AlfalfaGEDB | MS.gene057777

M. sativa cultivar XinJiangDaYe / MS.gene057777

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057777.t1	AES89295.1	91.4	93	8	0	1	93	1	93	3.60E-41	177.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057777.t1	P33079	72.0	93	26	0	1	93	1	93	4.8e-34	144.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057777.t1	G7JL20	91.4	93	8	0	1	93	1	93	2.6e-41	177.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50675	MS.gene057777	PPI
MS.gene003591	MS.gene057777	PPI
MS.gene062979	MS.gene057777	PPI
MS.gene003590	MS.gene057777	PPI
MS.gene045368	MS.gene057777	PPI
MS.gene062943	MS.gene057777	PPI
MS.gene057777	MS.gene79886	PPI
MS.gene057777	MS.gene014671	PPI
MS.gene014668	MS.gene057777	PPI
MS.gene003608	MS.gene057777	PPI
MS.gene057777	MS.gene75672	PPI
MS.gene40326	MS.gene057777	PPI
MS.gene057777	MS.gene062974	PPI
MS.gene77526	MS.gene057777	PPI
MS.gene77527	MS.gene057777	PPI
MS.gene50654	MS.gene057777	PPI
MS.gene014669	MS.gene057777	PPI
MS.gene50676	MS.gene057777	PPI
MS.gene003614	MS.gene057777	PPI
MS.gene057818	MS.gene057777	PPI
MS.gene50652	MS.gene057777	PPI
MS.gene50766	MS.gene057777	PPI
MS.gene75677	MS.gene057777	PPI
MS.gene79889	MS.gene057777	PPI
MS.gene50677	MS.gene057777	PPI
MS.gene003625	MS.gene057777	PPI
MS.gene68165	MS.gene057777	PPI
MS.gene01764	MS.gene057777	PPI
MS.gene045361	MS.gene057777	PPI
MS.gene057777	MS.gene50684	PPI
MS.gene50763	MS.gene057777	PPI
MS.gene40325	MS.gene057777	PPI
MS.gene79885	MS.gene057777	PPI
MS.gene057777	MS.gene50765	PPI
MS.gene01358	MS.gene057777	PPI
MS.gene50659	MS.gene057777	PPI
MS.gene75675	MS.gene057777	PPI
MS.gene003583	MS.gene057777	PPI
MS.gene79888	MS.gene057777	PPI
MS.gene057790	MS.gene057777	PPI
MS.gene062952	MS.gene057777	PPI
MS.gene045363	MS.gene057777	PPI
MS.gene003624	MS.gene057777	PPI
MS.gene031199	MS.gene057777	PPI
MS.gene75314	MS.gene057777	PPI
MS.gene057777	MS.gene045367	PPI
MS.gene057797	MS.gene057777	PPI
MS.gene23370	MS.gene057777	PPI
MS.gene77529	MS.gene057777	PPI
MS.gene68761	MS.gene057777	PPI
MS.gene014667	MS.gene057777	PPI
MS.gene68760	MS.gene057777	PPI
MS.gene003594	MS.gene057777	PPI
MS.gene003596	MS.gene057777	PPI
MS.gene75676	MS.gene057777	PPI
MS.gene50665	MS.gene057777	PPI
MS.gene68759	MS.gene057777	PPI
MS.gene003586	MS.gene057777	PPI
MS.gene057777	MS.gene057808	PPI
MS.gene057777	MS.gene002380	PPI
MS.gene057778	MS.gene057777	PPI
MS.gene062988	MS.gene057777	PPI
MS.gene75673	MS.gene057777	PPI
MS.gene045366	MS.gene057777	PPI
MS.gene062963	MS.gene057777	PPI
MS.gene77528	MS.gene057777	PPI
