Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21926.t1 | XP_003610935.1 | 88.8 | 498 | 53 | 2 | 1 | 496 | 6 | 502 | 3.60E-188 | 667.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21926.t1 | Q93ZG9 | 55.8 | 502 | 184 | 9 | 1 | 494 | 6 | 477 | 5.1e-74 | 280.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21926.t1 | G7K7Y8 | 88.8 | 498 | 53 | 2 | 1 | 496 | 6 | 502 | 2.6e-188 | 667.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049207 | MS.gene21926 | 0.839993 | 1.14E-57 | -1.69E-46 |
MS.gene049254 | MS.gene21926 | 0.809493 | 1.84E-50 | -1.69E-46 |
MS.gene049473 | MS.gene21926 | 0.836314 | 1.01E-56 | -1.69E-46 |
MS.gene049824 | MS.gene21926 | 0.846867 | 1.66E-59 | -1.69E-46 |
MS.gene049825 | MS.gene21926 | 0.858855 | 6.18E-63 | -1.69E-46 |
MS.gene049873 | MS.gene21926 | 0.845904 | 3.03E-59 | -1.69E-46 |
MS.gene050277 | MS.gene21926 | 0.820856 | 5.50E-53 | -1.69E-46 |
MS.gene050303 | MS.gene21926 | 0.860691 | 1.73E-63 | -1.69E-46 |
MS.gene050355 | MS.gene21926 | 0.813131 | 2.99E-51 | -1.69E-46 |
MS.gene050427 | MS.gene21926 | 0.803672 | 3.12E-49 | -1.69E-46 |
MS.gene050559 | MS.gene21926 | 0.810191 | 1.30E-50 | -1.69E-46 |
MS.gene050885 | MS.gene21926 | 0.815672 | 8.20E-52 | -1.69E-46 |
MS.gene05134 | MS.gene21926 | 0.807613 | 4.64E-50 | -1.69E-46 |
MS.gene051363 | MS.gene21926 | 0.818032 | 2.42E-52 | -1.69E-46 |
MS.gene051597 | MS.gene21926 | 0.802013 | 6.86E-49 | -1.69E-46 |
MS.gene051700 | MS.gene21926 | 0.83252 | 9.02E-56 | -1.69E-46 |
MS.gene051744 | MS.gene21926 | 0.833437 | 5.34E-56 | -1.69E-46 |
MS.gene05188 | MS.gene21926 | 0.858376 | 8.60E-63 | -1.69E-46 |
MS.gene051975 | MS.gene21926 | 0.853882 | 1.78E-61 | -1.69E-46 |
MS.gene052012 | MS.gene21926 | 0.801675 | 8.05E-49 | -1.69E-46 |
MS.gene052519 | MS.gene21926 | 0.81504 | 1.13E-51 | -1.69E-46 |
MS.gene052582 | MS.gene21926 | 0.840199 | 1.00E-57 | -1.69E-46 |
MS.gene052584 | MS.gene21926 | 0.851898 | 6.57E-61 | -1.69E-46 |
MS.gene052717 | MS.gene21926 | 0.813873 | 2.05E-51 | -1.69E-46 |
MS.gene052947 | MS.gene21926 | 0.819735 | 9.93E-53 | -1.69E-46 |
MS.gene053006 | MS.gene21926 | 0.823447 | 1.38E-53 | -1.69E-46 |
MS.gene053058 | MS.gene21926 | 0.845595 | 3.68E-59 | -1.69E-46 |
MS.gene053080 | MS.gene21926 | 0.838057 | 3.61E-57 | -1.69E-46 |
MS.gene053122 | MS.gene21926 | 0.827992 | 1.15E-54 | -1.69E-46 |
MS.gene053226 | MS.gene21926 | 0.875218 | 3.66E-68 | -1.69E-46 |
MS.gene053294 | MS.gene21926 | 0.809276 | 2.05E-50 | -1.69E-46 |
MS.gene053298 | MS.gene21926 | 0.803442 | 3.48E-49 | -1.69E-46 |
MS.gene05364 | MS.gene21926 | 0.803364 | 3.61E-49 | -1.69E-46 |
MS.gene05365 | MS.gene21926 | 0.829028 | 6.47E-55 | -1.69E-46 |
MS.gene053963 | MS.gene21926 | 0.810348 | 1.21E-50 | -1.69E-46 |
MS.gene053995 | MS.gene21926 | 0.810397 | 1.18E-50 | -1.69E-46 |
MS.gene054651 | MS.gene21926 | 0.818822 | 1.60E-52 | -1.69E-46 |
MS.gene054657 | MS.gene21926 | 0.824461 | 7.97E-54 | -1.69E-46 |
MS.gene054658 | MS.gene21926 | 0.806275 | 8.90E-50 | -1.69E-46 |
MS.gene055166 | MS.gene21926 | 0.833812 | 4.30E-56 | -1.69E-46 |
MS.gene05517 | MS.gene21926 | 0.828484 | 8.76E-55 | -1.69E-46 |
MS.gene055222 | MS.gene21926 | 0.808894 | 2.47E-50 | -1.69E-46 |
MS.gene055512 | MS.gene21926 | 0.805642 | 1.21E-49 | -1.69E-46 |
MS.gene055513 | MS.gene21926 | 0.802521 | 5.39E-49 | -1.69E-46 |
MS.gene055555 | MS.gene21926 | 0.820471 | 6.74E-53 | -1.69E-46 |
MS.gene055586 | MS.gene21926 | 0.834625 | 2.69E-56 | -1.69E-46 |
MS.gene055589 | MS.gene21926 | 0.826002 | 3.44E-54 | -1.69E-46 |
MS.gene055603 | MS.gene21926 | 0.831663 | 1.47E-55 | -1.69E-46 |
MS.gene055778 | MS.gene21926 | 0.840358 | 9.13E-58 | -1.69E-46 |
MS.gene055808 | MS.gene21926 | 0.866119 | 3.60E-65 | -1.69E-46 |
MS.gene055841 | MS.gene21926 | 0.822135 | 2.78E-53 | -1.69E-46 |
MS.gene056091 | MS.gene21926 | 0.875215 | 3.67E-68 | -1.69E-46 |
MS.gene056215 | MS.gene21926 | 0.825516 | 4.49E-54 | -1.69E-46 |
MS.gene056403 | MS.gene21926 | 0.892632 | 1.33E-74 | -1.69E-46 |
MS.gene05659 | MS.gene21926 | 0.820445 | 6.83E-53 | -1.69E-46 |
MS.gene056605 | MS.gene21926 | 0.900871 | 4.75E-78 | -1.69E-46 |
MS.gene056631 | MS.gene21926 | 0.834447 | 2.98E-56 | -1.69E-46 |
MS.gene05689 | MS.gene21926 | 0.871695 | 5.62E-67 | -1.69E-46 |
MS.gene056986 | MS.gene21926 | 0.858537 | 7.70E-63 | -1.69E-46 |
MS.gene057102 | MS.gene21926 | 0.815886 | 7.35E-52 | -1.69E-46 |
MS.gene057208 | MS.gene21926 | 0.804808 | 1.81E-49 | -1.69E-46 |
MS.gene057314 | MS.gene21926 | 0.807221 | 5.62E-50 | -1.69E-46 |
MS.gene057555 | MS.gene21926 | 0.808263 | 3.37E-50 | -1.69E-46 |
MS.gene057693 | MS.gene21926 | 0.816105 | 6.56E-52 | -1.69E-46 |
MS.gene057705 | MS.gene21926 | 0.821384 | 4.16E-53 | -1.69E-46 |
MS.gene057915 | MS.gene21926 | 0.804134 | 2.50E-49 | -1.69E-46 |
MS.gene058037 | MS.gene21926 | 0.831163 | 1.95E-55 | -1.69E-46 |
MS.gene058084 | MS.gene21926 | 0.818142 | 2.29E-52 | -1.69E-46 |
MS.gene058126 | MS.gene21926 | 0.83963 | 1.41E-57 | -1.69E-46 |
MS.gene058498 | MS.gene21926 | 0.809243 | 2.08E-50 | -1.69E-46 |
MS.gene058500 | MS.gene21926 | 0.811346 | 7.33E-51 | -1.69E-46 |
MS.gene058548 | MS.gene21926 | 0.812461 | 4.19E-51 | -1.69E-46 |
MS.gene058549 | MS.gene21926 | 0.807899 | 4.03E-50 | -1.69E-46 |
MS.gene058625 | MS.gene21926 | 0.803205 | 3.89E-49 | -1.69E-46 |
MS.gene058908 | MS.gene21926 | 0.829415 | 5.21E-55 | -1.69E-46 |
MS.gene058911 | MS.gene21926 | 0.82373 | 1.18E-53 | -1.69E-46 |
MS.gene059146 | MS.gene21926 | 0.825349 | 4.92E-54 | -1.69E-46 |
