AlfalfaGEDB | MS.gene057780

M. sativa cultivar XinJiangDaYe / MS.gene057780

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057780.t1	AES89353.1	96.8	94	3	0	1	94	1	94	4.60E-44	186.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057780.t1	P33083	76.1	92	20	1	1	92	1	90	6.3e-34	144.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057780.t1	G7JMB0	96.8	94	3	0	1	94	1	94	3.3e-44	186.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene057780	MS.gene031200	PPI
MS.gene057780	MS.gene014222	PPI
MS.gene057780	MS.gene79888	PPI
MS.gene50763	MS.gene057780	PPI
MS.gene057780	MS.gene75676	PPI
MS.gene045365	MS.gene057780	PPI
MS.gene057780	MS.gene75678	PPI
MS.gene057780	MS.gene031199	PPI
MS.gene50659	MS.gene057780	PPI
MS.gene75316	MS.gene057780	PPI
MS.gene057780	MS.gene79885	PPI
MS.gene057790	MS.gene057780	PPI
MS.gene003624	MS.gene057780	PPI
MS.gene031201	MS.gene057780	PPI
MS.gene057780	MS.gene50764	PPI
MS.gene77529	MS.gene057780	PPI
MS.gene014667	MS.gene057780	PPI
MS.gene057780	MS.gene003577	PPI
MS.gene057778	MS.gene057780	PPI
MS.gene75673	MS.gene057780	PPI
MS.gene045366	MS.gene057780	PPI
MS.gene057780	MS.gene014670	PPI
MS.gene062963	MS.gene057780	PPI
MS.gene75674	MS.gene057780	PPI
MS.gene79890	MS.gene057780	PPI
MS.gene003615	MS.gene057780	PPI
MS.gene057780	MS.gene75314	PPI
MS.gene057780	MS.gene01764	PPI
MS.gene062973	MS.gene057780	PPI
MS.gene003602	MS.gene057780	PPI
MS.gene057780	MS.gene75679	PPI
MS.gene23372	MS.gene057780	PPI
MS.gene057780	MS.gene40325	PPI
MS.gene003627	MS.gene057780	PPI
MS.gene062984	MS.gene057780	PPI
MS.gene057780	MS.gene68760	PPI
MS.gene057780	MS.gene031198	PPI
MS.gene40327	MS.gene057780	PPI
MS.gene057780	MS.gene057797	PPI
MS.gene057780	MS.gene003614	PPI
MS.gene057780	MS.gene77528	PPI
MS.gene057780	MS.gene79886	PPI
MS.gene057780	MS.gene014671	PPI
MS.gene057780	MS.gene50765	PPI
MS.gene057780	MS.gene003596	PPI
MS.gene057780	MS.gene23371	PPI
MS.gene057780	MS.gene75672	PPI
MS.gene045362	MS.gene057780	PPI
MS.gene77523	MS.gene057780	PPI
MS.gene003587	MS.gene057780	PPI
MS.gene057780	MS.gene50654	PPI
MS.gene057780	MS.gene062974	PPI
MS.gene003590	MS.gene057780	PPI
MS.gene057780	MS.gene003583	PPI
MS.gene057780	MS.gene062951	PPI
MS.gene057780	MS.gene057801	PPI
MS.gene063112	MS.gene057780	PPI
MS.gene057780	MS.gene77527	PPI
MS.gene057780	MS.gene77524	PPI
MS.gene057780	MS.gene057795	PPI
MS.gene057780	MS.gene68162	PPI
MS.gene057780	MS.gene045367	PPI
MS.gene057780	MS.gene045363	PPI
MS.gene057780	MS.gene75675	PPI
MS.gene057780	MS.gene79887	PPI
MS.gene057780	MS.gene50652	PPI