MS.gene68164	MS.gene057777	PPI
MS.gene031198	MS.gene057777	PPI
MS.gene75674	MS.gene057777	PPI
MS.gene057777	MS.gene68163	PPI
MS.gene031200	MS.gene057777	PPI
MS.gene045365	MS.gene057777	PPI
MS.gene057777	MS.gene75315	PPI
MS.gene045364	MS.gene057777	PPI
MS.gene003602	MS.gene057777	PPI
MS.gene23372	MS.gene057777	PPI
MS.gene75316	MS.gene057777	PPI
MS.gene003577	MS.gene057777	PPI
MS.gene77524	MS.gene057777	PPI
MS.gene062984	MS.gene057777	PPI
MS.gene23371	MS.gene057777	PPI
MS.gene031201	MS.gene057777	PPI
MS.gene057777	MS.gene75678	PPI
MS.gene062951	MS.gene057777	PPI
MS.gene045362	MS.gene057777	PPI
MS.gene77523	MS.gene057777	PPI
MS.gene003587	MS.gene057777	PPI
MS.gene057777	MS.gene50764	PPI
MS.gene063112	MS.gene057777	PPI
MS.gene79891	MS.gene057777	PPI
MS.gene79890	MS.gene057777	PPI
MS.gene003615	MS.gene057777	PPI
MS.gene79887	MS.gene057777	PPI
MS.gene062973	MS.gene057777	PPI
MS.gene047517	MS.gene057777	PPI
MS.gene045360	MS.gene057777	PPI
MS.gene057777	MS.gene014670	PPI
MS.gene003627	MS.gene057777	PPI
MS.gene057801	MS.gene057777	PPI
MS.gene68162	MS.gene057777	PPI
MS.gene014223	MS.gene057777	PPI
MS.gene014222	MS.gene057777	PPI
MS.gene50687	MS.gene057777	PPI
MS.gene40327	MS.gene057777	PPI
MS.gene057777	MS.gene75679	PPI
MS.gene057795	MS.gene057777	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057777.t1	MTR_4g072220	91.398	93	8	0	1	93	1	93	8.92e-60	177
MS.gene057777.t1	MTR_4g072300	90.110	91	9	0	1	91	1	91	8.07e-58	172
MS.gene057777.t1	MTR_4g072890	89.011	91	10	0	1	91	1	91	2.50e-57	171
MS.gene057777.t1	MTR_4g072260	87.097	93	12	0	1	93	1	93	4.36e-57	171
MS.gene057777.t1	MTR_4g072240	89.011	91	10	0	1	91	1	91	1.03e-56	169
MS.gene057777.t1	MTR_4g072870	83.516	91	15	0	1	91	1	91	9.87e-53	159
MS.gene057777.t1	MTR_4g072310	65.591	93	32	0	1	93	1	93	1.13e-42	134
MS.gene057777.t1	MTR_3g110038	69.892	93	27	1	1	93	1	92	5.26e-42	132
MS.gene057777.t1	MTR_4g072530	65.934	91	30	1	1	91	1	90	1.01e-41	132
MS.gene057777.t1	MTR_4g072370	67.033	91	27	1	1	91	1	88	2.04e-41	131
MS.gene057777.t1	MTR_3g084240	66.667	93	30	1	1	93	1	92	2.61e-41	130
MS.gene057777.t1	MTR_4g072500	65.591	93	31	1	1	93	1	92	2.81e-41	130
MS.gene057777.t1	MTR_4g072640	66.304	92	30	1	1	92	1	91	3.39e-41	130
MS.gene057777.t1	MTR_3g084150	66.667	93	30	1	1	93	1	92	3.51e-41	130
MS.gene057777.t1	MTR_4g072280	81.333	75	14	0	1	75	1	75	4.22e-41	130
MS.gene057777.t1	MTR_3g084170	66.667	93	30	1	1	93	1	92	1.10e-40	129
MS.gene057777.t1	MTR_4g072570	65.591	93	31	1	1	93	1	92	1.16e-40	129
MS.gene057777.t1	MTR_4g072330	67.033	91	27	1	1	91	1	88	1.66e-40	129
