Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068004.t1 | AES90567.2 | 97.4 | 152 | 4 | 0 | 1 | 152 | 62 | 213 | 8.70E-69 | 269.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068004.t1 | Q9LM24 | 53.7 | 82 | 38 | 0 | 11 | 92 | 189 | 270 | 3.6e-15 | 82.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068004.t1 | G7JU33 | 97.4 | 152 | 4 | 0 | 1 | 152 | 62 | 213 | 6.3e-69 | 269.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene068004 | 0.821116 | 4.79E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene068004 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene049190 | MS.gene068004 | 0.800325 | 1.52E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene068004 | 0.831835 | 1.33E-55 | -1.69E-46 |
| MS.gene049271 | MS.gene068004 | 0.813354 | 2.67E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene068004 | 0.827015 | 1.98E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene068004 | 0.820012 | 8.59E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene068004 | 0.847268 | 1.29E-59 | -1.69E-46 |
| MS.gene049711 | MS.gene068004 | 0.829454 | 5.10E-55 | -1.69E-46 |
| MS.gene049807 | MS.gene068004 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene068004 | 0.851756 | 7.21E-61 | -1.69E-46 |
| MS.gene049824 | MS.gene068004 | 0.833873 | 4.15E-56 | -1.69E-46 |
| MS.gene049825 | MS.gene068004 | 0.832569 | 8.77E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene068004 | 0.832731 | 7.99E-56 | -1.69E-46 |
| MS.gene049873 | MS.gene068004 | 0.839078 | 1.96E-57 | -1.69E-46 |
| MS.gene050020 | MS.gene068004 | 0.834654 | 2.65E-56 | -1.69E-46 |
| MS.gene05016 | MS.gene068004 | 0.834551 | 2.81E-56 | -1.69E-46 |
| MS.gene050201 | MS.gene068004 | 0.814406 | 1.57E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene068004 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene050241 | MS.gene068004 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene068004 | 0.825891 | 3.66E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene068004 | 0.82496 | 6.08E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene068004 | 0.821416 | 4.09E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene068004 | 0.808298 | 3.32E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene068004 | 0.806627 | 7.50E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene068004 | 0.858309 | 9.00E-63 | -1.69E-46 |
| MS.gene050808 | MS.gene068004 | 0.817369 | 3.42E-52 | -1.69E-46 |
| MS.gene050901 | MS.gene068004 | 0.81811 | 2.33E-52 | -1.69E-46 |
| MS.gene051180 | MS.gene068004 | 0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene068004 | 0.814742 | 1.32E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene068004 | 0.852851 | 3.52E-61 | -1.69E-46 |
| MS.gene051279 | MS.gene068004 | 0.846793 | 1.74E-59 | -1.69E-46 |
| MS.gene051328 | MS.gene068004 | 0.826833 | 2.18E-54 | -1.69E-46 |
| MS.gene05157 | MS.gene068004 | 0.818062 | 2.39E-52 | -1.69E-46 |
| MS.gene051594 | MS.gene068004 | 0.815714 | 8.02E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene068004 | 0.823512 | 1.33E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene068004 | 0.877374 | 6.61E-69 | -1.69E-46 |
| MS.gene051720 | MS.gene068004 | 0.88399 | 2.81E-71 | -1.69E-46 |
| MS.gene051744 | MS.gene068004 | 0.845207 | 4.69E-59 | -1.69E-46 |
| MS.gene051957 | MS.gene068004 | 0.822569 | 2.21E-53 | -1.69E-46 |
| MS.gene052020 | MS.gene068004 | 0.808945 | 2.41E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene068004 | 0.833442 | 5.32E-56 | -1.69E-46 |