MS.gene77526	MS.gene057780	PPI
MS.gene057780	MS.gene68761	PPI
MS.gene047517	MS.gene057780	PPI
MS.gene057780	MS.gene002380	PPI
MS.gene045360	MS.gene057780	PPI
MS.gene057780	MS.gene68165	PPI
MS.gene057780	MS.gene50684	PPI
MS.gene75677	MS.gene057780	PPI
MS.gene003625	MS.gene057780	PPI
MS.gene057780	MS.gene014668	PPI
MS.gene057780	MS.gene68164	PPI
MS.gene045361	MS.gene057780	PPI
MS.gene057780	MS.gene68759	PPI
MS.gene50675	MS.gene057780	PPI
MS.gene003591	MS.gene057780	PPI
MS.gene062979	MS.gene057780	PPI
MS.gene062943	MS.gene057780	PPI
MS.gene057780	MS.gene79891	PPI
MS.gene057780	MS.gene045364	PPI
MS.gene01358	MS.gene057780	PPI
MS.gene057780	MS.gene50687	PPI
MS.gene057780	MS.gene014223	PPI
MS.gene003608	MS.gene057780	PPI
MS.gene40326	MS.gene057780	PPI
MS.gene062952	MS.gene057780	PPI
MS.gene057780	MS.gene014669	PPI
MS.gene057780	MS.gene057808	PPI
MS.gene50676	MS.gene057780	PPI
MS.gene23370	MS.gene057780	PPI
MS.gene50766	MS.gene057780	PPI
MS.gene003594	MS.gene057780	PPI
MS.gene50665	MS.gene057780	PPI
MS.gene057780	MS.gene68163	PPI
MS.gene50677	MS.gene057780	PPI
MS.gene003586	MS.gene057780	PPI
MS.gene057780	MS.gene75315	PPI
MS.gene062988	MS.gene057780	PPI
MS.gene057780	MS.gene057818	PPI
MS.gene057780	MS.gene79889	PPI
MS.gene057780	MS.gene045368	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057780.t1	MTR_4g072850	96.809	94	3	0	1	94	1	94	1.50e-64	189
MS.gene057780.t1	MTR_4g072310	81.915	94	16	1	1	94	1	93	4.89e-54	163
MS.gene057780.t1	MTR_4g072880	81.915	94	16	1	1	94	1	93	1.02e-53	162
MS.gene057780.t1	MTR_4g072250	85.870	92	11	2	1	92	1	90	4.92e-53	160
MS.gene057780.t1	MTR_4g072230	80.851	94	15	2	1	94	1	91	6.64e-52	157
MS.gene057780.t1	MTR_4g072860	80.851	94	17	1	1	94	1	93	1.39e-51	157
MS.gene057780.t1	MTR_4g072270	78.723	94	19	1	1	94	1	93	1.72e-50	154
MS.gene057780.t1	MTR_4g072940	92.391	92	7	0	3	94	33	124	4.94e-49	151
MS.gene057780.t1	MTR_3g084150	75.532	94	21	1	1	94	1	92	1.18e-48	149
MS.gene057780.t1	MTR_4g072500	75.532	94	21	2	1	94	1	92	1.50e-48	149
MS.gene057780.t1	MTR_4g072640	76.344	93	20	1	1	93	1	91	2.69e-48	148
MS.gene057780.t1	MTR_8g461410	74.468	94	22	1	1	94	1	92	3.78e-48	148
MS.gene057780.t1	MTR_3g084170	76.596	94	20	2	1	94	1	92	8.51e-48	147
MS.gene057780.t1	MTR_3g084180	74.468	94	22	1	1	94	1	92	9.60e-48	147
MS.gene057780.t1	MTR_4g072530	75.000	92	21	2	1	92	1	90	1.23e-47	147
MS.gene057780.t1	MTR_4g072570	75.532	94	21	1	1	94	1	92	2.14e-47	146
MS.gene057780.t1	MTR_3g084240	75.532	94	21	2	1	94	1	92	8.81e-47	144
MS.gene057780.t1	MTR_3g110038	74.468	94	22	2	1	94	1	92	2.05e-46	144