MS.gene05950 | MS.gene21926 | 0.826222 | 3.05E-54 | -1.69E-46 |
MS.gene05953 | MS.gene21926 | 0.834581 | 2.76E-56 | -1.69E-46 |
MS.gene05954 | MS.gene21926 | 0.860135 | 2.55E-63 | -1.69E-46 |
MS.gene05978 | MS.gene21926 | 0.806217 | 9.16E-50 | -1.69E-46 |
MS.gene05979 | MS.gene21926 | 0.807056 | 6.09E-50 | -1.69E-46 |
MS.gene059830 | MS.gene21926 | 0.848294 | 6.72E-60 | -1.69E-46 |
MS.gene059842 | MS.gene21926 | 0.800269 | 1.56E-48 | -1.69E-46 |
MS.gene05985 | MS.gene21926 | -0.829813 | 4.17E-55 | -1.69E-46 |
MS.gene059901 | MS.gene21926 | -0.844378 | 7.85E-59 | -1.69E-46 |
MS.gene059935 | MS.gene21926 | 0.897996 | 8.18E-77 | -1.69E-46 |
MS.gene06001 | MS.gene21926 | 0.826878 | 2.13E-54 | -1.69E-46 |
MS.gene06011 | MS.gene21926 | 0.832789 | 7.73E-56 | -1.69E-46 |
MS.gene060365 | MS.gene21926 | 0.830512 | 2.82E-55 | -1.69E-46 |
MS.gene060429 | MS.gene21926 | 0.868619 | 5.71E-66 | -1.69E-46 |
MS.gene060572 | MS.gene21926 | 0.802013 | 6.86E-49 | -1.69E-46 |
MS.gene060586 | MS.gene21926 | 0.847634 | 1.02E-59 | -1.69E-46 |
MS.gene060763 | MS.gene21926 | 0.844738 | 6.28E-59 | -1.69E-46 |
MS.gene060830 | MS.gene21926 | 0.880574 | 4.91E-70 | -1.69E-46 |
MS.gene060935 | MS.gene21926 | 0.82222 | 2.66E-53 | -1.69E-46 |
MS.gene060937 | MS.gene21926 | 0.81317 | 2.93E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 109 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCGAAGCATCCATCTTTC+TGG | 0.194721 | 5.1:+2673632 | MS.gene21926:CDS |
AGCTTCTCCTTCAGCCTCTT+TGG | 0.225392 | 5.1:-2676129 | None:intergenic |
TTTCTTCAGGGATGAGGGTT+GGG | 0.234866 | 5.1:+2676756 | MS.gene21926:intron |
AGCATTCTTCAGTGCGCTTC+TGG | 0.249781 | 5.1:+2673500 | MS.gene21926:CDS |
ACTTACAATTCCACCATCTA+TGG | 0.251042 | 5.1:+2676790 | MS.gene21926:CDS |
CAGCTTCCAGTTGTCATTAG+AGG | 0.251117 | 5.1:+2674882 | MS.gene21926:CDS |
TCTGAATTTGATAGTGAAAA+TGG | 0.258524 | 5.1:+2673887 | MS.gene21926:CDS |
CATACCAAGTCGAAACTTAA+AGG | 0.287309 | 5.1:-2676524 | None:intergenic |
GACGACAATCAGCCTGAAAA+TGG | 0.313986 | 5.1:+2674786 | MS.gene21926:CDS |
TTGGGAGAGGACGTGGGAAC+TGG | 0.337787 | 5.1:+2673851 | MS.gene21926:CDS |
AAAATATTTGACTCGTGTAT+TGG | 0.338581 | 5.1:+2676493 | MS.gene21926:CDS |
GGATAGGTTCTCACGTTAGA+TGG | 0.341955 | 5.1:-2676239 | None:intergenic |
GGTTATAGAGGACATATCTA+TGG | 0.345544 | 5.1:+2676271 | MS.gene21926:CDS |
AGCAAAGCAATCGAAGAAAA+AGG | 0.355166 | 5.1:+2674818 | MS.gene21926:CDS |
AACCAGAAAGATGGATGCTT+CGG | 0.367662 | 5.1:-2673634 | None:intergenic |
TCTCTCGTGTCGTCGTCATC+TGG | 0.377480 | 5.1:-2673665 | None:intergenic |
ACAATGCAAAAGTGATTCAT+TGG | 0.381195 | 5.1:+2673832 | MS.gene21926:intron |
GGATGACTTGGTGGCATTCT+CGG | 0.384813 | 5.1:+2673601 | MS.gene21926:CDS |
GGAGTATACCACAAAATTCA+TGG | 0.385779 | 5.1:+2676976 | MS.gene21926:CDS |
TGCCCTTTGAATCTTAAGTT+TGG | 0.390870 | 5.1:+2673575 | MS.gene21926:CDS |
GCTTTGTCTGAAGTGGAAAT+CGG | 0.394739 | 5.1:-2674948 | None:intergenic |
ACAATTTCATACCCCATAGA+TGG | 0.396140 | 5.1:-2676803 | None:intergenic |
GTTGAGTTGGTTGGCGTTGA+AGG | 0.403304 | 5.1:+2677011 | MS.gene21926:CDS |
GGGTGGGATGTTGGCGTCAA+TGG | 0.405209 | 5.1:+2676648 | MS.gene21926:CDS |
GGGCACGTCTCAACCTTGTT+TGG | 0.412493 | 5.1:-2673557 | None:intergenic |
TCCTCTATAACCAATCCATT+TGG | 0.417967 | 5.1:-2676260 | None:intergenic |
TTGCATGAGAGACATTGTTC+TGG | 0.419904 | 5.1:-2675922 | None:intergenic |
TGAAAACCCTTACTCATCAT+TGG | 0.420043 | 5.1:-2675969 | None:intergenic |
TCCACATCGTCAGTACTATA+CGG | 0.427484 | 5.1:-2672364 | None:intergenic |
TTGTCACCTCTAATGACAAC+TGG | 0.439166 | 5.1:-2674888 | None:intergenic |
AGATTTAGCTTTGTCTGAAG+TGG | 0.441957 | 5.1:-2674955 | None:intergenic |
TTCTTCAGGGATGAGGGTTG+GGG | 0.443024 | 5.1:+2676757 | MS.gene21926:intron |
GGTTCTCACGTTAGATGGCT+TGG | 0.444994 | 5.1:-2676234 | None:intergenic |
CATGCAAAGGATGGAGATGA+TGG | 0.445035 | 5.1:+2675938 | MS.gene21926:CDS |
TGATTCATTGGGAGAGGACG+TGG | 0.450717 | 5.1:+2673844 | MS.gene21926:CDS |
GATGGCAAAAGAGCTGATCT+TGG | 0.455967 | 5.1:+2676302 | MS.gene21926:CDS |
CAGGTCAGTGTTAGATATAC+CGG | 0.457744 | 5.1:+2676451 | MS.gene21926:intron |
ATACCAAGTCGAAACTTAAA+GGG | 0.462033 | 5.1:-2676523 | None:intergenic |
TCCAAATGGATTGGTTATAG+AGG | 0.465197 | 5.1:+2676259 | MS.gene21926:CDS |
ACCAGAAAGATGGATGCTTC+GGG | 0.470599 | 5.1:-2673633 | None:intergenic |
CTAAAATTTCAGGCTACTCT+AGG | 0.474162 | 5.1:+2673455 | MS.gene21926:intron |
AGGTGACAATAAGTTTGTCT+TGG | 0.479792 | 5.1:+2674902 | MS.gene21926:CDS |
ATATTTGATGTTGAGTTGGT+TGG | 0.480042 | 5.1:+2677002 | MS.gene21926:CDS |
CTATACGGAACCGGATTGCC+AGG | 0.485280 | 5.1:-2672349 | None:intergenic |
GCACAAAATAACCAGAAAGA+TGG | 0.487484 | 5.1:-2673643 | None:intergenic |
CTTACAATTCCACCATCTAT+GGG | 0.490011 | 5.1:+2676791 | MS.gene21926:CDS |
GTCATCAAGGGGTGGGATGT+TGG | 0.490964 | 5.1:+2676639 | MS.gene21926:CDS |
GCTTATATTTGATGTTGAGT+TGG | 0.494265 | 5.1:+2676998 | MS.gene21926:CDS |
AACGTGAGAACCTATCCAAA+TGG | 0.495137 | 5.1:+2676245 | MS.gene21926:CDS |
AAGAGCTGATCTTGGAAAGA+AGG | 0.496054 | 5.1:+2676310 | MS.gene21926:CDS |
CTTTGTCTGAAGTGGAAATC+GGG | 0.496076 | 5.1:-2674947 | None:intergenic |
TGAAGTGAAACCTGGCAATC+CGG | 0.499808 | 5.1:+2672339 | MS.gene21926:CDS |
TTAGATGGCTTGGCTTCAGT+TGG | 0.504936 | 5.1:-2676224 | None:intergenic |
TCACCAAACTTAAGATTCAA+AGG | 0.507727 | 5.1:-2673578 | None:intergenic |
CTCAACCTTGTTTGGCAGCA+AGG | 0.509715 | 5.1:-2673549 | None:intergenic |
TGGGAGAGGACGTGGGAACT+GGG | 0.512185 | 5.1:+2673852 | MS.gene21926:CDS |
AACTGGGAAATCCAAGAAGA+AGG | 0.515282 | 5.1:+2675028 | MS.gene21926:CDS |
