AlfalfaGEDB | MS.gene062946

M. sativa cultivar XinJiangDaYe / MS.gene062946

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062946.t1	XP_003607107.1	90.3	93	9	0	1	93	1	93	4.20E-42	180.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062946.t1	P33083	79.1	91	18	1	1	91	1	90	2.3e-36	152.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062946.t1	G7JL29	90.3	93	9	0	1	93	1	93	3.1e-42	180.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062946	MS.gene79885	PPI
MS.gene062946	MS.gene003587	PPI
MS.gene062946	MS.gene047517	PPI
MS.gene062946	MS.gene01358	PPI
MS.gene062946	MS.gene062963	PPI
MS.gene062946	MS.gene063112	PPI
MS.gene062946	MS.gene003602	PPI
MS.gene062946	MS.gene062984	PPI
MS.gene062946	MS.gene50675	PPI
MS.gene062946	MS.gene014670	PPI
MS.gene062946	MS.gene062943	PPI
MS.gene062946	MS.gene045368	PPI
MS.gene062946	MS.gene23370	PPI
MS.gene062946	MS.gene40327	PPI
MS.gene062946	MS.gene045361	PPI
MS.gene062946	MS.gene50659	PPI
MS.gene062946	MS.gene75314	PPI
MS.gene062946	MS.gene01764	PPI
MS.gene062946	MS.gene75679	PPI
MS.gene062946	MS.gene75673	PPI
MS.gene062946	MS.gene057778	PPI
MS.gene062946	MS.gene50763	PPI
MS.gene062946	MS.gene68760	PPI
MS.gene062946	MS.gene031198	PPI
MS.gene062946	MS.gene50676	PPI
MS.gene062946	MS.gene057797	PPI
MS.gene062946	MS.gene003614	PPI
MS.gene062946	MS.gene50764	PPI
MS.gene062946	MS.gene77528	PPI
MS.gene062946	MS.gene75316	PPI
MS.gene062946	MS.gene014671	PPI
MS.gene062946	MS.gene003596	PPI
MS.gene062946	MS.gene003615	PPI
MS.gene062946	MS.gene003577	PPI
MS.gene062946	MS.gene23371	PPI
MS.gene062946	MS.gene003594	PPI
MS.gene062946	MS.gene75672	PPI
MS.gene062946	MS.gene75674	PPI
MS.gene062946	MS.gene50654	PPI
MS.gene062946	MS.gene062974	PPI
MS.gene062946	MS.gene031201	PPI
MS.gene062946	MS.gene062951	PPI
MS.gene062946	MS.gene057801	PPI
MS.gene062946	MS.gene77527	PPI
MS.gene062946	MS.gene77524	PPI
MS.gene062946	MS.gene057795	PPI
MS.gene062946	MS.gene68162	PPI
MS.gene062946	MS.gene75675	PPI
MS.gene062946	MS.gene79887	PPI
MS.gene062946	MS.gene50652	PPI
MS.gene062946	MS.gene68761	PPI
MS.gene062946	MS.gene77529	PPI
MS.gene062946	MS.gene40325	PPI
MS.gene062946	MS.gene68165	PPI
MS.gene062946	MS.gene75677	PPI
MS.gene062946	MS.gene50677	PPI
MS.gene062946	MS.gene79890	PPI
MS.gene062946	MS.gene50684	PPI
MS.gene062946	MS.gene045362	PPI
MS.gene062946	MS.gene23372	PPI
MS.gene062946	MS.gene014668	PPI
MS.gene062946	MS.gene79886	PPI
MS.gene062946	MS.gene50765	PPI
MS.gene062946	MS.gene014667	PPI
MS.gene062946	MS.gene062988	PPI
MS.gene062946	MS.gene003624	PPI
MS.gene062946	MS.gene003586	PPI
MS.gene062946	MS.gene003627	PPI