MS.gene057780.t1	MTR_3g117630	77.273	88	20	0	7	94	5	92	5.63e-46	142
MS.gene057780.t1	MTR_3g110042	78.652	89	17	1	1	89	1	87	9.34e-46	142
MS.gene057780.t1	MTR_4g072480	73.404	94	23	1	1	94	1	92	1.30e-45	142
MS.gene057780.t1	MTR_4g072240	70.652	92	26	1	1	92	1	91	1.91e-45	141
MS.gene057780.t1	MTR_3g084220	73.404	94	23	2	1	94	1	92	2.10e-45	141
MS.gene057780.t1	MTR_4g050700	72.340	94	25	1	1	94	1	93	2.34e-45	141
MS.gene057780.t1	MTR_2g012410	72.340	94	25	1	1	94	1	93	2.34e-45	141
MS.gene057780.t1	MTR_3g084250	72.340	94	24	1	1	94	1	92	5.45e-45	140
MS.gene057780.t1	MTR_4g072620	72.340	94	24	1	1	94	1	92	6.57e-45	140
MS.gene057780.t1	MTR_4g072220	69.149	94	28	1	1	94	1	93	9.72e-45	139
MS.gene057780.t1	MTR_4g072730	73.913	92	22	1	1	92	1	90	1.01e-44	139
MS.gene057780.t1	MTR_4g072680	72.340	94	24	1	1	94	1	92	2.20e-44	139
MS.gene057780.t1	MTR_3g110032	70.213	94	27	1	1	94	1	93	2.94e-44	138
MS.gene057780.t1	MTR_4g072580	73.913	92	17	1	1	92	1	85	3.50e-44	138
MS.gene057780.t1	MTR_4g072370	72.826	92	21	1	1	92	1	88	3.66e-44	138
MS.gene057780.t1	MTR_4g072740	75.000	92	16	1	1	92	1	85	1.09e-43	137
MS.gene057780.t1	MTR_4g072490	72.826	92	18	1	1	92	1	85	2.02e-43	136
MS.gene057780.t1	MTR_4g072870	68.478	92	28	1	1	92	1	91	2.31e-43	136
MS.gene057780.t1	MTR_4g072300	67.391	92	29	1	1	92	1	91	4.65e-43	135
MS.gene057780.t1	MTR_4g072330	69.565	92	24	1	1	92	1	88	6.01e-43	135
MS.gene057780.t1	MTR_4g072460	70.213	94	26	1	1	94	1	92	6.03e-43	135
MS.gene057780.t1	MTR_3g084260	70.652	92	26	1	1	92	1	91	2.19e-42	134
MS.gene057780.t1	MTR_4g072260	64.894	94	32	1	1	94	1	93	1.19e-41	132
MS.gene057780.t1	MTR_4g072890	66.304	92	30	1	1	92	1	91	2.12e-41	131
MS.gene057780.t1	MTR_4g072600	70.652	92	20	1	1	92	1	85	2.19e-41	131
MS.gene057780.t1	MTR_4g072830	71.429	91	22	1	1	91	1	87	2.76e-41	130
MS.gene057780.t1	MTR_4g072470	70.652	92	20	1	1	92	1	85	3.62e-41	130
MS.gene057780.t1	MTR_4g072610	72.826	92	17	1	1	92	1	84	4.85e-41	130
MS.gene057780.t1	MTR_3g084190	72.340	94	24	2	1	94	1	92	1.39e-40	129
MS.gene057780.t1	MTR_5g008370	70.213	94	22	2	1	92	1	90	1.92e-40	130
MS.gene057780.t1	MTR_5g008360	74.684	79	20	0	16	94	5	83	3.17e-40	128
MS.gene057780.t1	MTR_8g461420	70.213	94	26	2	1	94	1	92	5.42e-40	127
MS.gene057780.t1	MTR_4g072660	67.021	94	24	1	1	94	1	87	7.18e-40	127
MS.gene057780.t1	MTR_3g084210	70.213	94	26	1	1	94	1	92	1.29e-39	126
MS.gene057780.t1	MTR_3g084230	70.213	94	26	1	1	94	1	92	1.73e-39	126
MS.gene057780.t1	MTR_4g072820	70.968	93	18	3	1	92	1	85	2.00e-39	126
MS.gene057780.t1	MTR_4g072630	68.478	92	23	1	1	92	1	86	2.02e-39	126
MS.gene057780.t1	MTR_3g110045	72.826	92	23	1	3	94	62	151	1.03e-38	126
