AlfalfaGEDB | MS.gene057788

M. sativa cultivar XinJiangDaYe / MS.gene057788

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057788.t1	RHN53459.1	87	92	12	0	3	94	5	96	5.40E-37	163.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057788.t1	P33080	75.5	94	21	1	1	94	1	92	1.1e-33	143.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057788.t1	A0A396HJG4	87.0	92	12	0	3	94	5	96	3.9e-37	163.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene057788	MS.gene031200	PPI
MS.gene057788	MS.gene014222	PPI
MS.gene057788	MS.gene79888	PPI
MS.gene50763	MS.gene057788	PPI
MS.gene057788	MS.gene75676	PPI
MS.gene045365	MS.gene057788	PPI
MS.gene057788	MS.gene75678	PPI
MS.gene057788	MS.gene031199	PPI
MS.gene50659	MS.gene057788	PPI
MS.gene057788	MS.gene014223	PPI
MS.gene75316	MS.gene057788	PPI
MS.gene057788	MS.gene79885	PPI
MS.gene057790	MS.gene057788	PPI
MS.gene003624	MS.gene057788	PPI
MS.gene031201	MS.gene057788	PPI
MS.gene057788	MS.gene50764	PPI
MS.gene77529	MS.gene057788	PPI
MS.gene014667	MS.gene057788	PPI
MS.gene057788	MS.gene003577	PPI
MS.gene057778	MS.gene057788	PPI
MS.gene75673	MS.gene057788	PPI
MS.gene045366	MS.gene057788	PPI
MS.gene057788	MS.gene014670	PPI
MS.gene062963	MS.gene057788	PPI
MS.gene75674	MS.gene057788	PPI
MS.gene79890	MS.gene057788	PPI
MS.gene003615	MS.gene057788	PPI
MS.gene057788	MS.gene75314	PPI
MS.gene057788	MS.gene01764	PPI
MS.gene057788	MS.gene75679	PPI
MS.gene003602	MS.gene057788	PPI
MS.gene23372	MS.gene057788	PPI
MS.gene057788	MS.gene40325	PPI
MS.gene003627	MS.gene057788	PPI
MS.gene062984	MS.gene057788	PPI
MS.gene057788	MS.gene68760	PPI
MS.gene057788	MS.gene031198	PPI
MS.gene40327	MS.gene057788	PPI
MS.gene057788	MS.gene057797	PPI
MS.gene057788	MS.gene003614	PPI
MS.gene057788	MS.gene77528	PPI
MS.gene057788	MS.gene79886	PPI
MS.gene057788	MS.gene014671	PPI
MS.gene057788	MS.gene50765	PPI
MS.gene057788	MS.gene003596	PPI
MS.gene057788	MS.gene23371	PPI
MS.gene057788	MS.gene75672	PPI
MS.gene045362	MS.gene057788	PPI
MS.gene77523	MS.gene057788	PPI
MS.gene057788	MS.gene50654	PPI
MS.gene003587	MS.gene057788	PPI
MS.gene057788	MS.gene062974	PPI
MS.gene057788	MS.gene003583	PPI
MS.gene057788	MS.gene062951	PPI
MS.gene057788	MS.gene057801	PPI
MS.gene003590	MS.gene057788	PPI
MS.gene063112	MS.gene057788	PPI
MS.gene057788	MS.gene77527	PPI
MS.gene057788	MS.gene77524	PPI
MS.gene057788	MS.gene057795	PPI
MS.gene057788	MS.gene68162	PPI
MS.gene057788	MS.gene045367	PPI
MS.gene057788	MS.gene045363	PPI
MS.gene057788	MS.gene75675	PPI