MS.gene062946	MS.gene003583	PPI
MS.gene062946	MS.gene003590	PPI
MS.gene062946	MS.gene003608	PPI
MS.gene062946	MS.gene003591	PPI
MS.gene062946	MS.gene79891	PPI
MS.gene062946	MS.gene045367	PPI
MS.gene062946	MS.gene045364	PPI
MS.gene062946	MS.gene50665	PPI
MS.gene062946	MS.gene045363	PPI
MS.gene062946	MS.gene062973	PPI
MS.gene062946	MS.gene014669	PPI
MS.gene062946	MS.gene057808	PPI
MS.gene062946	MS.gene002380	PPI
MS.gene062946	MS.gene77526	PPI
MS.gene062946	MS.gene77523	PPI
MS.gene062946	MS.gene045366	PPI
MS.gene062946	MS.gene045365	PPI
MS.gene062946	MS.gene68163	PPI
MS.gene062946	MS.gene057790	PPI
MS.gene062946	MS.gene75315	PPI
MS.gene062946	MS.gene062952	PPI
MS.gene062946	MS.gene057818	PPI
MS.gene062946	MS.gene68164	PPI
MS.gene062946	MS.gene062979	PPI
MS.gene062946	MS.gene68759	PPI
MS.gene062946	MS.gene79889	PPI
MS.gene062946	MS.gene031200	PPI
MS.gene062946	MS.gene045360	PPI
MS.gene062946	MS.gene014222	PPI
MS.gene062946	MS.gene79888	PPI
MS.gene062946	MS.gene75676	PPI
MS.gene062946	MS.gene40326	PPI
MS.gene062946	MS.gene75678	PPI
MS.gene062946	MS.gene031199	PPI
MS.gene062946	MS.gene50687	PPI
MS.gene062946	MS.gene014223	PPI
MS.gene062946	MS.gene003625	PPI
MS.gene062946	MS.gene50766	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062946.t1	MTR_4g072310	90.323	93	9	0	1	93	1	93	2.51e-61	181
MS.gene062946.t1	MTR_4g072880	84.946	93	14	0	1	93	1	93	8.01e-59	175
MS.gene062946.t1	MTR_4g072230	89.247	93	8	1	1	93	1	91	4.13e-58	173
MS.gene062946.t1	MTR_4g072270	86.022	93	13	0	1	93	1	93	6.11e-58	173
MS.gene062946.t1	MTR_4g072250	83.871	93	14	1	1	93	1	92	1.42e-55	167
MS.gene062946.t1	MTR_4g072860	84.946	93	14	0	1	93	1	93	2.92e-55	166
MS.gene062946.t1	MTR_4g072500	76.344	93	21	1	1	93	1	92	9.67e-51	154
MS.gene062946.t1	MTR_3g084150	74.194	93	23	1	1	93	1	92	1.44e-49	152
MS.gene062946.t1	MTR_3g084170	75.269	93	22	1	1	93	1	92	4.66e-49	150
MS.gene062946.t1	MTR_3g084180	73.118	93	24	1	1	93	1	92	1.15e-48	149
MS.gene062946.t1	MTR_4g072530	74.725	91	22	1	1	91	1	90	1.87e-48	149
MS.gene062946.t1	MTR_4g072640	75.824	91	21	1	1	91	1	90	3.43e-48	148
MS.gene062946.t1	MTR_4g072680	75.269	93	22	1	1	93	1	92	3.87e-48	148
MS.gene062946.t1	MTR_3g084240	74.194	93	23	1	1	93	1	92	4.00e-48	148
MS.gene062946.t1	MTR_8g461410	72.043	93	25	1	1	93	1	92	4.27e-48	148
MS.gene062946.t1	MTR_4g072460	75.269	93	22	1	1	93	1	92	4.98e-48	148
MS.gene062946.t1	MTR_4g072480	73.118	93	24	1	1	93	1	92	1.27e-47	147
MS.gene062946.t1	MTR_3g110032	70.968	93	27	0	1	93	1	93	1.59e-47	146
MS.gene062946.t1	MTR_4g050700	72.043	93	26	0	1	93	1	93	1.63e-47	146
MS.gene062946.t1	MTR_2g012410	72.043	93	26	0	1	93	1	93	1.63e-47	146