MS.gene057780.t1	MTR_4g072650	70.652	92	19	2	1	92	1	84	1.19e-38	124
MS.gene057780.t1	MTR_4g072465	66.304	92	25	1	1	92	1	86	1.44e-38	124
MS.gene057780.t1	MTR_4g072540	70.652	92	21	1	1	92	1	86	1.73e-38	124
MS.gene057780.t1	MTR_4g072380	69.892	93	20	2	1	92	1	86	4.39e-38	122
MS.gene057780.t1	MTR_3g084160	70.213	94	26	2	1	94	1	92	4.45e-38	122
MS.gene057780.t1	MTR_4g072670	69.565	92	22	1	1	92	1	86	1.75e-37	121
MS.gene057780.t1	MTR_4g072720	69.565	92	22	1	1	92	1	86	8.23e-37	119
MS.gene057780.t1	MTR_4g072290	62.766	94	20	2	1	94	1	79	4.54e-36	117
MS.gene057780.t1	MTR_4g072550	64.773	88	28	1	7	94	19	103	7.90e-36	117
MS.gene057780.t1	MTR_4g072590	67.391	92	23	1	1	92	1	85	8.18e-36	117
MS.gene057780.t1	MTR_4g072510	68.478	92	23	1	1	92	1	86	1.70e-35	116
MS.gene057780.t1	MTR_4g072910	70.270	74	22	0	19	92	27	100	1.37e-34	114
MS.gene057780.t1	MTR_4g072980	57.609	92	38	1	1	91	1	92	7.68e-34	112
MS.gene057780.t1	MTR_4g072560	55.670	97	37	2	1	91	1	97	8.07e-34	112
MS.gene057780.t1	MTR_4g072450	66.304	92	24	1	1	92	1	85	8.54e-34	112
MS.gene057780.t1	MTR_5g008350	67.901	81	19	1	1	81	1	74	1.30e-33	111
MS.gene057780.t1	MTR_4g072690	65.217	92	25	1	1	92	1	85	1.02e-32	109
MS.gene057780.t1	MTR_3g084200	70.270	74	20	2	1	74	1	72	1.10e-32	109
MS.gene057780.t1	MTR_4g072770	58.696	92	26	2	1	92	1	80	4.39e-30	102
MS.gene057780.t1	MTR_3g117640	49.000	100	43	2	1	92	1	100	1.24e-29	102
MS.gene057780.t1	MTR_4g072750	67.123	73	24	0	1	73	1	73	4.45e-29	100
MS.gene057780.t1	MTR_4g072280	61.842	76	28	1	1	76	1	75	2.75e-28	97.8
MS.gene057780.t1	MTR_3g110035	65.152	66	23	0	29	94	73	138	2.44e-26	94.7
MS.gene057780.t1	MTR_8g461400	55.319	94	14	3	1	94	1	66	1.11e-25	90.9
MS.gene057780.t1	MTR_3g113310	58.209	67	27	1	25	91	40	105	2.87e-25	90.9
MS.gene057780.t1	MTR_6g077850	56.716	67	29	0	26	92	33	99	2.92e-25	90.9
MS.gene057780.t1	MTR_4g072190	51.724	87	38	2	5	91	17	99	4.10e-25	90.5
MS.gene057780.t1	MTR_3g117610	50.000	92	38	2	5	89	16	106	8.14e-25	90.1
MS.gene057780.t1	MTR_4g072930	50.549	91	36	3	11	92	20	110	1.72e-24	89.4
MS.gene057780.t1	MTR_5g021820	48.276	87	41	2	8	91	18	103	2.73e-23	85.9
MS.gene057780.t1	MTR_8g076040	48.235	85	40	2	8	89	19	102	2.54e-22	83.6
MS.gene057780.t1	MTR_4g072840	52.688	93	10	4	1	92	1	60	4.93e-21	79.0
MS.gene057780.t1	MTR_2g043960	47.619	84	43	1	4	87	53	135	8.01e-20	78.6
MS.gene057780.t1	MTR_4g124750	46.512	86	45	1	4	89	46	130	2.69e-19	77.0
MS.gene057780.t1	MTR_4g025830	50.000	68	30	2	27	91	79	145	2.39e-18	75.1
MS.gene057780.t1	MTR_1g024085	44.578	83	44	2	4	85	13	94	3.77e-17	71.6