| MS.gene052239 | MS.gene068004 | -0.813372 | 2.65E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene068004 | 0.806333 | 8.66E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene068004 | 0.813079 | 3.07E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene068004 | 0.864018 | 1.64E-64 | -1.69E-46 |
| MS.gene052519 | MS.gene068004 | 0.839698 | 1.36E-57 | -1.69E-46 |
| MS.gene052561 | MS.gene068004 | 0.800447 | 1.44E-48 | -1.69E-46 |
| MS.gene052582 | MS.gene068004 | 0.832253 | 1.05E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene068004 | 0.837809 | 4.17E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene068004 | 0.824393 | 8.27E-54 | -1.69E-46 |
| MS.gene052613 | MS.gene068004 | 0.800267 | 1.56E-48 | -1.69E-46 |
| MS.gene052665 | MS.gene068004 | 0.838992 | 2.07E-57 | -1.69E-46 |
| MS.gene052773 | MS.gene068004 | 0.827382 | 1.61E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene068004 | 0.814085 | 1.84E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene068004 | 0.826921 | 2.08E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene068004 | 0.810767 | 9.79E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene068004 | 0.830211 | 3.34E-55 | -1.69E-46 |
| MS.gene053221 | MS.gene068004 | 0.835892 | 1.29E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene068004 | 0.85698 | 2.23E-62 | -1.69E-46 |
| MS.gene053563 | MS.gene068004 | 0.811688 | 6.18E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene068004 | 0.832724 | 8.03E-56 | -1.69E-46 |
| MS.gene053597 | MS.gene068004 | 0.904735 | 9.00E-80 | -1.69E-46 |
| MS.gene053599 | MS.gene068004 | 0.945413 | 3.20E-104 | -1.69E-46 |
| MS.gene05364 | MS.gene068004 | 0.811943 | 5.44E-51 | -1.69E-46 |
| MS.gene053678 | MS.gene068004 | 0.821377 | 4.17E-53 | -1.69E-46 |
| MS.gene053883 | MS.gene068004 | 0.82349 | 1.35E-53 | -1.69E-46 |
| MS.gene053995 | MS.gene068004 | 0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene068004 | 0.817755 | 2.80E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene068004 | 0.825039 | 5.83E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene068004 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene068004 | 0.813179 | 2.92E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene068004 | 0.832473 | 9.27E-56 | -1.69E-46 |
| MS.gene05462 | MS.gene068004 | 0.803593 | 3.24E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene068004 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene054775 | MS.gene068004 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene054967 | MS.gene068004 | 0.803878 | 2.83E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene068004 | 0.825652 | 4.17E-54 | -1.69E-46 |
| MS.gene055228 | MS.gene068004 | 0.801679 | 8.03E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene068004 | 0.865418 | 5.99E-65 | -1.69E-46 |
| MS.gene055466 | MS.gene068004 | 0.879521 | 1.16E-69 | -1.69E-46 |
| MS.gene055468 | MS.gene068004 | 0.867146 | 1.70E-65 | -1.69E-46 |
| MS.gene055469 | MS.gene068004 | 0.805441 | 1.33E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene068004 | 0.849257 | 3.63E-60 | -1.69E-46 |
| MS.gene055537 | MS.gene068004 | 0.826833 | 2.18E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene068004 | -0.835109 | 2.03E-56 | -1.69E-46 |
| MS.gene055778 | MS.gene068004 | 0.837597 | 4.73E-57 | -1.69E-46 |
| MS.gene055808 | MS.gene068004 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene068004 | 0.841255 | 5.31E-58 | -1.69E-46 |
| MS.gene055890 | MS.gene068004 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene068004 | 0.827142 | 1.84E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene068004 | 0.801631 | 8.22E-49 | -1.69E-46 |