MS.gene062946.t1	MTR_4g072570	75.269	93	22	1	1	93	1	92	2.05e-47	146
MS.gene062946.t1	MTR_4g072850	77.660	94	20	1	1	93	1	94	2.93e-47	146
MS.gene062946.t1	MTR_4g072240	70.330	91	27	0	1	91	1	91	3.16e-47	145
MS.gene062946.t1	MTR_4g072620	72.043	93	25	1	1	93	1	92	4.78e-47	145
MS.gene062946.t1	MTR_3g084220	72.043	93	25	1	1	93	1	92	9.75e-47	144
MS.gene062946.t1	MTR_3g117630	77.647	85	19	0	9	93	8	92	2.83e-46	143
MS.gene062946.t1	MTR_4g072370	75.824	91	19	1	1	91	1	88	3.14e-46	143
MS.gene062946.t1	MTR_3g110038	72.043	93	25	1	1	93	1	92	5.96e-46	142
MS.gene062946.t1	MTR_4g072730	70.652	92	26	1	1	92	1	91	1.31e-45	142
MS.gene062946.t1	MTR_4g072870	68.132	91	29	0	1	91	1	91	1.79e-45	141
MS.gene062946.t1	MTR_4g072580	74.725	91	17	1	1	91	1	85	5.50e-45	140
MS.gene062946.t1	MTR_4g072300	67.033	91	30	0	1	91	1	91	8.99e-45	139
MS.gene062946.t1	MTR_4g072220	65.591	93	32	0	1	93	1	93	1.46e-44	139
MS.gene062946.t1	MTR_3g084250	67.742	93	29	1	1	93	1	92	3.57e-44	138
MS.gene062946.t1	MTR_3g110042	72.222	90	24	1	1	90	1	89	8.24e-44	137
MS.gene062946.t1	MTR_4g072740	72.527	91	19	1	1	91	1	85	1.22e-43	136
MS.gene062946.t1	MTR_4g072290	70.968	93	13	1	1	93	1	79	1.24e-43	136
MS.gene062946.t1	MTR_4g072330	69.231	91	25	1	1	91	1	88	1.39e-43	136
MS.gene062946.t1	MTR_3g084260	66.667	93	31	0	1	93	1	93	1.45e-43	136
MS.gene062946.t1	MTR_4g072830	73.333	90	21	1	1	90	1	87	1.46e-43	136
MS.gene062946.t1	MTR_4g072490	71.429	91	20	1	1	91	1	85	1.92e-43	136
MS.gene062946.t1	MTR_4g072260	64.516	93	33	0	1	93	1	93	3.41e-43	135
MS.gene062946.t1	MTR_4g072890	65.934	91	31	0	1	91	1	91	3.59e-43	135
MS.gene062946.t1	MTR_4g072470	73.626	91	18	1	1	91	1	85	6.06e-43	135
MS.gene062946.t1	MTR_5g008360	77.215	79	18	0	15	93	5	83	1.77e-42	133
MS.gene062946.t1	MTR_4g072940	71.739	92	25	1	3	93	33	124	3.70e-42	134
MS.gene062946.t1	MTR_5g008370	72.632	95	19	2	1	92	1	91	4.13e-42	134
MS.gene062946.t1	MTR_4g072660	66.667	93	25	1	1	93	1	87	1.08e-41	132
MS.gene062946.t1	MTR_4g072610	70.330	91	20	1	1	91	1	84	3.74e-41	130
MS.gene062946.t1	MTR_3g084210	68.817	93	28	1	1	93	1	92	9.83e-41	129
MS.gene062946.t1	MTR_3g084190	69.892	93	27	1	1	93	1	92	1.12e-40	129
MS.gene062946.t1	MTR_4g072650	70.330	91	20	2	1	91	1	84	8.16e-40	127
MS.gene062946.t1	MTR_8g461420	69.231	91	27	1	1	91	1	90	1.24e-39	126
MS.gene062946.t1	MTR_4g072630	65.934	91	26	1	1	91	1	86	2.26e-39	125
MS.gene062946.t1	MTR_4g072540	67.033	91	25	1	1	91	1	86	3.21e-39	125
MS.gene062946.t1	MTR_4g072600	67.033	91	24	1	1	91	1	85	3.24e-39	125
MS.gene062946.t1	MTR_3g084230	69.231	91	27	1	1	91	1	90	3.96e-39	125
MS.gene062946.t1	MTR_4g072820	67.391	92	22	2	1	91	1	85	4.27e-39	125
