Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98612.t1 | XP_024636344.1 | 88.7 | 882 | 78 | 6 | 1 | 875 | 1 | 867 | 0.00E+00 | 1526.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98612.t1 | Q9FQ03 | 45.4 | 842 | 334 | 17 | 1 | 734 | 1 | 824 | 2.8e-184 | 647.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98612.t1 | G7JH90 | 87.5 | 879 | 73 | 6 | 1 | 875 | 1 | 846 | 0.0e+00 | 1493.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene98612 | 0.823461 | 1.37E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene98612 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene98612 | 0.849908 | 2.39E-60 | -1.69E-46 |
| MS.gene049350 | MS.gene98612 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene98612 | 0.84399 | 9.97E-59 | -1.69E-46 |
| MS.gene049666 | MS.gene98612 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene98612 | 0.828867 | 7.08E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene98612 | 0.801984 | 6.96E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene98612 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene98612 | 0.809875 | 1.52E-50 | -1.69E-46 |
| MS.gene050221 | MS.gene98612 | 0.811921 | 5.50E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene98612 | 0.805346 | 1.40E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene98612 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene98612 | 0.846712 | 1.83E-59 | -1.69E-46 |
| MS.gene050561 | MS.gene98612 | 0.848748 | 5.03E-60 | -1.69E-46 |
| MS.gene050562 | MS.gene98612 | 0.843657 | 1.22E-58 | -1.69E-46 |
| MS.gene050657 | MS.gene98612 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene051181 | MS.gene98612 | 0.831365 | 1.74E-55 | -1.69E-46 |
| MS.gene051198 | MS.gene98612 | 0.809814 | 1.57E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene98612 | 0.824812 | 6.59E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene98612 | 0.848273 | 6.81E-60 | -1.69E-46 |
| MS.gene051332 | MS.gene98612 | 0.829234 | 5.77E-55 | -1.69E-46 |
| MS.gene051594 | MS.gene98612 | 0.817047 | 4.04E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene98612 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene98612 | 0.812628 | 3.85E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene98612 | 0.81438 | 1.59E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene98612 | 0.84286 | 2.00E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene98612 | 0.807818 | 4.20E-50 | -1.69E-46 |
| MS.gene05191 | MS.gene98612 | 0.810307 | 1.23E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene98612 | 0.816435 | 5.54E-52 | -1.69E-46 |
| MS.gene052037 | MS.gene98612 | 0.82179 | 3.35E-53 | -1.69E-46 |
| MS.gene052208 | MS.gene98612 | 0.813292 | 2.76E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene98612 | -0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene98612 | 0.83195 | 1.25E-55 | -1.69E-46 |
| MS.gene052488 | MS.gene98612 | 0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene98612 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene98612 | 0.833435 | 5.34E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene98612 | 0.824325 | 8.58E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene98612 | 0.83229 | 1.03E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene98612 | 0.804863 | 1.76E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene98612 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene98612 | 0.816848 | 4.48E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene98612 | 0.809998 | 1.43E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene98612 | 0.812885 | 3.39E-51 | -1.69E-46 |
| MS.gene053154 | MS.gene98612 | 0.814711 | 1.34E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene98612 | 0.820399 | 7.00E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene98612 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene98612 | 0.857993 | 1.12E-62 | -1.69E-46 |
| MS.gene053621 | MS.gene98612 | 0.803011 | 4.27E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene98612 | 0.80004 | 1.74E-48 | -1.69E-46 |
| MS.gene053974 | MS.gene98612 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene053998 | MS.gene98612 | 0.826196 | 3.10E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene98612 | 0.833964 | 3.94E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene98612 | 0.823513 | 1.33E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene98612 | 0.810504 | 1.12E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene98612 | -0.810527 | 1.10E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene98612 | 0.826437 | 2.71E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene98612 | 0.806398 | 8.39E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene98612 | 0.813551 | 2.42E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene98612 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene98612 | 0.815415 | 9.36E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene98612 | 0.866946 | 1.96E-65 | -1.69E-46 |
| MS.gene054775 | MS.gene98612 | 0.845807 | 3.22E-59 | -1.69E-46 |
| MS.gene054991 | MS.gene98612 | 0.81564 | 8.33E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene98612 | 0.846528 | 2.05E-59 | -1.69E-46 |
| MS.gene055228 | MS.gene98612 | 0.829295 | 5.58E-55 | -1.69E-46 |
| MS.gene055589 | MS.gene98612 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene98612 | 0.843937 | 1.03E-58 | -1.69E-46 |
| MS.gene055926 | MS.gene98612 | 0.822398 | 2.42E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene98612 | 0.849326 | 3.47E-60 | -1.69E-46 |
| MS.gene056050 | MS.gene98612 | 0.877693 | 5.12E-69 | -1.69E-46 |
| MS.gene056173 | MS.gene98612 | 0.831712 | 1.43E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene98612 | 0.831415 | 1.69E-55 | -1.69E-46 |
| MS.gene056252 | MS.gene98612 | 0.841502 | 4.57E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene98612 | 0.846138 | 2.62E-59 | -1.69E-46 |
| MS.gene056595 | MS.gene98612 | 0.830144 | 3.46E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene98612 | 0.84599 | 2.88E-59 | -1.69E-46 |
| MS.gene05690 | MS.gene98612 | 0.811496 | 6.80E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene98612 | 0.808469 | 3.05E-50 | -1.69E-46 |
| MS.gene057027 | MS.gene98612 | 0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene98612 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene98612 | 0.80483 | 1.79E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene98612 | 0.818089 | 2.35E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene98612 | 0.850506 | 1.63E-60 | -1.69E-46 |
| MS.gene057915 | MS.gene98612 | 0.819766 | 9.77E-53 | -1.69E-46 |
| MS.gene057921 | MS.gene98612 | 0.809404 | 1.92E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene98612 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene98612 | 0.834242 | 3.36E-56 | -1.69E-46 |
| MS.gene058294 | MS.gene98612 | 0.819885 | 9.18E-53 | -1.69E-46 |
| MS.gene058515 | MS.gene98612 | 0.814325 | 1.63E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene98612 | 0.844559 | 7.02E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene98612 | 0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene98612 | 0.827939 | 1.19E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene98612 | 0.852703 | 3.88E-61 | -1.69E-46 |
| MS.gene059015 | MS.gene98612 | 0.824398 | 8.25E-54 | -1.69E-46 |