MS.gene057788	MS.gene79887	PPI
MS.gene062973	MS.gene057788	PPI
MS.gene057788	MS.gene50652	PPI
MS.gene057788	MS.gene68761	PPI
MS.gene77526	MS.gene057788	PPI
MS.gene047517	MS.gene057788	PPI
MS.gene057788	MS.gene002380	PPI
MS.gene045360	MS.gene057788	PPI
MS.gene057788	MS.gene68165	PPI
MS.gene057788	MS.gene50684	PPI
MS.gene75677	MS.gene057788	PPI
MS.gene057788	MS.gene014668	PPI
MS.gene057788	MS.gene68164	PPI
MS.gene045361	MS.gene057788	PPI
MS.gene057788	MS.gene68759	PPI
MS.gene50675	MS.gene057788	PPI
MS.gene003591	MS.gene057788	PPI
MS.gene062979	MS.gene057788	PPI
MS.gene062943	MS.gene057788	PPI
MS.gene057788	MS.gene79891	PPI
MS.gene057788	MS.gene045364	PPI
MS.gene01358	MS.gene057788	PPI
MS.gene057788	MS.gene50687	PPI
MS.gene003608	MS.gene057788	PPI
MS.gene40326	MS.gene057788	PPI
MS.gene062952	MS.gene057788	PPI
MS.gene057788	MS.gene014669	PPI
MS.gene057788	MS.gene057808	PPI
MS.gene50676	MS.gene057788	PPI
MS.gene23370	MS.gene057788	PPI
MS.gene50766	MS.gene057788	PPI
MS.gene003594	MS.gene057788	PPI
MS.gene50665	MS.gene057788	PPI
MS.gene057788	MS.gene68163	PPI
MS.gene50677	MS.gene057788	PPI
MS.gene003625	MS.gene057788	PPI
MS.gene003586	MS.gene057788	PPI
MS.gene057788	MS.gene75315	PPI
MS.gene062988	MS.gene057788	PPI
MS.gene057788	MS.gene057818	PPI
MS.gene057788	MS.gene79889	PPI
MS.gene057788	MS.gene045368	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057788.t1	MTR_4g072500	82.979	94	14	1	1	94	1	92	9.24e-55	165
MS.gene057788.t1	MTR_4g072530	81.522	92	15	1	1	92	1	90	1.77e-52	159
MS.gene057788.t1	MTR_4g072480	78.723	94	18	1	1	94	1	92	8.91e-52	157
MS.gene057788.t1	MTR_4g072620	76.596	94	20	1	1	94	1	92	5.95e-51	155
MS.gene057788.t1	MTR_4g072730	77.419	93	19	1	1	93	1	91	6.29e-51	155
MS.gene057788.t1	MTR_4g072640	79.348	92	17	1	1	92	1	90	2.30e-50	154
MS.gene057788.t1	MTR_4g072680	77.660	94	19	1	1	94	1	92	6.80e-50	152
MS.gene057788.t1	MTR_4g072460	75.532	94	21	1	1	94	1	92	2.49e-48	149
MS.gene057788.t1	MTR_4g072310	75.789	95	20	2	1	94	1	93	3.69e-48	148
MS.gene057788.t1	MTR_4g072570	78.723	94	18	1	1	94	1	92	1.57e-47	146
MS.gene057788.t1	MTR_4g072270	72.632	95	23	2	1	94	1	93	5.54e-47	145
MS.gene057788.t1	MTR_3g084150	73.404	94	23	1	1	94	1	92	7.89e-47	145
MS.gene057788.t1	MTR_4g072660	72.340	94	19	1	1	94	1	87	1.55e-46	144
MS.gene057788.t1	MTR_4g072880	71.579	95	24	2	1	94	1	93	4.60e-46	143
MS.gene057788.t1	MTR_3g084180	72.340	94	24	1	1	94	1	92	6.71e-46	142
MS.gene057788.t1	MTR_4g072860	74.737	95	21	2	1	94	1	93	7.54e-46	142