MS.gene062946.t1	MTR_4g072465	65.934	91	26	1	1	91	1	86	5.81e-39	125
MS.gene062946.t1	MTR_3g084160	66.667	93	30	1	1	93	1	92	8.08e-39	124
MS.gene062946.t1	MTR_4g072550	71.250	80	22	1	15	93	24	103	2.60e-38	124
MS.gene062946.t1	MTR_4g072670	67.033	91	25	1	1	91	1	86	2.73e-38	123
MS.gene062946.t1	MTR_3g110045	70.330	91	26	1	3	93	62	151	2.80e-38	125
MS.gene062946.t1	MTR_4g072380	68.132	91	24	2	1	91	1	86	6.19e-38	122
MS.gene062946.t1	MTR_4g072590	69.231	91	22	1	1	91	1	85	2.43e-37	120
MS.gene062946.t1	MTR_4g072720	77.143	70	16	0	22	91	17	86	2.88e-37	120
MS.gene062946.t1	MTR_4g072510	63.736	91	28	1	1	91	1	86	3.67e-36	117
MS.gene062946.t1	MTR_5g008350	67.500	80	20	1	1	80	1	74	4.46e-34	112
MS.gene062946.t1	MTR_4g072560	55.102	98	37	3	1	91	1	98	9.66e-34	112
MS.gene062946.t1	MTR_3g084200	68.493	73	22	1	1	73	1	72	1.15e-33	112
MS.gene062946.t1	MTR_4g072450	64.835	91	26	1	1	91	1	85	3.41e-33	110
MS.gene062946.t1	MTR_4g072690	63.736	91	27	1	1	91	1	85	4.02e-33	110
MS.gene062946.t1	MTR_4g072910	58.511	94	33	2	4	91	7	100	7.04e-33	110
MS.gene062946.t1	MTR_4g072980	54.737	95	41	2	1	93	1	95	4.30e-32	107
MS.gene062946.t1	MTR_4g072770	71.212	66	19	0	26	91	15	80	6.14e-31	104
MS.gene062946.t1	MTR_4g072750	68.000	75	21	2	1	73	1	74	2.98e-30	102
MS.gene062946.t1	MTR_3g117640	65.217	69	23	1	25	92	33	101	3.06e-30	103
MS.gene062946.t1	MTR_3g110035	60.256	78	30	1	16	93	62	138	2.52e-29	102
MS.gene062946.t1	MTR_4g072280	56.000	75	33	0	1	75	1	75	3.25e-27	95.1
MS.gene062946.t1	MTR_3g113310	59.701	67	26	1	24	90	40	105	1.13e-26	94.4
MS.gene062946.t1	MTR_6g077850	48.864	88	44	1	4	91	13	99	1.64e-26	94.0
MS.gene062946.t1	MTR_8g461400	52.688	93	17	2	1	93	1	66	3.30e-26	92.0
MS.gene062946.t1	MTR_3g117610	63.077	65	23	1	24	88	43	106	1.04e-25	92.4
MS.gene062946.t1	MTR_4g072190	61.194	67	25	1	24	90	34	99	2.07e-25	91.3
MS.gene062946.t1	MTR_4g072930	55.072	69	27	1	27	91	42	110	9.81e-23	84.7
MS.gene062946.t1	MTR_5g021820	56.061	66	28	1	25	90	39	103	1.98e-22	83.6
MS.gene062946.t1	MTR_8g076040	57.812	64	26	1	25	88	40	102	3.15e-22	83.2
MS.gene062946.t1	MTR_4g072840	50.000	92	13	3	1	91	1	60	2.13e-20	77.4
MS.gene062946.t1	MTR_2g043960	51.613	62	29	1	25	86	75	135	6.73e-17	71.2
MS.gene062946.t1	MTR_1g024085	51.429	70	30	2	15	84	29	94	9.00e-17	70.5
MS.gene062946.t1	MTR_4g124750	50.000	64	31	1	25	88	68	130	1.27e-16	70.1
MS.gene062946.t1	MTR_3g092220	48.485	66	31	2	21	84	28	92	5.49e-16	67.8
MS.gene062946.t1	MTR_4g005310	47.887	71	33	2	17	86	56	123	6.68e-16	68.6
MS.gene062946.t1	MTR_4g025830	44.118	68	34	2	26	90	79	145	8.95e-16	68.2
MS.gene062946.t1	MTR_1g094750	42.500	80	41	2	11	86	31	109	9.92e-16	67.0
MS.gene062946.t1	MTR_7g118010	45.588	68	34	2	26	91	23	89	1.05e-15	66.6