| MS.gene056005 | MS.gene068004 | 0.816476 | 5.42E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene068004 | -0.817122 | 3.88E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene068004 | 0.837455 | 5.15E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene068004 | 0.823513 | 1.33E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene068004 | 0.812403 | 4.32E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene068004 | 0.806773 | 6.99E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene068004 | 0.810125 | 1.35E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene068004 | 0.831691 | 1.45E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene068004 | 0.844884 | 5.73E-59 | -1.69E-46 |
| MS.gene056498 | MS.gene068004 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene068004 | 0.80619 | 9.28E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene068004 | 0.833606 | 4.84E-56 | -1.69E-46 |
| MS.gene056643 | MS.gene068004 | 0.808995 | 2.35E-50 | -1.69E-46 |
| MS.gene056859 | MS.gene068004 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene068004 | 0.802021 | 6.84E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene068004 | 0.836855 | 7.33E-57 | -1.69E-46 |
| MS.gene057314 | MS.gene068004 | 0.808005 | 3.83E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene068004 | 0.828143 | 1.06E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene068004 | 0.818161 | 2.26E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene068004 | 0.810668 | 1.03E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene068004 | 0.824276 | 8.81E-54 | -1.69E-46 |
| MS.gene057921 | MS.gene068004 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene068004 | 0.800928 | 1.15E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene068004 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene068004 | 0.832368 | 9.84E-56 | -1.69E-46 |
| MS.gene058216 | MS.gene068004 | 0.800661 | 1.30E-48 | -1.69E-46 |
| MS.gene05847 | MS.gene068004 | 0.805618 | 1.22E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene068004 | 0.863911 | 1.78E-64 | -1.69E-46 |
| MS.gene058636 | MS.gene068004 | 0.825744 | 3.97E-54 | -1.69E-46 |
| MS.gene058668 | MS.gene068004 | 0.801527 | 8.63E-49 | -1.69E-46 |
| MS.gene058829 | MS.gene068004 | 0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene068004 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene068004 | 0.808801 | 2.59E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene068004 | 0.849861 | 2.46E-60 | -1.69E-46 |
| MS.gene059272 | MS.gene068004 | 0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene068004 | 0.84965 | 2.82E-60 | -1.69E-46 |
| MS.gene059625 | MS.gene068004 | 0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene068004 | 0.815635 | 8.36E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene068004 | 0.824317 | 8.62E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene068004 | 0.806905 | 6.55E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene068004 | 0.81552 | 8.86E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene068004 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene068004 | 0.816628 | 5.01E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene068004 | 0.8178 | 2.73E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene068004 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene060519 | MS.gene068004 | 0.826451 | 2.69E-54 | -1.69E-46 |
| MS.gene060521 | MS.gene068004 | 0.841709 | 4.03E-58 | -1.69E-46 |
| MS.gene060587 | MS.gene068004 | 0.862576 | 4.59E-64 | -1.69E-46 |