MS.gene057788.t1	MTR_4g072240	73.118	93	22	2	1	92	1	91	1.03e-45	142
MS.gene057788.t1	MTR_8g461410	71.277	94	25	1	1	94	1	92	1.76e-45	141
MS.gene057788.t1	MTR_4g072230	75.789	95	18	3	1	94	1	91	2.02e-45	141
MS.gene057788.t1	MTR_4g072870	72.043	93	23	2	1	92	1	91	4.85e-45	140
MS.gene057788.t1	MTR_4g072250	74.737	95	20	3	1	94	1	92	1.95e-44	139
MS.gene057788.t1	MTR_3g084240	72.632	95	22	2	1	94	1	92	2.01e-44	139
MS.gene057788.t1	MTR_4g072220	71.579	95	24	2	1	94	1	93	6.07e-44	137
MS.gene057788.t1	MTR_3g084170	72.632	95	22	2	1	94	1	92	7.34e-44	137
MS.gene057788.t1	MTR_3g110042	76.404	89	19	1	1	89	1	87	1.00e-43	137
MS.gene057788.t1	MTR_4g072330	74.194	93	18	2	1	92	1	88	1.25e-43	137
MS.gene057788.t1	MTR_4g050700	70.526	95	25	2	1	94	1	93	2.17e-43	136
MS.gene057788.t1	MTR_2g012410	70.526	95	25	2	1	94	1	93	2.17e-43	136
MS.gene057788.t1	MTR_4g072300	69.892	93	25	2	1	92	1	91	2.23e-43	136
MS.gene057788.t1	MTR_4g072370	73.118	93	19	2	1	92	1	88	8.92e-43	134
MS.gene057788.t1	MTR_3g117630	74.157	89	21	1	6	94	6	92	1.31e-42	134
MS.gene057788.t1	MTR_3g110032	70.526	95	25	2	1	94	1	93	2.98e-42	133
MS.gene057788.t1	MTR_4g072830	73.913	92	18	2	1	91	1	87	5.69e-42	132
MS.gene057788.t1	MTR_3g084220	69.474	95	25	2	1	94	1	92	1.33e-41	132
MS.gene057788.t1	MTR_3g084250	68.085	94	28	1	1	94	1	92	2.30e-41	131
MS.gene057788.t1	MTR_4g072260	67.368	95	28	2	1	94	1	93	3.26e-41	130
MS.gene057788.t1	MTR_4g072890	68.817	93	26	2	1	92	1	91	3.58e-41	130
MS.gene057788.t1	MTR_4g072850	73.404	94	25	0	1	94	1	94	7.48e-41	130
MS.gene057788.t1	MTR_5g008360	74.390	82	21	0	13	94	2	83	1.05e-40	129
MS.gene057788.t1	MTR_3g110038	69.474	95	25	2	1	94	1	92	1.08e-40	129
MS.gene057788.t1	MTR_5g008370	87.143	70	9	0	24	93	22	91	1.10e-40	131
MS.gene057788.t1	MTR_4g072750	84.932	73	11	0	1	73	1	73	1.24e-40	129
MS.gene057788.t1	MTR_4g072580	69.892	93	19	2	1	92	1	85	1.48e-40	129
MS.gene057788.t1	MTR_4g072740	68.817	93	20	2	1	92	1	85	4.41e-40	127
MS.gene057788.t1	MTR_4g072490	66.667	93	22	2	1	92	1	85	6.70e-40	127
MS.gene057788.t1	MTR_4g072630	67.391	92	24	1	1	92	1	86	8.59e-40	127
MS.gene057788.t1	MTR_4g072600	68.817	93	20	2	1	92	1	85	8.94e-40	127
MS.gene057788.t1	MTR_4g072470	68.817	93	20	2	1	92	1	85	3.08e-39	125
MS.gene057788.t1	MTR_4g072540	67.391	92	24	1	1	92	1	86	4.03e-39	125
MS.gene057788.t1	MTR_3g084260	66.316	95	29	2	1	94	1	93	6.51e-39	125
MS.gene057788.t1	MTR_3g084210	68.085	94	28	1	1	94	1	92	6.98e-39	125
MS.gene057788.t1	MTR_4g072820	66.304	92	24	1	1	92	1	85	5.37e-38	122