MS.gene057777.t1	MTR_3g110042	68.889	90	27	1	1	90	1	89	2.01e-40	129
MS.gene057777.t1	MTR_3g084180	65.591	93	31	1	1	93	1	92	2.16e-40	128
MS.gene057777.t1	MTR_4g072580	67.033	91	24	1	1	91	1	85	4.21e-40	127
MS.gene057777.t1	MTR_4g072880	62.366	93	35	0	1	93	1	93	6.98e-40	127
MS.gene057777.t1	MTR_4g072230	63.441	93	32	1	1	93	1	91	9.44e-40	127
MS.gene057777.t1	MTR_8g461410	64.516	93	32	1	1	93	1	92	1.02e-39	127
MS.gene057777.t1	MTR_3g117630	64.444	90	32	0	4	93	3	92	1.12e-39	127
MS.gene057777.t1	MTR_4g072830	67.033	91	27	1	1	91	1	88	1.25e-39	126
MS.gene057777.t1	MTR_4g072250	65.934	91	30	1	1	91	1	90	1.41e-39	126
MS.gene057777.t1	MTR_3g084220	64.516	93	32	1	1	93	1	92	3.71e-39	125
MS.gene057777.t1	MTR_3g084250	66.667	93	30	1	1	93	1	92	5.81e-39	125
MS.gene057777.t1	MTR_3g110032	62.366	93	35	0	1	93	1	93	6.39e-39	125
MS.gene057777.t1	MTR_4g050700	63.441	93	34	0	1	93	1	93	6.98e-39	125
MS.gene057777.t1	MTR_2g012410	63.441	93	34	0	1	93	1	93	6.98e-39	125
MS.gene057777.t1	MTR_4g072630	67.033	91	25	1	1	91	1	86	1.38e-38	124
MS.gene057777.t1	MTR_4g072600	65.934	91	25	1	1	91	1	85	2.07e-38	123
MS.gene057777.t1	MTR_4g072740	65.934	91	25	1	1	91	1	85	3.19e-38	123
MS.gene057777.t1	MTR_4g072490	65.934	91	25	1	1	91	1	85	6.23e-38	122
MS.gene057777.t1	MTR_4g072480	62.366	93	34	1	1	93	1	92	6.35e-38	122
MS.gene057777.t1	MTR_4g072860	62.366	93	35	0	1	93	1	93	9.59e-38	122
MS.gene057777.t1	MTR_3g084260	62.637	91	34	0	1	91	1	91	1.16e-37	122
MS.gene057777.t1	MTR_4g072270	61.290	93	36	0	1	93	1	93	2.04e-37	121
MS.gene057777.t1	MTR_4g072850	64.894	94	32	1	1	93	1	94	2.22e-37	121
MS.gene057777.t1	MTR_4g072730	60.440	91	35	1	1	91	1	90	2.95e-37	120
MS.gene057777.t1	MTR_4g072680	62.366	93	34	1	1	93	1	92	3.71e-37	120
MS.gene057777.t1	MTR_4g072470	64.835	91	26	1	1	91	1	85	6.52e-37	119
MS.gene057777.t1	MTR_4g072820	65.556	90	25	1	1	90	1	84	6.93e-37	119
MS.gene057777.t1	MTR_4g072620	59.140	93	37	1	1	93	1	92	1.10e-36	119
MS.gene057777.t1	MTR_4g072610	62.637	91	27	1	1	91	1	84	2.29e-36	118
MS.gene057777.t1	MTR_4g072460	61.290	93	35	1	1	93	1	92	4.62e-36	117
MS.gene057777.t1	MTR_3g084190	69.892	93	27	1	1	93	1	92	8.34e-36	117
MS.gene057777.t1	MTR_3g084160	68.817	93	28	1	1	93	1	92	2.55e-35	115
MS.gene057777.t1	MTR_4g072650	62.637	91	27	1	1	91	1	84	2.85e-35	115
MS.gene057777.t1	MTR_3g084210	66.667	93	30	1	1	93	1	92	5.38e-35	115
MS.gene057777.t1	MTR_4g072540	62.637	91	29	1	1	91	1	86	5.51e-35	114
MS.gene057777.t1	MTR_8g461420	66.667	93	30	1	1	93	1	92	5.62e-35	115
