.4:1064134-1064153 | MS.gene63988:intron | 45.0% | |
| TGTGGTAAGACTAGACAAGG+TGG | - | chr1.4:1060892-1060911 | MS.gene63988:CDS | 45.0% | |
| TGTTGACATTCAGTCACTGC+TGG | - | chr1.4:1065715-1065734 | MS.gene63988:intron | 45.0% | |
| TTAAGCATCCCACTGTTCTG+AGG | - | chr1.4:1065614-1065633 | MS.gene63988:intron | 45.0% | |
| TTGCTTCAGCCTTCCAGAAA+CGG | - | chr1.4:1065776-1065795 | MS.gene63988:intron | 45.0% | |
| ! | AAAGAGGTCCCATGAGGTTT+TGG | - | chr1.4:1061973-1061992 | MS.gene63988:CDS | 45.0% |
| ! | ATAAACATAGCGGGGATGTG+TGG | - | chr1.4:1060874-1060893 | MS.gene63988:CDS | 45.0% |
| ! | ATGCTCAATGCCTGCTACTT+TGG | - | chr1.4:1065908-1065927 | MS.gene63988:intron | 45.0% |
| ! | CCCCCTTTGAACAAGGTATT+GGG | - | chr1.4:1061342-1061361 | MS.gene63988:intron | 45.0% |
| ! | CGTAACTTTTGGCATCACAG+AGG | - | chr1.4:1062945-1062964 | MS.gene63988:CDS | 45.0% |
| ! | GAGTTTTCCCCCTTTGAACA+AGG | - | chr1.4:1061335-1061354 | MS.gene63988:intron | 45.0% |
| !! | GCAGTTTTGTCTCCGTAAGT+GGG | - | chr1.4:1061557-1061576 | MS.gene63988:intron | 45.0% |
| AAGCCAAAGACACATGCAGC+CGG | + | chr1.4:1062488-1062507 | None:intergenic | 50.0% | |
| ACATCAACCATCTCACCCTC+TGG | + | chr1.4:1066394-1066413 | None:intergenic | 50.0% | |
| ACCTCATGGGACCTCTTTGA+TGG | + | chr1.4:1061971-1061990 | None:intergenic | 50.0% | |
| ATCTGTGCTTGTCTGCGCTT+TGG | - | chr1.4:1065100-1065119 | MS.gene63988:intron | 50.0% | |
| ATGCATCATGTGCCTCTCGT+TGG | + | chr1.4:1065841-1065860 | None:intergenic | 50.0% | |
| CAATGCCTCAATCTTTGGGC+AGG | + | chr1.4:1064358-1064377 | None:intergenic | 50.0% | |
| CCAGCACCCTATGTATCCAA+TGG | - | chr1.4:1062985-1063004 | MS.gene63988:CDS | 50.0% | |
| CCATTGGATACATAGGGTGC+TGG | + | chr1.4:1062988-1063007 | None:intergenic | 50.0% | |
| CCTCAATCTTTGGGCAGGTA+GGG | + | chr1.4:1064353-1064372 | None:intergenic | 50.0% | |
| CCTGTGAATAGAGCCATCCA+AGG | + | chr1.4:1064892-1064911 | None:intergenic | 50.0% | |
| CGATCTATTGTGAAGTCCCC+AGG | + | chr1.4:1065568-1065587 | None:intergenic | 50.0% | |
| GAACCTCTTCCTCAGAACAG+TGG | + | chr1.4:1065626-1065645 | None:intergenic | 50.0% | |
| GAATAGAGCCATCCAAGGGT+TGG | + | chr1.4:1064887-1064906 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGTTG+GGG | - | chr1.4:1060933-1060952 | MS.gene63988:CDS | 50.0% | |
| GATTGACACCGCGGAAAAGA+AGG | - | chr1.4:1060724-1060743 | MS.gene63988:CDS | 50.0% | |
| GCGTGCTGCAATCTCTTGAA+TGG | + | chr1.4:1061492-1061511 | None:intergenic | 50.0% | |
| GCTTCAGTGTTCACAGTGGT+TGG | + | chr1.4:1065529-1065548 | None:intergenic | 50.0% | |
| GGATGAGAAGATTGACACCG+CGG | - | chr1.4:1060715-1060734 | MS.gene63988:CDS | 50.0% | |
| GGGTAAAATGGGAGACTGGA+AGG | - | chr1.4:1061898-1061917 | MS.gene63988:CDS | 50.0% | |
| TAAGGCCTCTCTCCTAACAG+AGG | + | chr1.4:1063726-1063745 | None:intergenic | 50.0% | |
| TCCATCAAAGAGGTCCCATG+AGG | - | chr1.4:1061967-1061986 | MS.gene63988:CDS | 50.0% | |
| TGCAGAAACTTGTCACGCGT+CGG | - | chr1.4:1066281-1066300 | MS.gene63988:intron | 50.0% | |
| TGTAGCCTCTGTTAGGAGAG+AGG | - | chr1.4:1063718-1063737 | MS.gene63988:intron | 50.0% | |
| TGTCCAAGGCAGCCAAACAA+AGG | - | chr1.4:1065868-1065887 | MS.gene63988:intron | 50.0% | |
| TTTGGGCAGGTAGGGAAGAA+GGG | + | chr1.4:1064345-1064364 | None:intergenic | 50.0% | |
| ! | CCTTGGATGGCTCTATTCAC+AGG | - | chr1.4:1064889-1064908 | MS.gene63988:intron | 50.0% |
| ! | GTACCTTTGTTTGGCTGCCT+TGG | + | chr1.4:1065874-1065893 | None:intergenic | 50.0% |
| ! | TCTCCTTGACCGTTTCTGGA+AGG | + | chr1.4:1065788-1065807 | None:intergenic | 50.0% |
| !! | AAAAGCGCCACCATTGTCTC+TGG | - | chr1.4:1063550-1063569 | MS.gene63988:intron | 50.0% |
| !! | ATCCCACTGTTCTGAGGAAG+AGG | - | chr1.4:1065620-1065639 | MS.gene63988:intron | 50.0% |
| !! | CGGGTATGGCTTTAAGAGGA+AGG | + | chr1.4:1062468-1062487 | None:intergenic | 50.0% |
| !! | GGCAGTTTTGTCTCCGTAAG+TGG | - | chr1.4:1061556-1061575 | MS.gene63988:intron | 50.0% |
| !! | TAGGGTGCTGGAGAGTTACT+TGG | + | chr1.4:1062976-1062995 | None:intergenic | 50.0% |
| AAGACACATGCAGCCGGGTA+TGG | + | chr1.4:1062482-1062501 | None:intergenic | 55.0% | |
| AGCCAAAGACACATGCAGCC+GGG | + | chr1.4:1062487-1062506 | None:intergenic | 55.0% | |
| ATCTCACGATTCCCCTGAGC+AGG | - | chr1.4:1062220-1062239 | MS.gene63988:intron | 55.0% | |
| CAGCCTTCCAGAAACGGTCA+AGG | - | chr1.4:1065782-1065801 | MS.gene63988:intron | 55.0% | |
| CCCTACCTGCCCAAAGATTG+AGG | - | chr1.4:1064350-1064369 | MS.gene63988:intron | 55.0% | |
| CGGTCATGATGCTGGTGCAA+TGG | + | chr1.4:1061437-1061456 | None:intergenic | 55.0% | |
| CTTTGGGCAGGTAGGGAAGA+AGG | + | chr1.4:1064346-1064365 | None:intergenic | 55.0% | |
| GCCTCAATCTTTGGGCAGGT+AGG | + | chr1.4:1064354-1064373 | None:intergenic | 55.0% | |
| TACCCGGCTGCATGTGTCTT+TGG | - | chr1.4:1062482-1062501 | MS.gene63988:intron | 55.0% | |
| TTGGGCAGGTAGGGAAGAAG+GGG | + | chr1.4:1064344-1064363 | None:intergenic | 55.0% | |
| !! | CAGCCGGGTATGGCTTTAAG+AGG | + | chr1.4:1062472-1062491 | None:intergenic | 55.0% |
| GGGGAGCAGCAAGCCCAAAA+GGG | + | chr1.4:1066205-1066224 | None:intergenic | 60.0% | |
| TTGCAGCACGCTTGCAACCG+CGG | - | chr1.4:1061501-1061520 | MS.gene63988:intron | 60.0% | |
| !! | TGTCACGCGTCGGCTGAGTA+CGG | - | chr1.4:1066291-1066310 | MS.gene63988:intron | 60.0% |
| GGGGGAGCAGCAAGCCCAAA+AGG | + | chr1.4:1066206-1066225 | None:intergenic | 65.0% | |
| !! | GTCACGCGTCGGCTGAGTAC+GGG | - | chr1.4:1066292-1066311 | MS.gene63988:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1060713 | 1066765 | 1060713 | ID=MS.gene63988 |
| chr1.4 | mRNA | 1060713 | 1066765 | 1060713 | ID=MS.gene63988.t1;Parent=MS.gene63988 |
| chr1.4 | exon | 1066733 | 1066765 | 1066733 | ID=MS.gene63988.t1.exon1;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1066733 | 1066765 | 1066733 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1065442 | 1065624 | 1065442 | ID=MS.gene63988.t1.exon2;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1065442 | 1065624 | 1065442 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1065237 | 1065320 | 1065237 | ID=MS.gene63988.t1.exon3;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1065237 | 1065320 | 1065237 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1064445 | 1064513 | 1064445 | ID=MS.gene63988.t1.exon4;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1064445 | 1064513 | 1064445 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1063187 | 1063327 | 1063187 | ID=MS.gene63988.t1.exon5;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1063187 | 1063327 | 1063187 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1062920 | 1063036 | 1062920 | ID=MS.gene63988.t1.exon6;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1062920 | 1063036 | 1062920 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1062770 | 1062839 | 1062770 | ID=MS.gene63988.t1.exon7;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1062770 | 1062839 | 1062770 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1062540 | 1062640 | 1062540 | ID=MS.gene63988.t1.exon8;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1062540 | 1062640 | 1062540 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1062098 | 1062238 | 1062098 | ID=MS.gene63988.t1.exon9;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1062098 | 1062238 | 1062098 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1061887 | 1061994 | 1061887 | ID=MS.gene63988.t1.exon10;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1061887 | 1061994 | 1061887 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1061589 | 1061693 | 1061589 | ID=MS.gene63988.t1.exon11;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1061589 | 1061693 | 1061589 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| chr1.4 | exon | 1060713 | 1061213 | 1060713 | ID=MS.gene63988.t1.exon12;Parent=MS.gene63988.t1 |
| chr1.4 | CDS | 1060713 | 1061213 | 1060713 | ID=cds.MS.gene63988.t1;Parent=MS.gene63988.t1 |
| Gene Sequence |
| Protein sequence |