MS.gene057788.t1	MTR_3g084190	65.957	94	30	1	1	94	1	92	1.25e-37	121
MS.gene057788.t1	MTR_4g072610	67.391	92	22	1	1	92	1	84	2.00e-37	121
MS.gene057788.t1	MTR_8g461420	67.391	92	28	1	1	92	1	90	2.04e-37	121
MS.gene057788.t1	MTR_4g072380	64.516	93	25	2	1	92	1	86	2.68e-37	120
MS.gene057788.t1	MTR_4g072670	66.304	92	25	1	1	92	1	86	2.75e-37	120
MS.gene057788.t1	MTR_4g072550	76.389	72	17	0	23	94	32	103	3.44e-37	120
MS.gene057788.t1	MTR_3g084160	65.957	94	30	1	1	94	1	92	3.61e-37	120
MS.gene057788.t1	MTR_4g072720	64.130	92	27	1	1	92	1	86	3.74e-37	120
MS.gene057788.t1	MTR_4g072940	69.565	92	28	0	3	94	33	124	5.50e-37	121
MS.gene057788.t1	MTR_4g072465	61.957	92	29	1	1	92	1	86	7.22e-37	119
MS.gene057788.t1	MTR_3g084230	66.304	92	29	1	1	92	1	90	1.06e-36	119
MS.gene057788.t1	MTR_4g072510	65.217	92	26	1	1	92	1	86	1.83e-36	118
MS.gene057788.t1	MTR_4g072650	66.304	92	23	1	1	92	1	84	4.04e-36	117
MS.gene057788.t1	MTR_4g072590	77.612	67	15	0	26	92	19	85	5.69e-36	117
MS.gene057788.t1	MTR_3g110045	67.391	92	28	1	3	94	62	151	5.65e-35	117
MS.gene057788.t1	MTR_4g072690	80.303	66	13	0	27	92	20	85	1.74e-34	113
MS.gene057788.t1	MTR_5g008350	65.854	82	19	2	1	81	1	74	9.56e-34	111
MS.gene057788.t1	MTR_4g072450	75.758	66	16	0	27	92	20	85	7.48e-33	109
MS.gene057788.t1	MTR_4g072290	62.105	95	19	3	1	94	1	79	4.16e-32	107
MS.gene057788.t1	MTR_4g072910	71.642	67	19	0	26	92	34	100	2.00e-31	106
MS.gene057788.t1	MTR_4g072980	52.632	95	44	1	1	94	1	95	1.54e-30	103
MS.gene057788.t1	MTR_4g072560	53.061	98	40	2	1	92	1	98	1.82e-30	103
MS.gene057788.t1	MTR_4g072770	71.212	66	19	0	27	92	15	80	2.71e-30	102
MS.gene057788.t1	MTR_3g117640	67.647	68	21	1	27	93	34	101	1.27e-28	99.4
MS.gene057788.t1	MTR_3g084200	65.333	75	22	2	1	74	1	72	1.45e-28	99.4
MS.gene057788.t1	MTR_3g110035	68.182	66	21	0	29	94	73	138	2.06e-28	100
MS.gene057788.t1	MTR_4g072280	64.935	77	24	2	1	76	1	75	3.07e-28	97.8
MS.gene057788.t1	MTR_3g113310	57.576	66	27	1	26	91	41	105	2.36e-24	88.6
MS.gene057788.t1	MTR_6g077850	55.072	69	31	0	24	92	31	99	4.59e-24	87.8
MS.gene057788.t1	MTR_3g117610	46.739	92	42	2	6	91	18	108	1.57e-23	86.7
MS.gene057788.t1	MTR_4g072190	59.091	66	26	1	26	91	35	99	4.81e-23	85.1
MS.gene057788.t1	MTR_4g072930	45.361	97	44	2	5	92	14	110	3.42e-22	83.6
MS.gene057788.t1	MTR_8g076040	44.828	87	45	2	7	91	19	104	1.33e-20	79.3
MS.gene057788.t1	MTR_8g461400	50.526	95	17	3	1	94	1	66	3.23e-20	77.0
MS.gene057788.t1	MTR_5g021820	53.030	66	30	1	26	91	39	103	3.47e-20	78.2
MS.gene057788.t1	MTR_4g124750	52.778	72	32	2	21	91	62	132	1.14e-19	78.2