| MS.gene059272 | MS.gene98612 | 0.839889 | 1.21E-57 | -1.69E-46 |
| MS.gene059438 | MS.gene98612 | 0.800219 | 1.60E-48 | -1.69E-46 |
| MS.gene059584 | MS.gene98612 | 0.830761 | 2.45E-55 | -1.69E-46 |
| MS.gene059601 | MS.gene98612 | 0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene98612 | 0.845539 | 3.81E-59 | -1.69E-46 |
| MS.gene059924 | MS.gene98612 | 0.800363 | 1.49E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene98612 | 0.814887 | 1.23E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene98612 | 0.827184 | 1.80E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene98612 | 0.809786 | 1.59E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene98612 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene98612 | 0.804766 | 1.85E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene98612 | 0.800999 | 1.11E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98612.t1 | MTR_4g051920 | 87.713 | 879 | 71 | 6 | 1 | 875 | 1 | 846 | 0.0 | 1551 |
| MS.gene98612.t1 | MTR_7g114570 | 43.213 | 803 | 300 | 17 | 1 | 732 | 1 | 718 | 0.0 | 588 |
| MS.gene98612.t1 | MTR_7g114570 | 43.176 | 806 | 307 | 18 | 1 | 732 | 1 | 729 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98612.t1 | AT1G75660 | 46.310 | 840 | 325 | 18 | 1 | 732 | 1 | 822 | 0.0 | 652 |
| MS.gene98612.t1 | AT5G42540 | 45.204 | 834 | 337 | 15 | 1 | 732 | 1 | 816 | 0.0 | 637 |
| MS.gene98612.t1 | AT5G42540 | 44.615 | 845 | 337 | 16 | 1 | 732 | 1 | 827 | 0.0 | 629 |
| MS.gene98612.t1 | AT1G54490 | 39.849 | 926 | 380 | 18 | 1 | 847 | 1 | 828 | 0.0 | 608 |
| MS.gene98612.t1 | AT1G54490 | 39.765 | 850 | 357 | 16 | 60 | 847 | 14 | 770 | 0.0 | 554 |
Find 153 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCCATGATCGATCCTTTC+TGG | 0.145558 | 4.2:+50175836 | None:intergenic |
| ATTAAGAAAATTACCTCTTT+TGG | 0.154924 | 4.2:+50177520 | None:intergenic |
| GCTTGCAGCTCTTGCATATT+TGG | 0.157293 | 4.2:-50179418 | MS.gene98612:intron |
| TCTTCAGAGCCTTTGAAATT+TGG | 0.172414 | 4.2:+50180385 | None:intergenic |
| TCCATTTGCTTCGGACTTAA+AGG | 0.176185 | 4.2:-50177619 | MS.gene98612:CDS |
| AACACGGTTCACTGTTTATA+TGG | 0.232233 | 4.2:-50180087 | MS.gene98612:CDS |
| AGTCAGCAATATAATCGTTT+TGG | 0.243811 | 4.2:-50176211 | MS.gene98612:CDS |
| GCCACGCAAGTTATTGTATA+TGG | 0.254495 | 4.2:-50181864 | MS.gene98612:CDS |
| TACACGCATTTCTTCGTCTT+TGG | 0.259518 | 4.2:+50180824 | None:intergenic |
| ATCTTCATTTGTTTCTTTGC+TGG | 0.261003 | 4.2:-50179305 | MS.gene98612:CDS |
| GACACTTCACATTCTTGTTT+TGG | 0.261610 | 4.2:+50180447 | None:intergenic |
| TCTACCTCACTTGCCATCTT+TGG | 0.268311 | 4.2:-50179273 | MS.gene98612:CDS |
| GCTGGTGTTGGATGGGGTTC+AGG | 0.272833 | 4.2:-50175869 | MS.gene98612:CDS |
| AGCAAATGCATAAAAGATAA+AGG | 0.304261 | 4.2:-50178487 | MS.gene98612:CDS |
| TAGATAAAATTGGGAACATT+TGG | 0.313148 | 4.2:-50178264 | MS.gene98612:CDS |
| CCACTAAAACTAGTCGAGTT+AGG | 0.318261 | 4.2:+50175938 | None:intergenic |
| CCGCCGACATTGAGCTAAAA+AGG | 0.319916 | 4.2:-50178197 | MS.gene98612:CDS |
| TTAGCTGATGCTAATGTTCC+TGG | 0.328645 | 4.2:-50180174 | MS.gene98612:CDS |
| TGTATGCAAACTTCCATATA+TGG | 0.330217 | 4.2:-50177087 | MS.gene98612:CDS |
| ATCAGTTGTGCATAAGCTTT+AGG | 0.330700 | 4.2:+50177400 | None:intergenic |
| AAAGGGGACTTGTTTAAAAC+TGG | 0.337103 | 4.2:-50178469 | MS.gene98612:CDS |
| TCCATTATGGAAGGGTATTA+TGG | 0.337543 | 4.2:-50180334 | MS.gene98612:intron |
| GGATATCCTCTGATCCATTA+TGG | 0.339612 | 4.2:-50180347 | MS.gene98612:CDS |
| GTGCCAAAATAACCTCTCTT+AGG | 0.342056 | 4.2:+50179918 | None:intergenic |
| CAACGTTCGAGTGCGCCTTT+TGG | 0.353812 | 4.2:-50175740 | MS.gene98612:CDS |
| CATTTGAAGTGTTTGTGTTA+AGG | 0.354839 | 4.2:+50182128 | None:intergenic |
| GAAATTCAGTTGAAGTTGAT+AGG | 0.363011 | 4.2:-50176911 | MS.gene98612:CDS |
| GCTCCTTTGTGAATTGATTC+CGG | 0.366798 | 4.2:+50175890 | None:intergenic |
| TTGTTGTTGTTATCATCATT+AGG | 0.371287 | 4.2:+50182049 | None:intergenic |
| TTGAACCGCTTTGGAGCATT+TGG | 0.372267 | 4.2:+50179518 | None:intergenic |
| CCTAAATGAGCTGTTGGAAT+TGG | 0.373974 | 4.2:+50175658 | None:intergenic |
| GCAAATGCATAAAAGATAAA+GGG | 0.375415 | 4.2:-50178486 | MS.gene98612:CDS |
| GATTAAACCTTGAACCGCTT+TGG | 0.375630 | 4.2:+50179509 | None:intergenic |
| CCAATTCCAACAGCTCATTT+AGG | 0.378638 | 4.2:-50175658 | MS.gene98612:CDS |
| TTAATGTCTTCAAACACCTT+TGG | 0.379530 | 4.2:+50182151 | None:intergenic |
| CTCACTTAAGTTAAACAAGT+TGG | 0.381574 | 4.2:-50176847 | MS.gene98612:CDS |
| CCATTTGCTTCGGACTTAAA+GGG | 0.386749 | 4.2:-50177618 | MS.gene98612:CDS |
| TACGATCCTCCATGATCATT+AGG | 0.394179 | 4.2:+50175770 | None:intergenic |
| ACCATAATACCCTTCCATAA+TGG | 0.397535 | 4.2:+50180333 | None:intergenic |
| AAGAAAGAGTTCGGTAAACT+TGG | 0.398193 | 4.2:-50179113 | MS.gene98612:CDS |
| TAATCCATTCTTGAGTTCTC+TGG | 0.403742 | 4.2:+50177040 | None:intergenic |
| AAGTTATTGTATATGGCTAT+TGG | 0.406944 | 4.2:-50181857 | MS.gene98612:intron |
| CCATTATGGTCCATTTGCTT+CGG | 0.407193 | 4.2:-50177628 | MS.gene98612:CDS |
| CACTAAAACTAGTCGAGTTA+GGG | 0.413473 | 4.2:+50175939 | None:intergenic |
| GGTCAAATAATCAAGACAAT+TGG | 0.416873 | 4.2:-50176000 | MS.gene98612:CDS |
| CTTCCTCAGTCTCTCTTCCT+CGG | 0.426131 | 4.2:+50180500 | None:intergenic |
| ACTGAGGAAGGAATTTGAAA+TGG | 0.428253 | 4.2:-50180487 | MS.gene98612:CDS |
| CATAAACAACCTAATGATCA+TGG | 0.436115 | 4.2:-50175779 | MS.gene98612:CDS |
| AATATTTGACTTGTATCCTC+AGG | 0.436724 | 4.2:-50177359 | MS.gene98612:CDS |
| CTTGCATATTTGGTTGTTGA+GGG | 0.437057 | 4.2:-50179408 | MS.gene98612:CDS |
| TAAAACGTCTAGTCCTTTGC+TGG | 0.439072 | 4.2:+50180853 | None:intergenic |
| TGCAGCTTCTCATAATAGTT+AGG | 0.441009 | 4.2:+50179542 | None:intergenic |
| CCGAAGCAAATGGACCATAA+TGG | 0.445134 | 4.2:+50177628 | None:intergenic |
| GTTGATAGGTTGTTGGTTAG+TGG | 0.446578 | 4.2:-50176897 | MS.gene98612:CDS |
| AGTTGAAGTTGATAGGTTGT+TGG | 0.447716 | 4.2:-50176904 | MS.gene98612:CDS |
| CCCTTTAAGTCCGAAGCAAA+TGG | 0.454665 | 4.2:+50177618 | None:intergenic |
| CAAAGGAGCTGGTGTTGGAT+GGG | 0.455954 | 4.2:-50175876 | MS.gene98612:CDS |
| TGAAGAGTTATATCTCTTCA+AGG | 0.456045 | 4.2:-50180368 | MS.gene98612:CDS |
| TCATTAGGTTGTTTATGAAA+AGG | 0.459890 | 4.2:+50175785 | None:intergenic |
| TATAAACAGTGAACCGTGTT+CGG | 0.463074 | 4.2:+50180090 | None:intergenic |
| AGTTGATCAAAAGGTAAGAA+TGG | 0.463553 | 4.2:+50177558 | None:intergenic |
| ACCGTGTTCGGATCATAATC+AGG | 0.465301 | 4.2:+50180102 | None:intergenic |
| ACACTTAAAAGTTGATCAAA+AGG | 0.465449 | 4.2:+50177549 | None:intergenic |
| AGCTTATGCACAACTGATGT+TGG | 0.466239 | 4.2:-50177395 | MS.gene98612:CDS |
| GTTGGATGGGGTTCAGGCAG+AGG | 0.469950 | 4.2:-50175863 | MS.gene98612:CDS |
| AACACTTCCACAAATGTTGT+TGG | 0.470462 | 4.2:+50181932 | None:intergenic |
| AAATGCTCCAAAGCGGTTCA+AGG | 0.473649 | 4.2:-50179516 | MS.gene98612:intron |
| TGGTGTAAACCTTCCAGAAA+AGG | 0.474840 | 4.2:-50176470 | MS.gene98612:intron |
| ACTGTTTACAAGAAAGAGTT+CGG | 0.474900 | 4.2:-50179122 | MS.gene98612:CDS |
| TACTCCTCCAACAACATTTG+TGG | 0.478538 | 4.2:-50181939 | MS.gene98612:CDS |
| ATAAAATTATGTCATTCATA+AGG | 0.481208 | 4.2:-50180140 | MS.gene98612:CDS |
| CAGGAGTTGCTTCATGGACA+TGG | 0.488947 | 4.2:-50177950 | MS.gene98612:intron |
| ACAGCTCATTTAGGCCTCAA+TGG | 0.490917 | 4.2:-50175649 | MS.gene98612:CDS |
| ACAAGTTGGATACAAGCATA+AGG | 0.491157 | 4.2:-50176833 | MS.gene98612:intron |