MS.gene057777.t1	MTR_4g072940	70.833	72	21	0	22	93	53	124	5.97e-35	115
MS.gene057777.t1	MTR_3g084230	66.667	93	30	1	1	93	1	92	1.59e-34	114
MS.gene057777.t1	MTR_4g072660	59.140	93	32	1	1	93	1	87	2.46e-34	113
MS.gene057777.t1	MTR_4g072670	61.538	91	30	1	1	91	1	86	2.67e-34	113
MS.gene057777.t1	MTR_4g072510	62.637	91	29	1	1	91	1	86	2.98e-34	113
MS.gene057777.t1	MTR_4g072465	59.341	91	32	1	1	91	1	86	8.08e-34	112
MS.gene057777.t1	MTR_3g110045	70.833	72	21	0	22	93	80	151	1.01e-33	114
MS.gene057777.t1	MTR_4g072720	60.440	91	31	1	1	91	1	86	3.51e-33	110
MS.gene057777.t1	MTR_5g008350	67.500	80	20	1	1	80	1	74	3.66e-33	110
MS.gene057777.t1	MTR_4g072590	68.293	82	26	0	10	91	4	85	6.81e-33	109
MS.gene057777.t1	MTR_4g072380	63.636	88	27	1	1	88	1	83	1.55e-32	108
MS.gene057777.t1	MTR_5g008360	60.241	83	33	0	11	93	1	83	2.45e-32	108
MS.gene057777.t1	MTR_4g072450	68.293	82	26	0	10	91	4	85	4.16e-32	107
MS.gene057777.t1	MTR_4g072690	67.073	82	27	0	10	91	4	85	1.16e-31	106
MS.gene057777.t1	MTR_3g084200	67.123	73	23	1	1	73	1	72	2.58e-31	106
MS.gene057777.t1	MTR_5g008370	70.149	67	20	0	25	91	24	90	7.19e-31	106
MS.gene057777.t1	MTR_4g072910	58.824	85	34	1	7	91	17	100	1.13e-30	104
MS.gene057777.t1	MTR_4g072550	64.384	73	26	0	21	93	31	103	1.34e-30	104
MS.gene057777.t1	MTR_4g072770	68.182	66	21	0	26	91	15	80	1.24e-29	101
MS.gene057777.t1	MTR_4g072980	52.174	92	42	2	1	90	1	92	1.44e-29	101
MS.gene057777.t1	MTR_3g117640	65.672	67	22	1	25	90	33	99	5.75e-29	100
MS.gene057777.t1	MTR_4g072560	60.606	66	25	1	26	90	32	97	2.30e-27	95.9
MS.gene057777.t1	MTR_4g072750	64.000	75	24	2	1	73	1	74	6.81e-27	94.4
MS.gene057777.t1	MTR_4g072930	45.098	102	45	2	1	91	9	110	1.84e-26	94.4
MS.gene057777.t1	MTR_4g072290	48.387	93	34	1	1	93	1	79	1.20e-24	88.6
MS.gene057777.t1	MTR_3g110035	60.606	66	26	0	28	93	73	138	7.45e-23	85.9
MS.gene057777.t1	MTR_3g117610	56.923	65	27	1	24	88	43	106	2.26e-22	84.0
MS.gene057777.t1	MTR_3g113310	52.239	67	31	1	24	90	40	105	1.31e-21	81.6
MS.gene057777.t1	MTR_4g072190	48.193	83	39	2	8	90	21	99	3.74e-21	80.5
MS.gene057777.t1	MTR_6g077850	49.254	67	34	0	25	91	33	99	4.75e-21	80.1
MS.gene057777.t1	MTR_5g021820	47.619	84	40	3	10	90	21	103	5.76e-20	77.4
MS.gene057777.t1	MTR_8g076040	48.810	84	39	2	8	88	20	102	8.02e-20	77.0
MS.gene057777.t1	MTR_4g124750	50.000	76	36	2	4	78	46	120	8.40e-19	75.9
MS.gene057777.t1	MTR_2g043960	62.963	54	19	1	25	78	75	127	1.21e-18	75.9
MS.gene057777.t1	MTR_8g461400	45.161	93	24	2	1	93	1	66	1.46e-18	72.8
MS.gene057777.t1	MTR_4g025830	50.000	72	32	2	23	91	76	146	1.59e-18	75.5