MS.gene057780.t1	MTR_7g118010	50.000	68	31	2	27	92	23	89	7.27e-17	69.7
MS.gene057780.t1	MTR_0388s0020	45.122	82	40	3	13	91	62	141	9.15e-17	70.5
MS.gene057780.t1	MTR_3g092220	51.515	66	29	2	22	85	28	92	1.97e-16	68.9
MS.gene057780.t1	MTR_4g005310	45.570	79	39	2	10	87	48	123	5.76e-16	68.6
MS.gene057780.t1	MTR_1g094750	45.349	86	43	2	11	93	31	115	6.24e-16	67.4
MS.gene057780.t1	MTR_4g072160	51.613	62	29	1	26	87	36	96	1.97e-15	67.0
MS.gene057780.t1	MTR_8g026730	45.588	68	34	2	27	92	27	93	1.98e-15	66.2
MS.gene057780.t1	MTR_1g009150	54.098	61	27	1	27	87	71	130	3.05e-15	67.4
MS.gene057780.t1	MTR_1g061570	50.000	62	30	1	26	87	18	78	3.26e-15	65.9
MS.gene057780.t1	MTR_8g461210	42.353	85	47	2	3	87	12	94	5.35e-15	65.1
MS.gene057780.t1	MTR_1g063950	49.153	59	29	1	26	84	47	104	2.35e-14	63.5
MS.gene057780.t1	MTR_4g005320	44.048	84	41	3	9	87	47	129	2.83e-14	64.3
MS.gene057780.t1	MTR_7g101740	48.438	64	32	1	26	89	39	101	3.87e-14	62.8
MS.gene057780.t1	MTR_1g059770	40.000	65	38	1	27	91	49	112	6.04e-14	62.8
MS.gene057780.t1	MTR_3g109160	54.098	61	27	1	27	87	69	128	2.21e-13	62.4
MS.gene057780.t1	MTR_3g098970	31.818	88	58	2	8	94	33	119	9.77e-13	60.1
MS.gene057780.t1	MTR_8g101520	43.939	66	36	1	28	93	51	115	1.19e-12	60.1
MS.gene057780.t1	MTR_3g097120	41.772	79	37	2	23	93	5	82	1.46e-12	58.5
MS.gene057780.t1	MTR_7g405740	45.902	61	32	1	27	87	67	126	1.55e-12	60.1
MS.gene057780.t1	MTR_7g104950	36.111	72	45	1	20	91	43	113	2.15e-12	58.9
MS.gene057780.t1	MTR_3g105900	68.421	38	12	0	24	61	1169	1206	4.31e-12	60.8
MS.gene057780.t1	MTR_7g104940	38.710	62	37	1	30	91	53	113	6.16e-12	57.8
MS.gene057780.t1	MTR_2g066830	35.484	93	47	3	2	92	41	122	1.60e-11	57.0
MS.gene057780.t1	MTR_8g096470	43.333	60	33	1	28	87	47	105	2.24e-11	55.8
MS.gene057780.t1	MTR_4g021810	41.176	85	45	3	4	87	6	86	2.98e-11	55.5
MS.gene057780.t1	MTR_8g094980	37.805	82	37	2	25	93	1	81	7.01e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057780.t1	AT4G38840	57.576	99	35	2	1	92	1	99	2.82e-33	111
MS.gene057780.t1	AT5G18060	67.105	76	24	1	18	92	15	90	4.02e-33	110
MS.gene057780.t1	AT5G18050	65.789	76	25	1	18	92	15	90	6.51e-33	109
MS.gene057780.t1	AT5G18020	64.474	76	26	1	18	92	15	90	9.72e-33	109
MS.gene057780.t1	AT5G18080	67.105	76	24	1	18	92	15	90	1.33e-32	108
MS.gene057780.t1	AT4G38850	60.227	88	21	2	8	92	13	89	3.69e-31	105
MS.gene057780.t1	AT2G21200	66.667	72	23	1	21	91	15	86	7.37e-31	104
MS.gene057780.t1	AT3G03840	66.667	72	22	1	23	92	23	94	8.92e-31	104
MS.gene057780.t1	AT5G18010	63.158	76	27	1	18	92	15	90	9.01e-31	104
MS.gene057780.t1	AT4G34770	54.902	102	36	3	1	92	1	102	9.47e-31	104