| ACATGACGCGTACCACCAAC+AGG | 0.495288 | 4.2:+50176508 | None:intergenic |
| TGTTGTTATCATCATTAGGA+TGG | 0.499508 | 4.2:+50182053 | None:intergenic |
| TGCTTCGGACTTAAAGGGCA+TGG | 0.502737 | 4.2:-50177613 | MS.gene98612:CDS |
| AAACCAGAAAGGATCGATCA+TGG | 0.502745 | 4.2:-50175839 | MS.gene98612:CDS |
| CGACCTCGTCCACGACCAAA+AGG | 0.509238 | 4.2:+50175725 | None:intergenic |
| ACAAAGGAGCTGGTGTTGGA+TGG | 0.510814 | 4.2:-50175877 | MS.gene98612:CDS |
| AGGAAAGCGCTTCATGTGGC+AGG | 0.513892 | 4.2:-50177242 | MS.gene98612:intron |
| TTTAGCAGCGACGGCATTGG+AGG | 0.517153 | 4.2:-50176691 | MS.gene98612:intron |
| GAAACCAGAGAACTCAAGAA+TGG | 0.519565 | 4.2:-50177044 | MS.gene98612:CDS |
| AAAGAGTTCGGTAAACTTGG+AGG | 0.519768 | 4.2:-50179110 | MS.gene98612:CDS |
| TTGAGGCCTAAATGAGCTGT+TGG | 0.520881 | 4.2:+50175652 | None:intergenic |
| ACCTCATGAATATCCAAAGA+TGG | 0.524284 | 4.2:+50179260 | None:intergenic |
| CAAATAATCAAGACAATTGG+AGG | 0.527407 | 4.2:-50175997 | MS.gene98612:CDS |
| ATGCTAATGTTCCTGGAGAA+GGG | 0.530128 | 4.2:-50180167 | MS.gene98612:CDS |
| GATGCTAATGTTCCTGGAGA+AGG | 0.530767 | 4.2:-50180168 | MS.gene98612:CDS |
| ATTCACAAAGGAGCTGGTGT+TGG | 0.536127 | 4.2:-50175881 | MS.gene98612:CDS |
| AAAGGAGCTGGTGTTGGATG+GGG | 0.537514 | 4.2:-50175875 | MS.gene98612:CDS |
| CAGTCCAAGCATTATAAGAT+CGG | 0.541770 | 4.2:+50179967 | None:intergenic |
| CATGTTCAGCATCTACTACA+TGG | 0.544550 | 4.2:-50176490 | MS.gene98612:CDS |
| GATGCCGATCTTATAATGCT+TGG | 0.544676 | 4.2:-50179971 | MS.gene98612:CDS |
| TCTTGCATATTTGGTTGTTG+AGG | 0.545104 | 4.2:-50179409 | MS.gene98612:CDS |
| AGGAAGGAATTTGAAATGGA+AGG | 0.549315 | 4.2:-50180483 | MS.gene98612:CDS |
| AGACTGAAGACAAACATTGT+CGG | 0.549409 | 4.2:+50178627 | None:intergenic |
| TAGGTTCAAAAGTACACTGA+AGG | 0.551381 | 4.2:-50178002 | MS.gene98612:CDS |
| GAATCAATTCACAAAGGAGC+TGG | 0.552611 | 4.2:-50175887 | MS.gene98612:CDS |
| ATCCTCTGATCCATTATGGA+AGG | 0.554798 | 4.2:-50180343 | MS.gene98612:CDS |
| GCCTCAATGGAGTGATTCAA+AGG | 0.557141 | 4.2:-50175636 | MS.gene98612:CDS |
| TAACACAAACACTTCAAATG+TGG | 0.557233 | 4.2:-50182125 | MS.gene98612:CDS |
| ACTAAAACTAGTCGAGTTAG+GGG | 0.564189 | 4.2:+50175940 | None:intergenic |
| TCCTTTGAATCACTCCATTG+AGG | 0.564584 | 4.2:+50175635 | None:intergenic |
| GCAAATGGACCATAATGGAA+TGG | 0.565479 | 4.2:+50177633 | None:intergenic |
| TGGAGGAATTCAAGTAGAGA+AGG | 0.565842 | 4.2:-50175980 | MS.gene98612:CDS |
| AACCAGAAAGGATCGATCAT+GGG | 0.571325 | 4.2:-50175838 | MS.gene98612:CDS |
| GATTCAAACATAATAACACC+TGG | 0.571953 | 4.2:-50180423 | MS.gene98612:CDS |
| ATATTTGACTTGTATCCTCA+GGG | 0.572723 | 4.2:-50177358 | MS.gene98612:intron |
| ACTTCCACAAATGTTGTTGG+AGG | 0.577987 | 4.2:+50181935 | None:intergenic |
| GCCATCTTTGGATATTCATG+AGG | 0.581463 | 4.2:-50179261 | MS.gene98612:intron |
| GGTTCACTGTTTATATGGAT+CGG | 0.581491 | 4.2:-50180082 | MS.gene98612:intron |
| TTAGAGACAGAAAATTGAGA+AGG | 0.582148 | 4.2:-50178846 | MS.gene98612:CDS |
| GTTCATGCACCAAATTTCAA+AGG | 0.582293 | 4.2:-50180394 | MS.gene98612:CDS |
| TGGTGCATGAACTCAGTCCC+AGG | 0.586099 | 4.2:+50180405 | None:intergenic |
| TGCTAATGTTCCTGGAGAAG+GGG | 0.588627 | 4.2:-50180166 | MS.gene98612:CDS |
| TTAGCAGCGACGGCATTGGA+GGG | 0.605881 | 4.2:-50176690 | MS.gene98612:intron |
| CAAATGCATAAAAGATAAAG+GGG | 0.607587 | 4.2:-50178485 | MS.gene98612:CDS |
| ACCCTTCCATAATGGATCAG+AGG | 0.608192 | 4.2:+50180341 | None:intergenic |
| AAATACGAGCATCCTGTTGG+TGG | 0.610921 | 4.2:-50176520 | MS.gene98612:CDS |
| GAGCGAAAATGAACCAGCAA+AGG | 0.612334 | 4.2:-50180866 | MS.gene98612:CDS |
| TCCTCTGATCCATTATGGAA+GGG | 0.614366 | 4.2:-50180342 | MS.gene98612:CDS |
| CAGGCAGAGGAAAACCAGAA+AGG | 0.620411 | 4.2:-50175850 | MS.gene98612:CDS |
| TAAACTTGGAGGATATCTTG+TGG | 0.624204 | 4.2:-50179099 | MS.gene98612:CDS |
| GTACACTGAAGGATTGCTGT+GGG | 0.629220 | 4.2:-50177991 | MS.gene98612:CDS |
| CGAGGAAGAGAGACTGAGGA+AGG | 0.629280 | 4.2:-50180499 | MS.gene98612:CDS |
| TCCTGATTATGATCCGAACA+CGG | 0.629375 | 4.2:-50180103 | MS.gene98612:CDS |
| GCCATATACAATAACTTGCG+TGG | 0.634185 | 4.2:+50181863 | None:intergenic |
| GTCAAATACGAGCATCCTGT+TGG | 0.634197 | 4.2:-50176523 | MS.gene98612:CDS |
| GTTACTCAACAAATATCCAA+AGG | 0.635055 | 4.2:-50182167 | MS.gene98612:CDS |
| TGTCGTTCTCAACACACTCG+TGG | 0.635298 | 4.2:+50176653 | None:intergenic |
| ATATCCAAAGATGGCAAGTG+AGG | 0.637105 | 4.2:+50179269 | None:intergenic |
| TGAAAACGACATAAATGAGA+CGG | 0.639736 | 4.2:-50176251 | MS.gene98612:CDS |
| AGAATTTCAATGTGTACACA+TGG | 0.639863 | 4.2:-50175694 | MS.gene98612:CDS |
| GTGATTCAAAGGATAGAAGT+CGG | 0.641506 | 4.2:-50175625 | MS.gene98612:CDS |
| TCATCATTAGGATGGAAACA+TGG | 0.643815 | 4.2:+50182061 | None:intergenic |
| CCTTTGTGAATTGATTCCGG+AGG | 0.644128 | 4.2:+50175893 | None:intergenic |
| AGTACACTGAAGGATTGCTG+TGG | 0.652414 | 4.2:-50177992 | MS.gene98612:CDS |
| TTTGTATTTATAGGAAACCG+AGG | 0.654850 | 4.2:-50180517 | MS.gene98612:intron |
| TGGAGATTTCTTGACTGACA+AGG | 0.655095 | 4.2:-50178449 | MS.gene98612:intron |
| AGTAACCATCTATAAAACGA+TGG | 0.659634 | 4.2:+50182184 | None:intergenic |
| ATTCAAACATAATAACACCT+GGG | 0.664721 | 4.2:-50180422 | MS.gene98612:CDS |
| TAGAAGGAAAGCGCTTCATG+TGG | 0.670368 | 4.2:-50177246 | MS.gene98612:CDS |
| CTAAAACTAGTCGAGTTAGG+GGG | 0.671667 | 4.2:+50175941 | None:intergenic |
| ATATCTTGTGGACATAAACA+AGG | 0.676816 | 4.2:-50179087 | MS.gene98612:intron |
| AAACCGAGGAAGAGAGACTG+AGG | 0.678422 | 4.2:-50180503 | MS.gene98612:CDS |
| TGCAACCAAATGCTCCAAAG+CGG | 0.679567 | 4.2:-50179523 | MS.gene98612:CDS |
| AAACAGTTAGGGGAGAAACA+TGG | 0.682040 | 4.2:-50178955 | MS.gene98612:intron |
| ACATAAATGAGACGGTACTG+TGG | 0.689993 | 4.2:-50176243 | MS.gene98612:CDS |
| CCTCCGGAATCAATTCACAA+AGG | 0.701480 | 4.2:-50175893 | MS.gene98612:CDS |
| ATTCAAAGGATAGAAGTCGG+TGG | 0.717801 | 4.2:-50175622 | MS.gene98612:CDS |
| AAACAACCTAATGATCATGG+AGG | 0.725320 | 4.2:-50175776 | MS.gene98612:CDS |
| TCATTCATAAGGAAACAGCG+TGG | 0.793260 | 4.2:-50180129 | MS.gene98612:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAGTAAGTATAATA+TGG | + | chr4.2:50176003-50176022 | None:intergenic | 10.0% |
| !! | AAATCAAATAATATTTATCA+TGG | + | chr4.2:50180366-50180385 | None:intergenic | 10.0% |
| !! | AATGTTAAAAAATGAATAAA+TGG | + | chr4.2:50176421-50176440 | None:intergenic | 10.0% |
| !! | TATTTCATTGTTTATTAATT+TGG | - | chr4.2:50177590-50177609 | MS.gene98612:CDS | 10.0% |
| !! | TTAATGTTTAAAAAAATTGA+GGG | + | chr4.2:50180816-50180835 | None:intergenic | 10.0% |
| !! | TTTAATGTTTAAAAAAATTG+AGG | + | chr4.2:50180817-50180836 | None:intergenic | 10.0% |
| !!! | TTTTTCAAAATCTAAAAATA+AGG | + | chr4.2:50179280-50179299 | None:intergenic | 10.0% |
| !! | AAACATAGTTGAAAATTTAA+AGG | + | chr4.2:50180860-50180879 | None:intergenic | 15.0% |
| !! | AACATAGTTGAAAATTTAAA+GGG | + | chr4.2:50180859-50180878 | None:intergenic | 15.0% |
| !! | ATAAAATTATGTCATTCATA+AGG | - | chr4.2:50177672-50177691 | MS.gene98612:intron | 15.0% |
| !! | ATAACAATATCATTCAATAA+TGG | - | chr4.2:50179767-50179786 | MS.gene98612:intron | 15.0% |
| !! | ATTAATGATATTTCTCATTT+AGG | - | chr4.2:50180701-50180720 | MS.gene98612:intron | 15.0% |
| !! | GATTCAATTTAAAAAAATCT+TGG | - | chr4.2:50181768-50181787 | MS.gene98612:intron | 15.0% |
| !! | TATTGATAAATGACTAAATA+TGG | + | chr4.2:50177919-50177938 | None:intergenic | 15.0% |
