AlfalfaGEDB | MS.gene062944

M. sativa cultivar XinJiangDaYe / MS.gene062944

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062944.t1	RHN61395.1	84.9	93	10	1	1	89	139	231	1.50E-36	161.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062944.t1	P33079	71.0	93	23	1	1	89	1	93	1.5e-32	139.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062944.t1	G7JL24	84.9	93	10	1	1	89	1	93	1.1e-36	161.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062944	MS.gene031199	PPI
MS.gene062944	MS.gene50687	PPI
MS.gene50675	MS.gene062944	PPI
MS.gene062944	MS.gene014223	PPI
MS.gene062944	MS.gene79885	PPI
MS.gene01358	MS.gene062944	PPI
MS.gene057790	MS.gene062944	PPI
MS.gene40326	MS.gene062944	PPI
MS.gene062952	MS.gene062944	PPI
MS.gene50676	MS.gene062944	PPI
MS.gene23370	MS.gene062944	PPI
MS.gene77529	MS.gene062944	PPI
MS.gene014667	MS.gene062944	PPI
MS.gene003594	MS.gene062944	PPI
MS.gene062944	MS.gene014670	PPI
MS.gene50665	MS.gene062944	PPI
MS.gene062944	MS.gene045368	PPI
MS.gene003586	MS.gene062944	PPI
MS.gene057778	MS.gene062944	PPI
MS.gene062988	MS.gene062944	PPI
MS.gene75673	MS.gene062944	PPI
MS.gene062944	MS.gene75314	PPI
MS.gene062944	MS.gene01764	PPI
MS.gene045366	MS.gene062944	PPI
MS.gene062963	MS.gene062944	PPI
MS.gene062944	MS.gene75679	PPI
MS.gene50763	MS.gene062944	PPI
MS.gene045365	MS.gene062944	PPI
MS.gene062944	MS.gene68760	PPI
MS.gene23372	MS.gene062944	PPI
MS.gene062944	MS.gene031198	PPI
MS.gene50659	MS.gene062944	PPI
MS.gene062944	MS.gene057797	PPI
MS.gene75316	MS.gene062944	PPI
MS.gene062944	MS.gene003614	PPI
MS.gene062944	MS.gene50764	PPI
MS.gene062944	MS.gene77528	PPI
MS.gene062944	MS.gene014671	PPI
MS.gene062944	MS.gene003596	PPI
MS.gene003624	MS.gene062944	PPI
MS.gene062944	MS.gene003577	PPI
MS.gene062944	MS.gene23371	PPI
MS.gene031201	MS.gene062944	PPI
MS.gene062944	MS.gene75672	PPI
MS.gene062944	MS.gene50654	PPI
MS.gene062944	MS.gene062974	PPI
MS.gene062944	MS.gene003583	PPI
MS.gene062944	MS.gene062951	PPI
MS.gene062944	MS.gene057801	PPI
MS.gene062944	MS.gene77527	PPI
MS.gene062944	MS.gene77524	PPI
MS.gene062944	MS.gene057795	PPI
MS.gene062944	MS.gene68162	PPI
MS.gene045362	MS.gene062944	PPI
MS.gene062944	MS.gene045363	PPI
MS.gene062944	MS.gene75675	PPI
MS.gene77523	MS.gene062944	PPI
MS.gene062944	MS.gene79887	PPI
MS.gene062944	MS.gene50652	PPI
MS.gene062944	MS.gene68761	PPI
MS.gene062944	MS.gene40325	PPI
MS.gene062944	MS.gene68165	PPI
MS.gene75674	MS.gene062944	PPI
MS.gene79890	MS.gene062944	PPI
MS.gene003615	MS.gene062944	PPI
MS.gene062973	MS.gene062944	PPI
MS.gene062944	MS.gene50684	PPI
MS.gene003602	MS.gene062944	PPI
MS.gene047517	MS.gene062944	PPI
MS.gene003627	MS.gene062944	PPI
MS.gene062944	MS.gene014668	PPI
MS.gene062944	MS.gene79886	PPI
MS.gene062944	MS.gene50765	PPI
MS.gene062984	MS.gene062944	PPI
MS.gene40327	MS.gene062944	PPI
MS.gene062944	MS.gene79891	PPI
MS.gene062944	MS.gene045367	PPI
MS.gene062944	MS.gene045364	PPI
MS.gene003591	MS.gene062944	PPI
MS.gene003587	MS.gene062944	PPI
MS.gene062979	MS.gene062944	PPI
MS.gene003590	MS.gene062944	PPI
MS.gene062943	MS.gene062944	PPI
MS.gene063112	MS.gene062944	PPI
MS.gene062944	MS.gene014669	PPI
MS.gene062944	MS.gene057808	PPI
MS.gene062944	MS.gene002380	PPI
MS.gene003608	MS.gene062944	PPI
MS.gene77526	MS.gene062944	PPI
MS.gene045360	MS.gene062944	PPI
MS.gene062944	MS.gene68163	PPI
MS.gene062944	MS.gene75315	PPI
MS.gene50766	MS.gene062944	PPI
MS.gene062944	MS.gene057818	PPI
MS.gene062944	MS.gene68164	PPI
MS.gene062944	MS.gene68759	PPI
MS.gene062944	MS.gene79889	PPI
MS.gene75677	MS.gene062944	PPI
MS.gene50677	MS.gene062944	PPI
MS.gene003625	MS.gene062944	PPI
MS.gene062944	MS.gene031200	PPI
MS.gene062944	MS.gene014222	PPI
MS.gene062944	MS.gene79888	PPI
MS.gene062944	MS.gene75676	PPI
MS.gene062944	MS.gene75678	PPI
MS.gene045361	MS.gene062944	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062944.t1	MTR_4g072260	84.946	93	10	1	1	89	1	93	2.38e-53	161
MS.gene062944.t1	MTR_4g072870	84.615	91	10	1	1	87	1	91	1.04e-52	159
MS.gene062944.t1	MTR_4g072220	81.720	93	13	1	1	89	1	93	1.09e-50	154
MS.gene062944.t1	MTR_4g072890	82.418	91	12	1	1	87	1	91	1.62e-50	154
MS.gene062944.t1	MTR_4g072240	76.923	91	17	1	1	87	1	91	2.27e-48	148
MS.gene062944.t1	MTR_4g072300	75.824	91	18	1	1	87	1	91	5.65e-47	145
MS.gene062944.t1	MTR_4g072580	74.713	87	20	1	1	87	1	85	5.70e-44	137
MS.gene062944.t1	MTR_4g072370	71.591	88	24	1	1	87	1	88	8.02e-44	137
MS.gene062944.t1	MTR_3g110038	69.565	92	25	1	1	89	1	92	4.66e-43	135
MS.gene062944.t1	MTR_4g072330	68.182	88	27	1	1	87	1	88	4.70e-42	132
MS.gene062944.t1	MTR_4g072310	65.591	93	28	1	1	89	1	93	7.71e-42	132
MS.gene062944.t1	MTR_4g072470	71.264	87	23	1	1	87	1	85	7.92e-42	132
MS.gene062944.t1	MTR_4g072740	71.264	87	23	1	1	87	1	85	1.56e-41	131
MS.gene062944.t1	MTR_3g084240	66.304	92	28	1	1	89	1	92	2.88e-41	130
MS.gene062944.t1	MTR_4g072880	68.132	91	25	1	1	87	1	91	3.24e-41	130
MS.gene062944.t1	MTR_4g072820	74.419	86	20	2	1	86	1	84	4.57e-41	130
MS.gene062944.t1	MTR_3g084170	66.304	92	28	1	1	89	1	92	1.17e-40	129
MS.gene062944.t1	MTR_4g072490	68.966	87	25	1	1	87	1	85	4.16e-40	127
MS.gene062944.t1	MTR_4g072630	67.816	87	27	1	1	87	1	86	4.42e-40	127
MS.gene062944.t1	MTR_4g072830	68.182	88	27	1	1	87	1	88	6.47e-40	127
MS.gene062944.t1	MTR_3g084150	64.516	93	28	2	1	89	1	92	3.30e-39	125
MS.gene062944.t1	MTR_4g072600	70.115	87	24	1	1	87	1	85	3.47e-39	125
MS.gene062944.t1	MTR_4g072500	63.441	93	29	2	1	89	1	92	4.84e-39	125
MS.gene062944.t1	MTR_4g072610	66.667	87	26	1	1	87	1	84	6.58e-39	124
MS.gene062944.t1	MTR_4g072650	72.414	87	21	2	1	87	1	84	1.03e-38	124
MS.gene062944.t1	MTR_4g072850	65.957	94	27	1	1	89	1	94	1.30e-38	124
MS.gene062944.t1	MTR_3g084180	63.441	93	29	2	1	89	1	92	1.99e-38	123
MS.gene062944.t1	MTR_4g072230	64.516	93	27	2	1	89	1	91	2.38e-38	123
MS.gene062944.t1	MTR_8g461410	62.366	93	30	2	1	89	1	92	2.62e-38	123
MS.gene062944.t1	MTR_3g084220	63.043	92	31	1	1	89	1	92	2.96e-38	123
MS.gene062944.t1	MTR_4g072730	62.222	90	31	1	1	87	1	90	3.93e-38	122
MS.gene062944.t1	MTR_4g072270	63.441	93	30	1	1	89	1	93	4.18e-38	122
MS.gene062944.t1	MTR_4g072250	63.736	91	28	2	1	87	1	90	7.11e-38	122
MS.gene062944.t1	MTR_4g072570	62.766	94	28	2	1	89	1	92	9.14e-38	122
MS.gene062944.t1	MTR_4g072540	66.667	87	28	1	1	87	1	86	9.15e-38	121
MS.gene062944.t1	MTR_4g072860	62.366	93	31	1	1	89	1	93	1.29e-37	121
MS.gene062944.t1	MTR_4g050700	62.366	93	31	1	1	89	1	93	1.92e-37	121
MS.gene062944.t1	MTR_2g012410	62.366	93	31	1	1	89	1	93	1.92e-37	121
MS.gene062944.t1	MTR_4g072640	63.043	92	29	2	1	88	1	91	1.99e-37	121
MS.gene062944.t1	MTR_4g072480	62.766	94	28	2	1	89	1	92	2.17e-37	120
MS.gene062944.t1	MTR_4g072530	62.637	91	29	2	1	87	1	90	2.19e-37	120
MS.gene062944.t1	MTR_3g117630	66.265	83	24	1	11	89	10	92	2.86e-37	120
MS.gene062944.t1	MTR_3g084250	64.516	93	28	2	1	89	1	92	4.39e-37	120
MS.gene062944.t1	MTR_4g072620	60.638	94	30	2	1	89	1	92	1.16e-36	119
MS.gene062944.t1	MTR_3g110032	61.290	93	32	1	1	89	1	93	1.43e-36	119
MS.gene062944.t1	MTR_3g110042	64.444	90	27	2	1	86	1	89	1.79e-36	119
MS.gene062944.t1	MTR_4g072670	64.368	87	30	1	1	87	1	86	2.30e-36	118
MS.gene062944.t1	MTR_4g072510	65.517	87	29	1	1	87	1	86	2.43e-36	118
MS.gene062944.t1	MTR_3g084260	61.538	91	31	1	1	87	1	91	3.01e-36	118
MS.gene062944.t1	MTR_4g072660	61.798	89	32	1	1	89	1	87	3.55e-36	117
MS.gene062944.t1	MTR_4g072380	66.667	84	27	1	1	84	1	83	5.10e-36	117
MS.gene062944.t1	MTR_3g084190	65.217	92	29	1	1	89	1	92	5.65e-36	117
MS.gene062944.t1	MTR_4g072720	64.368	87	30	1	1	87	1	86	8.21e-36	116
MS.gene062944.t1	MTR_4g072465	59.770	87	34	1	1	87	1	86	8.96e-36	116
MS.gene062944.t1	MTR_4g072680	60.638	94	30	2	1	89	1	92	1.07e-35	116
MS.gene062944.t1	MTR_4g072940	73.913	69	18	0	21	89	56	124	2.52e-35	116
MS.gene062944.t1	MTR_5g008370	67.073	82	25	1	8	87	9	90	2.54e-35	117
MS.gene062944.t1	MTR_8g461420	63.043	92	31	1	1	89	1	92	3.68e-35	115
MS.gene062944.t1	MTR_4g072690	68.966	87	25	1	1	87	1	85	8.43e-35	114
MS.gene062944.t1	MTR_3g084230	61.957	92	32	1	1	89	1	92	1.64e-34	113
MS.gene062944.t1	MTR_4g072590	62.069	87	31	1	1	87	1	85	1.65e-34	113
MS.gene062944.t1	MTR_4g072460	59.574	94	31	2	1	89	1	92	1.65e-34	113
MS.gene062944.t1	MTR_3g084210	61.957	92	32	1	1	89	1	92	3.72e-34	112
MS.gene062944.t1	MTR_3g084160	63.043	92	31	1	1	89	1	92	1.03e-33	111
MS.gene062944.t1	MTR_3g110045	71.014	69	20	0	21	89	83	151	1.72e-33	113
MS.gene062944.t1	MTR_5g008360	62.195	82	29	1	8	89	4	83	6.54e-33	109
MS.gene062944.t1	MTR_5g008350	68.421	76	22	1	1	76	1	74	1.09e-32	108
MS.gene062944.t1	MTR_4g072450	65.517	87	28	1	1	87	1	85	3.51e-32	107
MS.gene062944.t1	MTR_4g072550	68.116	69	22	0	21	89	35	103	7.00e-32	107
MS.gene062944.t1	MTR_4g072910	67.164	67	22	0	21	87	34	100	2.28e-31	106
MS.gene062944.t1	MTR_4g072280	69.333	75	19	1	1	71	1	75	2.70e-31	105
MS.gene062944.t1	MTR_4g072980	54.348	92	36	2	1	86	1	92	4.56e-31	105
MS.gene062944.t1	MTR_4g072770	66.667	66	22	0	22	87	15	80	1.77e-30	103
MS.gene062944.t1	MTR_4g072560	65.672	67	22	1	21	86	31	97	3.25e-30	103
MS.gene062944.t1	MTR_3g117640	65.672	67	22	1	21	86	33	99	3.36e-30	103
MS.gene062944.t1	MTR_3g084200	63.889	72	23	1	1	69	1	72	1.43e-29	101
MS.gene062944.t1	MTR_4g072290	55.056	89	30	1	1	89	1	79	2.40e-28	97.8
MS.gene062944.t1	MTR_4g072750	63.636	66	24	0	4	69	9	74	2.71e-27	95.1
MS.gene062944.t1	MTR_4g072930	57.143	77	29	1	15	87	34	110	6.02e-27	95.1
MS.gene062944.t1	MTR_3g110035	65.152	66	23	0	24	89	73	138	1.56e-25	92.4
MS.gene062944.t1	MTR_3g113310	56.716	67	28	1	20	86	40	105	1.09e-24	89.4
MS.gene062944.t1	MTR_3g117610	58.462	65	26	1	20	84	43	106	1.43e-23	86.7
MS.gene062944.t1	MTR_4g072190	55.072	69	30	1	18	86	32	99	4.11e-23	85.1
MS.gene062944.t1	MTR_6g077850	53.731	67	31	0	21	87	33	99	1.41e-22	84.0
MS.gene062944.t1	MTR_8g076040	50.000	80	32	2	12	84	24	102	5.37e-22	82.4
MS.gene062944.t1	MTR_5g021820	46.667	90	39	3	5	86	15	103	1.05e-21	81.6
MS.gene062944.t1	MTR_4g072840	55.814	86	11	3	1	86	1	59	4.40e-20	76.3
MS.gene062944.t1	MTR_2g043960	59.322	59	23	1	21	79	75	132	2.43e-18	74.7
MS.gene062944.t1	MTR_4g124750	56.250	64	27	1	21	84	68	130	2.82e-18	74.3
MS.gene062944.t1	MTR_8g461400	44.565	92	22	2	1	89	1	66	2.84e-18	72.0
MS.gene062944.t1	MTR_4g005310	52.381	63	29	1	21	82	61	123	2.14e-17	72.0
MS.gene062944.t1	MTR_4g025830	45.833	72	35	2	19	87	76	146	4.77e-16	68.9
MS.gene062944.t1	MTR_1g094750	44.118	68	37	1	21	88	49	115	1.49e-15	66.2
MS.gene062944.t1	MTR_4g072160	48.438	64	32	1	19	82	34	96	3.20e-15	66.2
MS.gene062944.t1	MTR_1g009150	53.448	58	26	1	22	79	71	127	3.32e-15	67.0
MS.gene062944.t1	MTR_3g092220	50.820	61	27	2	21	79	32	91	1.88e-14	63.5
MS.gene062944.t1	MTR_1g024085	50.847	59	28	1	21	79	36	93	2.12e-14	64.3
MS.gene062944.t1	MTR_0388s0020	36.905	84	46	3	10	87	60	142	2.14e-14	64.3
MS.gene062944.t1	MTR_7g118010	47.143	70	33	3	16	82	16	84	2.29e-14	63.2
MS.gene062944.t1	MTR_4g005320	52.830	53	24	1	22	74	70	121	2.81e-14	64.3
MS.gene062944.t1	MTR_1g061570	51.786	56	26	1	21	76	18	72	8.47e-14	62.0
MS.gene062944.t1	MTR_3g109160	53.448	58	26	1	22	79	69	125	9.99e-14	63.2
MS.gene062944.t1	MTR_7g101740	45.312	64	34	1	21	84	39	101	1.29e-13	61.2
MS.gene062944.t1	MTR_3g097120	40.506	79	38	2	18	88	5	82	2.58e-13	60.5
MS.gene062944.t1	MTR_1g063950	41.935	62	35	1	21	82	47	107	3.06e-13	60.5
MS.gene062944.t1	MTR_8g026730	46.667	60	29	2	22	79	27	85	3.08e-13	60.1
MS.gene062944.t1	MTR_8g461210	45.161	62	33	1	18	79	31	91	3.11e-13	60.5
MS.gene062944.t1	MTR_4g021810	45.455	77	35	4	4	79	13	83	1.83e-12	58.2
MS.gene062944.t1	MTR_1g059770	39.062	64	38	1	23	86	50	112	4.46e-12	57.8
MS.gene062944.t1	MTR_7g104950	40.323	62	36	1	25	86	53	113	6.35e-12	57.4
MS.gene062944.t1	MTR_2g066830	38.095	63	38	1	12	74	48	109	9.86e-12	57.4
MS.gene062944.t1	MTR_7g405740	45.000	60	32	1	23	82	68	126	1.00e-11	57.8
MS.gene062944.t1	MTR_3g105900	63.889	36	13	0	21	56	1171	1206	1.30e-11	58.9
MS.gene062944.t1	MTR_8g094980	38.272	81	36	2	21	88	2	81	3.48e-11	55.1
MS.gene062944.t1	MTR_3g098970	32.143	84	53	2	9	89	37	119	5.20e-11	55.5
MS.gene062944.t1	MTR_7g104940	38.710	62	37	1	25	86	53	113	5.67e-11	55.1
MS.gene062944.t1	MTR_8g101520	42.424	66	37	1	23	88	51	115	6.56e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062944.t1	AT4G38840	70.588	68	19	1	21	87	32	99	1.24e-32	109
MS.gene062944.t1	AT2G21210	67.123	73	22	1	17	87	23	95	3.26e-32	108
MS.gene062944.t1	AT2G21210	67.123	73	22	1	17	87	90	162	1.28e-31	108
MS.gene062944.t1	AT5G18030	62.162	74	27	1	14	86	14	87	3.25e-31	105
MS.gene062944.t1	AT5G18080	64.000	75	26	1	13	86	15	89	6.71e-31	104
MS.gene062944.t1	AT5G18020	61.333	75	28	1	13	86	15	89	1.91e-30	103
MS.gene062944.t1	AT5G18060	67.692	65	20	1	23	86	25	89	3.28e-30	102
MS.gene062944.t1	AT5G18010	62.667	75	27	1	13	86	15	89	3.55e-30	102
MS.gene062944.t1	AT5G18050	66.154	65	21	1	23	86	25	89	6.48e-30	102
MS.gene062944.t1	AT4G38825	66.154	65	21	1	23	86	24	88	2.95e-29	100
MS.gene062944.t1	AT2G21200	55.556	81	35	1	7	86	6	86	1.14e-28	99.0
MS.gene062944.t1	AT4G34770	63.291	79	26	2	12	87	24	102	1.79e-28	99.0
MS.gene062944.t1	AT3G03840	66.667	66	20	1	23	86	28	93	2.54e-28	98.2
MS.gene062944.t1	AT4G34800	51.765	85	37	2	1	82	1	84	1.93e-27	95.9
MS.gene062944.t1	AT4G38850	61.194	67	23	1	23	86	22	88	2.05e-27	95.9
MS.gene062944.t1	AT3G03820	65.672	67	20	1	23	86	28	94	3.13e-27	95.5
MS.gene062944.t1	AT3G03850	63.636	66	22	1	23	86	26	91	8.71e-27	94.4
MS.gene062944.t1	AT4G34810	59.155	71	24	2	21	86	47	117	8.77e-27	95.1
MS.gene062944.t1	AT3G03830	62.687	67	22	1	23	86	25	91	2.03e-26	93.2
MS.gene062944.t1	AT4G13790	51.282	78	35	2	11	86	15	91	3.62e-25	90.1
MS.gene062944.t1	AT4G34790	60.000	65	24	1	22	84	39	103	8.24e-25	89.7
MS.gene062944.t1	AT4G38860	55.224	67	30	0	20	86	38	104	7.95e-24	87.0
MS.gene062944.t1	AT4G34780	57.143	70	27	2	21	87	27	96	5.71e-23	85.1
MS.gene062944.t1	AT1G75580	58.209	67	27	1	20	86	42	107	1.02e-22	84.3
MS.gene062944.t1	AT2G21220	46.341	82	36	2	12	86	23	103	4.91e-22	82.4
MS.gene062944.t1	AT4G34760	53.731	67	30	1	20	86	41	106	6.92e-22	82.4
MS.gene062944.t1	AT1G19830	55.224	67	29	1	20	86	46	111	4.01e-21	80.5
MS.gene062944.t1	AT2G16580	53.846	65	29	1	20	84	42	105	3.09e-19	75.5
MS.gene062944.t1	AT3G43120	57.627	59	24	1	21	79	78	135	5.93e-19	76.3
MS.gene062944.t1	AT4G36110	53.125	64	29	1	21	84	39	101	8.75e-19	74.3
MS.gene062944.t1	AT2G18010	53.125	64	29	1	21	84	47	109	2.65e-18	73.2
MS.gene062944.t1	AT5G20810	59.322	59	23	1	21	79	78	135	5.53e-18	73.9
MS.gene062944.t1	AT5G20810	58.333	60	24	1	20	79	77	135	1.15e-17	73.6
MS.gene062944.t1	AT3G20220	50.769	65	30	2	22	85	47	110	7.68e-17	69.7
MS.gene062944.t1	AT5G66260	51.515	66	31	1	22	87	34	98	7.73e-17	69.3
MS.gene062944.t1	AT1G75590	48.529	68	34	1	12	79	32	98	2.32e-16	69.3
MS.gene062944.t1	AT3G51200	47.945	73	35	3	12	82	28	99	1.38e-15	66.2
MS.gene062944.t1	AT1G19840	47.059	68	35	1	12	79	31	97	2.23e-14	64.3
MS.gene062944.t1	AT2G37030	44.444	63	34	1	21	83	48	109	2.50e-14	63.5
MS.gene062944.t1	AT5G10990	44.118	68	37	1	12	79	31	97	4.86e-14	63.2
MS.gene062944.t1	AT5G53590	41.096	73	37	2	21	88	45	116	7.52e-14	62.8
MS.gene062944.t1	AT2G45210	40.580	69	37	2	22	87	79	146	1.28e-13	62.4
MS.gene062944.t1	AT4G31320	53.226	62	26	2	13	74	73	131	1.47e-13	62.8
MS.gene062944.t1	AT3G53250	42.857	63	32	1	21	83	51	109	2.17e-13	61.2
MS.gene062944.t1	AT3G53250	42.857	63	32	1	21	83	82	140	2.81e-13	61.6
MS.gene062944.t1	AT3G60690	42.647	68	35	2	22	86	88	154	2.92e-13	61.6
MS.gene062944.t1	AT4G12410	44.928	69	34	2	22	87	76	143	3.28e-13	61.2
MS.gene062944.t1	AT3G12830	42.466	73	38	2	2	74	33	101	4.47e-13	60.5
MS.gene062944.t1	AT4G09530	44.444	63	32	2	23	82	29	91	8.49e-13	58.9
MS.gene062944.t1	AT4G34750	44.068	59	32	1	21	79	36	93	1.36e-12	59.7
MS.gene062944.t1	AT4G34750	44.068	59	32	1	21	79	36	93	1.36e-12	59.7
MS.gene062944.t1	AT2G24400	51.724	58	27	1	22	79	64	120	1.65e-12	60.1
MS.gene062944.t1	AT4G00880	50.820	61	27	2	21	79	27	86	1.90e-12	58.5
MS.gene062944.t1	AT2G46690	43.548	62	31	2	21	79	23	83	2.26e-12	58.5
MS.gene062944.t1	AT3G61900	44.286	70	35	2	13	79	21	89	2.54e-12	58.5
MS.gene062944.t1	AT4G22620	40.580	69	37	2	22	87	79	146	1.25e-11	57.4
MS.gene062944.t1	AT3G03847	52.830	53	23	2	30	82	80	130	6.33e-11	55.1
MS.gene062944.t1	AT1G56150	45.283	53	28	1	22	74	38	89	9.03e-11	53.9

Find 22 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCAAGCAGAAGAAGAATT+TGG	0.271748	4.2:+35653861	MS.gene062944:CDS
GATTTCAAATCCCTGAGTTT+TGG	0.289111	4.2:-35653742	None:intergenic
TAGACTGCAAGATAGCCTTT+TGG	0.386300	4.2:-35653765	None:intergenic
GGCTGGCTCAAATATGATAC+TGG	0.405573	4.2:-35653819	None:intergenic
GGCTATCTTGCAGTCTATGT+TGG	0.480274	4.2:+35653771	MS.gene062944:CDS
TGATGCCCTTGTGGTAATAC+CGG	0.503182	4.2:-35653715	None:intergenic
GTAATTCTTGAAACGATGGC+TGG	0.519820	4.2:-35653836	None:intergenic
CAGGGATTTGAAATCCCAAA+AGG	0.541078	4.2:+35653750	MS.gene062944:CDS
TTTGGATATGATCATCCAAT+GGG	0.541874	4.2:+35653879	MS.gene062944:CDS
AGAATGGGTTTCCGCATAGC+CGG	0.550842	4.2:+35653696	None:intergenic
ATTTGGATATGATCATCCAA+TGG	0.556875	4.2:+35653878	MS.gene062944:CDS
TTTAGTAATTCTTGAAACGA+TGG	0.570741	4.2:-35653840	None:intergenic
GGAATTGTAAGACCACCCAT+TGG	0.603707	4.2:-35653894	None:intergenic
TCTATGTTGGAGATAGAATG+AGG	0.630157	4.2:+35653784	MS.gene062944:CDS
AAGAAAGCATCTTCACCGCA+AGG	0.631158	4.2:-35653915	None:intergenic
TTTGGAAAATGATGCCCTTG+TGG	0.638586	4.2:-35653724	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.655640	4.2:+35653882	MS.gene062944:CDS
GCATAGCCGGTATTACCACA+AGG	0.668124	4.2:+35653709	MS.gene062944:CDS
GGTGGTCTTACAATTCCTTG+CGG	0.688498	4.2:+35653900	MS.gene062944:CDS
TTGTGGTAATACCGGCTATG+CGG	0.715207	4.2:-35653707	None:intergenic
CATAGCCGGTATTACCACAA+GGG	0.738270	4.2:+35653710	MS.gene062944:CDS
ATGTTGGAGATAGAATGAGG+CGG	0.759369	4.2:+35653787	MS.gene062944:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTTAGTAATTCTTGAAACGA+TGG	-	chr4.2:35653843-35653862	None:intergenic	25.0%
	AATCAAGCAGAAGAAGAATT+TGG	+	chr4.2:35653861-35653880	MS.gene062944:CDS	30.0%
	ATTTGGATATGATCATCCAA+TGG	+	chr4.2:35653878-35653897	MS.gene062944:CDS	30.0%
	TTTGGATATGATCATCCAAT+GGG	+	chr4.2:35653879-35653898	MS.gene062944:CDS	30.0%
	TCTATGTTGGAGATAGAATG+AGG	+	chr4.2:35653784-35653803	MS.gene062944:CDS	35.0%
!	GATTTCAAATCCCTGAGTTT+TGG	-	chr4.2:35653745-35653764	None:intergenic	35.0%
!	GCATCATTTTCCAAAACTCA+GGG	+	chr4.2:35653732-35653751	MS.gene062944:CDS	35.0%
	ATGTTGGAGATAGAATGAGG+CGG	+	chr4.2:35653787-35653806	MS.gene062944:CDS	40.0%
	GTAATTCTTGAAACGATGGC+TGG	-	chr4.2:35653839-35653858	None:intergenic	40.0%
	TTTGGAAAATGATGCCCTTG+TGG	-	chr4.2:35653727-35653746	None:intergenic	40.0%
!	AGACTGCAAGATAGCCTTTT+GGG	-	chr4.2:35653767-35653786	None:intergenic	40.0%
!	CAGGGATTTGAAATCCCAAA+AGG	+	chr4.2:35653750-35653769	MS.gene062944:CDS	40.0%
!	GGCATCATTTTCCAAAACTC+AGG	+	chr4.2:35653731-35653750	MS.gene062944:CDS	40.0%
!	TAGACTGCAAGATAGCCTTT+TGG	-	chr4.2:35653768-35653787	None:intergenic	40.0%
	CATAGCCGGTATTACCACAA+GGG	+	chr4.2:35653710-35653729	MS.gene062944:CDS	45.0%
	GGAATTGTAAGACCACCCAT+TGG	-	chr4.2:35653897-35653916	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	+	chr4.2:35653882-35653901	MS.gene062944:CDS	45.0%
	GGCTATCTTGCAGTCTATGT+TGG	+	chr4.2:35653771-35653790	MS.gene062944:CDS	45.0%
	TGATGCCCTTGTGGTAATAC+CGG	-	chr4.2:35653718-35653737	None:intergenic	45.0%
!	GGCTGGCTCAAATATGATAC+TGG	-	chr4.2:35653822-35653841	None:intergenic	45.0%
!	GGTGGTCTTACAATTCCTTG+CGG	+	chr4.2:35653900-35653919	MS.gene062944:CDS	45.0%
!	TTGTGGTAATACCGGCTATG+CGG	-	chr4.2:35653710-35653729	None:intergenic	45.0%
!!	AAGAAAGCATCTTCACCGCA+AGG	-	chr4.2:35653918-35653937	None:intergenic	45.0%
	GCATAGCCGGTATTACCACA+AGG	+	chr4.2:35653709-35653728	MS.gene062944:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35653699	35653968	35653699	ID=MS.gene062944
chr4.2	mRNA	35653699	35653968	35653699	ID=MS.gene062944.t1;Parent=MS.gene062944
chr4.2	exon	35653699	35653968	35653699	ID=MS.gene062944.t1.exon1;Parent=MS.gene062944.t1
chr4.2	CDS	35653699	35653968	35653699	ID=cds.MS.gene062944.t1;Parent=MS.gene062944.t1

Gene Sequence	>MS.gene062944 ATGGGTTTCCGCATAGCCGGTATTACCACAAGGGCATCATTTTCCAAAACTCAGGGATTTGAAATCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAGAATGAGGCGGTTCGTGATTCCAGTATCATATTTGAGCCAGCCATCGTTTCAAGAATTACTAAATCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTTACAATTCCTTGCGGTGAAGATGCTTTCTTACAACTCACTTCTCGCTTAAGTGAGTTGTAA
Protein sequence	>MS.gene062944.t1 MGFRIAGITTRASFSKTQGFEIPKGYLAVYVGDRMRRFVIPVSYLSQPSFQELLNQAEEEFGYDHPMGGLTIPCGEDAFLQLTSRLSEL