| MS.gene060634 | MS.gene068004 | -0.8163 | 5.94E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene068004 | 0.805011 | 1.64E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068004.t1 | MTR_4g093150 | 97.368 | 152 | 4 | 0 | 1 | 152 | 62 | 213 | 1.54e-104 | 298 |
| MS.gene068004.t1 | MTR_2g009770 | 57.463 | 134 | 54 | 2 | 7 | 139 | 128 | 259 | 8.61e-35 | 122 |
| MS.gene068004.t1 | MTR_1g054835 | 35.780 | 109 | 70 | 0 | 6 | 114 | 56 | 164 | 3.14e-13 | 66.2 |
| MS.gene068004.t1 | MTR_1g070350 | 37.234 | 94 | 59 | 0 | 15 | 108 | 533 | 626 | 6.72e-12 | 62.4 |
| MS.gene068004.t1 | MTR_5g078300 | 38.750 | 80 | 49 | 0 | 7 | 86 | 612 | 691 | 7.72e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068004.t1 | AT5G16720 | 37.000 | 100 | 63 | 0 | 15 | 114 | 360 | 459 | 4.16e-15 | 71.6 |
| MS.gene068004.t1 | AT1G18265 | 52.273 | 88 | 42 | 0 | 5 | 92 | 183 | 270 | 1.63e-14 | 68.9 |
| MS.gene068004.t1 | AT1G70750 | 36.792 | 106 | 64 | 1 | 12 | 114 | 410 | 515 | 2.54e-14 | 69.7 |
| MS.gene068004.t1 | AT1G74830 | 37.500 | 96 | 60 | 0 | 15 | 110 | 305 | 400 | 2.89e-14 | 69.3 |
| MS.gene068004.t1 | AT5G06560 | 35.000 | 100 | 65 | 0 | 15 | 114 | 74 | 173 | 1.34e-12 | 64.3 |
Find 34 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAACTCAAGCAATATCT+TGG | 0.374861 | 4.3:-21062235 | MS.gene068004:CDS |
| TGATGAAGTGATCGAGTCTT+TGG | 0.389665 | 4.3:-21062323 | MS.gene068004:CDS |
| GAAAGCTAATGCGGCGTTTG+CGG | 0.398717 | 4.3:-21062488 | MS.gene068004:CDS |
| AAGAACTCAAGCAATATCTT+GGG | 0.416257 | 4.3:-21062234 | MS.gene068004:CDS |
| GTGTGTTGGAAGAGCAGTTG+AGG | 0.428235 | 4.3:-21062267 | MS.gene068004:CDS |
| AAGCAATATCTTGGGGAGGA+TGG | 0.455312 | 4.3:-21062226 | MS.gene068004:CDS |
| AGGCAATGGCGATGATTCTC+AGG | 0.455510 | 4.3:-21062423 | MS.gene068004:CDS |
| GGCTTCTTCATCTGCGGAAG+AGG | 0.462933 | 4.3:-21062443 | MS.gene068004:CDS |
| GTAGTTAGCTCTTCTGAAAA+CGG | 0.463530 | 4.3:-21062139 | MS.gene068004:CDS |
| GGCGTTTGCGGAGCTTGATA+AGG | 0.464641 | 4.3:-21062476 | MS.gene068004:CDS |
| TCTCGAGGCATGAATCTCAT+AGG | 0.486643 | 4.3:-21062291 | MS.gene068004:CDS |
| TGTGTTGGAAGAGCAGTTGA+GGG | 0.487289 | 4.3:-21062266 | MS.gene068004:CDS |
| AGCAATATCTTGGGGAGGAT+GGG | 0.488013 | 4.3:-21062225 | MS.gene068004:CDS |
| AAGCTGATGTTAGTAGAGAT+AGG | 0.499821 | 4.3:-21062189 | MS.gene068004:CDS |
| TTCATCTGCGGAAGAGGCAA+TGG | 0.519311 | 4.3:-21062437 | MS.gene068004:CDS |
| TACTAACATCAGCTTCAAGT+TGG | 0.521972 | 4.3:+21062197 | None:intergenic |
| CACAACCTTGGAAACTTACA+AGG | 0.522214 | 4.3:+21062108 | None:intergenic |
| AGCGAATCAATTCCGCAGAA+TGG | 0.525489 | 4.3:-21062368 | MS.gene068004:CDS |
| TCAAACACCTCATCCACATC+AGG | 0.540118 | 4.3:+21062550 | None:intergenic |
| AAGTGATCGAGTCTTTGGAA+TGG | 0.572333 | 4.3:-21062318 | MS.gene068004:CDS |
| TGAATCTCATAGGAGTGTGT+TGG | 0.573968 | 4.3:-21062281 | MS.gene068004:CDS |
| TTGCGGAGCTTGATAAGGAA+CGG | 0.610513 | 4.3:-21062471 | MS.gene068004:CDS |
| GCAGGTTCCTGATGTGGATG+AGG | 0.610761 | 4.3:-21062557 | MS.gene068004:CDS |
| CTTTGGAATGGACGATCTCG+AGG | 0.612708 | 4.3:-21062306 | MS.gene068004:CDS |
| AGTTGATAAAGATTGAGCGC+AGG | 0.614343 | 4.3:-21062510 | MS.gene068004:CDS |
| ACCTTGGAAACTTACAAGGT+CGG | 0.615530 | 4.3:+21062112 | None:intergenic |
| ACTTCTGTTCAGCCATTCTG+CGG | 0.620830 | 4.3:+21062356 | None:intergenic |
| TGAAATGCAGGTTCCTGATG+TGG | 0.621860 | 4.3:-21062563 | None:intergenic |
| GCTTCAGAGTGAGAAGAGCT+CGG | 0.636966 | 4.3:-21062401 | MS.gene068004:CDS |
| GCTTGATAAGGAACGGACAG+CGG | 0.649607 | 4.3:-21062464 | MS.gene068004:CDS |