| !! | TTAAAAAATGAATAAATGGA+AGG | + | chr4.2:50176417-50176436 | None:intergenic | 15.0% |
| !! | TTAATGATATTTCTCATTTA+GGG | - | chr4.2:50180702-50180721 | MS.gene98612:intron | 15.0% |
| !! | TTTCCTTAAAAAAAAAAAAG+AGG | - | chr4.2:50176088-50176107 | MS.gene98612:intron | 15.0% |
| !!! | TGTTTTTCATATTTATTAGA+TGG | - | chr4.2:50176912-50176931 | MS.gene98612:CDS | 15.0% |
| !!! | TTGTCATTTTATTTATCATT+TGG | - | chr4.2:50181227-50181246 | MS.gene98612:intron | 15.0% |
| !! | AAACAAAGAACAAATGTAAA+AGG | + | chr4.2:50179410-50179429 | None:intergenic | 20.0% |
| !! | AAGAAGTTGTACATATTATT+CGG | + | chr4.2:50181031-50181050 | None:intergenic | 20.0% |
| !! | AAGAATATTATTAGATGTGA+TGG | + | chr4.2:50180340-50180359 | None:intergenic | 20.0% |
| !! | AAGTAAATGTATAACATTAG+GGG | + | chr4.2:50176855-50176874 | None:intergenic | 20.0% |
| !! | AATAACCAAACTGTATTAAA+TGG | - | chr4.2:50180003-50180022 | MS.gene98612:intron | 20.0% |
| !! | ACAAGTAAATGTATAACATT+AGG | + | chr4.2:50176857-50176876 | None:intergenic | 20.0% |
| !! | ACTAACAAAATTGAATATTC+AGG | - | chr4.2:50181791-50181810 | MS.gene98612:intron | 20.0% |
| !! | ACTAATATACTATACACTAT+GGG | + | chr4.2:50176730-50176749 | None:intergenic | 20.0% |
| !! | AGAAAAATAAATAAGGGATT+AGG | + | chr4.2:50178772-50178791 | None:intergenic | 20.0% |
| !! | AGTTGAAAAATTCATTCTTA+TGG | - | chr4.2:50178901-50178920 | MS.gene98612:CDS | 20.0% |
| !! | CAACAAAAAAAACTAAGATT+TGG | + | chr4.2:50177758-50177777 | None:intergenic | 20.0% |
| !! | CAAGTAAATGTATAACATTA+GGG | + | chr4.2:50176856-50176875 | None:intergenic | 20.0% |
| !! | TACTAATATACTATACACTA+TGG | + | chr4.2:50176731-50176750 | None:intergenic | 20.0% |
| !! | TGCATATACTATTTGAAAAA+TGG | - | chr4.2:50179022-50179041 | MS.gene98612:intron | 20.0% |
| !! | TTATAGTTAAAGAACAAACT+TGG | - | chr4.2:50180086-50180105 | MS.gene98612:CDS | 20.0% |
| !!! | AAACATTTTTTCCTATAGTT+AGG | - | chr4.2:50178581-50178600 | MS.gene98612:intron | 20.0% |
| !!! | AATTTTCAACTATGTTTTGT+AGG | - | chr4.2:50180863-50180882 | MS.gene98612:CDS | 20.0% |
| !!! | ACTCCTCTTTTTTTTTTTTA+AGG | + | chr4.2:50176094-50176113 | None:intergenic | 20.0% |
| !!! | AGTTTGTTCTTTAACTATAA+TGG | + | chr4.2:50180086-50180105 | None:intergenic | 20.0% |
| !!! | ATTAAGAAAATTACCTCTTT+TGG | + | chr4.2:50180295-50180314 | None:intergenic | 20.0% |
| !!! | CATCCTTTTTAGATAAAATT+GGG | - | chr4.2:50179539-50179558 | MS.gene98612:CDS | 20.0% |
| !!! | GATTTTGAAATTGATATAGA+AGG | - | chr4.2:50180550-50180569 | MS.gene98612:intron | 20.0% |
| !!! | TCATTAAAGTTGTTTGATTT+TGG | + | chr4.2:50177092-50177111 | None:intergenic | 20.0% |
| !!! | TGTTTTTGTTATCTGATAAA+TGG | - | chr4.2:50179446-50179465 | MS.gene98612:intron | 20.0% |
| !!! | TTAAGAAAATTACCTCTTTT+GGG | + | chr4.2:50180294-50180313 | None:intergenic | 20.0% |
| !!! | TTAGATTTTGAAAAACACAA+AGG | - | chr4.2:50179285-50179304 | MS.gene98612:CDS | 20.0% |
| ! | AAAAATAAGAAAGTCTCTGT+AGG | + | chr4.2:50179673-50179692 | None:intergenic | 25.0% |
| ! | AAACCCTTATATATCATGAT+AGG | + | chr4.2:50176668-50176687 | None:intergenic | 25.0% |
| ! | AAAGGAAGGATATAAGAAAA+TGG | - | chr4.2:50181447-50181466 | MS.gene98612:intron | 25.0% |
| ! | AAGGAAGGATATAAGAAAAT+GGG | - | chr4.2:50181448-50181467 | MS.gene98612:intron | 25.0% |
| ! | AAGTAAGTCATTTATGCAAA+TGG | - | chr4.2:50176703-50176722 | MS.gene98612:intron | 25.0% |
| ! | AAGTTATTGTATATGGCTAT+TGG | - | chr4.2:50175955-50175974 | MS.gene98612:CDS | 25.0% |
| ! | AATGTAATACAATCTACAGT+CGG | + | chr4.2:50181694-50181713 | None:intergenic | 25.0% |
| ! | ACCATTATATGAAAACAGTT+AGG | - | chr4.2:50178845-50178864 | MS.gene98612:CDS | 25.0% |
| ! | AGCAAATGCATAAAAGATAA+AGG | - | chr4.2:50179325-50179344 | MS.gene98612:CDS | 25.0% |
| ! | AGTAAGTCATTTATGCAAAT+GGG | - | chr4.2:50176704-50176723 | MS.gene98612:intron | 25.0% |
| ! | ATTCAAACATAATAACACCT+GGG | - | chr4.2:50177390-50177409 | MS.gene98612:CDS | 25.0% |
| ! | CAAAATAGACCAATTAAAGT+CGG | - | chr4.2:50181655-50181674 | MS.gene98612:intron | 25.0% |
| ! | CAAATGCATAAAAGATAAAG+GGG | - | chr4.2:50179327-50179346 | MS.gene98612:CDS | 25.0% |
| ! | CAATAAGAAGAGAGAAAAAA+AGG | + | chr4.2:50177118-50177137 | None:intergenic | 25.0% |
| ! | CATTATATGAAAACAGTTAG+GGG | - | chr4.2:50178847-50178866 | MS.gene98612:CDS | 25.0% |
| ! | CCATTATATGAAAACAGTTA+GGG | - | chr4.2:50178846-50178865 | MS.gene98612:CDS | 25.0% |
| ! | GAAAAATTCATTCTTATGGT+TGG | - | chr4.2:50178905-50178924 | MS.gene98612:CDS | 25.0% |
| ! | GAGTGATATAAAAAAAAGAG+TGG | - | chr4.2:50176110-50176129 | MS.gene98612:intron | 25.0% |
| ! | GCAAATGCATAAAAGATAAA+GGG | - | chr4.2:50179326-50179345 | MS.gene98612:CDS | 25.0% |
| ! | GTCGAATCTAGTAATTTATT+TGG | - | chr4.2:50176254-50176273 | MS.gene98612:CDS | 25.0% |
| ! | TAAATTGAATCTTCTGTAGT+TGG | + | chr4.2:50181759-50181778 | None:intergenic | 25.0% |
| ! | TAGATAAAATTGGGAACATT+TGG | - | chr4.2:50179548-50179567 | MS.gene98612:CDS | 25.0% |
| ! | TATAAAACAGTTGAATGATG+AGG | - | chr4.2:50177050-50177069 | MS.gene98612:CDS | 25.0% |
| ! | TCAAACATTTCAAATATCAG+AGG | + | chr4.2:50177794-50177813 | None:intergenic | 25.0% |
| ! | TCACAAAAGTTGTTTAAAAG+TGG | - | chr4.2:50177210-50177229 | MS.gene98612:intron | 25.0% |
| ! | TCATTTCTCTTGAATGATTA+AGG | - | chr4.2:50177244-50177263 | MS.gene98612:CDS | 25.0% |
| ! | TGATGTCTAAATATTACTAC+TGG | - | chr4.2:50176446-50176465 | MS.gene98612:intron | 25.0% |
| ! | TTAGTATAATATGGTCTCTT+TGG | - | chr4.2:50176486-50176505 | MS.gene98612:CDS | 25.0% |
| ! | TTGATCAAATAACTCAACTA+AGG | - | chr4.2:50176879-50176898 | MS.gene98612:CDS | 25.0% |
| ! | TTGTTAGCTAACAACAAAAT+TGG | - | chr4.2:50181412-50181431 | MS.gene98612:intron | 25.0% |
| !! | ACACTTAAAAGTTGATCAAA+AGG | + | chr4.2:50180266-50180285 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGTTCATTTGT+TGG | - | chr4.2:50176513-50176532 | MS.gene98612:CDS | 25.0% |
| !! | ATCTAGGTTTGAACATTTTA+AGG | + | chr4.2:50179961-50179980 | None:intergenic | 25.0% |
| !! | ATGGATTAATTATGCATTCA+TGG | - | chr4.2:50179041-50179060 | MS.gene98612:intron | 25.0% |
| !! | ATTGGCTTATTTGAGATAAA+CGG | + | chr4.2:50176823-50176842 | None:intergenic | 25.0% |
| !! | CCAATTTTATCTAAAAAGGA+TGG | + | chr4.2:50179541-50179560 | None:intergenic | 25.0% |
| !! | CCATCCTTTTTAGATAAAAT+TGG | - | chr4.2:50179538-50179557 | MS.gene98612:CDS | 25.0% |
| !! | CGAATTTGATACTTTCTTTT+GGG | + | chr4.2:50176150-50176169 | None:intergenic | 25.0% |
| !! | GTTCCCAATTTTATCTAAAA+AGG | + | chr4.2:50179545-50179564 | None:intergenic | 25.0% |
| !! | GTTTTGCTACATTATTAAGT+TGG | - | chr4.2:50177561-50177580 | MS.gene98612:CDS | 25.0% |
| !! | TAAGAAAATTACCTCTTTTG+GGG | + | chr4.2:50180293-50180312 | None:intergenic | 25.0% |
| !! | TAATCACTTCTATTTTCTCT+AGG | - | chr4.2:50180641-50180660 | MS.gene98612:intron | 25.0% |
| !! | TCATTAGGTTGTTTATGAAA+AGG | + | chr4.2:50182030-50182049 | None:intergenic | 25.0% |
| !! | TTATAAAGAGAAGTTTTCTG+TGG | - | chr4.2:50179586-50179605 | MS.gene98612:intron | 25.0% |
| !! | TTATTTTCTCTGTTCAATCA+AGG | + | chr4.2:50179988-50180007 | None:intergenic | 25.0% |
| !! | TTGTTGTTGTTATCATCATT+AGG | + | chr4.2:50175766-50175785 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCTCTCTTCTTAT+TGG | - | chr4.2:50177116-50177135 | MS.gene98612:intron | 25.0% |
| !!! | GACTTTAATTGGTCTATTTT+GGG | + | chr4.2:50181656-50181675 | None:intergenic | 25.0% |