MS.gene057788.t1	MTR_2g043960	46.429	84	40	2	13	92	58	140	2.23e-19	77.8
MS.gene057788.t1	MTR_4g005310	50.000	66	32	1	23	87	58	123	5.89e-17	71.2
MS.gene057788.t1	MTR_4g072840	44.565	92	19	2	1	92	1	60	6.50e-17	68.6
MS.gene057788.t1	MTR_1g009150	51.471	68	32	1	20	87	64	130	1.66e-16	70.5
MS.gene057788.t1	MTR_1g024085	45.570	79	42	1	7	85	17	94	2.19e-16	69.3
MS.gene057788.t1	MTR_1g094750	46.341	82	37	3	10	87	31	109	2.62e-16	68.6
MS.gene057788.t1	MTR_3g109160	44.048	84	46	1	10	93	52	134	3.64e-16	69.3
MS.gene057788.t1	MTR_4g005320	52.459	61	28	1	27	87	70	129	3.60e-15	66.6
MS.gene057788.t1	MTR_4g025830	44.928	69	34	2	24	89	76	143	6.95e-15	65.9
MS.gene057788.t1	MTR_0388s0020	43.210	81	41	3	14	91	63	141	6.98e-15	65.9
MS.gene057788.t1	MTR_1g061570	47.826	69	35	1	25	93	17	84	1.00e-14	64.7
MS.gene057788.t1	MTR_1g063950	39.744	78	46	1	13	90	34	110	1.20e-14	64.3
MS.gene057788.t1	MTR_7g118010	45.588	68	34	2	27	92	23	89	1.72e-14	63.5
MS.gene057788.t1	MTR_8g461210	43.478	69	38	1	23	91	31	98	2.68e-14	63.5
MS.gene057788.t1	MTR_3g092220	42.857	70	37	2	18	85	24	92	5.89e-14	62.4
MS.gene057788.t1	MTR_4g072160	44.304	79	41	2	10	87	20	96	1.32e-13	62.0
MS.gene057788.t1	MTR_7g101740	47.692	65	33	1	25	89	38	101	1.56e-13	61.2
MS.gene057788.t1	MTR_8g026730	41.176	68	37	2	27	92	27	93	3.09e-13	60.5
MS.gene057788.t1	MTR_3g105900	61.905	42	16	0	25	66	1170	1211	1.07e-12	62.4
MS.gene057788.t1	MTR_2g066830	36.264	91	49	3	2	92	41	122	1.16e-12	59.7
MS.gene057788.t1	MTR_1g059770	38.356	73	41	2	24	93	46	117	1.95e-12	58.9
MS.gene057788.t1	MTR_4g021810	42.169	83	42	3	10	87	5	86	6.16e-12	57.0
MS.gene057788.t1	MTR_7g405740	44.262	61	33	1	27	87	67	126	2.72e-11	56.6
MS.gene057788.t1	MTR_3g098970	28.409	88	62	1	7	94	33	119	5.56e-11	55.5
MS.gene057788.t1	MTR_3g097120	43.836	73	32	2	23	87	5	76	7.47e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057788.t1	AT4G38840	69.118	68	20	1	26	92	32	99	9.92e-32	107
MS.gene057788.t1	AT4G34770	63.218	87	25	2	9	93	22	103	1.32e-31	107
MS.gene057788.t1	AT5G18020	61.644	73	27	1	18	89	15	87	6.96e-30	102
MS.gene057788.t1	AT5G18080	59.211	76	30	1	18	92	15	90	1.62e-29	101
MS.gene057788.t1	AT5G18030	55.952	84	36	1	10	92	5	88	4.16e-29	100
MS.gene057788.t1	AT5G18060	65.217	69	23	1	25	92	22	90	6.53e-29	99.8
MS.gene057788.t1	AT5G18050	57.895	76	31	1	18	92	15	90	8.97e-29	99.4
MS.gene057788.t1	AT4G38825	50.562	89	43	1	5	92	1	89	9.21e-29	99.4
MS.gene057788.t1	AT4G34800	57.692	78	30	1	10	84	4	81	1.46e-28	99.0