MS.gene057777.t1	MTR_4g072160	46.250	80	42	1	4	83	15	93	2.66e-18	74.3
MS.gene057777.t1	MTR_0388s0020	43.182	88	45	3	7	91	57	142	8.50e-18	73.2
MS.gene057777.t1	MTR_3g092220	44.156	77	40	2	9	83	16	91	1.28e-17	71.6
MS.gene057777.t1	MTR_7g118010	53.968	63	26	2	26	86	23	84	3.10e-17	70.5
MS.gene057777.t1	MTR_4g005310	48.052	77	33	2	17	86	47	123	3.61e-17	71.6
MS.gene057777.t1	MTR_4g072840	47.778	90	16	3	1	90	1	59	3.49e-16	66.6
MS.gene057777.t1	MTR_1g094750	44.444	81	41	2	9	86	30	109	3.58e-16	68.2
MS.gene057777.t1	MTR_8g026730	47.059	68	33	2	26	91	27	93	4.75e-16	67.8
MS.gene057777.t1	MTR_1g009150	49.254	67	33	1	17	83	62	127	1.92e-15	67.8
MS.gene057777.t1	MTR_1g024085	45.455	77	30	2	4	80	26	90	2.48e-15	66.6
MS.gene057777.t1	MTR_1g061570	53.571	56	25	1	25	80	18	72	5.06e-15	65.5
MS.gene057777.t1	MTR_3g097120	41.463	82	39	2	19	92	2	82	5.56e-15	64.7
MS.gene057777.t1	MTR_1g063950	43.548	62	34	1	25	86	47	107	4.15e-14	63.2
MS.gene057777.t1	MTR_2g066830	42.029	69	38	2	10	78	43	109	4.95e-14	63.2
MS.gene057777.t1	MTR_8g461210	47.458	59	30	1	25	83	34	91	5.41e-14	62.8
MS.gene057777.t1	MTR_7g101740	46.875	64	33	1	25	88	39	101	6.01e-14	62.4
MS.gene057777.t1	MTR_4g005320	50.000	58	28	1	26	83	70	126	1.28e-13	62.8
MS.gene057777.t1	MTR_3g109160	47.887	71	36	1	8	78	51	120	2.79e-13	62.0
MS.gene057777.t1	MTR_7g405740	42.647	68	38	1	12	79	53	119	4.64e-13	61.2
MS.gene057777.t1	MTR_1g059770	46.552	58	30	1	26	83	49	105	6.65e-13	60.1
MS.gene057777.t1	MTR_8g094980	39.506	81	35	2	25	92	2	81	5.07e-12	57.4
MS.gene057777.t1	MTR_8g101520	43.939	66	36	1	27	92	51	115	6.71e-12	58.2
MS.gene057777.t1	MTR_3g105900	66.667	36	12	0	25	60	1171	1206	1.17e-11	59.3
MS.gene057777.t1	MTR_7g104950	43.636	55	30	1	29	83	53	106	1.45e-11	56.6
MS.gene057777.t1	MTR_2g095430	42.857	63	31	2	25	83	44	105	5.90e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057777.t1	AT2G21210	53.684	95	40	2	1	91	1	95	4.27e-33	110
MS.gene057777.t1	AT4G38840	72.059	68	18	1	25	91	32	99	1.86e-32	108
MS.gene057777.t1	AT2G21210	53.684	95	40	2	1	91	68	162	2.69e-32	110
MS.gene057777.t1	AT5G18080	62.667	75	27	1	17	90	15	89	1.85e-31	106
MS.gene057777.t1	AT5G18020	58.667	75	30	1	17	90	15	89	2.12e-30	103
MS.gene057777.t1	AT5G18060	69.231	65	19	1	27	90	25	89	3.12e-30	103
MS.gene057777.t1	AT5G18050	66.667	66	21	1	26	90	24	89	4.68e-30	102
MS.gene057777.t1	AT5G18030	60.526	76	29	1	16	90	12	87	1.11e-29	101
MS.gene057777.t1	AT5G18010	58.667	75	30	1	17	90	15	89	1.71e-29	101
MS.gene057777.t1	AT4G34770	68.116	69	20	1	25	91	34	102	3.72e-29	100
MS.gene057777.t1	AT4G38825	60.811	74	28	1	18	90	15	88	4.07e-29	100
MS.gene057777.t1	AT2G21200	61.111	72	27	1	20	90	15	86	6.68e-29	99.8
MS.gene057777.t1	AT4G38850	63.235	68	22	1	26	90	21	88	6.81e-29	99.8
MS.gene057777.t1	AT3G03820	54.348	92	36	2	2	90	6	94	1.07e-28	99.4
MS.gene057777.t1	AT3G03840	61.972	71	25	1	22	90	23	93	5.30e-28	97.4
MS.gene057777.t1	AT4G34800	50.562	89	36	2	1	86	1	84	6.25e-27	94.7
MS.gene057777.t1	AT3G03850	55.172	87	32	2	6	90	10	91	6.86e-27	94.7
MS.gene057777.t1	AT4G34810	60.563	71	23	2	25	90	47	117	2.35e-26	94.0
MS.gene057777.t1	AT4G34790	66.667	63	19	1	26	86	39	101	1.00e-25	92.4
MS.gene057777.t1	AT3G03830	57.971	69	26	1	25	90	23	91	4.46e-25	90.1
MS.gene057777.t1	AT4G13790	46.575	73	37	1	20	90	19	91	1.34e-23	86.3
MS.gene057777.t1	AT4G34780	57.971	69	26	2	26	91	28	96	1.61e-23	86.7
MS.gene057777.t1	AT4G38860	50.000	84	39	1	8	88	19	102	9.19e-23	84.7
MS.gene057777.t1	AT1G75580	48.889	90	38	2	8	90	19	107	1.76e-21	81.6
MS.gene057777.t1	AT2G21220	46.512	86	42	2	8	90	19	103	5.02e-21	80.1
MS.gene057777.t1	AT4G34760	52.239	67	31	1	24	90	41	106	1.97e-20	79.0
MS.gene057777.t1	AT1G19830	53.731	67	30	1	24	90	46	111	1.50e-19	76.6
MS.gene057777.t1	AT3G43120	61.111	54	20	1	25	78	78	130	4.34e-19	76.6
MS.gene057777.t1	AT4G36110	47.561	82	41	2	8	88	21	101	1.95e-18	73.6
MS.gene057777.t1	AT5G20810	62.963	54	19	1	25	78	78	130	3.91e-18	74.3
MS.gene057777.t1	AT2G16580	52.308	65	30	1	24	88	42	105	5.00e-18	72.8
MS.gene057777.t1	AT2G18010	50.000	72	35	1	17	88	39	109	5.71e-18	72.8
MS.gene057777.t1	AT5G20810	57.377	61	25	1	18	78	71	130	1.06e-17	73.9
MS.gene057777.t1	AT5G66260	48.235	85	42	2	8	91	15	98	1.65e-17	71.2
MS.gene057777.t1	AT3G20220	55.932	59	24	2	26	83	47	104	2.81e-16	68.6
MS.gene057777.t1	AT3G51200	53.968	63	27	2	25	86	38	99	3.31e-16	68.2
MS.gene057777.t1	AT2G45210	40.789	76	41	2	19	91	72	146	4.24e-16	69.3
MS.gene057777.t1	AT1G75590	49.296	71	31	2	13	83	33	98	8.30e-16	68.2
MS.gene057777.t1	AT4G12410	47.826	69	32	2	26	91	76	143	8.46e-16	68.2
MS.gene057777.t1	AT2G37030	46.774	62	32	1	25	86	48	108	1.18e-15	67.0
MS.gene057777.t1	AT3G60690	45.588	68	33	2	26	90	88	154	2.45e-15	67.4
MS.gene057777.t1	AT5G10990	45.946	74	35	2	10	83	29	97	2.87e-15	66.6
MS.gene057777.t1	AT2G46690	47.826	69	32	2	18	83	16	83	3.49e-15	65.9
MS.gene057777.t1	AT1G19840	47.297	74	34	2	10	83	29	97	3.82e-15	66.6
MS.gene057777.t1	AT4G00880	55.738	61	24	2	25	83	27	86	2.02e-14	63.9
MS.gene057777.t1	AT3G12830	51.562	64	26	2	15	78	43	101	2.50e-14	63.9
MS.gene057777.t1	AT4G22620	38.554	83	47	2	12	91	65	146	4.12e-14	63.9
MS.gene057777.t1	AT4G34750	43.548	62	34	1	25	86	36	96	6.86e-14	63.2
MS.gene057777.t1	AT4G34750	43.548	62	34	1	25	86	36	96	6.86e-14	63.2
MS.gene057777.t1	AT3G53250	43.548	62	31	1	25	86	51	108	8.78e-14	62.4
MS.gene057777.t1	AT3G53250	43.548	62	31	1	25	86	82	139	1.28e-13	62.4
MS.gene057777.t1	AT3G61900	50.877	57	24	2	25	78	29	84	1.52e-13	62.0
MS.gene057777.t1	AT1G56150	44.444	63	34	1	16	78	28	89	2.94e-13	60.5
MS.gene057777.t1	AT5G53590	39.726	73	38	2	25	92	45	116	3.36e-13	61.2
MS.gene057777.t1	AT3G03847	56.604	53	21	2	34	86	80	130	1.42e-12	59.3
MS.gene057777.t1	AT4G09530	39.726	73	41	2	17	86	19	91	1.85e-12	58.5
MS.gene057777.t1	AT4G31320	43.421	76	36	2	8	83	68	136	3.88e-12	59.3
MS.gene057777.t1	AT1G16510	49.057	53	26	1	26	78	54	105	7.64e-12	57.8
MS.gene057777.t1	AT2G24400	52.830	53	24	1	26	78	64	115	1.26e-11	57.8

Find 22 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCTAGATTCTTGTGTTT+TGG	0.221869	4.4:+36543711	None:intergenic
AATCAATCTGAAGAAGAATT+TGG	0.255440	4.4:-36543580	MS.gene057777:CDS
TTTAGTAATTCTTGAAATAA+TGG	0.257115	4.4:+36543601	None:intergenic
TAGACTGCAAGATAGCCTTT+TGG	0.442040	4.4:+36543676	None:intergenic
GTAATTCTTGAAATAATGGT+TGG	0.504955	4.4:+36543605	None:intergenic
AAGAATTCTCCCTCGCTACA+AGG	0.507613	4.4:+36543526	None:intergenic
TGGTTGGTTCAAGTATGATA+CGG	0.516007	4.4:+36543621	None:intergenic
GGCTATCTTGCAGTCTACGT+TGG	0.536328	4.4:-36543670	MS.gene057777:CDS
TTTGGATATGATCATCCAAT+GGG	0.541874	4.4:-36543562	MS.gene057777:CDS
GGTTGGTTCAAGTATGATAC+GGG	0.553389	4.4:+36543622	None:intergenic
ATTTGGATATGATCATCCAA+TGG	0.556875	4.4:-36543563	MS.gene057777:CDS
AAGGGATTCGAAGTCCCAAA+AGG	0.563694	4.4:-36543691	MS.gene057777:CDS
CTCACAATTCCTTGTAGCGA+GGG	0.580910	4.4:-36543535	MS.gene057777:CDS
CAAAACACAAGAATCTAGCA+AGG	0.586450	4.4:-36543710	MS.gene057777:CDS
TTCTGATAAGCTTTGCTATG+CGG	0.610874	4.4:+36543746	None:intergenic
GGAATTGTGAGACCACCCAT+TGG	0.611158	4.4:+36543547	None:intergenic
TCTACGTTGGAGATCAAATG+AGG	0.626265	4.4:-36543657	MS.gene057777:CDS
GGATATGATCATCCAATGGG+TGG	0.655640	4.4:-36543559	MS.gene057777:CDS
TCTCACAATTCCTTGTAGCG+AGG	0.655893	4.4:-36543536	MS.gene057777:CDS
AAAACACAAGAATCTAGCAA+GGG	0.656525	4.4:-36543709	MS.gene057777:CDS
ACGTTGGAGATCAAATGAGG+CGG	0.704375	4.4:-36543654	MS.gene057777:CDS
GCTCACTCAAGCGAGAACTG+AGG	0.736964	4.4:+36543500	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTAGTAATTCTTGAAATAA+TGG	+	chr4.4:36543651-36543670	None:intergenic	15.0%
!	AATCAATCTGAAGAAGAATT+TGG	-	chr4.4:36543669-36543688	MS.gene057777:CDS	25.0%
!	GTAATTCTTGAAATAATGGT+TGG	+	chr4.4:36543647-36543666	None:intergenic	25.0%
	AAAACACAAGAATCTAGCAA+GGG	-	chr4.4:36543540-36543559	MS.gene057777:CDS	30.0%
	ATTTGGATATGATCATCCAA+TGG	-	chr4.4:36543686-36543705	MS.gene057777:CDS	30.0%
	TTTGGATATGATCATCCAAT+GGG	-	chr4.4:36543687-36543706	MS.gene057777:CDS	30.0%
!!!	TCTTGTGTTTTGGAAAATGA+TGG	+	chr4.4:36543531-36543550	None:intergenic	30.0%
	CAAAACACAAGAATCTAGCA+AGG	-	chr4.4:36543539-36543558	MS.gene057777:CDS	35.0%
!	CTTGCTAGATTCTTGTGTTT+TGG	+	chr4.4:36543541-36543560	None:intergenic	35.0%
!	TGGTTGGTTCAAGTATGATA+CGG	+	chr4.4:36543631-36543650	None:intergenic	35.0%
!	TTCTGATAAGCTTTGCTATG+CGG	+	chr4.4:36543506-36543525	None:intergenic	35.0%
	TCTACGTTGGAGATCAAATG+AGG	-	chr4.4:36543592-36543611	MS.gene057777:CDS	40.0%
!	AGACTGCAAGATAGCCTTTT+GGG	+	chr4.4:36543575-36543594	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+GGG	+	chr4.4:36543630-36543649	None:intergenic	40.0%
!	TAGACTGCAAGATAGCCTTT+TGG	+	chr4.4:36543576-36543595	None:intergenic	40.0%
	AAGAATTCTCCCTCGCTACA+AGG	+	chr4.4:36543726-36543745	None:intergenic	45.0%
	AAGGGATTCGAAGTCCCAAA+AGG	-	chr4.4:36543558-36543577	MS.gene057777:CDS	45.0%
	ACGTTGGAGATCAAATGAGG+CGG	-	chr4.4:36543595-36543614	MS.gene057777:CDS	45.0%
	CTCACAATTCCTTGTAGCGA+GGG	-	chr4.4:36543714-36543733	MS.gene057777:CDS	45.0%
	GGATATGATCATCCAATGGG+TGG	-	chr4.4:36543690-36543709	MS.gene057777:CDS	45.0%
	TCTCACAATTCCTTGTAGCG+AGG	-	chr4.4:36543713-36543732	MS.gene057777:CDS	45.0%
	GGAATTGTGAGACCACCCAT+TGG	+	chr4.4:36543705-36543724	None:intergenic	50.0%
	GGCTATCTTGCAGTCTACGT+TGG	-	chr4.4:36543579-36543598	MS.gene057777:CDS	50.0%
	GCTCACTCAAGCGAGAACTG+AGG	+	chr4.4:36543752-36543771	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36543495	36543776	36543495	ID=MS.gene057777
chr4.4	mRNA	36543495	36543776	36543495	ID=MS.gene057777.t1;Parent=MS.gene057777
chr4.4	exon	36543495	36543776	36543495	ID=MS.gene057777.t1.exon1;Parent=MS.gene057777.t1
chr4.4	CDS	36543495	36543776	36543495	ID=cds.MS.gene057777.t1;Parent=MS.gene057777.t1

Gene Sequence	>MS.gene057777 ATGGGTTTCCGCATAGCAAAGCTTATCAGAATGCCATCATTTTCCAAAACACAAGAATCTAGCAAGGGATTCGAAGTCCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATCAAATGAGGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCATTATTTCAAGAATTACTAAATCAATCTGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGTAGCGAGGGAGAATTCTTAAACCTCAGTTCTCGCTTGAGTGAGCTGTAA
Protein sequence	>MS.gene057777.t1 MGFRIAKLIRMPSFSKTQESSKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPLFQELLNQSEEEFGYDHPMGGLTIPCSEGEFLNLSSRLSEL