| !!! | TATAGTTTAGTTTCTGAAGT+TGG | - | chr4.2:50175830-50175849 | MS.gene98612:CDS | 25.0% |
| !!! | TGAGATGAAACTTTTTCTTT+TGG | - | chr4.2:50177811-50177830 | MS.gene98612:intron | 25.0% |
| !!! | TGGTTAATGTTTTTTGACTT+AGG | - | chr4.2:50177610-50177629 | MS.gene98612:CDS | 25.0% |
| !!! | TGTTTGGTGTTAGTATAATA+TGG | - | chr4.2:50176477-50176496 | MS.gene98612:CDS | 25.0% |
| !!! | TTCAATCAAAAGTGTTCATA+CGG | + | chr4.2:50176355-50176374 | None:intergenic | 25.0% |
| !!! | TTTCAGCTAAAAGTCTTTTT+TGG | + | chr4.2:50180752-50180771 | None:intergenic | 25.0% |
| !!! | TTTTAAAAACTGAAGCGAAA+CGG | + | chr4.2:50180057-50180076 | None:intergenic | 25.0% |
| AAAATTAAAAGCTTACCCTG+AGG | + | chr4.2:50180472-50180491 | None:intergenic | 30.0% | |
| AAAGGTAAAATCTTGTTGGT+TGG | - | chr4.2:50181360-50181379 | MS.gene98612:intron | 30.0% | |
| AAATCATCGCTGAAAAATAC+AGG | - | chr4.2:50180150-50180169 | MS.gene98612:CDS | 30.0% | |
| AAATGTCGATACTATCTACA+TGG | + | chr4.2:50176295-50176314 | None:intergenic | 30.0% | |
| AATGGCCATTTAATACAGTT+TGG | + | chr4.2:50180011-50180030 | None:intergenic | 30.0% | |
| AATTAATTCCTTGCATATGC+AGG | - | chr4.2:50178242-50178261 | MS.gene98612:CDS | 30.0% | |
| ACTGTTTACAAGAAAGAGTT+CGG | - | chr4.2:50178690-50178709 | MS.gene98612:CDS | 30.0% | |
| AGAACAATAGAGAGAGAAAA+AGG | - | chr4.2:50177142-50177161 | MS.gene98612:intron | 30.0% | |
| AGAATTTCAATGTGTACACA+TGG | - | chr4.2:50182118-50182137 | MS.gene98612:CDS | 30.0% | |
| AGCTAACAACAAAATTGGTT+CGG | - | chr4.2:50181417-50181436 | MS.gene98612:intron | 30.0% | |
| AGTAACCATCTATAAAACGA+TGG | + | chr4.2:50175631-50175650 | None:intergenic | 30.0% | |
| AGTCTGCAAAACAAATTGAA+CGG | + | chr4.2:50181536-50181555 | None:intergenic | 30.0% | |
| AGTGCCTATCATGATATATA+AGG | - | chr4.2:50176661-50176680 | MS.gene98612:CDS | 30.0% | |
| AGTTGATCAAAAGGTAAGAA+TGG | + | chr4.2:50180257-50180276 | None:intergenic | 30.0% | |
| ATATCTTGTGGACATAAACA+AGG | - | chr4.2:50178725-50178744 | MS.gene98612:intron | 30.0% | |
| CAAATAATCAAGACAATTGG+AGG | - | chr4.2:50181815-50181834 | MS.gene98612:intron | 30.0% | |
| CAGAAAAGGTAAAATCTTGT+TGG | - | chr4.2:50181356-50181375 | MS.gene98612:intron | 30.0% | |
| CATAAACAACCTAATGATCA+TGG | - | chr4.2:50182033-50182052 | MS.gene98612:intron | 30.0% | |
| CTCACTTAAGTTAAACAAGT+TGG | - | chr4.2:50180965-50180984 | MS.gene98612:intron | 30.0% | |
| GAAGAAGTAAGTACTCATAT+TGG | - | chr4.2:50179211-50179230 | MS.gene98612:intron | 30.0% | |
| GATGAGAGATTTCAATTTGT+AGG | - | chr4.2:50179791-50179810 | MS.gene98612:intron | 30.0% | |
| GATTCAAACATAATAACACC+TGG | - | chr4.2:50177389-50177408 | MS.gene98612:CDS | 30.0% | |
| GGTCAAATAATCAAGACAAT+TGG | - | chr4.2:50181812-50181831 | MS.gene98612:intron | 30.0% | |
| GTGCCTATCATGATATATAA+GGG | - | chr4.2:50176662-50176681 | MS.gene98612:CDS | 30.0% | |
| GTGCTTCATAGATTTCAAAT+AGG | + | chr4.2:50178059-50178078 | None:intergenic | 30.0% | |
| GTTACTCAACAAATATCCAA+AGG | - | chr4.2:50175645-50175664 | MS.gene98612:CDS | 30.0% | |
| GTTTGTAACATAATGCTAAG+AGG | - | chr4.2:50176057-50176076 | MS.gene98612:intron | 30.0% | |
| TAAAGCCAAAAGAGTTTCAT+TGG | + | chr4.2:50177992-50178011 | None:intergenic | 30.0% | |
| TAACACAAACACTTCAAATG+TGG | - | chr4.2:50175687-50175706 | MS.gene98612:CDS | 30.0% | |
| TAGAGTTTGAGAAGGAAAAA+GGG | + | chr4.2:50179705-50179724 | None:intergenic | 30.0% | |
| TATATTGCCTAATACTGCAA+GGG | - | chr4.2:50181474-50181493 | MS.gene98612:intron | 30.0% | |
| TCTCTTAGGATTGAAAAATG+AGG | + | chr4.2:50177883-50177902 | None:intergenic | 30.0% | |
| TGAAAACGACATAAATGAGA+CGG | - | chr4.2:50181561-50181580 | MS.gene98612:intron | 30.0% | |
| TGAAGAGTTATATCTCTTCA+AGG | - | chr4.2:50177444-50177463 | MS.gene98612:intron | 30.0% | |
| TGTATGCAAACTTCCATATA+TGG | - | chr4.2:50180725-50180744 | MS.gene98612:intron | 30.0% | |
| TGTATTAAATGGCCATTCAA+AGG | - | chr4.2:50180014-50180033 | MS.gene98612:intron | 30.0% | |
| TGTTGTTATCATCATTAGGA+TGG | + | chr4.2:50175762-50175781 | None:intergenic | 30.0% | |
| TTAATGTCTTCAAACACCTT+TGG | + | chr4.2:50175664-50175683 | None:intergenic | 30.0% | |
| TTAGAGACAGAAAATTGAGA+AGG | - | chr4.2:50178966-50178985 | MS.gene98612:intron | 30.0% | |
| TTATATTGCCTAATACTGCA+AGG | - | chr4.2:50181473-50181492 | MS.gene98612:intron | 30.0% | |
| TTCTCTAGGTATTATGATTG+CGG | - | chr4.2:50180655-50180674 | MS.gene98612:intron | 30.0% | |
| TTTGTATTTATAGGAAACCG+AGG | - | chr4.2:50177295-50177314 | MS.gene98612:intron | 30.0% | |
| ! | AAGAAAATTACCTCTTTTGG+GGG | + | chr4.2:50180292-50180311 | None:intergenic | 30.0% |
| ! | AAGATCAAAGACGAAGTTTT+TGG | + | chr4.2:50178466-50178485 | None:intergenic | 30.0% |
| ! | AAGATTTTACCTTTTCTGGA+AGG | + | chr4.2:50181354-50181373 | None:intergenic | 30.0% |
| ! | AATCCTAAGAGAGGTTATTT+TGG | - | chr4.2:50177891-50177910 | MS.gene98612:intron | 30.0% |
| ! | AGATCAAAGACGAAGTTTTT+GGG | + | chr4.2:50178465-50178484 | None:intergenic | 30.0% |
| ! | AGTCAGCAATATAATCGTTT+TGG | - | chr4.2:50181601-50181620 | MS.gene98612:intron | 30.0% |
| ! | ATCTTCATTTGTTTCTTTGC+TGG | - | chr4.2:50178507-50178526 | MS.gene98612:CDS | 30.0% |
| ! | CAACAAGATTTTACCTTTTC+TGG | + | chr4.2:50181358-50181377 | None:intergenic | 30.0% |
| ! | CACATAAAACCGACTTTAAT+TGG | + | chr4.2:50181667-50181686 | None:intergenic | 30.0% |
| ! | CATTTGAAGTGTTTGTGTTA+AGG | + | chr4.2:50175687-50175706 | None:intergenic | 30.0% |
| ! | CCCTAACTGTTTTCATATAA+TGG | + | chr4.2:50178849-50178868 | None:intergenic | 30.0% |
| ! | CTAATCCAATGAAACTCTTT+TGG | - | chr4.2:50177984-50178003 | MS.gene98612:CDS | 30.0% |
| ! | GAAATTCAGTTGAAGTTGAT+AGG | - | chr4.2:50180901-50180920 | MS.gene98612:intron | 30.0% |
| ! | GCGAATTTGATACTTTCTTT+TGG | + | chr4.2:50176151-50176170 | None:intergenic | 30.0% |
| ! | GTCAGCAATATAATCGTTTT+GGG | - | chr4.2:50181602-50181621 | MS.gene98612:intron | 30.0% |
| ! | GTGGAGAAAATAGTTCTATA+AGG | - | chr4.2:50176230-50176249 | MS.gene98612:CDS | 30.0% |
| !! | AATATTTGACTTGTATCCTC+AGG | - | chr4.2:50180453-50180472 | MS.gene98612:CDS | 30.0% |
| !! | AGGTTTTATCCATTCCATTA+TGG | - | chr4.2:50180170-50180189 | MS.gene98612:CDS | 30.0% |
| !! | ATATTTGACTTGTATCCTCA+GGG | - | chr4.2:50180454-50180473 | MS.gene98612:CDS | 30.0% |
| !! | CAATTAAAGTCGGTTTTATG+TGG | - | chr4.2:50181665-50181684 | MS.gene98612:intron | 30.0% |
| !! | CGACTTTAATTGGTCTATTT+TGG | + | chr4.2:50181657-50181676 | None:intergenic | 30.0% |
| !! | GTGAGAGTAAATTTTGAGAA+AGG | - | chr4.2:50180227-50180246 | MS.gene98612:intron | 30.0% |
| !! | GTTCTTCAATACTACTTTTC+AGG | - | chr4.2:50179843-50179862 | MS.gene98612:intron | 30.0% |
| !! | TCATTTTTCAATCCTAAGAG+AGG | - | chr4.2:50177882-50177901 | MS.gene98612:intron | 30.0% |
| !! | TGTTTGGTTCCATTTTGTTA+GGG | - | chr4.2:50178648-50178667 | MS.gene98612:CDS | 30.0% |
| !! | TTGCTACATTATTAAGTTGG+TGG | - | chr4.2:50177564-50177583 | MS.gene98612:CDS | 30.0% |
| !! | TTGTTTGGTTCCATTTTGTT+AGG | - | chr4.2:50178647-50178666 | MS.gene98612:CDS | 30.0% |
| !!! | AGTCTTTTTTGGTCCATATA+TGG | + | chr4.2:50180741-50180760 | None:intergenic | 30.0% |
| !!! | GCAAATTTTTTCTGCTAACT+TGG | + | chr4.2:50180946-50180965 | None:intergenic | 30.0% |
| !!! | TTTCCTTTTTAGCTCAATGT+CGG | + | chr4.2:50179621-50179640 | None:intergenic | 30.0% |
| AAACAACCTAATGATCATGG+AGG | - | chr4.2:50182036-50182055 | MS.gene98612:intron | 35.0% | |
| AACAAATGTAAAAGGCCTAC+AGG | + | chr4.2:50179402-50179421 | None:intergenic | 35.0% | |
| AACACGGTTCACTGTTTATA+TGG | - | chr4.2:50177725-50177744 | MS.gene98612:intron | 35.0% | |
| AACACTTCCACAAATGTTGT+TGG | + | chr4.2:50175883-50175902 | None:intergenic | 35.0% | |
| AACTAAACCCTTGCAGTATT+AGG | + | chr4.2:50181484-50181503 | None:intergenic | 35.0% | |
| AAGAAAGAGTTCGGTAAACT+TGG | - | chr4.2:50178699-50178718 | MS.gene98612:CDS | 35.0% | |
| ACAAATGTAAAAGGCCTACA+GGG | + | chr4.2:50179401-50179420 | None:intergenic | 35.0% | |
| ACCATAATACCCTTCCATAA+TGG | + | chr4.2:50177482-50177501 | None:intergenic | 35.0% | |
| ACCTCATGAATATCCAAAGA+TGG | + | chr4.2:50178555-50178574 | None:intergenic | 35.0% | |
| ACTAAAACTAGTCGAGTTAG+GGG | + | chr4.2:50181875-50181894 | None:intergenic | 35.0% | |
| ACTAAAGCAAACATTGGCAT+CGG | - | chr4.2:50178077-50178096 | MS.gene98612:intron | 35.0% | |
| ACTGAGGAAGGAATTTGAAA+TGG | - | chr4.2:50177325-50177344 | MS.gene98612:intron | 35.0% | |
| AGAATAGCAGTTGTCTATGT+TGG | + | chr4.2:50179736-50179755 | None:intergenic | 35.0% | |
| AGACTGAAGACAAACATTGT+CGG | + | chr4.2:50179188-50179207 | None:intergenic | 35.0% | |
| ATCAGTTGTGCATAAGCTTT+AGG | + | chr4.2:50180415-50180434 | None:intergenic | 35.0% | |
| CACTAAAACTAGTCGAGTTA+GGG | + | chr4.2:50181876-50181895 | None:intergenic | 35.0% | |
| CAGTCCAAGCATTATAAGAT+CGG | + | chr4.2:50177848-50177867 | None:intergenic | 35.0% | |
| CGCATATTCAACCTAACTAT+AGG | + | chr4.2:50178595-50178614 | None:intergenic | 35.0% | |
| CTTGCATATTTGGTTGTTGA+GGG | - | chr4.2:50178404-50178423 | MS.gene98612:intron | 35.0% | |
| GAACCAACATTCTAGATTGA+AGG | + | chr4.2:50178185-50178204 | None:intergenic | 35.0% | |
| GGATTGAAAAATGAGGTTCA+AGG | + | chr4.2:50177876-50177895 | None:intergenic | 35.0% | |
| GGTTCACTGTTTATATGGAT+CGG | - | chr4.2:50177730-50177749 | MS.gene98612:intron | 35.0% | |
| GTAGAGTTTGAGAAGGAAAA+AGG | + | chr4.2:50179706-50179725 | None:intergenic | 35.0% | |
| GTGATTCAAAGGATAGAAGT+CGG | - | chr4.2:50182187-50182206 | MS.gene98612:CDS | 35.0% | |
| GTTCAATCAAGGTTTCATCT+AGG | + | chr4.2:50179977-50179996 | None:intergenic | 35.0% | |
| GTTCATGCACCAAATTTCAA+AGG | - | chr4.2:50177418-50177437 | MS.gene98612:intron | 35.0% | |
| TAAACGTGTCAACCTTTGAA+TGG | + | chr4.2:50180029-50180048 | None:intergenic | 35.0% | |
| TAAACTTGGAGGATATCTTG+TGG | - | chr4.2:50178713-50178732 | MS.gene98612:CDS | 35.0% | |
| TAATCCATTCTTGAGTTCTC+TGG | + | chr4.2:50180775-50180794 | None:intergenic | 35.0% | |
| TATAAACAGTGAACCGTGTT+CGG | + | chr4.2:50177725-50177744 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr4.2:50176829-50176848 | MS.gene98612:intron | 35.0% | |
| TCAATTGCACCCTAACAAAA+TGG | + | chr4.2:50178660-50178679 | None:intergenic | 35.0% | |
| TCATCATTAGGATGGAAACA+TGG | + | chr4.2:50175754-50175773 | None:intergenic | 35.0% | |
| TCTTGCATATTTGGTTGTTG+AGG | - | chr4.2:50178403-50178422 | MS.gene98612:intron | 35.0% | |
| TGCAGCTTCTCATAATAGTT+AGG | + | chr4.2:50178273-50178292 | None:intergenic | 35.0% | |
| ! | AAAGAGAAGTTTTCTGTGGA+GGG | - | chr4.2:50179590-50179609 | MS.gene98612:intron | 35.0% |
| ! | AAAGGGGACTTGTTTAAAAC+TGG | - | chr4.2:50179343-50179362 | MS.gene98612:CDS | 35.0% |
| ! | ACAAGTTGGATACAAGCATA+AGG | - | chr4.2:50180979-50180998 | MS.gene98612:intron | 35.0% |
| ! | ACACCTTCAATCTAGAATGT+TGG | - | chr4.2:50178179-50178198 | MS.gene98612:intron | 35.0% |
| ! | AGGAAGGAATTTGAAATGGA+AGG | - | chr4.2:50177329-50177348 | MS.gene98612:intron | 35.0% |
| ! | GCTTGTGTTTTTCTCAAACA+GGG | - | chr4.2:50176756-50176775 | MS.gene98612:intron | 35.0% |
| ! | GTGTTCCATCGTTTTATAGA+TGG | - | chr4.2:50175623-50175642 | MS.gene98612:CDS | 35.0% |
| ! | TAAAGAGAAGTTTTCTGTGG+AGG | - | chr4.2:50179589-50179608 | MS.gene98612:intron | 35.0% |
| ! | TAGAACTATTTTCTCCACCT+TGG | + | chr4.2:50176228-50176247 | None:intergenic | 35.0% |
| ! | TAGGTTCAAAAGTACACTGA+AGG | - | chr4.2:50179810-50179829 | MS.gene98612:intron | 35.0% |
| ! | TGAAGCACTAAAGCAAACAT+TGG | - | chr4.2:50178071-50178090 | MS.gene98612:intron | 35.0% |
| ! | TGTGTCATGCATTTTATGAG+TGG | - | chr4.2:50180119-50180138 | MS.gene98612:CDS | 35.0% |
| !! | AACAACAAAATTGGTTCGGA+TGG | - | chr4.2:50181421-50181440 | MS.gene98612:intron | 35.0% |
| !! | AACTTTTTCTTTTGGTGTGC+AGG | - | chr4.2:50177819-50177838 | MS.gene98612:intron | 35.0% |
| !! | AATCAAAAGTGTTCATACGG+TGG | + | chr4.2:50176352-50176371 | None:intergenic | 35.0% |
| !! | AGCAATATAATCGTTTTGGG+AGG | - | chr4.2:50181605-50181624 | MS.gene98612:intron | 35.0% |
| !! | AGTTGAAGTTGATAGGTTGT+TGG | - | chr4.2:50180908-50180927 | MS.gene98612:intron | 35.0% |
| !! | GACACTTCACATTCTTGTTT+TGG | + | chr4.2:50177368-50177387 | None:intergenic | 35.0% |
| !! | TCCATTATGGAAGGGTATTA+TGG | - | chr4.2:50177478-50177497 | MS.gene98612:intron | 35.0% |
| !! | TCTTCAGAGCCTTTGAAATT+TGG | + | chr4.2:50177430-50177449 | None:intergenic | 35.0% |
| !!! | CGCTTCAGTTTTTAAAACAC+TGG | - | chr4.2:50180060-50180079 | MS.gene98612:intron | 35.0% |
| !!! | TATAATCGTTTTGGGAGGTA+CGG | - | chr4.2:50181610-50181629 | MS.gene98612:intron | 35.0% |
| !!! | TTTGTGTTTTTTAGCAGCGA+CGG | - | chr4.2:50181112-50181131 | MS.gene98612:intron | 35.0% |
| AAACAGTTAGGGGAGAAACA+TGG | - | chr4.2:50178857-50178876 | MS.gene98612:CDS | 40.0% | |
| AAACCAGAAAGGATCGATCA+TGG | - | chr4.2:50181973-50181992 | MS.gene98612:intron | 40.0% | |
| AAAGAGTTCGGTAAACTTGG+AGG | - | chr4.2:50178702-50178721 | MS.gene98612:CDS | 40.0% | |
| AACCAGAAAGGATCGATCAT+GGG | - | chr4.2:50181974-50181993 | MS.gene98612:intron | 40.0% | |
| ACATAAATGAGACGGTACTG+TGG | - | chr4.2:50181569-50181588 | MS.gene98612:intron | 40.0% | |
| ACTTCCACAAATGTTGTTGG+AGG | + | chr4.2:50175880-50175899 | None:intergenic | 40.0% | |
| AGCTTATGCACAACTGATGT+TGG | - | chr4.2:50180417-50180436 | MS.gene98612:CDS | 40.0% | |
| AGGCAGTTTGAACATGAACT+AGG | + | chr4.2:50179941-50179960 | None:intergenic | 40.0% | |
| ATATCCAAAGATGGCAAGTG+AGG | + | chr4.2:50178546-50178565 | None:intergenic | 40.0% | |
| ATCCTCTGATCCATTATGGA+AGG | - | chr4.2:50177469-50177488 | MS.gene98612:intron | 40.0% | |
| ATGCGAGGCTGAATTTATAG+GGG | + | chr4.2:50176200-50176219 | None:intergenic | 40.0% | |
| ATGCTAATGTTCCTGGAGAA+GGG | - | chr4.2:50177645-50177664 | MS.gene98612:intron | 40.0% | |
| ATTCAAAGGATAGAAGTCGG+TGG | - | chr4.2:50182190-50182209 | MS.gene98612:CDS | 40.0% | |
| CATGCGAGGCTGAATTTATA+GGG | + | chr4.2:50176201-50176220 | None:intergenic | 40.0% | |
| CATGTTCAGCATCTACTACA+TGG | - | chr4.2:50181322-50181341 | MS.gene98612:intron | 40.0% | |
| CCAATTCCAACAGCTCATTT+AGG | - | chr4.2:50182154-50182173 | MS.gene98612:CDS | 40.0% | |
| CCACTAAAACTAGTCGAGTT+AGG | + | chr4.2:50181877-50181896 | None:intergenic | 40.0% | |
| CCATTATGGTCCATTTGCTT+CGG | - | chr4.2:50180184-50180203 | MS.gene98612:intron | 40.0% | |
| CCATTTGCTTCGGACTTAAA+GGG | - | chr4.2:50180194-50180213 | MS.gene98612:intron | 40.0% | |
| CCTAAATGAGCTGTTGGAAT+TGG | + | chr4.2:50182157-50182176 | None:intergenic | 40.0% | |
| CTAAAACTAGTCGAGTTAGG+GGG | + | chr4.2:50181874-50181893 | None:intergenic | 40.0% | |
| GAAACCAGAGAACTCAAGAA+TGG | - | chr4.2:50180768-50180787 | MS.gene98612:intron | 40.0% | |
| GAATCAATTCACAAAGGAGC+TGG | - | chr4.2:50181925-50181944 | MS.gene98612:CDS | 40.0% | |
| GATGCCGATCTTATAATGCT+TGG | - | chr4.2:50177841-50177860 | MS.gene98612:intron | 40.0% | |
| GATTAAACCTTGAACCGCTT+TGG | + | chr4.2:50178306-50178325 | None:intergenic | 40.0% | |
| GCCACGCAAGTTATTGTATA+TGG | - | chr4.2:50175948-50175967 | MS.gene98612:CDS | 40.0% | |
| GCCATCTTTGGATATTCATG+AGG | - | chr4.2:50178551-50178570 | MS.gene98612:intron | 40.0% | |
| GGATATCCTCTGATCCATTA+TGG | - | chr4.2:50177465-50177484 | MS.gene98612:intron | 40.0% | |
| GTCGCGTATGTTTCATTGTT+TGG | - | chr4.2:50178632-50178651 | MS.gene98612:CDS | 40.0% | |
| GTGCCAAAATAACCTCTCTT+AGG | + | chr4.2:50177897-50177916 | None:intergenic | 40.0% | |
| GTTGGATACAAGCATAAGGT+TGG | - | chr4.2:50180983-50181002 | MS.gene98612:intron | 40.0% | |
| TAAAACGTCTAGTCCTTTGC+TGG | + | chr4.2:50176962-50176981 | None:intergenic | 40.0% | |
| TACACGCATTTCTTCGTCTT+TGG | + | chr4.2:50176991-50177010 | None:intergenic | 40.0% | |
| TACGATCCTCCATGATCATT+AGG | + | chr4.2:50182045-50182064 | None:intergenic | 40.0% | |
| TACTCCTCCAACAACATTTG+TGG | - | chr4.2:50175873-50175892 | MS.gene98612:CDS | 40.0% | |
| TAGTGTCAGACATTGACATG+TGG | - | chr4.2:50178151-50178170 | MS.gene98612:intron | 40.0% | |
| TATAACATTAGGGGCCTGTT+TGG | + | chr4.2:50176846-50176865 | None:intergenic | 40.0% | |
| TCATTCATAAGGAAACAGCG+TGG | - | chr4.2:50177683-50177702 | MS.gene98612:intron | 40.0% | |
| TCCATTTGCTTCGGACTTAA+AGG | - | chr4.2:50180193-50180212 | MS.gene98612:intron | 40.0% | |
| TCCTCTGATCCATTATGGAA+GGG | - | chr4.2:50177470-50177489 | MS.gene98612:intron | 40.0% | |
| TCCTGATTATGATCCGAACA+CGG | - | chr4.2:50177709-50177728 | MS.gene98612:intron | 40.0% | |
| TCCTTTGAATCACTCCATTG+AGG | + | chr4.2:50182180-50182199 | None:intergenic | 40.0% | |
| TGGAGATTTCTTGACTGACA+AGG | - | chr4.2:50179363-50179382 | MS.gene98612:CDS | 40.0% | |
| TGGAGGAATTCAAGTAGAGA+AGG | - | chr4.2:50181832-50181851 | MS.gene98612:intron | 40.0% | |
| TGGTGTAAACCTTCCAGAAA+AGG | - | chr4.2:50181342-50181361 | MS.gene98612:intron | 40.0% | |
| TTAGCTGATGCTAATGTTCC+TGG | - | chr4.2:50177638-50177657 | MS.gene98612:CDS | 40.0% | |
| TTATGCATTCATGGACTCAC+TGG | - | chr4.2:50179050-50179069 | MS.gene98612:intron | 40.0% | |
| ! | ATATGCGTCAAGTGTTGTGT+CGG | + | chr4.2:50180612-50180631 | None:intergenic | 40.0% |
| ! | ATTTTATGTTCCCCTTCTCC+AGG | + | chr4.2:50177659-50177678 | None:intergenic | 40.0% |
| ! | CGCTTGTGTTTTTCTCAAAC+AGG | - | chr4.2:50176755-50176774 | MS.gene98612:intron | 40.0% |
| ! | GCAAATGGACCATAATGGAA+TGG | + | chr4.2:50180182-50180201 | None:intergenic | 40.0% |
| ! | GCCATATACAATAACTTGCG+TGG | + | chr4.2:50175952-50175971 | None:intergenic | 40.0% |
| ! | GCTCCTTTGTGAATTGATTC+CGG | + | chr4.2:50181925-50181944 | None:intergenic | 40.0% |
| ! | GTTGATAGGTTGTTGGTTAG+TGG | - | chr4.2:50180915-50180934 | MS.gene98612:intron | 40.0% |
| !! | AATTGGTTCGGATGGACAAA+AGG | - | chr4.2:50181429-50181448 | MS.gene98612:intron | 40.0% |
| !! | ACTTTTCAGGAGTTGCTTCA+TGG | - | chr4.2:50179856-50179875 | MS.gene98612:intron | 40.0% |
| !! | TCAAAGACGAAGTTTTTGGG+AGG | + | chr4.2:50178462-50178481 | None:intergenic | 40.0% |
| !!! | CCTAACTCGACTAGTTTTAG+TGG | - | chr4.2:50181874-50181893 | MS.gene98612:CDS | 40.0% |
| !!! | GGTATTCACTTTTTCCCTGT+AGG | - | chr4.2:50179384-50179403 | MS.gene98612:CDS | 40.0% |
| AAAGGATAGAAGTCGGTGGT+AGG | - | chr4.2:50182194-50182213 | MS.gene98612:CDS | 45.0% | |
| AAATACGAGCATCCTGTTGG+TGG | - | chr4.2:50181292-50181311 | MS.gene98612:intron | 45.0% | |
| AAATGCTCCAAAGCGGTTCA+AGG | - | chr4.2:50178296-50178315 | MS.gene98612:intron | 45.0% | |
| AAGGATAGAAGTCGGTGGTA+GGG | - | chr4.2:50182195-50182214 | MS.gene98612:CDS | 45.0% | |
| ACAGCTCATTTAGGCCTCAA+TGG | - | chr4.2:50182163-50182182 | MS.gene98612:CDS | 45.0% | |
| ACCGTGTTCGGATCATAATC+AGG | + | chr4.2:50177713-50177732 | None:intergenic | 45.0% | |
| AGTACACTGAAGGATTGCTG+TGG | - | chr4.2:50179820-50179839 | MS.gene98612:intron | 45.0% | |
| ATCCCATGATCGATCCTTTC+TGG | + | chr4.2:50181979-50181998 | None:intergenic | 45.0% | |
| ATGACGCAACAAGCTGTTGA+CGG | + | chr4.2:50181732-50181751 | None:intergenic | 45.0% | |
| ATTCACAAAGGAGCTGGTGT+TGG | - | chr4.2:50181931-50181950 | MS.gene98612:CDS | 45.0% | |
| CCCTTTAAGTCCGAAGCAAA+TGG | + | chr4.2:50180197-50180216 | None:intergenic | 45.0% | |
| CCGAAGCAAATGGACCATAA+TGG | + | chr4.2:50180187-50180206 | None:intergenic | 45.0% | |
| CCTCCGGAATCAATTCACAA+AGG | - | chr4.2:50181919-50181938 | MS.gene98612:CDS | 45.0% | |
| CGCTTTCGTAGAGTTTGAGA+AGG | + | chr4.2:50179713-50179732 | None:intergenic | 45.0% | |
| GAATTTATAGGGGACCACCT+CGG | + | chr4.2:50176190-50176209 | None:intergenic | 45.0% | |
| GAGCGAAAATGAACCAGCAA+AGG | - | chr4.2:50176946-50176965 | MS.gene98612:intron | 45.0% | |
| GATGCTAATGTTCCTGGAGA+AGG | - | chr4.2:50177644-50177663 | MS.gene98612:intron | 45.0% | |
| GCATGCGAGGCTGAATTTAT+AGG | + | chr4.2:50176202-50176221 | None:intergenic | 45.0% | |
| GCCTCAATGGAGTGATTCAA+AGG | - | chr4.2:50182176-50182195 | MS.gene98612:CDS | 45.0% | |
| GCTTGCAGCTCTTGCATATT+TGG | - | chr4.2:50178394-50178413 | MS.gene98612:intron | 45.0% | |
| GTACACTGAAGGATTGCTGT+GGG | - | chr4.2:50179821-50179840 | MS.gene98612:intron | 45.0% | |
| GTCAAATACGAGCATCCTGT+TGG | - | chr4.2:50181289-50181308 | MS.gene98612:intron | 45.0% | |
| TAAGTGTTCTCCCCCAAAAG+AGG | - | chr4.2:50180279-50180298 | MS.gene98612:intron | 45.0% | |
| TCTACCTCACTTGCCATCTT+TGG | - | chr4.2:50178539-50178558 | MS.gene98612:intron | 45.0% | |
| TGCAACCAAATGCTCCAAAG+CGG | - | chr4.2:50178289-50178308 | MS.gene98612:intron | 45.0% | |
| TGCTAATGTTCCTGGAGAAG+GGG | - | chr4.2:50177646-50177665 | MS.gene98612:intron | 45.0% | |
| TGTCAGACATTGACATGTGG+CGG | - | chr4.2:50178154-50178173 | MS.gene98612:intron | 45.0% | |
| TTGAGGCCTAAATGAGCTGT+TGG | + | chr4.2:50182163-50182182 | None:intergenic | 45.0% | |
| ! | ACTACTGGTTGTAGCGTGTT+TGG | - | chr4.2:50176461-50176480 | MS.gene98612:intron | 45.0% |
| ! | CCTTTGTGAATTGATTCCGG+AGG | + | chr4.2:50181922-50181941 | None:intergenic | 45.0% |
| ! | CTTTTCACGAAATGCACCTC+CGG | - | chr4.2:50181903-50181922 | MS.gene98612:CDS | 45.0% |
| !! | ACCCTTCCATAATGGATCAG+AGG | + | chr4.2:50177474-50177493 | None:intergenic | 45.0% |
| !! | TAGAAGGAAAGCGCTTCATG+TGG | - | chr4.2:50180566-50180585 | MS.gene98612:intron | 45.0% |
| !! | TTGAACCGCTTTGGAGCATT+TGG | + | chr4.2:50178297-50178316 | None:intergenic | 45.0% |
| !!! | CCTTTTTAGCTCAATGTCGG+CGG | + | chr4.2:50179618-50179637 | None:intergenic | 45.0% |
| !!! | TTTTTTAGCAGCGACGGCAT+TGG | - | chr4.2:50181118-50181137 | MS.gene98612:intron | 45.0% |
| !! | TAATATAGAAAAATAAATAA+GGG | + | chr4.2:50178778-50178797 | None:intergenic | 5.0% |
| !! | TTAATATAGAAAAATAAATA+AGG | + | chr4.2:50178779-50178798 | None:intergenic | 5.0% |
| !!! | AATATTTTTTTTGTATTTAT+AGG | - | chr4.2:50177286-50177305 | MS.gene98612:intron | 5.0% |
| AAACCGAGGAAGAGAGACTG+AGG | - | chr4.2:50177309-50177328 | MS.gene98612:intron | 50.0% | |
| AGGCACATCCTGCATATGCA+AGG | + | chr4.2:50178253-50178272 | None:intergenic | 50.0% | |
| CACTATCTTGTAGCCAACCG+AGG | - | chr4.2:50176170-50176189 | MS.gene98612:intron | 50.0% | |
| CAGGAGTTGCTTCATGGACA+TGG | - | chr4.2:50179862-50179881 | MS.gene98612:intron | 50.0% | |
| CAGGCAGAGGAAAACCAGAA+AGG | - | chr4.2:50181962-50181981 | MS.gene98612:intron | 50.0% | |
| CATTAGGGGCCTGTTTGGAT+TGG | + | chr4.2:50176841-50176860 | None:intergenic | 50.0% | |
| CCGCCGACATTGAGCTAAAA+AGG | - | chr4.2:50179615-50179634 | MS.gene98612:intron | 50.0% | |
| CTTCCTCAGTCTCTCTTCCT+CGG | + | chr4.2:50177315-50177334 | None:intergenic | 50.0% | |
| GGTTCGGATGGACAAAAGGA+AGG | - | chr4.2:50181433-50181452 | MS.gene98612:intron | 50.0% | |
| TATCTTGTAGCCAACCGAGG+TGG | - | chr4.2:50176173-50176192 | MS.gene98612:intron | 50.0% | |
| TGCTTCGGACTTAAAGGGCA+TGG | - | chr4.2:50180199-50180218 | MS.gene98612:intron | 50.0% | |
| TGTCGTTCTCAACACACTCG+TGG | + | chr4.2:50181162-50181181 | None:intergenic | 50.0% | |
| ! | AAAGGAGCTGGTGTTGGATG+GGG | - | chr4.2:50181937-50181956 | MS.gene98612:CDS | 50.0% |
| ! | ACAAAGGAGCTGGTGTTGGA+TGG | - | chr4.2:50181935-50181954 | MS.gene98612:CDS | 50.0% |
| ! | CAAAGGAGCTGGTGTTGGAT+GGG | - | chr4.2:50181936-50181955 | MS.gene98612:CDS | 50.0% |
| !!! | TGCTGGTTCATTTTCGCTCG+TGG | + | chr4.2:50176945-50176964 | None:intergenic | 50.0% |
| ACATGACGCGTACCACCAAC+AGG | + | chr4.2:50181307-50181326 | None:intergenic | 55.0% | |
| CGAGGAAGAGAGACTGAGGA+AGG | - | chr4.2:50177313-50177332 | MS.gene98612:intron | 55.0% | |
| TCAGCCTCGCATGCAAACCA+AGG | - | chr4.2:50176208-50176227 | MS.gene98612:CDS | 55.0% | |
| TGGTGCATGAACTCAGTCCC+AGG | + | chr4.2:50177410-50177429 | None:intergenic | 55.0% | |
| TTATAGGGGACCACCTCGGT+TGG | + | chr4.2:50176186-50176205 | None:intergenic | 55.0% | |
| ! | CAACGTTCGAGTGCGCCTTT+TGG | - | chr4.2:50182072-50182091 | MS.gene98612:CDS | 55.0% |
| ! | CTTTTGGTCGTGGACGAGGT+CGG | - | chr4.2:50182088-50182107 | MS.gene98612:CDS | 55.0% |
| ! | TTAGCAGCGACGGCATTGGA+GGG | - | chr4.2:50181122-50181141 | MS.gene98612:intron | 55.0% |
| ! | TTTAGCAGCGACGGCATTGG+AGG | - | chr4.2:50181121-50181140 | MS.gene98612:intron | 55.0% |
| !! | AGGAAAGCGCTTCATGTGGC+AGG | - | chr4.2:50180570-50180589 | MS.gene98612:intron | 55.0% |
| !! | TCCACCTTGGTTTGCATGCG+AGG | + | chr4.2:50176215-50176234 | None:intergenic | 55.0% |
| CGACCTCGTCCACGACCAAA+AGG | + | chr4.2:50182090-50182109 | None:intergenic | 60.0% | |
| GCCTCGCATGCAAACCAAGG+TGG | - | chr4.2:50176211-50176230 | MS.gene98612:CDS | 60.0% | |
| GTTGGATGGGGTTCAGGCAG+AGG | - | chr4.2:50181949-50181968 | MS.gene98612:intron | 60.0% | |
| ! | GCTGGTGTTGGATGGGGTTC+AGG | - | chr4.2:50181943-50181962 | MS.gene98612:CDS | 60.0% |
| ! | TCGAGTGCGCCTTTTGGTCG+TGG | - | chr4.2:50182078-50182097 | MS.gene98612:CDS | 60.0% |
| ! | GCGCCTTTTGGTCGTGGACG+AGG | - | chr4.2:50182084-50182103 | MS.gene98612:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 50175619 | 50182215 | 50175619 | ID=MS.gene98612 |
| chr4.2 | mRNA | 50175619 | 50182215 | 50175619 | ID=MS.gene98612.t1;Parent=MS.gene98612 |
| chr4.2 | exon | 50182048 | 50182215 | 50182048 | ID=MS.gene98612.t1.exon1;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50182048 | 50182215 | 50182048 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50181858 | 50181963 | 50181858 | ID=MS.gene98612.t1.exon2;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50181858 | 50181963 | 50181858 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50180827 | 50180903 | 50180827 | ID=MS.gene98612.t1.exon3;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50180827 | 50180903 | 50180827 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50180335 | 50180526 | 50180335 | ID=MS.gene98612.t1.exon4;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50180335 | 50180526 | 50180335 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50180083 | 50180202 | 50180083 | ID=MS.gene98612.t1.exon5;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50180083 | 50180202 | 50180083 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50179931 | 50179993 | 50179931 | ID=MS.gene98612.t1.exon6;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50179931 | 50179993 | 50179931 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50179517 | 50179570 | 50179517 | ID=MS.gene98612.t1.exon7;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50179517 | 50179570 | 50179517 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50179262 | 50179432 | 50179262 | ID=MS.gene98612.t1.exon8;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50179262 | 50179432 | 50179262 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50179088 | 50179165 | 50179088 | ID=MS.gene98612.t1.exon9;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50179088 | 50179165 | 50179088 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50178822 | 50178971 | 50178822 | ID=MS.gene98612.t1.exon10;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50178822 | 50178971 | 50178822 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50178618 | 50178737 | 50178618 | ID=MS.gene98612.t1.exon11;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50178618 | 50178737 | 50178618 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50178450 | 50178545 | 50178450 | ID=MS.gene98612.t1.exon12;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50178450 | 50178545 | 50178450 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50178188 | 50178283 | 50178188 | ID=MS.gene98612.t1.exon13;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50178188 | 50178283 | 50178188 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50177951 | 50178021 | 50177951 | ID=MS.gene98612.t1.exon14;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50177951 | 50178021 | 50177951 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50177534 | 50177662 | 50177534 | ID=MS.gene98612.t1.exon15;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50177534 | 50177662 | 50177534 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50177359 | 50177435 | 50177359 | ID=MS.gene98612.t1.exon16;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50177359 | 50177435 | 50177359 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50177243 | 50177283 | 50177243 | ID=MS.gene98612.t1.exon17;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50177243 | 50177283 | 50177243 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50177037 | 50177111 | 50177037 | ID=MS.gene98612.t1.exon18;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50177037 | 50177111 | 50177037 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50176834 | 50176949 | 50176834 | ID=MS.gene98612.t1.exon19;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50176834 | 50176949 | 50176834 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50176634 | 50176705 | 50176634 | ID=MS.gene98612.t1.exon20;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50176634 | 50176705 | 50176634 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50176471 | 50176549 | 50176471 | ID=MS.gene98612.t1.exon21;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50176471 | 50176549 | 50176471 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50176208 | 50176281 | 50176208 | ID=MS.gene98612.t1.exon22;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50176208 | 50176281 | 50176208 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| chr4.2 | exon | 50175619 | 50176021 | 50175619 | ID=MS.gene98612.t1.exon23;Parent=MS.gene98612.t1 |
| chr4.2 | CDS | 50175619 | 50176021 | 50175619 | ID=cds.MS.gene98612.t1;Parent=MS.gene98612.t1 |
| Gene Sequence |
| Protein sequence |