MS.gene057788.t1	AT2G21200	62.857	70	25	1	23	91	17	86	1.58e-28	98.6
MS.gene057788.t1	AT3G03840	60.274	73	27	1	23	93	23	95	2.48e-28	98.6
MS.gene057788.t1	AT4G38850	62.857	70	23	1	23	89	17	86	4.36e-28	97.8
MS.gene057788.t1	AT5G18010	56.579	76	32	1	18	92	15	90	7.84e-28	97.1
MS.gene057788.t1	AT2G21210	54.217	83	31	2	12	92	18	95	1.09e-27	97.1
MS.gene057788.t1	AT3G03820	59.459	74	27	1	23	93	23	96	2.46e-27	95.9
MS.gene057788.t1	AT3G03850	63.889	72	24	1	24	93	22	93	3.21e-27	95.5
MS.gene057788.t1	AT2G21210	54.217	83	31	2	12	92	85	162	5.58e-27	97.1
MS.gene057788.t1	AT4G34810	53.659	82	34	1	7	84	28	109	1.88e-26	94.4
MS.gene057788.t1	AT3G03830	60.000	70	25	1	23	89	20	89	2.92e-25	90.5
MS.gene057788.t1	AT4G13790	47.674	86	35	2	6	89	12	89	1.09e-23	86.7
MS.gene057788.t1	AT4G34790	58.462	65	25	1	27	89	39	103	3.40e-23	85.9
MS.gene057788.t1	AT4G38860	56.716	67	29	0	26	92	39	105	7.59e-23	84.7
MS.gene057788.t1	AT1G75580	61.538	65	24	1	27	91	44	107	1.40e-22	84.3
MS.gene057788.t1	AT4G34760	57.576	66	27	1	26	91	42	106	3.81e-22	83.2
MS.gene057788.t1	AT2G21220	46.667	90	43	3	6	92	17	104	4.28e-22	82.8
MS.gene057788.t1	AT4G36110	46.988	83	43	1	7	89	20	101	3.29e-21	80.9
MS.gene057788.t1	AT4G34780	59.420	69	25	1	27	92	28	96	5.37e-21	80.1
MS.gene057788.t1	AT1G19830	58.824	68	26	2	26	92	47	113	1.24e-19	77.0
MS.gene057788.t1	AT3G43120	45.679	81	43	1	12	92	64	143	1.32e-19	78.2
MS.gene057788.t1	AT2G16580	54.545	66	29	1	26	91	43	107	4.94e-19	75.5
MS.gene057788.t1	AT5G20810	43.182	88	49	1	4	91	56	142	7.82e-19	76.3
MS.gene057788.t1	AT5G20810	43.182	88	49	1	4	91	56	142	1.53e-18	76.3
MS.gene057788.t1	AT2G18010	50.000	72	35	1	18	89	39	109	1.85e-18	73.9
MS.gene057788.t1	AT3G20220	53.226	62	27	2	27	87	47	107	2.68e-17	71.2
MS.gene057788.t1	AT5G66260	43.023	86	48	1	7	92	14	98	3.16e-17	70.5
MS.gene057788.t1	AT1G75590	46.053	76	38	2	10	85	27	99	2.24e-16	69.7
MS.gene057788.t1	AT5G10990	50.820	61	29	1	25	85	39	98	7.57e-15	65.5
MS.gene057788.t1	AT3G12830	39.241	79	47	1	14	92	37	114	7.81e-15	65.1
MS.gene057788.t1	AT3G53250	45.205	73	34	2	18	90	45	111	1.02e-14	64.7
MS.gene057788.t1	AT1G19840	52.459	61	28	1	25	85	39	98	1.40e-14	65.1
MS.gene057788.t1	AT3G53250	45.205	73	34	2	18	90	76	142	1.54e-14	65.1
MS.gene057788.t1	AT3G61900	44.286	70	35	2	26	92	29	97	3.73e-14	63.5
MS.gene057788.t1	AT2G46690	38.462	78	44	2	19	93	16	92	3.82e-14	63.2
MS.gene057788.t1	AT3G51200	51.667	60	27	2	26	84	38	96	6.28e-14	62.4
MS.gene057788.t1	AT2G45210	42.857	70	36	2	23	89	75	143	8.23e-14	63.2