MS.gene062946.t1	MTR_1g061570	47.059	68	35	1	25	92	18	84	2.56e-15	66.2
MS.gene062946.t1	MTR_1g009150	51.613	62	29	1	25	86	70	130	3.38e-15	67.0
MS.gene062946.t1	MTR_8g461210	39.560	91	51	3	4	92	14	102	1.14e-14	64.3
MS.gene062946.t1	MTR_1g063950	44.928	69	37	1	15	83	37	104	1.19e-14	64.3
MS.gene062946.t1	MTR_1g059770	42.188	64	36	1	27	90	50	112	2.74e-14	63.5
MS.gene062946.t1	MTR_8g026730	41.176	68	37	2	26	91	27	93	2.97e-14	63.2
MS.gene062946.t1	MTR_4g005320	47.541	61	31	1	26	86	70	129	3.14e-14	64.3
MS.gene062946.t1	MTR_0388s0020	41.096	73	39	2	21	90	70	141	4.41e-14	63.5
MS.gene062946.t1	MTR_4g072160	48.387	62	31	1	25	86	36	96	5.58e-14	63.2
MS.gene062946.t1	MTR_3g109160	47.761	67	34	1	26	92	69	134	1.32e-13	62.8
MS.gene062946.t1	MTR_7g101740	46.875	64	33	1	25	88	39	101	1.34e-13	61.6
MS.gene062946.t1	MTR_3g105900	75.000	36	9	0	25	60	1171	1206	7.11e-13	62.8
MS.gene062946.t1	MTR_8g101520	44.615	65	35	1	27	91	51	114	2.27e-12	59.3
MS.gene062946.t1	MTR_3g098970	33.333	81	52	2	13	93	41	119	4.44e-12	58.5
MS.gene062946.t1	MTR_7g104940	38.710	62	37	1	29	90	53	113	4.86e-12	57.8
MS.gene062946.t1	MTR_2g095430	40.000	75	38	3	10	78	27	100	5.82e-12	57.8
MS.gene062946.t1	MTR_3g097120	39.241	79	39	2	21	91	4	81	1.98e-11	55.8
MS.gene062946.t1	MTR_7g405740	43.333	60	33	1	27	86	68	126	5.18e-11	55.8
MS.gene062946.t1	MTR_2g066830	36.620	71	44	1	21	91	53	122	5.33e-11	55.5
MS.gene062946.t1	MTR_7g104950	35.484	62	39	1	29	90	53	113	6.17e-11	55.1
MS.gene062946.t1	MTR_8g096470	43.333	60	33	1	27	86	47	105	9.26e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062946.t1	AT5G18080	63.953	86	26	2	11	91	5	90	4.56e-35	115
MS.gene062946.t1	AT5G18060	63.953	86	26	2	11	91	5	90	6.00e-35	115
MS.gene062946.t1	AT5G18020	68.421	76	23	1	17	91	15	90	6.11e-35	115
MS.gene062946.t1	AT5G18030	64.286	84	27	2	11	91	5	88	1.52e-34	114
MS.gene062946.t1	AT4G38840	62.353	85	31	1	8	91	15	99	1.62e-34	114
MS.gene062946.t1	AT5G18050	62.791	86	27	2	11	91	5	90	1.96e-34	113
MS.gene062946.t1	AT3G03840	59.341	91	28	2	11	92	5	95	1.22e-33	112
MS.gene062946.t1	AT5G18010	61.628	86	28	2	11	91	5	90	3.24e-33	110
MS.gene062946.t1	AT2G21200	60.714	84	31	2	9	90	3	86	9.04e-33	109
MS.gene062946.t1	AT3G03850	61.798	89	27	2	11	92	5	93	2.90e-32	108
MS.gene062946.t1	AT4G38825	68.056	72	22	1	21	91	18	89	3.40e-32	108
MS.gene062946.t1	AT4G38850	65.753	73	22	1	22	91	17	89	4.98e-31	105
MS.gene062946.t1	AT4G34770	60.241	83	31	1	12	92	21	103	1.43e-30	104
MS.gene062946.t1	AT3G03830	56.818	88	31	2	11	91	5	92	3.53e-30	103
MS.gene062946.t1	AT2G21210	60.274	73	27	1	21	91	23	95	3.55e-30	103