| TGAGCGCAGGAAAGCTAATG+CGG | 0.653423 | 4.3:-21062497 | MS.gene068004:CDS |
| AGAACTCAAGCAATATCTTG+GGG | 0.655002 | 4.3:-21062233 | MS.gene068004:CDS |
| ACTCAAGCAATATCTTGGGG+AGG | 0.657753 | 4.3:-21062230 | MS.gene068004:CDS |
| GACAGCGGCTTCTTCATCTG+CGG | 0.673445 | 4.3:-21062449 | MS.gene068004:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGAACTCAAGCAATATCTT+GGG | - | chr4.3:21062448-21062467 | MS.gene068004:CDS | 30.0% | |
| AAGCTGATGTTAGTAGAGAT+AGG | - | chr4.3:21062493-21062512 | MS.gene068004:CDS | 35.0% | |
| AGAACTCAAGCAATATCTTG+GGG | - | chr4.3:21062449-21062468 | MS.gene068004:CDS | 35.0% | |
| GAAGAACTCAAGCAATATCT+TGG | - | chr4.3:21062447-21062466 | MS.gene068004:CDS | 35.0% | |
| TACTAACATCAGCTTCAAGT+TGG | + | chr4.3:21062488-21062507 | None:intergenic | 35.0% | |
| ! | GTAGTTAGCTCTTCTGAAAA+CGG | - | chr4.3:21062543-21062562 | MS.gene068004:CDS | 35.0% |
| TGATGAAGTGATCGAGTCTT+TGG | - | chr4.3:21062359-21062378 | MS.gene068004:CDS | 40.0% | |
| ! | AAGTGATCGAGTCTTTGGAA+TGG | - | chr4.3:21062364-21062383 | MS.gene068004:CDS | 40.0% |
| ! | TGAATCTCATAGGAGTGTGT+TGG | - | chr4.3:21062401-21062420 | MS.gene068004:CDS | 40.0% |
| !! | AGTTGATAAAGATTGAGCGC+AGG | - | chr4.3:21062172-21062191 | MS.gene068004:CDS | 40.0% |
| AAGCAATATCTTGGGGAGGA+TGG | - | chr4.3:21062456-21062475 | MS.gene068004:CDS | 45.0% | |
| ACTCAAGCAATATCTTGGGG+AGG | - | chr4.3:21062452-21062471 | MS.gene068004:CDS | 45.0% | |
| ACTTCTGTTCAGCCATTCTG+CGG | + | chr4.3:21062329-21062348 | None:intergenic | 45.0% | |
| AGCAATATCTTGGGGAGGAT+GGG | - | chr4.3:21062457-21062476 | MS.gene068004:CDS | 45.0% | |
| AGCGAATCAATTCCGCAGAA+TGG | - | chr4.3:21062314-21062333 | MS.gene068004:CDS | 45.0% | |
| TCAAACACCTCATCCACATC+AGG | + | chr4.3:21062135-21062154 | None:intergenic | 45.0% | |
| TCTCGAGGCATGAATCTCAT+AGG | - | chr4.3:21062391-21062410 | MS.gene068004:CDS | 45.0% | |
| TGTGTTGGAAGAGCAGTTGA+GGG | - | chr4.3:21062416-21062435 | MS.gene068004:CDS | 45.0% | |
| TTGCGGAGCTTGATAAGGAA+CGG | - | chr4.3:21062211-21062230 | MS.gene068004:CDS | 45.0% | |
| AGGCAATGGCGATGATTCTC+AGG | - | chr4.3:21062259-21062278 | MS.gene068004:CDS | 50.0% | |
| GAAAGCTAATGCGGCGTTTG+CGG | - | chr4.3:21062194-21062213 | MS.gene068004:CDS | 50.0% | |
| GCTTCAGAGTGAGAAGAGCT+CGG | - | chr4.3:21062281-21062300 | MS.gene068004:CDS | 50.0% | |
| GCTTGATAAGGAACGGACAG+CGG | - | chr4.3:21062218-21062237 | MS.gene068004:CDS | 50.0% | |
| GTGTGTTGGAAGAGCAGTTG+AGG | - | chr4.3:21062415-21062434 | MS.gene068004:CDS | 50.0% | |
| TGAGCGCAGGAAAGCTAATG+CGG | - | chr4.3:21062185-21062204 | MS.gene068004:CDS | 50.0% | |
| TTCATCTGCGGAAGAGGCAA+TGG | - | chr4.3:21062245-21062264 | MS.gene068004:CDS | 50.0% | |
| !! | CTTTGGAATGGACGATCTCG+AGG | - | chr4.3:21062376-21062395 | MS.gene068004:CDS | 50.0% |
| GACAGCGGCTTCTTCATCTG+CGG | - | chr4.3:21062233-21062252 | MS.gene068004:CDS | 55.0% | |
| GCAGGTTCCTGATGTGGATG+AGG | - | chr4.3:21062125-21062144 | MS.gene068004:CDS | 55.0% | |
| GGCGTTTGCGGAGCTTGATA+AGG | - | chr4.3:21062206-21062225 | MS.gene068004:CDS | 55.0% | |
| GGCTTCTTCATCTGCGGAAG+AGG | - | chr4.3:21062239-21062258 | MS.gene068004:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 21062123 | 21062581 | 21062123 | ID=MS.gene068004 |
| chr4.3 | mRNA | 21062123 | 21062581 | 21062123 | ID=MS.gene068004.t1;Parent=MS.gene068004 |
| chr4.3 | exon | 21062123 | 21062581 | 21062123 | ID=MS.gene068004.t1.exon1;Parent=MS.gene068004.t1 |
| chr4.3 | CDS | 21062123 | 21062581 | 21062123 | ID=cds.MS.gene068004.t1;Parent=MS.gene068004.t1 |
| Gene Sequence |
| Protein sequence |