MS.gene057788.t1	AT2G37030	46.154	65	34	1	26	90	48	111	1.39e-13	61.6
MS.gene057788.t1	AT3G60690	44.286	70	35	2	23	89	84	152	1.94e-13	62.4
MS.gene057788.t1	AT4G34750	43.077	65	36	1	25	89	35	98	3.43e-13	61.2
MS.gene057788.t1	AT4G34750	43.077	65	36	1	25	89	35	98	3.43e-13	61.2
MS.gene057788.t1	AT5G53590	41.667	72	36	2	26	92	45	115	3.51e-13	61.2
MS.gene057788.t1	AT4G31320	48.438	64	32	1	24	87	77	139	3.61e-13	62.0
MS.gene057788.t1	AT2G24400	52.459	61	28	1	27	87	64	123	4.72e-13	61.6
MS.gene057788.t1	AT4G09530	42.105	76	41	2	21	93	22	97	4.74e-13	60.1
MS.gene057788.t1	AT2G36210	37.333	75	47	0	17	91	44	118	8.91e-13	60.1
MS.gene057788.t1	AT3G09870	41.772	79	43	2	11	87	29	106	9.40e-13	59.3
MS.gene057788.t1	AT4G00880	43.662	71	37	2	24	92	25	94	1.18e-12	59.3
MS.gene057788.t1	AT1G56150	36.634	101	49	2	6	92	3	102	1.77e-12	58.5
MS.gene057788.t1	AT4G12410	43.056	72	35	3	21	87	68	138	7.65e-12	58.2
MS.gene057788.t1	AT4G22620	38.571	70	39	2	21	87	73	141	9.05e-12	57.8
MS.gene057788.t1	AT1G16510	40.000	65	38	1	27	91	54	117	5.05e-11	55.8

Find 21 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGGTACTTCTGATGATTT+TGG	0.185235	4.4:+36641896	None:intergenic
GGTTGGTTTAAGTATGATAT+TGG	0.286782	4.4:+36641824	None:intergenic
CATATAACTTCTTGCTTGAA+TGG	0.319184	4.4:-36641704	MS.gene057788:CDS
GTTGGTTTAAGTATGATATT+GGG	0.370306	4.4:+36641825	None:intergenic
TTCAACAAGTCTTGAAATGA+TGG	0.448405	4.4:+36641803	None:intergenic
CTCGTCGAATAACATTTAAA+CGG	0.483768	4.4:+36641951	None:intergenic
GGCTATCTTGCAGTGTATGT+TGG	0.488935	4.4:-36641872	MS.gene057788:CDS
GACATCTTCGGTGCAAGGTA+TGG	0.504522	4.4:+36641733	None:intergenic
ACAAGTCTTGAAATGATGGT+TGG	0.511297	4.4:+36641807	None:intergenic
TTTAGATATGATCATCCAAT+GGG	0.519599	4.4:-36641764	MS.gene057788:CDS
TCAAGCAAGAAGTTATATGT+TGG	0.522465	4.4:+36641708	None:intergenic
TACACTGCAAGATAGCCCTT+TGG	0.558691	4.4:+36641878	None:intergenic
GTTTAGATATGATCATCCAA+TGG	0.573812	4.4:-36641765	MS.gene057788:CDS
GGTATGGTGAGGCCACCCAT+TGG	0.575056	4.4:+36641749	None:intergenic
TATATGTTGGAAGACATCTT+CGG	0.582068	4.4:+36641721	None:intergenic
AAAATCATCAGAAGTACCAA+AGG	0.582657	4.4:-36641894	MS.gene057788:CDS
AAATCATCAGAAGTACCAAA+GGG	0.583576	4.4:-36641893	MS.gene057788:CDS
TGGAAGACATCTTCGGTGCA+AGG	0.589862	4.4:+36641728	None:intergenic
AGACTTGTTGAATCAAGCTG+AGG	0.621044	4.4:-36641792	MS.gene057788:CDS
AGATATGATCATCCAATGGG+TGG	0.649836	4.4:-36641761	MS.gene057788:CDS
CTTCGGTGCAAGGTATGGTG+AGG	0.658148	4.4:+36641738	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTTAGATATGATCATCCAAT+GGG	-	chr4.4:36641892-36641911	MS.gene057788:CDS	25.0%
!!	GTTGGTTTAAGTATGATATT+GGG	+	chr4.4:36641834-36641853	None:intergenic	25.0%
	CATATAACTTCTTGCTTGAA+TGG	-	chr4.4:36641952-36641971	MS.gene057788:CDS	30.0%
	CTCGTCGAATAACATTTAAA+CGG	+	chr4.4:36641708-36641727	None:intergenic	30.0%
	GTTTAGATATGATCATCCAA+TGG	-	chr4.4:36641891-36641910	MS.gene057788:CDS	30.0%
	TATATGTTGGAAGACATCTT+CGG	+	chr4.4:36641938-36641957	None:intergenic	30.0%
	TCAAGCAAGAAGTTATATGT+TGG	+	chr4.4:36641951-36641970	None:intergenic	30.0%
	TTCAACAAGTCTTGAAATGA+TGG	+	chr4.4:36641856-36641875	None:intergenic	30.0%
!	TTTGGTACTTCTGATGATTT+TGG	+	chr4.4:36641763-36641782	None:intergenic	30.0%
!!	AAAATCATCAGAAGTACCAA+AGG	-	chr4.4:36641762-36641781	MS.gene057788:CDS	30.0%
!!	AAATCATCAGAAGTACCAAA+GGG	-	chr4.4:36641763-36641782	MS.gene057788:CDS	30.0%
!!	GGTTGGTTTAAGTATGATAT+TGG	+	chr4.4:36641835-36641854	None:intergenic	30.0%
	ACAAGTCTTGAAATGATGGT+TGG	+	chr4.4:36641852-36641871	None:intergenic	35.0%
	AGATATGATCATCCAATGGG+TGG	-	chr4.4:36641895-36641914	MS.gene057788:CDS	40.0%
!!	AGACTTGTTGAATCAAGCTG+AGG	-	chr4.4:36641864-36641883	MS.gene057788:CDS	40.0%
!!	CTGATGATTTTGGAGATGCT+TGG	+	chr4.4:36641753-36641772	None:intergenic	40.0%
	GGCTATCTTGCAGTGTATGT+TGG	-	chr4.4:36641784-36641803	MS.gene057788:CDS	45.0%
	TACACTGCAAGATAGCCCTT+TGG	+	chr4.4:36641781-36641800	None:intergenic	45.0%
!	GACATCTTCGGTGCAAGGTA+TGG	+	chr4.4:36641926-36641945	None:intergenic	50.0%
!	TGGAAGACATCTTCGGTGCA+AGG	+	chr4.4:36641931-36641950	None:intergenic	50.0%
!	CTTCGGTGCAAGGTATGGTG+AGG	+	chr4.4:36641921-36641940	None:intergenic	55.0%
	GGTATGGTGAGGCCACCCAT+TGG	+	chr4.4:36641910-36641929	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36641697	36641981	36641697	ID=MS.gene057788
chr4.4	mRNA	36641697	36641981	36641697	ID=MS.gene057788.t1;Parent=MS.gene057788
chr4.4	exon	36641697	36641981	36641697	ID=MS.gene057788.t1.exon1;Parent=MS.gene057788.t1
chr4.4	CDS	36641697	36641981	36641697	ID=cds.MS.gene057788.t1;Parent=MS.gene057788.t1

Gene Sequence	>MS.gene057788 ATGGGTTTCCGTTTAAATGTTATTCGACGAGCATCATTAAGTGCTACTGCTAACCAAGCATCTCCAAAATCATCAGAAGTACCAAAGGGCTATCTTGCAGTGTATGTTGGAGATAAACTGAAGCGATTTGTGATCCCAATATCATACTTAAACCAACCATCATTTCAAGACTTGTTGAATCAAGCTGAGGAAGAGTTTAGATATGATCATCCAATGGGTGGCCTCACCATACCTTGCACCGAAGATGTCTTCCAACATATAACTTCTTGCTTGAATGGTCTATGA
Protein sequence	>MS.gene057788.t1 MGFRLNVIRRASLSATANQASPKSSEVPKGYLAVYVGDKLKRFVIPISYLNQPSFQDLLNQAEEEFRYDHPMGGLTIPCTEDVFQHITSCLNGL