MS.gene062946.t1	AT3G03820	60.811	74	26	1	22	92	23	96	7.71e-30	102
MS.gene062946.t1	AT2G21210	60.274	73	27	1	21	91	90	162	2.29e-29	103
MS.gene062946.t1	AT4G34810	61.250	80	25	3	17	90	38	117	1.37e-27	97.4
MS.gene062946.t1	AT4G13790	51.765	85	33	2	8	90	13	91	1.77e-27	96.3
MS.gene062946.t1	AT4G34800	67.213	61	17	1	26	83	21	81	9.69e-27	94.4
MS.gene062946.t1	AT4G38860	58.824	68	28	0	24	91	38	105	3.10e-25	90.9
MS.gene062946.t1	AT2G21220	59.701	67	26	1	24	90	38	103	7.39e-25	90.1
MS.gene062946.t1	AT4G34760	59.701	67	26	1	24	90	41	106	1.36e-24	89.4
MS.gene062946.t1	AT1G75580	61.194	67	25	1	24	90	42	107	1.54e-24	89.4
MS.gene062946.t1	AT4G34780	47.872	94	43	2	4	91	3	96	2.57e-24	88.6
MS.gene062946.t1	AT4G34790	55.385	65	27	1	26	88	39	103	3.20e-22	83.2
MS.gene062946.t1	AT1G19830	60.294	68	25	2	24	90	46	112	2.28e-21	81.6
MS.gene062946.t1	AT2G16580	55.072	69	30	1	20	88	38	105	2.31e-21	81.3
MS.gene062946.t1	AT4G36110	56.250	64	27	1	25	88	39	101	6.59e-21	79.7
MS.gene062946.t1	AT2G18010	54.688	64	28	1	25	88	47	109	1.15e-19	77.0
MS.gene062946.t1	AT5G66260	54.545	66	29	1	26	91	34	98	8.63e-19	74.3
MS.gene062946.t1	AT3G20220	52.308	65	29	2	26	89	47	110	6.02e-18	72.8
MS.gene062946.t1	AT3G43120	50.000	62	30	1	25	86	78	138	4.17e-17	71.6
MS.gene062946.t1	AT3G51200	53.125	64	28	2	21	83	34	96	1.03e-16	69.3
MS.gene062946.t1	AT5G20810	51.613	62	29	1	25	86	78	138	2.08e-16	70.1
MS.gene062946.t1	AT5G20810	51.613	62	29	1	25	86	78	138	4.57e-16	69.7
MS.gene062946.t1	AT2G46690	39.286	84	46	3	13	92	10	92	7.67e-16	67.4
MS.gene062946.t1	AT1G75590	45.946	74	37	2	11	84	29	99	9.96e-16	68.2
MS.gene062946.t1	AT4G34750	45.312	64	34	1	25	88	36	98	1.15e-15	67.8
MS.gene062946.t1	AT4G34750	45.312	64	34	1	25	88	36	98	1.15e-15	67.8
MS.gene062946.t1	AT5G10990	47.059	68	33	2	19	84	32	98	2.14e-15	67.0
MS.gene062946.t1	AT1G19840	44.048	84	43	3	4	84	16	98	3.28e-15	66.6
MS.gene062946.t1	AT3G61900	42.857	70	36	2	25	91	29	97	4.91e-15	65.9
MS.gene062946.t1	AT2G45210	41.096	73	39	2	21	90	74	145	7.81e-15	65.9
MS.gene062946.t1	AT4G31320	52.459	61	28	1	26	86	80	139	8.78e-15	66.2
MS.gene062946.t1	AT3G60690	43.478	69	35	2	26	91	88	155	3.34e-14	64.3
MS.gene062946.t1	AT2G24400	52.459	61	28	1	26	86	64	123	4.61e-14	64.3
MS.gene062946.t1	AT4G00880	45.588	68	34	2	26	91	28	94	1.04e-13	62.0
MS.gene062946.t1	AT2G37030	49.153	59	29	1	25	83	48	105	1.93e-13	61.2
MS.gene062946.t1	AT5G53590	32.292	96	59	2	1	91	21	115	3.11e-13	61.2
MS.gene062946.t1	AT3G03847	37.931	87	41	2	3	83	48	127	6.59e-13	60.1
MS.gene062946.t1	AT2G36210	39.726	73	44	0	16	88	44	116	2.17e-12	58.9
MS.gene062946.t1	AT4G12410	41.176	68	36	2	26	90	76	142	2.27e-12	59.3
MS.gene062946.t1	AT3G12830	36.842	76	47	1	16	91	40	114	6.57e-12	57.8
MS.gene062946.t1	AT4G09530	44.262	61	31	2	27	84	29	89	6.86e-12	57.0
MS.gene062946.t1	AT4G22620	37.500	72	41	2	22	90	75	145	7.00e-12	58.2
MS.gene062946.t1	AT1G56150	42.424	66	37	1	26	91	38	102	1.10e-11	56.6
MS.gene062946.t1	AT3G09870	45.312	64	32	2	25	86	44	106	1.33e-11	56.2
MS.gene062946.t1	AT1G79130	34.940	83	45	2	8	90	38	111	3.64e-11	55.8
MS.gene062946.t1	AT3G53250	39.437	71	37	2	17	87	45	109	4.20e-11	55.5
MS.gene062946.t1	AT1G16510	42.029	69	37	2	26	92	54	121	6.79e-11	55.5
MS.gene062946.t1	AT3G53250	39.474	76	39	3	17	92	76	144	7.01e-11	55.5

Find 27 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTCAAGTATGATAT+AGG	0.341940	4.2:+35646775	None:intergenic
CATATAACATCTCGCTTGAA+TGG	0.378751	4.2:-35646655	MS.gene062946:CDS
AGTCAATCTGAAGAAGAGTT+TGG	0.395683	4.2:-35646733	MS.gene062946:CDS
GTTGGTTCAAGTATGATATA+GGG	0.441635	4.2:+35646776	None:intergenic
CTCAGTAAGTCTTGAAATGA+TGG	0.470774	4.2:+35646754	None:intergenic
TTCTGATGATACCAGGGAAA+CGG	0.506489	4.2:+35646899	None:intergenic
ACTATGGGTTTCCGTTTCCC+TGG	0.517401	4.2:-35646910	MS.gene062946:CDS
GTAAGTCTTGAAATGATGGT+TGG	0.533415	4.2:+35646758	None:intergenic
CGACAGATTTCGAAACTGCT+CGG	0.536252	4.2:+35646857	None:intergenic
TGGCCTCACCATTCCTTGCA+CGG	0.538434	4.2:-35646692	MS.gene062946:CDS
GACATCTTCCGTGCAAGGAA+TGG	0.540062	4.2:+35646684	None:intergenic
TATACTGCAAGATATCCCTT+TGG	0.541773	4.2:+35646829	None:intergenic
GTTTCCCTGGTATCATCAGA+AGG	0.542495	4.2:-35646897	MS.gene062946:CDS
AGGAATGGTGAGGCCACCCA+TGG	0.554354	4.2:+35646699	None:intergenic
GTTGCCCTTCTGATGATACC+AGG	0.554942	4.2:+35646892	None:intergenic
GTTTGGATATGATCATCCCA+TGG	0.570301	4.2:-35646716	MS.gene062946:CDS
AAATCTGTCGACATGCCAAA+GGG	0.572490	4.2:-35646844	MS.gene062946:CDS
TGAAAGACATCTTCCGTGCA+AGG	0.572644	4.2:+35646679	None:intergenic
GGATATCTTGCAGTATATGT+CGG	0.586772	4.2:-35646823	MS.gene062946:CDS
GAAATCTGTCGACATGCCAA+AGG	0.595847	4.2:-35646845	MS.gene062946:CDS
GGATATGATCATCCCATGGG+TGG	0.600402	4.2:-35646712	MS.gene062946:CDS
GGAATGGTGAGGCCACCCAT+GGG	0.636587	4.2:+35646700	None:intergenic
TTTGGATATGATCATCCCAT+GGG	0.641263	4.2:-35646715	MS.gene062946:CDS
TTTCCCTGGTATCATCAGAA+GGG	0.649660	4.2:-35646896	MS.gene062946:CDS
TTGCCCTTCTGATGATACCA+GGG	0.665474	4.2:+35646893	None:intergenic
CTTCCGTGCAAGGAATGGTG+AGG	0.671810	4.2:+35646689	None:intergenic
ATGTCGGAGAGAAACAAAAG+CGG	0.731882	4.2:-35646807	MS.gene062946:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	GTTGGTTCAAGTATGATATA+GGG	+	chr4.2:35646782-35646801	None:intergenic	30.0%
	AGTCAATCTGAAGAAGAGTT+TGG	-	chr4.2:35646822-35646841	MS.gene062946:CDS	35.0%