MS.gene057780.t1	AT2G21210	52.632	95	42	2	1	92	1	95	9.50e-31	104
MS.gene057780.t1	AT5G18030	64.865	74	25	1	20	92	15	88	1.17e-30	103
MS.gene057780.t1	AT3G03850	73.134	67	16	1	28	92	26	92	2.18e-30	103
MS.gene057780.t1	AT2G21210	52.632	95	42	2	1	92	68	162	6.12e-30	104
MS.gene057780.t1	AT3G03820	59.494	79	29	1	17	92	17	95	2.32e-29	101
MS.gene057780.t1	AT4G38825	63.889	72	25	1	22	92	18	89	2.79e-29	100
MS.gene057780.t1	AT4G34800	56.962	79	31	1	9	84	3	81	2.96e-27	95.9
MS.gene057780.t1	AT3G03830	59.211	76	28	1	20	92	17	92	3.40e-27	95.5
MS.gene057780.t1	AT4G34810	53.333	90	36	3	8	91	28	117	1.04e-26	95.1
MS.gene057780.t1	AT4G13790	50.000	86	34	2	8	91	13	91	1.79e-25	91.3
MS.gene057780.t1	AT4G34780	59.155	71	26	1	24	91	25	95	7.77e-25	90.1
MS.gene057780.t1	AT2G21220	48.889	90	42	2	5	91	15	103	1.10e-24	89.4
MS.gene057780.t1	AT4G38860	48.352	91	44	1	5	92	15	105	1.36e-24	89.4
MS.gene057780.t1	AT4G34790	56.923	65	26	1	27	89	39	103	2.24e-23	86.3
MS.gene057780.t1	AT4G34760	58.209	67	27	1	25	91	41	106	3.31e-23	85.9
MS.gene057780.t1	AT1G75580	49.451	91	38	2	8	91	18	107	4.09e-23	85.5
MS.gene057780.t1	AT1G19830	60.294	68	25	2	25	91	46	112	9.22e-21	80.1
MS.gene057780.t1	AT2G16580	47.727	88	39	2	8	89	19	105	1.94e-20	79.0
MS.gene057780.t1	AT4G36110	47.674	86	43	2	5	89	17	101	2.25e-20	78.6
MS.gene057780.t1	AT5G66260	46.067	89	46	2	5	92	11	98	1.30e-19	76.6
MS.gene057780.t1	AT2G18010	43.956	91	41	2	8	89	20	109	1.97e-19	76.3
MS.gene057780.t1	AT3G43120	48.684	76	38	1	12	87	64	138	2.38e-19	77.4
MS.gene057780.t1	AT1G19840	47.619	84	41	2	4	85	16	98	4.13e-18	74.3
MS.gene057780.t1	AT5G20810	46.429	84	44	1	4	87	56	138	4.47e-18	74.3
MS.gene057780.t1	AT5G20810	46.429	84	44	1	4	87	56	138	9.50e-18	73.9
MS.gene057780.t1	AT3G20220	48.649	74	36	2	18	90	38	110	1.19e-17	72.0
MS.gene057780.t1	AT1G75590	52.632	76	31	3	10	85	29	99	1.61e-17	72.8
MS.gene057780.t1	AT3G61900	46.154	78	38	2	18	92	21	97	2.42e-17	71.6
MS.gene057780.t1	AT2G46690	44.048	84	42	3	13	92	9	91	6.29e-17	70.5
MS.gene057780.t1	AT3G51200	47.436	78	36	3	8	84	23	96	6.78e-17	69.7
MS.gene057780.t1	AT2G45210	43.836	73	37	2	22	91	74	145	8.60e-17	70.9
MS.gene057780.t1	AT3G60690	46.377	69	33	2	27	92	88	155	1.41e-16	70.5
MS.gene057780.t1	AT5G10990	46.667	75	39	1	11	85	25	98	2.55e-16	69.3
MS.gene057780.t1	AT4G34750	45.455	66	35	1	24	89	34	98	5.49e-16	68.6
MS.gene057780.t1	AT4G34750	45.455	66	35	1	24	89	34	98	5.49e-16	68.6
MS.gene057780.t1	AT2G24400	45.882	85	39	2	9	93	52	129	3.76e-15	67.0
MS.gene057780.t1	AT4G31320	45.570	79	36	2	9	87	68	139	5.71e-15	67.0