GTGTTCCTTGCTGCCAAACA+AGG | 0.525261 | 5.1:+2673544 | MS.gene21926:CDS |
TTTCAGGCTACTCTAGGCGT+TGG | 0.525313 | 5.1:+2673461 | MS.gene21926:intron |
TATAACCAATCCATTTGGAT+AGG | 0.528390 | 5.1:-2676255 | None:intergenic |
ACAAAATACCTCCACTACTC+CGG | 0.530163 | 5.1:-2673967 | None:intergenic |
CAATGCAAAAGTGATTCATT+GGG | 0.534185 | 5.1:+2673833 | MS.gene21926:intron |
ATGAGAGACATTGTTCTGGT+TGG | 0.538743 | 5.1:-2675918 | None:intergenic |
GCACCCTTTAAGTTTCGACT+TGG | 0.542842 | 5.1:+2676520 | MS.gene21926:CDS |
GTTTGGTGAGGATGACTTGG+TGG | 0.548655 | 5.1:+2673592 | MS.gene21926:CDS |
TGTACACATCTTCGCCAGTC+CGG | 0.549126 | 5.1:+2673948 | MS.gene21926:CDS |
AAGGCTGAAACAGAAACAAA+AGG | 0.552836 | 5.1:+2674987 | MS.gene21926:CDS |
TCGTCAGTACTATACGGAAC+CGG | 0.556211 | 5.1:-2672358 | None:intergenic |
CACCAAACTTAAGATTCAAA+GGG | 0.556434 | 5.1:-2673577 | None:intergenic |
GTTATAGAGGACATATCTAT+GGG | 0.558134 | 5.1:+2676272 | MS.gene21926:CDS |
CAAAAGTGATTCATTGGGAG+AGG | 0.559260 | 5.1:+2673838 | MS.gene21926:intron |
GAGAACCTATCCAAATGGAT+TGG | 0.560765 | 5.1:+2676250 | MS.gene21926:CDS |
TCTTCGCCAGTCCGGAGTAG+TGG | 0.561425 | 5.1:+2673956 | MS.gene21926:CDS |
TAAGTTTGGTGAGGATGACT+TGG | 0.562154 | 5.1:+2673589 | MS.gene21926:CDS |
GGAGGAAAGTGCTCATGTAA+AGG | 0.563185 | 5.1:+2675844 | MS.gene21926:CDS |
AGGATGAGCAGCTGCAAGAT+GGG | 0.567860 | 5.1:+2675105 | MS.gene21926:CDS |
AGGTGTAGGACAAGTCATCA+AGG | 0.569087 | 5.1:+2676626 | MS.gene21926:intron |
TTGGTGGCATTCTCGGTCGT+CGG | 0.569677 | 5.1:+2673608 | MS.gene21926:CDS |
TCAGGGATTGAAGTGAAACC+TGG | 0.572044 | 5.1:+2672331 | None:intergenic |
TTTGAATCTTAAGTTTGGTG+AGG | 0.577124 | 5.1:+2673580 | MS.gene21926:CDS |
CAAGTTGAAAGATCATGGTA+AGG | 0.578952 | 5.1:+2675823 | MS.gene21926:CDS |
AATGTCTCTCATGCAAAGGA+TGG | 0.579761 | 5.1:+2675929 | MS.gene21926:CDS |
TTGGAAAGTGAAGATGAAGA+TGG | 0.586293 | 5.1:+2674921 | MS.gene21926:CDS |
AGCTAAATCTGAGTCTCAGA+AGG | 0.587477 | 5.1:+2674968 | MS.gene21926:CDS |
GATATGGTGACAAACGTGTT+GGG | 0.590168 | 5.1:+2676955 | MS.gene21926:intron |
AGGAAAGCTTCACGTCACTC+AGG | 0.592401 | 5.1:+2672387 | MS.gene21926:CDS |
ATATCTATGGGCAAACCAGA+TGG | 0.595038 | 5.1:+2676284 | MS.gene21926:CDS |
GGTGTAGGACAAGTCATCAA+GGG | 0.596781 | 5.1:+2676627 | MS.gene21926:intron |
GAGGATGAGCAGCTGCAAGA+TGG | 0.601018 | 5.1:+2675104 | MS.gene21926:CDS |
GGACGTGGGAACTGGGTCAG+AGG | 0.603866 | 5.1:+2673859 | MS.gene21926:CDS |
AGGACAAGTCATCAAGGGGT+GGG | 0.609520 | 5.1:+2676632 | MS.gene21926:CDS |
ATACCTCCACTACTCCGGAC+TGG | 0.610928 | 5.1:-2673962 | None:intergenic |
GAACAATGTCTCTCATGCAA+AGG | 0.611604 | 5.1:+2675925 | MS.gene21926:CDS |
TAGGACAAGTCATCAAGGGG+TGG | 0.614183 | 5.1:+2676631 | MS.gene21926:CDS |
TCGCCAGTCCGGAGTAGTGG+AGG | 0.614191 | 5.1:+2673959 | MS.gene21926:CDS |
GTTGAAAGATCATGGTAAGG+AGG | 0.614660 | 5.1:+2675826 | MS.gene21926:CDS |
ATGCAAAGGATGGAGATGAT+GGG | 0.616446 | 5.1:+2675939 | MS.gene21926:CDS |
ATTTCATACCCCATAGATGG+TGG | 0.621077 | 5.1:-2676800 | None:intergenic |
AGATATGGTGACAAACGTGT+TGG | 0.627092 | 5.1:+2676954 | MS.gene21926:intron |
TCCGTATAGTACTGACGATG+TGG | 0.632230 | 5.1:+2672363 | MS.gene21926:CDS |
TCTAGGCGTTGGTCCATCGA+CGG | 0.649382 | 5.1:+2673472 | MS.gene21926:CDS |
TATAGTACTGACGATGTGGA+AGG | 0.650155 | 5.1:+2672367 | MS.gene21926:CDS |
AAAAGTTCAAGCTGTCGATG+AGG | 0.663434 | 5.1:+2675085 | MS.gene21926:CDS |
GTGTAGGACAAGTCATCAAG+GGG | 0.668593 | 5.1:+2676628 | MS.gene21926:CDS |
GCCAGATGAAAAGTCTGAGG+AGG | 0.674614 | 5.1:+2675883 | MS.gene21926:CDS |
TGTGCCAGATGAAAAGTCTG+AGG | 0.679651 | 5.1:+2675880 | MS.gene21926:CDS |
GATTCATTGGGAGAGGACGT+GGG | 0.690481 | 5.1:+2673845 | MS.gene21926:CDS |
GCTCACTTGAAAGAGAAACC+CGG | 0.694878 | 5.1:+2674849 | MS.gene21926:CDS |
TTACAATTCCACCATCTATG+GGG | 0.701878 | 5.1:+2676792 | MS.gene21926:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATTTATTTATGAATC+CGG | - | chr5.1:2674145-2674164 | None:intergenic | 10.0% |
!! | ACGTTAACTAAAATATTATA+GGG | + | chr5.1:2674194-2674213 | MS.gene21926:intron | 15.0% |
!! | CAAATAAATGCATATTATAT+AGG | - | chr5.1:2673322-2673341 | None:intergenic | 15.0% |
!! | CAATTATTATTTATCATCTA+AGG | - | chr5.1:2672652-2672671 | None:intergenic | 15.0% |
!! | TAATTACTAAACACTTTAAT+AGG | - | chr5.1:2674296-2674315 | None:intergenic | 15.0% |
!!! | ATTTATCTTTTATTTTCTTC+AGG | + | chr5.1:2676743-2676762 | MS.gene21926:intron | 15.0% |
!!! | CAATTTTTAAAAAACAGATT+TGG | - | chr5.1:2675667-2675686 | None:intergenic | 15.0% |
!!! | TTAAATTTTAAAAATGTTCC+TGG | - | chr5.1:2674329-2674348 | None:intergenic | 15.0% |
!!! | TTTATCTTTTATTTTCTTCA+GGG | + | chr5.1:2676744-2676763 | MS.gene21926:intron | 15.0% |
!!! | TTTGAAAATTCAAAAACTTT+TGG | + | chr5.1:2675287-2675306 | MS.gene21926:intron | 15.0% |
!! | AAAGAAAACTGAAAAATACA+AGG | + | chr5.1:2674637-2674656 | MS.gene21926:intron | 20.0% |
!! | AAGAAACTGGATTATAAAAT+AGG | - | chr5.1:2676405-2676424 | None:intergenic | 20.0% |
!! | AATAAATAATCCAGATACTT+TGG | + | chr5.1:2675220-2675239 | MS.gene21926:intron | 20.0% |
!! | AATCTTATTACGTTATTACT+AGG | - | chr5.1:2676688-2676707 | None:intergenic | 20.0% |
!! | AATTGAAGTATATGCATTAT+TGG | + | chr5.1:2672672-2672691 | MS.gene21926:intron | 20.0% |
!! | ATAAATAATCCAGATACTTT+GGG | + | chr5.1:2675221-2675240 | MS.gene21926:intron | 20.0% |
!! | CAAACGATAAATATAGATAA+AGG | - | chr5.1:2676605-2676624 | None:intergenic | 20.0% |
!! | CAATATTGTACATTTCTAAA+TGG | - | chr5.1:2675553-2675572 | None:intergenic | 20.0% |
!! | CACGTTAACTAAAATATTAT+AGG | + | chr5.1:2674193-2674212 | MS.gene21926:intron | 20.0% |
!! | CGTTAACTAAAATATTATAG+GGG | + | chr5.1:2674195-2674214 | MS.gene21926:intron | 20.0% |
!! | GAATTAAAAGACAAACTATT+TGG | - | chr5.1:2675639-2675658 | None:intergenic | 20.0% |
!! | GAATTAATGTGTTGAATTTA+TGG | - | chr5.1:2672826-2672845 | None:intergenic | 20.0% |
!! | TAAATTCAACACATTAATTC+TGG | + | chr5.1:2672826-2672845 | MS.gene21926:intron | 20.0% |
!!! | AAAATTCAAAAACTTTTGCT+AGG | + | chr5.1:2675291-2675310 | MS.gene21926:intron | 20.0% |
!!! | AAAATTCAAAAACTTTTGGT+AGG | + | chr5.1:2675389-2675408 | MS.gene21926:intron | 20.0% |
!!! | AGTAATTAATTTAGTTTTCC+AGG | + | chr5.1:2674308-2674327 | MS.gene21926:intron | 20.0% |
!!! | GATGTTTTTACTGTTTATTA+GGG | + | chr5.1:2672516-2672535 | MS.gene21926:intron | 20.0% |
!!! | TGATGTTTTTACTGTTTATT+AGG | + | chr5.1:2672515-2672534 | MS.gene21926:intron | 20.0% |
!!! | TTTGGTACATTTTTCATTAA+TGG | + | chr5.1:2675509-2675528 | MS.gene21926:intron | 20.0% |
! | AAATCATATTGGACTTCAAA+AGG | - | chr5.1:2673395-2673414 | None:intergenic | 25.0% |
! | AACAAGCTCAAAAAAAAACT+GGG | + | chr5.1:2675012-2675031 | MS.gene21926:CDS | 25.0% |
! | AAGTCAATAACTAAAAACCA+AGG | - | chr5.1:2673205-2673224 | None:intergenic | 25.0% |
! | ACAAAAGCTAGTTATTCAAA+AGG | - | chr5.1:2673707-2673726 | None:intergenic | 25.0% |
! | ACGACAAAATTATCACAAAA+AGG | - | chr5.1:2672880-2672899 | None:intergenic | 25.0% |
! | ACGTTTCTGATAATAATTTC+AGG | + | chr5.1:2675780-2675799 | MS.gene21926:intron | 25.0% |
! | ATCCCATTTAACAAAGAATA+TGG | - | chr5.1:2676892-2676911 | None:intergenic | 25.0% |
! | ATGAAAACTTGAAACAAACA+TGG | + | chr5.1:2674498-2674517 | MS.gene21926:intron | 25.0% |
! | ATGCCATATTCTTTGTTAAA+TGG | + | chr5.1:2676886-2676905 | MS.gene21926:intron | 25.0% |
! | GTATATCCATGTAATTCTAT+AGG | - | chr5.1:2672720-2672739 | None:intergenic | 25.0% |
! | TATCTATATTTATCGTTTGC+AGG | + | chr5.1:2676606-2676625 | MS.gene21926:intron | 25.0% |
! | TCGTAACCATAAAATCATAT+TGG | - | chr5.1:2673406-2673425 | None:intergenic | 25.0% |
! | TGAAAACTTGAAACAAACAT+GGG | + | chr5.1:2674499-2674518 | MS.gene21926:intron | 25.0% |
! | TGCCATATTCTTTGTTAAAT+GGG | + | chr5.1:2676887-2676906 | MS.gene21926:intron | 25.0% |
! | TGGAAAAAACATCATGTTAT+TGG | - | chr5.1:2674085-2674104 | None:intergenic | 25.0% |
! | TTAATAGGATTAAGATTCCT+AGG | - | chr5.1:2674281-2674300 | None:intergenic | 25.0% |
! | TTATATGTATGAGCATTTGA+TGG | - | chr5.1:2674017-2674036 | None:intergenic | 25.0% |
! | TTATTCCCATGTTAAAGTAT+GGG | - | chr5.1:2674443-2674462 | None:intergenic | 25.0% |
! | TTTAACATGGGAATAAAAAG+TGG | + | chr5.1:2674447-2674466 | MS.gene21926:intron | 25.0% |
! | TTTATTCCCATGTTAAAGTA+TGG | - | chr5.1:2674444-2674463 | None:intergenic | 25.0% |
! | TTTCTATTCCTAAATCAAAC+AGG | - | chr5.1:2675193-2675212 | None:intergenic | 25.0% |
!! | AAAAACAAGTTGAAAGATCA+TGG | + | chr5.1:2675818-2675837 | MS.gene21926:CDS | 25.0% |
!! | AAAACTGAAACAGATTTTAG+TGG | + | chr5.1:2675470-2675489 | MS.gene21926:intron | 25.0% |
!! | AAAATATTTGACTCGTGTAT+TGG | + | chr5.1:2676493-2676512 | MS.gene21926:CDS | 25.0% |
!! | AATAATTTCACGACTTTTCT+TGG | + | chr5.1:2672942-2672961 | MS.gene21926:intron | 25.0% |
!! | AATATAAGCCATGAATTTTG+TGG | - | chr5.1:2676987-2677006 | None:intergenic | 25.0% |
!! | AGTTTTCATAAATTATGCCT+AGG | - | chr5.1:2674487-2674506 | None:intergenic | 25.0% |
!! | TAACTTTTTAATAATCCACG+TGG | + | chr5.1:2675137-2675156 | MS.gene21926:intron | 25.0% |
!! | TGAAGTCCAATATGATTTTA+TGG | + | chr5.1:2673397-2673416 | MS.gene21926:intron | 25.0% |
!! | TGATAATTTTGTCGTTGAAT+TGG | + | chr5.1:2672885-2672904 | MS.gene21926:intron | 25.0% |
!!! | AAACAGTTTTTCAGATACTT+TGG | + | chr5.1:2675166-2675185 | MS.gene21926:intron | 25.0% |
!!! | AAACTGAAACAGATTTTAGT+GGG | + | chr5.1:2675471-2675490 | MS.gene21926:intron | 25.0% |
!!! | AACAGTTTTTCAGATACTTT+GGG | + | chr5.1:2675167-2675186 | MS.gene21926:intron | 25.0% |
!!! | GATGTTTTTTCCAGTAAATT+TGG | + | chr5.1:2674092-2674111 | MS.gene21926:intron | 25.0% |
!!! | TAAGAGTTTATGGTGTTTTT+TGG | + | chr5.1:2676059-2676078 | MS.gene21926:intron | 25.0% |
!!! | TCTGAATTTGATAGTGAAAA+TGG | + | chr5.1:2673887-2673906 | MS.gene21926:CDS | 25.0% |
!!! | TGACAAATCATTTTTATCAG+CGG | - | chr5.1:2673249-2673268 | None:intergenic | 25.0% |
!!! | TTTGAATAACTAGCTTTTGT+TGG | + | chr5.1:2673707-2673726 | MS.gene21926:intron | 25.0% |
!!! | TTTTGAGAACTAAATCAAAC+AGG | - | chr5.1:2675247-2675266 | None:intergenic | 25.0% |
AAAAAATAAGCCCATCCAAA+TGG | + | chr5.1:2673178-2673197 | MS.gene21926:intron | 30.0% | |
AAAAATAAGCCCATCCAAAT+GGG | + | chr5.1:2673179-2673198 | MS.gene21926:intron | 30.0% | |
AAACTATCCAATGATGAGTA+AGG | + | chr5.1:2675962-2675981 | MS.gene21926:intron | 30.0% | |
AAAGAAGAAAAAGACCAAAG+AGG | + | chr5.1:2676115-2676134 | MS.gene21926:CDS | 30.0% | |
AAAGAATATGGCATCTAACA+CGG | - | chr5.1:2676880-2676899 | None:intergenic | 30.0% | |
AAATCACACCAAAGACATAT+TGG | - | chr5.1:2676829-2676848 | None:intergenic | 30.0% | |
AACCATTCGTTGTATAATCT+AGG | + | chr5.1:2672544-2672563 | MS.gene21926:intron | 30.0% | |
AACCTAGATTATACAACGAA+TGG | - | chr5.1:2672549-2672568 | None:intergenic | 30.0% | |
AACTATCCAATGATGAGTAA+GGG | + | chr5.1:2675963-2675982 | MS.gene21926:intron | 30.0% | |
AAGAGTTAAAATAGTGTGAG+TGG | + | chr5.1:2674372-2674391 | MS.gene21926:intron | 30.0% | |
AAGATTCCCATACTTTAACA+TGG | + | chr5.1:2674434-2674453 | MS.gene21926:intron | 30.0% | |
AAGGATTAAATTTACAGTCC+TGG | + | chr5.1:2674230-2674249 | MS.gene21926:intron | 30.0% | |
ACAATGCAAAAGTGATTCAT+TGG | + | chr5.1:2673832-2673851 | MS.gene21926:intron | 30.0% | |
AGAAGAATACAAAACAGAGA+AGG | - | chr5.1:2676014-2676033 | None:intergenic | 30.0% | |
AGAGTTAAAATAGTGTGAGT+GGG | + | chr5.1:2674373-2674392 | MS.gene21926:intron | 30.0% | |
AGATTCCCATACTTTAACAT+GGG | + | chr5.1:2674435-2674454 | MS.gene21926:intron | 30.0% | |
AGGATTAAATTTACAGTCCT+GGG | + | chr5.1:2674231-2674250 | MS.gene21926:intron | 30.0% | |
ATAATCCAGTTTCTTCTGAT+AGG | + | chr5.1:2676410-2676429 | MS.gene21926:intron | 30.0% | |
ATACCAAGTCGAAACTTAAA+GGG | - | chr5.1:2676526-2676545 | None:intergenic | 30.0% | |
ATGCATTTATTTGCTTGCAT+TGG | + | chr5.1:2673329-2673348 | MS.gene21926:intron | 30.0% | |
CAATGCAAAAGTGATTCATT+GGG | + | chr5.1:2673833-2673852 | MS.gene21926:intron | 30.0% | |
CACCAAACTTAAGATTCAAA+GGG | - | chr5.1:2673580-2673599 | None:intergenic | 30.0% | |
CCAACACAAATATAGACAAA+GGG | - | chr5.1:2675740-2675759 | None:intergenic | 30.0% | |
GAAATTGTCCAATATGTCTT+TGG | + | chr5.1:2676818-2676837 | MS.gene21926:intron | 30.0% | |
GAACAAGCTCAAAAAAAAAC+TGG | + | chr5.1:2675011-2675030 | MS.gene21926:CDS | 30.0% | |
GAAGAATACAAAACAGAGAA+GGG | - | chr5.1:2676013-2676032 | None:intergenic | 30.0% | |
GCTTATATTTGATGTTGAGT+TGG | + | chr5.1:2676998-2677017 | MS.gene21926:CDS | 30.0% | |
GGTCAAACAAAATTACACAT+TGG | - | chr5.1:2676384-2676403 | None:intergenic | 30.0% | |
GTTATAGAGGACATATCTAT+GGG | + | chr5.1:2676272-2676291 | MS.gene21926:CDS | 30.0% | |
TAGTATTTGCTTTGCTTTGT+TGG | + | chr5.1:2673274-2673293 | MS.gene21926:intron | 30.0% | |
TATAACCAATCCATTTGGAT+AGG | - | chr5.1:2676258-2676277 | None:intergenic | 30.0% | |
TCACCAAACTTAAGATTCAA+AGG | - | chr5.1:2673581-2673600 | None:intergenic | 30.0% | |
TCCAACACAAATATAGACAA+AGG | - | chr5.1:2675741-2675760 | None:intergenic | 30.0% | |
TGCATTCCTATAGAATTACA+TGG | + | chr5.1:2672711-2672730 | MS.gene21926:intron | 30.0% | |
TGCTAACTGTTAAGAGTTTA+TGG | + | chr5.1:2676049-2676068 | MS.gene21926:intron | 30.0% | |
TTAAATGGGATGACTTTGAT+TGG | + | chr5.1:2676901-2676920 | MS.gene21926:intron | 30.0% | |
! | GAAATCCTTGTTTGATATTC+AGG | + | chr5.1:2676432-2676451 | MS.gene21926:intron | 30.0% |
! | TTTGAATCTTAAGTTTGGTG+AGG | + | chr5.1:2673580-2673599 | MS.gene21926:CDS | 30.0% |
!! | ATATTTGATGTTGAGTTGGT+TGG | + | chr5.1:2677002-2677021 | MS.gene21926:CDS | 30.0% |
!! | TTTATTTTCTTCAGGGATGA+GGG | + | chr5.1:2676751-2676770 | MS.gene21926:intron | 30.0% |
!!! | AGCTTTGTTTTCATTGAATC+TGG | + | chr5.1:2672481-2672500 | MS.gene21926:intron | 30.0% |
!!! | CACTTCCAATTTTGTTTTCA+CGG | - | chr5.1:2675578-2675597 | None:intergenic | 30.0% |
!!! | TGGGCTTATTTTTTAGCTTA+TGG | - | chr5.1:2673172-2673191 | None:intergenic | 30.0% |
!!! | TTTTATTTTCTTCAGGGATG+AGG | + | chr5.1:2676750-2676769 | MS.gene21926:intron | 30.0% |
AAAAATGATTCGTGCACGTT+TGG | + | chr5.1:2672986-2673005 | MS.gene21926:intron | 35.0% | |
AAATTTGGTCCAGAATGATC+TGG | + | chr5.1:2674107-2674126 | MS.gene21926:intron | 35.0% | |
AAGAATATGGCATCTAACAC+GGG | - | chr5.1:2676879-2676898 | None:intergenic | 35.0% | |
AAGGCTGAAACAGAAACAAA+AGG | + | chr5.1:2674987-2675006 | MS.gene21926:CDS | 35.0% | |
AATTTGGTCCAGAATGATCT+GGG | + | chr5.1:2674108-2674127 | MS.gene21926:intron | 35.0% | |
ACAATTTCATACCCCATAGA+TGG | - | chr5.1:2676806-2676825 | None:intergenic | 35.0% | |
ACTGACCTGAATATCAAACA+AGG | - | chr5.1:2676440-2676459 | None:intergenic | 35.0% | |
ACTTACAATTCCACCATCTA+TGG | + | chr5.1:2676790-2676809 | MS.gene21926:CDS | 35.0% | |
ACTTCAAATTCAAACGCAGA+TGG | - | chr5.1:2672448-2672467 | None:intergenic | 35.0% | |
AGCAAAGCAATCGAAGAAAA+AGG | + | chr5.1:2674818-2674837 | MS.gene21926:CDS | 35.0% | |
AGCAAGGAACACAAAAAAAC+TGG | - | chr5.1:2673536-2673555 | None:intergenic | 35.0% | |
AGGTGACAATAAGTTTGTCT+TGG | + | chr5.1:2674902-2674921 | MS.gene21926:CDS | 35.0% | |
ATACTTGAAATGACACTCGA+GGG | + | chr5.1:2672736-2672755 | MS.gene21926:intron | 35.0% | |
ATGAGTGGGAGTAAACAATA+AGG | - | chr5.1:2674597-2674616 | None:intergenic | 35.0% | |
ATTCCTAGGAATAATGTTCC+AGG | - | chr5.1:2674267-2674286 | None:intergenic | 35.0% | |
CATACCAAGTCGAAACTTAA+AGG | - | chr5.1:2676527-2676546 | None:intergenic | 35.0% | |
CATTCCTGATGCATGAAAAT+AGG | + | chr5.1:2674614-2674633 | MS.gene21926:intron | 35.0% | |
CCCTTTGTCTATATTTGTGT+TGG | + | chr5.1:2675737-2675756 | MS.gene21926:intron | 35.0% | |
CTAAAATTTCAGGCTACTCT+AGG | + | chr5.1:2673455-2673474 | MS.gene21926:intron | 35.0% | |
CTTACAATTCCACCATCTAT+GGG | + | chr5.1:2676791-2676810 | MS.gene21926:CDS | 35.0% | |
GATTTCCTATCAGAAGAAAC+TGG | - | chr5.1:2676418-2676437 | None:intergenic | 35.0% | |
GCACAAAATAACCAGAAAGA+TGG | - | chr5.1:2673646-2673665 | None:intergenic | 35.0% | |
GGAGTATACCACAAAATTCA+TGG | + | chr5.1:2676976-2676995 | MS.gene21926:CDS | 35.0% | |
GGATTGCAGAATGTAACATT+GGG | - | chr5.1:2674536-2674555 | None:intergenic | 35.0% | |
GGGTATACCGATAAAACTTA+GGG | - | chr5.1:2674573-2674592 | None:intergenic | 35.0% | |
GGTATACCGATAAAACTTAG+GGG | - | chr5.1:2674572-2674591 | None:intergenic | 35.0% | |
GGTTATAGAGGACATATCTA+TGG | + | chr5.1:2676271-2676290 | MS.gene21926:CDS | 35.0% | |
GTATACCGATAAAACTTAGG+GGG | - | chr5.1:2674571-2674590 | None:intergenic | 35.0% | |
TAAAGCTGTTGTAGAGATGT+TGG | - | chr5.1:2675603-2675622 | None:intergenic | 35.0% | |
TATACTTGAAATGACACTCG+AGG | + | chr5.1:2672735-2672754 | MS.gene21926:intron | 35.0% | |
TATTTATCGTTTGCAGGTGT+AGG | + | chr5.1:2676612-2676631 | MS.gene21926:intron | 35.0% | |
TCACGACTTCAAAAAAGGTA+AGG | - | chr5.1:2674752-2674771 | None:intergenic | 35.0% | |
TCATTCTGGACCAAATTTAC+TGG | - | chr5.1:2674105-2674124 | None:intergenic | 35.0% | |
TCCTCTATAACCAATCCATT+TGG | - | chr5.1:2676263-2676282 | None:intergenic | 35.0% | |
TGAAAACCCTTACTCATCAT+TGG | - | chr5.1:2675972-2675991 | None:intergenic | 35.0% | |
TGCCCTTTGAATCTTAAGTT+TGG | + | chr5.1:2673575-2673594 | MS.gene21926:CDS | 35.0% | |
TGGATTGCAGAATGTAACAT+TGG | - | chr5.1:2674537-2674556 | None:intergenic | 35.0% | |
TGGGTATACCGATAAAACTT+AGG | - | chr5.1:2674574-2674593 | None:intergenic | 35.0% | |
TGTTCGTTGTTATGCAGATA+TGG | + | chr5.1:2676939-2676958 | MS.gene21926:intron | 35.0% | |
TTACAATTCCACCATCTATG+GGG | + | chr5.1:2676792-2676811 | MS.gene21926:CDS | 35.0% | |
TTCCCAAAACTGATGAATAG+AGG | - | chr5.1:2675348-2675367 | None:intergenic | 35.0% | |
TTCCTAGGAATAATGTTCCA+GGG | - | chr5.1:2674266-2674285 | None:intergenic | 35.0% | |
TTGCTCCGTGAAAACAAAAT+TGG | + | chr5.1:2675570-2675589 | MS.gene21926:intron | 35.0% | |
TTGGAAAGTGAAGATGAAGA+TGG | + | chr5.1:2674921-2674940 | MS.gene21926:CDS | 35.0% | |
TTTATTCCCATGGGAATAAG+AGG | - | chr5.1:2674415-2674434 | None:intergenic | 35.0% | |
! | AACATCTTTTGCCTTCTTCT+TGG | - | chr5.1:2675042-2675061 | None:intergenic | 35.0% |
! | ACTCCTCTATTCATCAGTTT+TGG | + | chr5.1:2675342-2675361 | MS.gene21926:intron | 35.0% |
! | AGAGTAGCCTGAAATTTTAG+AGG | - | chr5.1:2673455-2673474 | None:intergenic | 35.0% |
! | ATGGGAATCTTTTATTCCCA+TGG | - | chr5.1:2674425-2674444 | None:intergenic | 35.0% |
! | CAAGTTGAAAGATCATGGTA+AGG | + | chr5.1:2675823-2675842 | MS.gene21926:CDS | 35.0% |
! | CTCCTCTATTCATCAGTTTT+GGG | + | chr5.1:2675343-2675362 | MS.gene21926:intron | 35.0% |
! | CTTTCCTATTTTCATGCATC+AGG | - | chr5.1:2674621-2674640 | None:intergenic | 35.0% |
! | TGGGAATCTTTTATTCCCAT+GGG | - | chr5.1:2674424-2674443 | None:intergenic | 35.0% |
! | TGTCTGGAGTTTGGTTAATT+GGG | + | chr5.1:2673361-2673380 | MS.gene21926:intron | 35.0% |
! | TTTTTCTTCGATTGCTTTGC+TGG | - | chr5.1:2674819-2674838 | None:intergenic | 35.0% |
!! | AAACACCCCCTAAGTTTTAT+CGG | + | chr5.1:2674563-2674582 | MS.gene21926:intron | 35.0% |
!! | AGATTTAGCTTTGTCTGAAG+TGG | - | chr5.1:2674958-2674977 | None:intergenic | 35.0% |
!! | GAATTGGTTTGATGGTTACT+TGG | + | chr5.1:2672901-2672920 | MS.gene21926:intron | 35.0% |
!! | TAGCCTGAAATTTTAGAGGA+CGG | - | chr5.1:2673451-2673470 | None:intergenic | 35.0% |
!! | TCCAAATGGATTGGTTATAG+AGG | + | chr5.1:2676259-2676278 | MS.gene21926:CDS | 35.0% |
!! | TTGTCGTTGAATTGGTTTGA+TGG | + | chr5.1:2672893-2672912 | MS.gene21926:intron | 35.0% |
!!! | AAACTGTTTTTGAATCCACG+TGG | - | chr5.1:2675155-2675174 | None:intergenic | 35.0% |
!!! | CTTTTTTGACGATAGCGATA+TGG | + | chr5.1:2673922-2673941 | MS.gene21926:CDS | 35.0% |
!!! | GAAACAGATTTTAGTGGGTT+TGG | + | chr5.1:2675476-2675495 | MS.gene21926:intron | 35.0% |
!!! | GGGTTTGGTTTTCAGTTTTT+TGG | + | chr5.1:2675491-2675510 | MS.gene21926:intron | 35.0% |
!!! | TCTTGTTTTTCTTCTCAACG+AGG | - | chr5.1:2676091-2676110 | None:intergenic | 35.0% |
AAAAAGACCAAAGAGGCTGA+AGG | + | chr5.1:2676122-2676141 | MS.gene21926:CDS | 40.0% | |
AAAAGTTCAAGCTGTCGATG+AGG | + | chr5.1:2675085-2675104 | MS.gene21926:CDS | 40.0% | |
AACCAGAAAGATGGATGCTT+CGG | - | chr5.1:2673637-2673656 | None:intergenic | 40.0% | |
AACGTGAGAACCTATCCAAA+TGG | + | chr5.1:2676245-2676264 | MS.gene21926:CDS | 40.0% | |
AACTGGGAAATCCAAGAAGA+AGG | + | chr5.1:2675028-2675047 | MS.gene21926:CDS | 40.0% | |
AAGAGCTGATCTTGGAAAGA+AGG | + | chr5.1:2676310-2676329 | MS.gene21926:CDS | 40.0% | |
AATGTCTCTCATGCAAAGGA+TGG | + | chr5.1:2675929-2675948 | MS.gene21926:CDS | 40.0% | |
ACAAAATACCTCCACTACTC+CGG | - | chr5.1:2673970-2673989 | None:intergenic | 40.0% | |
ACTAAAAACCAAGGCCCATT+TGG | - | chr5.1:2673196-2673215 | None:intergenic | 40.0% | |
AGATATGGTGACAAACGTGT+TGG | + | chr5.1:2676954-2676973 | MS.gene21926:intron | 40.0% | |
AGCTAAATCTGAGTCTCAGA+AGG | + | chr5.1:2674968-2674987 | MS.gene21926:CDS | 40.0% | |
AGTGGGAGTAAACAATAAGG+TGG | - | chr5.1:2674594-2674613 | None:intergenic | 40.0% | |
ATATCTATGGGCAAACCAGA+TGG | + | chr5.1:2676284-2676303 | MS.gene21926:CDS | 40.0% | |
ATGAGAGACATTGTTCTGGT+TGG | - | chr5.1:2675921-2675940 | None:intergenic | 40.0% | |
ATGCAAAGGATGGAGATGAT+GGG | + | chr5.1:2675939-2675958 | MS.gene21926:CDS | 40.0% | |
ATTTCATACCCCATAGATGG+TGG | - | chr5.1:2676803-2676822 | None:intergenic | 40.0% | |
CAAAAGTGATTCATTGGGAG+AGG | + | chr5.1:2673838-2673857 | MS.gene21926:intron | 40.0% | |
CAGGTCAGTGTTAGATATAC+CGG | + | chr5.1:2676451-2676470 | MS.gene21926:intron | 40.0% | |
CTCGATCACGACTTCAAAAA+AGG | - | chr5.1:2674757-2674776 | None:intergenic | 40.0% | |
GAACAATGTCTCTCATGCAA+AGG | + | chr5.1:2675925-2675944 | MS.gene21926:CDS | 40.0% | |
GAGAACCTATCCAAATGGAT+TGG | + | chr5.1:2676250-2676269 | MS.gene21926:CDS | 40.0% | |
GATATGGTGACAAACGTGTT+GGG | + | chr5.1:2676955-2676974 | MS.gene21926:intron | 40.0% | |
GTGGGAGTAAACAATAAGGT+GGG | - | chr5.1:2674593-2674612 | None:intergenic | 40.0% | |
GTTGAAAGATCATGGTAAGG+AGG | + | chr5.1:2675826-2675845 | MS.gene21926:CDS | 40.0% | |
TACTTGAAATGACACTCGAG+GGG | + | chr5.1:2672737-2672756 | MS.gene21926:intron | 40.0% | |
TAGTGTGAGTGGGAAGTTAT+AGG | + | chr5.1:2674383-2674402 | MS.gene21926:intron | 40.0% | |
TCCACATCGTCAGTACTATA+CGG | - | chr5.1:2672367-2672386 | None:intergenic | 40.0% | |
TGAAACAAACATGGGAACGT+AGG | + | chr5.1:2674507-2674526 | MS.gene21926:intron | 40.0% | |
TGGAAAAGTCATGTGTACCT+AGG | + | chr5.1:2674467-2674486 | MS.gene21926:intron | 40.0% | |
TGGTTACCTCTTATTCCCAT+GGG | + | chr5.1:2674406-2674425 | MS.gene21926:intron | 40.0% | |
TTCATGCATCAGGAATGAGT+GGG | - | chr5.1:2674611-2674630 | None:intergenic | 40.0% | |
TTCCCTGGAACATTATTCCT+AGG | + | chr5.1:2674261-2674280 | MS.gene21926:intron | 40.0% | |
TTGCATGAGAGACATTGTTC+TGG | - | chr5.1:2675925-2675944 | None:intergenic | 40.0% | |
TTGTACATTCCTTCTGCACA+AGG | + | chr5.1:2672585-2672604 | MS.gene21926:intron | 40.0% | |
TTGTCACCTCTAATGACAAC+TGG | - | chr5.1:2674891-2674910 | None:intergenic | 40.0% | |
TTTCATGCATCAGGAATGAG+TGG | - | chr5.1:2674612-2674631 | None:intergenic | 40.0% | |
! | ACTTTGGGCCTGTTTGATTT+AGG | + | chr5.1:2675182-2675201 | MS.gene21926:intron | 40.0% |
! | ATAGGGGTGTGTTTGTTTCA+AGG | + | chr5.1:2674211-2674230 | MS.gene21926:intron | 40.0% |
! | CTTTGTCTGAAGTGGAAATC+GGG | - | chr5.1:2674950-2674969 | None:intergenic | 40.0% |
! | GCTGGATTATCTCCATTTTC+AGG | - | chr5.1:2674801-2674820 | None:intergenic | 40.0% |
! | GCTTTGTCTGAAGTGGAAAT+CGG | - | chr5.1:2674951-2674970 | None:intergenic | 40.0% |
! | GTGTCTGGAGTTTGGTTAAT+TGG | + | chr5.1:2673360-2673379 | MS.gene21926:intron | 40.0% |
! | TAAGTTTGGTGAGGATGACT+TGG | + | chr5.1:2673589-2673608 | MS.gene21926:CDS | 40.0% |
! | TTGATGGTTACTTGGCACTT+CGG | + | chr5.1:2672909-2672928 | MS.gene21926:intron | 40.0% |
!! | AGCCTGAAATTTTAGAGGAC+GGG | - | chr5.1:2673450-2673469 | None:intergenic | 40.0% |
!! | ATTTTCAGGCTGATTGTCGT+CGG | - | chr5.1:2674787-2674806 | None:intergenic | 40.0% |
!! | TATAGTACTGACGATGTGGA+AGG | + | chr5.1:2672367-2672386 | MS.gene21926:CDS | 40.0% |
!! | TTCCCGTCCTCTAAAATTTC+AGG | + | chr5.1:2673445-2673464 | MS.gene21926:intron | 40.0% |
!!! | CTTAGGGGGTGTTTGTTTTA+TGG | - | chr5.1:2674557-2674576 | None:intergenic | 40.0% |
!!! | CTTTTTTGAAGTCGTGATCG+AGG | + | chr5.1:2674755-2674774 | MS.gene21926:intron | 40.0% |
AAAACCAAGGCCCATTTGGA+TGG | - | chr5.1:2673192-2673211 | None:intergenic | 45.0% | |
AAACCAAGGCCCATTTGGAT+GGG | - | chr5.1:2673191-2673210 | None:intergenic | 45.0% | |
ACCAGAAAGATGGATGCTTC+GGG | - | chr5.1:2673636-2673655 | None:intergenic | 45.0% | |
ACCGGCAAGCTACAAAAAGA+TGG | + | chr5.1:2676469-2676488 | MS.gene21926:CDS | 45.0% | |
AGCGGATGTATGCTAGATGA+AGG | - | chr5.1:2673231-2673250 | None:intergenic | 45.0% | |
AGGTGTAGGACAAGTCATCA+AGG | + | chr5.1:2676626-2676645 | MS.gene21926:intron | 45.0% | |
CAGCTTCCAGTTGTCATTAG+AGG | + | chr5.1:2674882-2674901 | MS.gene21926:CDS | 45.0% | |
CATGCAAAGGATGGAGATGA+TGG | + | chr5.1:2675938-2675957 | MS.gene21926:CDS | 45.0% | |
CCGGCAAGCTACAAAAAGAT+GGG | + | chr5.1:2676470-2676489 | MS.gene21926:CDS | 45.0% | |
CTTCACGTCACTCAGGTTAT+TGG | + | chr5.1:2672394-2672413 | MS.gene21926:intron | 45.0% | |
GACACTTCTGATTGAAGGTG+CGG | - | chr5.1:2672616-2672635 | None:intergenic | 45.0% | |
GACGACAATCAGCCTGAAAA+TGG | + | chr5.1:2674786-2674805 | MS.gene21926:CDS | 45.0% | |
GATGGCAAAAGAGCTGATCT+TGG | + | chr5.1:2676302-2676321 | MS.gene21926:CDS | 45.0% | |
GCTCACTTGAAAGAGAAACC+CGG | + | chr5.1:2674849-2674868 | MS.gene21926:CDS | 45.0% | |
GGATAGGTTCTCACGTTAGA+TGG | - | chr5.1:2676242-2676261 | None:intergenic | 45.0% | |
GGTGTAGGACAAGTCATCAA+GGG | + | chr5.1:2676627-2676646 | MS.gene21926:intron | 45.0% | |
GTAACACACCCAGATCATTC+TGG | - | chr5.1:2674119-2674138 | None:intergenic | 45.0% | |
GTGGTTACCTCTTATTCCCA+TGG | + | chr5.1:2674405-2674424 | MS.gene21926:intron | 45.0% | |
GTGTAGGACAAGTCATCAAG+GGG | + | chr5.1:2676628-2676647 | MS.gene21926:CDS | 45.0% | |
TCGTCAGTACTATACGGAAC+CGG | - | chr5.1:2672361-2672380 | None:intergenic | 45.0% | |
TGAAGTGAAACCTGGCAATC+CGG | + | chr5.1:2672339-2672358 | MS.gene21926:CDS | 45.0% | |
TGATTCGTGCACGTTTGGAT+TGG | + | chr5.1:2672991-2673010 | MS.gene21926:intron | 45.0% | |
TGTGAGTGGGAAGTTATAGG+TGG | + | chr5.1:2674386-2674405 | MS.gene21926:intron | 45.0% | |
TGTGCCAGATGAAAAGTCTG+AGG | + | chr5.1:2675880-2675899 | MS.gene21926:CDS | 45.0% | |
TTCCAGGGAATGTTATACCC+AGG | - | chr5.1:2674251-2674270 | None:intergenic | 45.0% | |
TTTCTTCAGGGATGAGGGTT+GGG | + | chr5.1:2676756-2676775 | MS.gene21926:intron | 45.0% | |
! | ACCTCCTCAGACTTTTCATC+TGG | - | chr5.1:2675887-2675906 | None:intergenic | 45.0% |
! | AGAATGCTTTTCTCCGTCGA+TGG | - | chr5.1:2673488-2673507 | None:intergenic | 45.0% |
! | AGATCAGCTCTTTTGCCATC+TGG | - | chr5.1:2676302-2676321 | None:intergenic | 45.0% |
! | GCACCCTTTAAGTTTCGACT+TGG | + | chr5.1:2676520-2676539 | MS.gene21926:CDS | 45.0% |
! | GCACCTTCAATCAGAAGTGT+CGG | + | chr5.1:2672615-2672634 | MS.gene21926:intron | 45.0% |
! | TCAAACAGGCCCAAAGTATC+TGG | - | chr5.1:2675179-2675198 | None:intergenic | 45.0% |
! | TGGAAGCTGAGAACTTTTGC+CGG | - | chr5.1:2674871-2674890 | None:intergenic | 45.0% |
! | TTAGATGGCTTGGCTTCAGT+TGG | - | chr5.1:2676227-2676246 | None:intergenic | 45.0% |
! | TTTGCTTGCATTGGCACTTG+AGG | + | chr5.1:2673338-2673357 | MS.gene21926:intron | 45.0% |
! | TTTTCTTCAGGGATGAGGGT+TGG | + | chr5.1:2676755-2676774 | MS.gene21926:intron | 45.0% |
!! | CCCATCTTTTTGTAGCTTGC+CGG | - | chr5.1:2676473-2676492 | None:intergenic | 45.0% |
!! | GGAGGAAAGTGCTCATGTAA+AGG | + | chr5.1:2675844-2675863 | MS.gene21926:CDS | 45.0% |
!! | TCCGTATAGTACTGACGATG+TGG | + | chr5.1:2672363-2672382 | MS.gene21926:CDS | 45.0% |
!! | TTTTCAGGCTGATTGTCGTC+GGG | - | chr5.1:2674786-2674805 | None:intergenic | 45.0% |
AGCATTCTTCAGTGCGCTTC+TGG | + | chr5.1:2673500-2673519 | MS.gene21926:CDS | 50.0% | |
AGCTTCTCCTTCAGCCTCTT+TGG | - | chr5.1:2676132-2676151 | None:intergenic | 50.0% | |
AGGAAAGCTTCACGTCACTC+AGG | + | chr5.1:2672387-2672406 | MS.gene21926:CDS | 50.0% | |
AGGACAAGTCATCAAGGGGT+GGG | + | chr5.1:2676632-2676651 | MS.gene21926:CDS | 50.0% | |
AGGATGAGCAGCTGCAAGAT+GGG | + | chr5.1:2675105-2675124 | MS.gene21926:CDS | 50.0% | |
GATCTGGGTGTGTTACATGC+CGG | + | chr5.1:2674123-2674142 | MS.gene21926:intron | 50.0% | |
GATTCATTGGGAGAGGACGT+GGG | + | chr5.1:2673845-2673864 | MS.gene21926:CDS | 50.0% | |
GCCAGATGAAAAGTCTGAGG+AGG | + | chr5.1:2675883-2675902 | MS.gene21926:CDS | 50.0% | |
GGTTCTCACGTTAGATGGCT+TGG | - | chr5.1:2676237-2676256 | None:intergenic | 50.0% | |
GTCCTGGGTATAACATTCCC+TGG | + | chr5.1:2674246-2674265 | MS.gene21926:intron | 50.0% | |
GTGTTCCTTGCTGCCAAACA+AGG | + | chr5.1:2673544-2673563 | MS.gene21926:CDS | 50.0% | |
TAGGACAAGTCATCAAGGGG+TGG | + | chr5.1:2676631-2676650 | MS.gene21926:CDS | 50.0% | |
TGATTCATTGGGAGAGGACG+TGG | + | chr5.1:2673844-2673863 | MS.gene21926:CDS | 50.0% | |
TGTACACATCTTCGCCAGTC+CGG | + | chr5.1:2673948-2673967 | MS.gene21926:CDS | 50.0% | |
TTCTTCAGGGATGAGGGTTG+GGG | + | chr5.1:2676757-2676776 | MS.gene21926:intron | 50.0% | |
TTTCAGGCTACTCTAGGCGT+TGG | + | chr5.1:2673461-2673480 | MS.gene21926:intron | 50.0% | |
! | CACTTGAGGTGTCTGGAGTT+TGG | + | chr5.1:2673352-2673371 | MS.gene21926:intron | 50.0% |
! | CTCAACCTTGTTTGGCAGCA+AGG | - | chr5.1:2673552-2673571 | None:intergenic | 50.0% |
! | GCACCGACACTTCTGATTGA+AGG | - | chr5.1:2672621-2672640 | None:intergenic | 50.0% |
! | GGAAGCTGAGAACTTTTGCC+GGG | - | chr5.1:2674870-2674889 | None:intergenic | 50.0% |
! | GTTTGGTGAGGATGACTTGG+TGG | + | chr5.1:2673592-2673611 | MS.gene21926:CDS | 50.0% |
! | TCCCGAAGCATCCATCTTTC+TGG | + | chr5.1:2673632-2673651 | MS.gene21926:CDS | 50.0% |
! | TTCTGATTGAAGGTGCGGTG+CGG | - | chr5.1:2672611-2672630 | None:intergenic | 50.0% |
!! | GGATGACTTGGTGGCATTCT+CGG | + | chr5.1:2673601-2673620 | MS.gene21926:CDS | 50.0% |
!! | GTTGAGTTGGTTGGCGTTGA+AGG | + | chr5.1:2677011-2677030 | MS.gene21926:CDS | 50.0% |
AAGCCCATCCAAATGGGCCT+TGG | + | chr5.1:2673185-2673204 | MS.gene21926:intron | 55.0% | |
ATACCTCCACTACTCCGGAC+TGG | - | chr5.1:2673965-2673984 | None:intergenic | 55.0% | |
CTATACGGAACCGGATTGCC+AGG | - | chr5.1:2672352-2672371 | None:intergenic | 55.0% | |
GAGGATGAGCAGCTGCAAGA+TGG | + | chr5.1:2675104-2675123 | MS.gene21926:CDS | 55.0% | |
GGGCACGTCTCAACCTTGTT+TGG | - | chr5.1:2673560-2673579 | None:intergenic | 55.0% | |
GTCATCAAGGGGTGGGATGT+TGG | + | chr5.1:2676639-2676658 | MS.gene21926:CDS | 55.0% | |
TCTCTCGTGTCGTCGTCATC+TGG | - | chr5.1:2673668-2673687 | None:intergenic | 55.0% | |
! | GCATTGGCACTTGAGGTGTC+TGG | + | chr5.1:2673345-2673364 | MS.gene21926:intron | 55.0% |
! | TTGGTGGCATTCTCGGTCGT+CGG | + | chr5.1:2673608-2673627 | MS.gene21926:CDS | 55.0% |
!! | TCTAGGCGTTGGTCCATCGA+CGG | + | chr5.1:2673472-2673491 | MS.gene21926:CDS | 55.0% |
GGGTGGGATGTTGGCGTCAA+TGG | + | chr5.1:2676648-2676667 | MS.gene21926:CDS | 60.0% | |
TCTTCGCCAGTCCGGAGTAG+TGG | + | chr5.1:2673956-2673975 | MS.gene21926:CDS | 60.0% | |
TGGGAGAGGACGTGGGAACT+GGG | + | chr5.1:2673852-2673871 | MS.gene21926:CDS | 60.0% | |
TTGGGAGAGGACGTGGGAAC+TGG | + | chr5.1:2673851-2673870 | MS.gene21926:CDS | 60.0% | |
GGACGTGGGAACTGGGTCAG+AGG | + | chr5.1:2673859-2673878 | MS.gene21926:CDS | 65.0% | |
TCGCCAGTCCGGAGTAGTGG+AGG | + | chr5.1:2673959-2673978 | MS.gene21926:CDS | 65.0% | |
! | GCGGTGCGGCCTTGTGCAGA+AGG | - | chr5.1:2672597-2672616 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 2672335 | 2677040 | 2672335 | ID=MS.gene21926 |
chr5.1 | mRNA | 2672335 | 2677040 | 2672335 | ID=MS.gene21926.t1;Parent=MS.gene21926 |
chr5.1 | exon | 2672335 | 2672408 | 2672335 | ID=MS.gene21926.t1.exon1;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2672335 | 2672408 | 2672335 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2673467 | 2673699 | 2673467 | ID=MS.gene21926.t1.exon2;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2673467 | 2673699 | 2673467 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2673844 | 2673980 | 2673844 | ID=MS.gene21926.t1.exon3;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2673844 | 2673980 | 2673844 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2674766 | 2675126 | 2674766 | ID=MS.gene21926.t1.exon4;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2674766 | 2675126 | 2674766 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2675802 | 2675978 | 2675802 | ID=MS.gene21926.t1.exon5;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2675802 | 2675978 | 2675802 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2676085 | 2676331 | 2676085 | ID=MS.gene21926.t1.exon6;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2676085 | 2676331 | 2676085 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2676454 | 2676541 | 2676454 | ID=MS.gene21926.t1.exon7;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2676454 | 2676541 | 2676454 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2676628 | 2676669 | 2676628 | ID=MS.gene21926.t1.exon8;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2676628 | 2676669 | 2676628 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2676765 | 2676813 | 2676765 | ID=MS.gene21926.t1.exon9;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2676765 | 2676813 | 2676765 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
chr5.1 | exon | 2676956 | 2677040 | 2676956 | ID=MS.gene21926.t1.exon10;Parent=MS.gene21926.t1 |
chr5.1 | CDS | 2676956 | 2677040 | 2676956 | ID=cds.MS.gene21926.t1;Parent=MS.gene21926.t1 |
Gene Sequence |
Protein sequence |