	CATATAACATCTCGCTTGAA+TGG	-	chr4.2:35646900-35646919	MS.gene062946:CDS	35.0%
	CTCAGTAAGTCTTGAAATGA+TGG	+	chr4.2:35646804-35646823	None:intergenic	35.0%
	GGATATCTTGCAGTATATGT+CGG	-	chr4.2:35646732-35646751	MS.gene062946:CDS	35.0%
	GTAAGTCTTGAAATGATGGT+TGG	+	chr4.2:35646800-35646819	None:intergenic	35.0%
	TATACTGCAAGATATCCCTT+TGG	+	chr4.2:35646729-35646748	None:intergenic	35.0%
	TTTGGATATGATCATCCCAT+GGG	-	chr4.2:35646840-35646859	MS.gene062946:CDS	35.0%
!	GGTTGGTTCAAGTATGATAT+AGG	+	chr4.2:35646783-35646802	None:intergenic	35.0%
	AAATCTGTCGACATGCCAAA+GGG	-	chr4.2:35646711-35646730	MS.gene062946:CDS	40.0%
	ATGTCGGAGAGAAACAAAAG+CGG	-	chr4.2:35646748-35646767	MS.gene062946:CDS	40.0%
	GTTTGGATATGATCATCCCA+TGG	-	chr4.2:35646839-35646858	MS.gene062946:CDS	40.0%
	TTCTGATGATACCAGGGAAA+CGG	+	chr4.2:35646659-35646678	None:intergenic	40.0%
	TTTCCCTGGTATCATCAGAA+GGG	-	chr4.2:35646659-35646678	MS.gene062946:CDS	40.0%
	CGACAGATTTCGAAACTGCT+CGG	+	chr4.2:35646701-35646720	None:intergenic	45.0%
	GAAATCTGTCGACATGCCAA+AGG	-	chr4.2:35646710-35646729	MS.gene062946:CDS	45.0%
	GTTTCCCTGGTATCATCAGA+AGG	-	chr4.2:35646658-35646677	MS.gene062946:CDS	45.0%
	TGAAAGACATCTTCCGTGCA+AGG	+	chr4.2:35646879-35646898	None:intergenic	45.0%
	TTGCCCTTCTGATGATACCA+GGG	+	chr4.2:35646665-35646684	None:intergenic	45.0%
	GACATCTTCCGTGCAAGGAA+TGG	+	chr4.2:35646874-35646893	None:intergenic	50.0%
	GGATATGATCATCCCATGGG+TGG	-	chr4.2:35646843-35646862	MS.gene062946:CDS	50.0%
	GTTGCCCTTCTGATGATACC+AGG	+	chr4.2:35646666-35646685	None:intergenic	50.0%
	CTTCCGTGCAAGGAATGGTG+AGG	+	chr4.2:35646869-35646888	None:intergenic	55.0%
	TGGCCTCACCATTCCTTGCA+CGG	-	chr4.2:35646863-35646882	MS.gene062946:CDS	55.0%
	AGGAATGGTGAGGCCACCCA+TGG	+	chr4.2:35646859-35646878	None:intergenic	60.0%
	GGAATGGTGAGGCCACCCAT+GGG	+	chr4.2:35646858-35646877	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35646648	35646929	35646648	ID=MS.gene062946
chr4.2	mRNA	35646648	35646929	35646648	ID=MS.gene062946.t1;Parent=MS.gene062946
chr4.2	exon	35646648	35646929	35646648	ID=MS.gene062946.t1.exon1;Parent=MS.gene062946.t1
chr4.2	CDS	35646648	35646929	35646648	ID=cds.MS.gene062946.t1;Parent=MS.gene062946.t1

Gene Sequence	>MS.gene062946 ATGGGTTTCCGTTTCCCTGGTATCATCAGAAGGGCAACATTTTCTGCAAACCGAGCAGTTTCGAAATCTGTCGACATGCCAAAGGGATATCTTGCAGTATATGTCGGAGAGAAACAAAAGCGGTATGTGATCCCTATATCATACTTGAACCAACCATCATTTCAAGACTTACTGAGTCAATCTGAAGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACGGAAGATGTCTTTCAACATATAACATCTCGCTTGAATGGACTATGA
Protein sequence	>MS.gene062946.t1 MGFRFPGIIRRATFSANRAVSKSVDMPKGYLAVYVGEKQKRYVIPISYLNQPSFQDLLSQSEEEFGYDHPMGGLTIPCTEDVFQHITSRLNGL