MS.gene057780.t1	AT4G00880	50.000	68	31	2	27	92	28	94	5.71e-15	65.5
MS.gene057780.t1	AT4G12410	47.059	68	32	2	27	91	76	142	8.99e-15	65.5
MS.gene057780.t1	AT5G53590	43.836	73	35	2	26	93	45	116	1.02e-14	65.1
MS.gene057780.t1	AT3G12830	41.379	87	46	2	10	92	29	114	1.24e-14	64.7
MS.gene057780.t1	AT2G37030	50.847	59	28	1	26	84	48	105	3.30e-14	63.5
MS.gene057780.t1	AT4G22620	41.667	72	38	2	23	91	75	145	1.14e-13	62.8
MS.gene057780.t1	AT3G03847	65.000	40	14	0	45	84	88	127	1.86e-12	58.9
MS.gene057780.t1	AT3G53250	47.458	59	27	1	26	84	51	105	3.19e-12	58.2
MS.gene057780.t1	AT3G53250	47.458	59	27	1	26	84	82	136	4.20e-12	58.5
MS.gene057780.t1	AT1G56150	42.424	66	37	1	27	92	38	102	8.86e-12	57.0
MS.gene057780.t1	AT4G09530	43.662	71	34	3	18	85	22	89	1.43e-11	56.2
MS.gene057780.t1	AT2G36210	41.270	63	37	0	27	89	54	116	1.95e-11	56.6
MS.gene057780.t1	AT3G09870	46.875	64	31	2	26	87	44	106	4.98e-11	55.1
MS.gene057780.t1	AT1G16510	37.681	69	42	1	23	91	50	117	5.16e-11	55.8

Find 22 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTACCTGGTATCATTAGA+AGG	0.397060	4.4:+36551638	MS.gene057780:CDS
AGTCAAGCCGAAGAAGAGTT+TGG	0.400452	4.4:+36551805	MS.gene057780:CDS
ATCATATCCAAACTCTTCTT+CGG	0.425222	4.4:-36551812	None:intergenic
AAAAGTTGTGGACGTGCCAA+AGG	0.503430	4.4:+36551693	MS.gene057780:CDS
GCAAATCTTGAAACAATGGT+TGG	0.511544	4.4:-36551780	None:intergenic
CCGATCAGTTTCAAAAGTTG+TGG	0.514540	4.4:+36551681	MS.gene057780:CDS
GGTTGGTTCAAGTATGATAC+GGG	0.515731	4.4:-36551763	None:intergenic
CTCAGCAAATCTTGAAACAA+TGG	0.518561	4.4:-36551784	None:intergenic
TGGTTGGTTCAAGTATGATA+CGG	0.529215	4.4:-36551764	None:intergenic
GACATCTTCGGTGCAAGGAA+TGG	0.540062	4.4:-36551854	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.4:+36551823	MS.gene057780:CDS
TACACTGCAAGATAGCCCTT+TGG	0.556003	4.4:-36551709	None:intergenic
GGAATGGTGAGGCCACCCAT+TGG	0.562484	4.4:-36551838	None:intergenic
AAAGTTGTGGACGTGCCAAA+GGG	0.566864	4.4:+36551694	MS.gene057780:CDS
GTTTGGATATGATCATCCAA+TGG	0.573812	4.4:+36551822	MS.gene057780:CDS
TGAAAGACATCTTCGGTGCA+AGG	0.578580	4.4:-36551859	None:intergenic
GGCTATCTTGCAGTGTACGT+TGG	0.586173	4.4:+36551715	MS.gene057780:CDS
TATATGCTGAAAGACATCTT+CGG	0.617997	4.4:-36551866	None:intergenic
GATGACCTTCTAATGATACC+AGG	0.640691	4.4:-36551643	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.648071	4.4:+36551826	MS.gene057780:CDS
CTTCGGTGCAAGGAATGGTG+AGG	0.671810	4.4:-36551849	None:intergenic
GTTGGTTCAAGTATGATACG+GGG	0.774992	4.4:-36551762	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATCATATCCAAACTCTTCTT+CGG	-	chr4.4:36551815-36551834	None:intergenic	30.0%
	TATATGCTGAAAGACATCTT+CGG	-	chr4.4:36551869-36551888	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	+	chr4.4:36551823-36551842	MS.gene057780:CDS	30.0%
	CTCAGCAAATCTTGAAACAA+TGG	-	chr4.4:36551787-36551806	None:intergenic	35.0%
	GCAAATCTTGAAACAATGGT+TGG	-	chr4.4:36551783-36551802	None:intergenic	35.0%
	GTTTACCTGGTATCATTAGA+AGG	+	chr4.4:36551638-36551657	MS.gene057780:CDS	35.0%
	GTTTGGATATGATCATCCAA+TGG	+	chr4.4:36551822-36551841	MS.gene057780:CDS	35.0%
!	TGGTTGGTTCAAGTATGATA+CGG	-	chr4.4:36551767-36551786	None:intergenic	35.0%
!!!	CCACAACTTTTGAAACTGAT+CGG	-	chr4.4:36551684-36551703	None:intergenic	35.0%
	CCGATCAGTTTCAAAAGTTG+TGG	+	chr4.4:36551681-36551700	MS.gene057780:CDS	40.0%
	GATGACCTTCTAATGATACC+AGG	-	chr4.4:36551646-36551665	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+GGG	-	chr4.4:36551766-36551785	None:intergenic	40.0%
!	GTTGGTTCAAGTATGATACG+GGG	-	chr4.4:36551765-36551784	None:intergenic	40.0%
	AAAAGTTGTGGACGTGCCAA+AGG	+	chr4.4:36551693-36551712	MS.gene057780:CDS	45.0%
	AAAGTTGTGGACGTGCCAAA+GGG	+	chr4.4:36551694-36551713	MS.gene057780:CDS	45.0%
	AGTCAAGCCGAAGAAGAGTT+TGG	+	chr4.4:36551805-36551824	MS.gene057780:CDS	45.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.4:36551826-36551845	MS.gene057780:CDS	45.0%
	TACACTGCAAGATAGCCCTT+TGG	-	chr4.4:36551712-36551731	None:intergenic	45.0%
!	TGAAAGACATCTTCGGTGCA+AGG	-	chr4.4:36551862-36551881	None:intergenic	45.0%
	GGCTATCTTGCAGTGTACGT+TGG	+	chr4.4:36551715-36551734	MS.gene057780:CDS	50.0%
!	GACATCTTCGGTGCAAGGAA+TGG	-	chr4.4:36551857-36551876	None:intergenic	50.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	-	chr4.4:36551852-36551871	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	-	chr4.4:36551841-36551860	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36551628	36551912	36551628	ID=MS.gene057780
chr4.4	mRNA	36551628	36551912	36551628	ID=MS.gene057780.t1;Parent=MS.gene057780
chr4.4	exon	36551628	36551912	36551628	ID=MS.gene057780.t1.exon1;Parent=MS.gene057780.t1
chr4.4	CDS	36551628	36551912	36551628	ID=cds.MS.gene057780.t1;Parent=MS.gene057780.t1

Gene Sequence	>MS.gene057780 ATGGGTTTTCGTTTACCTGGTATCATTAGAAGGTCATCATCATTTACTTCAAGCCGATCAGTTTCAAAAGTTGTGGACGTGCCAAAGGGCTATCTTGCAGTGTACGTTGGTGATAAACAAAAGAGAATTGTGATCCCCGTATCATACTTGAACCAACCATTGTTTCAAGATTTGCTGAGTCAAGCCGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTCTTTCAGCATATAACTTCTCGCTTGAATGAGCTATGA
Protein sequence	>MS.gene057780.t1 MGFRLPGIIRRSSSFTSSRSVSKVVDVPKGYLAVYVGDKQKRIVIPVSYLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSRLNEL