AlfalfaGEDB | MS.gene062958

M. sativa cultivar XinJiangDaYe / MS.gene062958

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062958.t1	AES89317.2	94.1	85	5	0	1	85	1	85	1.90E-36	161.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062958.t1	P33081	71.8	85	21	1	1	85	1	82	6.1e-28	124.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062958.t1	G7JL42	94.1	85	5	0	1	85	1	85	1.3e-36	161.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062958	MS.gene75315	PPI
MS.gene045362	MS.gene062958	PPI
MS.gene77523	MS.gene062958	PPI
MS.gene003587	MS.gene062958	PPI
MS.gene003590	MS.gene062958	PPI
MS.gene045368	MS.gene062958	PPI
MS.gene063112	MS.gene062958	PPI
MS.gene79891	MS.gene062958	PPI
MS.gene79887	MS.gene062958	PPI
MS.gene062973	MS.gene062958	PPI
MS.gene77526	MS.gene062958	PPI
MS.gene047517	MS.gene062958	PPI
MS.gene045360	MS.gene062958	PPI
MS.gene014669	MS.gene062958	PPI
MS.gene062958	MS.gene057808	PPI
MS.gene057818	MS.gene062958	PPI
MS.gene68162	MS.gene062958	PPI
MS.gene50687	MS.gene062958	PPI
MS.gene75677	MS.gene062958	PPI
MS.gene057795	MS.gene062958	PPI
MS.gene062958	MS.gene68163	PPI
MS.gene68165	MS.gene062958	PPI
MS.gene01764	MS.gene062958	PPI
MS.gene045361	MS.gene062958	PPI
MS.gene50675	MS.gene062958	PPI
MS.gene003591	MS.gene062958	PPI
MS.gene062979	MS.gene062958	PPI
MS.gene40325	MS.gene062958	PPI
MS.gene062943	MS.gene062958	PPI
MS.gene01358	MS.gene062958	PPI
MS.gene014668	MS.gene062958	PPI
MS.gene062958	MS.gene75678	PPI
MS.gene003608	MS.gene062958	PPI
MS.gene75675	MS.gene062958	PPI
MS.gene003583	MS.gene062958	PPI
MS.gene79888	MS.gene062958	PPI
MS.gene40326	MS.gene062958	PPI
MS.gene062952	MS.gene062958	PPI
MS.gene77527	MS.gene062958	PPI
MS.gene50654	MS.gene062958	PPI
MS.gene50676	MS.gene062958	PPI
MS.gene003614	MS.gene062958	PPI
MS.gene057797	MS.gene062958	PPI
MS.gene50652	MS.gene062958	PPI
MS.gene23370	MS.gene062958	PPI
MS.gene50766	MS.gene062958	PPI
MS.gene003594	MS.gene062958	PPI
MS.gene003596	MS.gene062958	PPI
MS.gene50665	MS.gene062958	PPI
MS.gene062958	MS.gene50764	PPI
MS.gene79889	MS.gene062958	PPI
MS.gene50677	MS.gene062958	PPI
MS.gene003625	MS.gene062958	PPI
MS.gene68759	MS.gene062958	PPI
MS.gene003586	MS.gene062958	PPI
MS.gene062988	MS.gene062958	PPI
MS.gene77528	MS.gene062958	PPI
MS.gene50763	MS.gene062958	PPI
MS.gene062958	MS.gene014670	PPI
MS.gene031200	MS.gene062958	PPI
MS.gene045365	MS.gene062958	PPI
MS.gene79885	MS.gene062958	PPI
MS.gene50659	MS.gene062958	PPI
MS.gene75316	MS.gene062958	PPI
MS.gene062958	MS.gene75679	PPI
MS.gene057790	MS.gene062958	PPI
MS.gene045363	MS.gene062958	PPI
MS.gene003624	MS.gene062958	PPI
MS.gene23371	MS.gene062958	PPI
MS.gene031201	MS.gene062958	PPI
MS.gene031199	MS.gene062958	PPI
MS.gene75314	MS.gene062958	PPI
MS.gene77529	MS.gene062958	PPI
MS.gene68761	MS.gene062958	PPI
MS.gene014667	MS.gene062958	PPI
MS.gene68760	MS.gene062958	PPI
MS.gene75676	MS.gene062958	PPI
MS.gene062958	MS.gene79886	PPI
MS.gene062958	MS.gene014671	PPI
MS.gene062951	MS.gene062958	PPI
MS.gene062958	MS.gene50765	PPI
MS.gene057778	MS.gene062958	PPI
MS.gene75673	MS.gene062958	PPI
MS.gene062958	MS.gene75672	PPI
MS.gene045366	MS.gene062958	PPI
MS.gene062963	MS.gene062958	PPI
MS.gene062958	MS.gene062974	PPI
MS.gene68164	MS.gene062958	PPI
MS.gene031198	MS.gene062958	PPI
MS.gene75674	MS.gene062958	PPI
MS.gene79890	MS.gene062958	PPI
MS.gene062958	MS.gene045367	PPI
MS.gene003615	MS.gene062958	PPI
MS.gene045364	MS.gene062958	PPI
MS.gene003602	MS.gene062958	PPI
MS.gene23372	MS.gene062958	PPI
MS.gene003627	MS.gene062958	PPI
MS.gene003577	MS.gene062958	PPI
MS.gene062958	MS.gene002380	PPI
MS.gene77524	MS.gene062958	PPI
MS.gene062984	MS.gene062958	PPI
MS.gene057801	MS.gene062958	PPI
MS.gene014223	MS.gene062958	PPI
MS.gene014222	MS.gene062958	PPI
MS.gene40327	MS.gene062958	PPI
MS.gene062958	MS.gene50684	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062958.t1	MTR_4g072470	94.118	85	5	0	1	85	1	85	1.80e-54	163
MS.gene062958.t1	MTR_4g072490	84.706	85	13	0	1	85	1	85	1.43e-50	154
MS.gene062958.t1	MTR_4g072740	84.706	85	13	0	1	85	1	85	8.86e-50	151
MS.gene062958.t1	MTR_4g072465	81.395	86	15	1	1	85	1	86	4.98e-47	145
MS.gene062958.t1	MTR_4g072630	80.233	86	16	1	1	85	1	86	9.72e-47	144
MS.gene062958.t1	MTR_4g072370	79.545	88	15	1	1	85	1	88	3.36e-46	142
MS.gene062958.t1	MTR_4g072580	78.824	85	18	0	1	85	1	85	4.36e-46	142
MS.gene062958.t1	MTR_4g072450	91.765	85	7	0	1	85	1	85	4.95e-46	142
MS.gene062958.t1	MTR_4g072330	77.273	88	17	1	1	85	1	88	1.05e-45	141
MS.gene062958.t1	MTR_4g072690	88.235	85	10	0	1	85	1	85	1.60e-45	141
MS.gene062958.t1	MTR_4g072830	79.310	87	15	1	1	84	1	87	5.70e-45	139
MS.gene062958.t1	MTR_4g072670	81.395	86	15	1	1	85	1	86	8.31e-44	136
MS.gene062958.t1	MTR_4g072600	76.471	85	20	0	1	85	1	85	1.93e-43	135
MS.gene062958.t1	MTR_3g084150	68.889	90	23	1	1	85	1	90	1.92e-42	133
MS.gene062958.t1	MTR_4g072610	75.294	85	20	1	1	85	1	84	3.36e-42	132
MS.gene062958.t1	MTR_4g072540	76.744	86	19	1	1	85	1	86	9.31e-42	131
MS.gene062958.t1	MTR_3g084180	67.778	90	24	1	1	85	1	90	1.25e-41	131
MS.gene062958.t1	MTR_3g084170	70.000	90	22	1	1	85	1	90	1.90e-41	130
MS.gene062958.t1	MTR_4g072510	75.581	86	20	1	1	85	1	86	4.47e-41	130
MS.gene062958.t1	MTR_8g461410	66.667	90	25	1	1	85	1	90	4.84e-41	130
MS.gene062958.t1	MTR_5g008350	82.432	74	13	0	1	74	1	74	6.88e-41	129
MS.gene062958.t1	MTR_4g072720	75.581	86	20	1	1	85	1	86	8.64e-41	129
MS.gene062958.t1	MTR_3g110032	69.231	91	22	1	1	85	1	91	9.31e-41	129
MS.gene062958.t1	MTR_4g072650	72.941	85	22	1	1	85	1	84	1.12e-40	129
MS.gene062958.t1	MTR_3g110038	68.889	90	23	1	1	85	1	90	1.69e-40	128
MS.gene062958.t1	MTR_4g072870	68.132	91	23	1	1	85	1	91	1.77e-40	128
MS.gene062958.t1	MTR_3g084240	68.889	90	23	1	1	85	1	90	2.65e-40	128
MS.gene062958.t1	MTR_4g072590	82.353	85	15	0	1	85	1	85	2.84e-40	127
MS.gene062958.t1	MTR_3g084220	67.778	90	24	1	1	85	1	90	6.03e-40	127
MS.gene062958.t1	MTR_4g072880	65.934	91	25	1	1	85	1	91	1.07e-39	126
MS.gene062958.t1	MTR_4g072310	67.033	91	24	1	1	85	1	91	4.62e-39	125
MS.gene062958.t1	MTR_4g072240	64.835	91	26	1	1	85	1	91	8.15e-39	124
MS.gene062958.t1	MTR_4g072890	64.835	91	26	1	1	85	1	91	1.61e-38	123
MS.gene062958.t1	MTR_4g072300	63.736	91	27	1	1	85	1	91	2.31e-38	123
MS.gene062958.t1	MTR_4g072220	63.736	91	27	1	1	85	1	91	3.29e-38	122
MS.gene062958.t1	MTR_4g050700	65.934	91	25	1	1	85	1	91	3.37e-38	122
MS.gene062958.t1	MTR_2g012410	65.934	91	25	1	1	85	1	91	3.37e-38	122
MS.gene062958.t1	MTR_4g072570	67.778	90	24	1	1	85	1	90	3.42e-38	122
MS.gene062958.t1	MTR_4g072480	65.556	90	26	1	1	85	1	90	6.04e-38	122
MS.gene062958.t1	MTR_4g072260	63.736	91	27	1	1	85	1	91	8.65e-38	122
MS.gene062958.t1	MTR_3g084250	66.667	90	25	1	1	85	1	90	1.05e-37	121
MS.gene062958.t1	MTR_4g072250	68.132	91	22	2	1	85	1	90	1.07e-37	121
MS.gene062958.t1	MTR_4g072860	69.231	91	22	1	1	85	1	91	1.21e-37	121
MS.gene062958.t1	MTR_4g072640	66.667	90	25	1	1	85	1	90	1.30e-37	121
MS.gene062958.t1	MTR_3g084260	67.033	91	24	1	1	85	1	91	1.40e-37	121
MS.gene062958.t1	MTR_4g072620	64.444	90	27	1	1	85	1	90	1.98e-37	120
MS.gene062958.t1	MTR_4g072680	65.556	90	26	1	1	85	1	90	2.90e-37	120
MS.gene062958.t1	MTR_4g072270	64.835	91	26	1	1	85	1	91	3.76e-37	120
MS.gene062958.t1	MTR_4g072380	70.930	86	24	1	1	85	1	86	3.76e-37	120
MS.gene062958.t1	MTR_3g110042	66.292	89	25	1	1	84	1	89	4.50e-37	120
MS.gene062958.t1	MTR_3g117630	69.512	82	25	0	4	85	9	90	8.40e-37	119
MS.gene062958.t1	MTR_4g072820	69.767	86	24	2	1	85	1	85	1.18e-36	119
MS.gene062958.t1	MTR_4g072660	64.706	85	30	0	1	85	1	85	2.20e-36	118
MS.gene062958.t1	MTR_4g072850	63.043	92	27	1	1	85	1	92	2.44e-36	118
MS.gene062958.t1	MTR_4g072500	67.033	91	23	2	1	85	1	90	5.42e-36	117
MS.gene062958.t1	MTR_4g072460	63.333	90	28	1	1	85	1	90	6.98e-36	117
MS.gene062958.t1	MTR_4g072230	65.934	91	23	2	1	85	1	89	8.62e-36	116
MS.gene062958.t1	MTR_4g072730	62.222	90	29	1	1	85	1	90	1.23e-35	116
MS.gene062958.t1	MTR_4g072530	65.934	91	24	2	1	85	1	90	2.51e-35	115
MS.gene062958.t1	MTR_3g084190	62.222	90	29	1	1	85	1	90	6.39e-34	112
MS.gene062958.t1	MTR_3g084210	61.111	90	30	1	1	85	1	90	1.00e-33	111
MS.gene062958.t1	MTR_5g008360	65.385	78	27	0	8	85	4	81	2.22e-33	110
MS.gene062958.t1	MTR_8g461420	61.111	90	30	1	1	85	1	90	3.46e-33	110
MS.gene062958.t1	MTR_3g084160	61.111	90	30	1	1	85	1	90	9.07e-33	109
MS.gene062958.t1	MTR_3g084230	60.000	90	31	1	1	85	1	90	1.45e-32	108
MS.gene062958.t1	MTR_5g008370	64.444	90	27	2	1	85	1	90	2.99e-32	109
MS.gene062958.t1	MTR_4g072940	61.111	90	28	1	3	85	33	122	5.54e-32	108
MS.gene062958.t1	MTR_3g110045	61.364	88	29	1	3	85	62	149	1.88e-31	107
MS.gene062958.t1	MTR_3g084200	66.667	72	19	1	1	67	1	72	2.97e-30	103
MS.gene062958.t1	MTR_4g072980	54.348	92	34	2	1	84	1	92	1.14e-29	101
MS.gene062958.t1	MTR_4g072560	57.317	82	32	2	4	84	18	97	2.32e-29	100
MS.gene062958.t1	MTR_4g072550	58.824	85	34	1	1	85	18	101	1.29e-28	99.0
MS.gene062958.t1	MTR_4g072910	56.250	80	34	1	7	85	21	100	3.05e-28	98.2
MS.gene062958.t1	MTR_4g072770	58.824	85	30	2	1	85	1	80	8.07e-28	96.3
MS.gene062958.t1	MTR_3g117640	62.687	67	24	1	20	85	34	100	3.81e-27	95.5
MS.gene062958.t1	MTR_4g072290	54.118	85	31	1	1	85	1	77	2.09e-25	90.1
MS.gene062958.t1	MTR_3g110035	54.321	81	34	1	5	85	59	136	6.52e-25	90.5
MS.gene062958.t1	MTR_4g072750	63.514	74	18	2	1	66	1	73	5.52e-24	86.7
MS.gene062958.t1	MTR_4g072190	51.190	84	36	2	5	84	17	99	2.55e-22	82.8
MS.gene062958.t1	MTR_3g117610	56.923	65	27	1	18	82	43	106	8.37e-22	82.0
MS.gene062958.t1	MTR_6g077850	53.030	66	31	0	20	85	34	99	1.61e-21	80.9
MS.gene062958.t1	MTR_4g072930	51.282	78	32	2	14	85	33	110	1.64e-21	81.3
MS.gene062958.t1	MTR_3g113310	52.239	67	31	1	18	84	40	105	2.72e-21	80.5
MS.gene062958.t1	MTR_4g072280	53.333	75	29	1	1	69	1	75	3.05e-21	79.7
MS.gene062958.t1	MTR_4g072840	49.412	85	18	2	1	85	1	60	3.50e-19	73.9
MS.gene062958.t1	MTR_5g021820	45.238	84	42	2	4	84	21	103	1.44e-18	73.6
MS.gene062958.t1	MTR_8g461400	45.556	90	18	2	1	85	1	64	3.50e-18	71.6
MS.gene062958.t1	MTR_8g076040	52.381	63	29	1	20	82	41	102	6.38e-18	72.0
MS.gene062958.t1	MTR_2g043960	45.556	90	34	2	2	77	44	132	7.95e-18	73.2
MS.gene062958.t1	MTR_4g124750	45.349	86	32	2	6	77	41	125	4.70e-17	71.2
MS.gene062958.t1	MTR_1g009150	50.725	69	33	1	12	80	63	130	1.51e-16	70.5
MS.gene062958.t1	MTR_4g005320	50.820	61	29	1	20	80	70	129	1.57e-15	67.4
MS.gene062958.t1	MTR_4g005310	50.000	62	30	1	20	80	62	123	1.95e-15	67.0
MS.gene062958.t1	MTR_3g109160	44.156	77	42	1	4	80	53	128	3.16e-15	66.6
MS.gene062958.t1	MTR_3g092220	36.471	85	51	2	3	85	16	99	3.88e-15	65.1
MS.gene062958.t1	MTR_7g118010	44.928	69	35	2	19	85	22	89	5.81e-15	64.3
MS.gene062958.t1	MTR_4g025830	42.647	68	35	2	20	84	79	145	9.48e-14	62.8
MS.gene062958.t1	MTR_3g105900	80.000	35	7	0	20	54	1172	1206	1.67e-13	64.3
MS.gene062958.t1	MTR_0388s0020	41.558	77	41	2	11	84	66	141	1.74e-13	61.6
MS.gene062958.t1	MTR_1g061570	46.575	73	36	2	10	80	7	78	2.20e-13	60.8
MS.gene062958.t1	MTR_1g094750	47.541	61	31	1	20	80	50	109	3.85e-13	60.1
MS.gene062958.t1	MTR_8g026730	40.580	69	38	2	19	85	26	93	5.58e-13	59.3
MS.gene062958.t1	MTR_5g008380	84.375	32	5	0	54	85	246	277	8.36e-13	61.6
MS.gene062958.t1	MTR_7g101740	46.032	63	33	1	20	82	40	101	2.24e-12	58.2
MS.gene062958.t1	MTR_1g024085	42.105	76	38	2	4	79	26	95	2.61e-12	58.5
MS.gene062958.t1	MTR_1g063950	43.077	65	36	1	13	77	41	104	4.82e-12	57.4
MS.gene062958.t1	MTR_4g021810	48.571	70	33	3	13	80	18	86	4.85e-12	57.0
MS.gene062958.t1	MTR_8g461210	44.262	61	33	1	20	80	35	94	4.04e-11	55.1
MS.gene062958.t1	MTR_4g072160	45.902	61	32	1	20	80	37	96	5.55e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062958.t1	AT4G38840	71.642	67	18	1	20	85	33	99	6.15e-32	107
MS.gene062958.t1	AT2G21210	56.579	76	31	1	12	85	20	95	2.05e-29	100
MS.gene062958.t1	AT5G18030	60.256	78	30	1	9	85	11	88	2.08e-29	100
MS.gene062958.t1	AT5G18020	60.811	74	28	1	13	85	17	90	2.55e-29	100
MS.gene062958.t1	AT5G18050	60.274	73	28	1	13	84	17	89	4.06e-29	100
MS.gene062958.t1	AT5G18080	60.811	74	28	1	13	85	17	90	4.15e-29	99.8
MS.gene062958.t1	AT5G18060	60.811	74	28	1	13	85	17	90	7.50e-29	99.4
MS.gene062958.t1	AT2G21210	56.579	76	31	1	12	85	87	162	1.08e-28	101
MS.gene062958.t1	AT4G34800	60.494	81	28	2	1	77	1	81	2.46e-28	98.2
MS.gene062958.t1	AT5G18010	59.459	74	29	1	13	85	17	90	4.78e-28	97.1
MS.gene062958.t1	AT4G38825	59.722	72	28	1	15	85	18	89	7.20e-28	96.7
MS.gene062958.t1	AT4G34810	67.143	70	18	2	20	84	48	117	1.14e-27	97.1
MS.gene062958.t1	AT2G21200	58.333	72	29	1	14	84	15	86	7.22e-27	94.0
MS.gene062958.t1	AT4G38850	56.790	81	28	2	8	85	13	89	7.93e-27	94.0
MS.gene062958.t1	AT3G03840	57.895	76	30	1	12	85	19	94	2.13e-26	93.2
MS.gene062958.t1	AT4G34770	57.333	75	30	1	13	85	28	102	2.00e-25	90.9
MS.gene062958.t1	AT3G03830	55.844	77	31	1	12	85	16	92	4.59e-25	89.7
MS.gene062958.t1	AT3G03850	61.194	67	24	1	21	85	26	92	4.16e-24	87.4
MS.gene062958.t1	AT4G13790	44.048	84	45	1	3	84	8	91	4.23e-24	87.4
MS.gene062958.t1	AT3G03820	50.649	77	35	1	12	85	19	95	9.00e-24	86.7
MS.gene062958.t1	AT4G34790	63.333	60	20	1	20	77	39	98	7.18e-22	82.0
MS.gene062958.t1	AT4G34780	57.143	70	27	1	18	84	26	95	2.19e-21	80.9
MS.gene062958.t1	AT1G75580	56.716	67	28	1	18	84	42	107	4.64e-21	80.1
MS.gene062958.t1	AT4G38860	51.471	68	33	0	18	85	38	105	2.23e-20	78.2
MS.gene062958.t1	AT4G34760	52.239	67	31	1	18	84	41	106	8.69e-20	76.6
MS.gene062958.t1	AT2G21220	50.746	67	32	1	18	84	38	103	3.18e-19	75.5
MS.gene062958.t1	AT2G16580	52.308	65	30	1	18	82	42	105	5.45e-19	74.7
MS.gene062958.t1	AT4G36110	47.674	86	36	3	5	82	17	101	3.28e-18	72.8
MS.gene062958.t1	AT1G19830	50.649	77	36	2	9	84	37	112	9.13e-18	72.0
MS.gene062958.t1	AT5G66260	46.988	83	42	2	4	85	17	98	1.53e-17	70.9
MS.gene062958.t1	AT3G20220	53.030	66	29	2	19	83	46	110	1.82e-17	71.2
MS.gene062958.t1	AT3G43120	55.172	58	25	1	20	77	79	135	2.50e-17	72.0
MS.gene062958.t1	AT5G20810	45.349	86	32	2	6	77	51	135	6.42e-17	70.9
MS.gene062958.t1	AT2G18010	50.794	63	30	1	20	82	48	109	9.12e-17	69.3
MS.gene062958.t1	AT5G20810	45.349	86	32	2	6	77	51	135	1.06e-16	70.9
MS.gene062958.t1	AT2G37030	50.000	62	30	1	20	81	49	109	8.36e-14	62.0
MS.gene062958.t1	AT4G31320	45.588	68	36	1	13	80	73	139	1.49e-13	62.8
MS.gene062958.t1	AT2G24400	50.000	62	30	1	19	80	63	123	8.42e-13	60.5
MS.gene062958.t1	AT1G75590	45.000	60	32	1	20	79	42	100	1.05e-11	57.4
MS.gene062958.t1	AT3G61900	38.554	83	47	2	6	85	16	97	1.19e-11	56.6
MS.gene062958.t1	AT2G46690	37.179	78	45	2	11	85	15	91	1.21e-11	56.2
MS.gene062958.t1	AT4G34750	39.683	63	37	1	20	82	37	98	1.34e-11	57.0
MS.gene062958.t1	AT4G34750	39.683	63	37	1	20	82	37	98	1.34e-11	57.0
MS.gene062958.t1	AT4G00880	37.647	85	48	3	3	85	13	94	1.35e-11	56.2
MS.gene062958.t1	AT3G51200	46.575	73	33	3	10	77	25	96	1.44e-11	55.8
MS.gene062958.t1	AT4G12410	41.176	68	36	2	20	84	76	142	1.63e-11	57.0
MS.gene062958.t1	AT3G53250	37.500	72	41	1	10	81	42	109	2.98e-11	55.5
MS.gene062958.t1	AT5G10990	43.333	60	33	1	20	79	41	99	3.92e-11	55.8
MS.gene062958.t1	AT4G22620	34.146	82	50	2	6	84	65	145	4.65e-11	55.8
MS.gene062958.t1	AT1G19840	40.789	76	40	2	4	79	29	99	6.48e-11	55.1

Find 18 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGCATCATCTTCAAAATCTA+TGG	0.196842	4.2:-35555276	MS.gene062958:CDS
CACTTTGGCTCAGCAATTCT+TGG	0.198061	4.2:+35555165	None:intergenic
TTTGCTTCAAATACGATATA+GGG	0.268810	4.2:+35555195	None:intergenic
GTTTACCTAGTATCAACAAA+AGG	0.443253	4.2:-35555298	MS.gene062958:CDS
ATTCAAATTGTTCCTCACTT+TGG	0.448469	4.2:+35555150	None:intergenic
AAAATCTATGGGTGTTCCAA+AGG	0.503784	4.2:-35555264	MS.gene062958:CDS
TTTGAATATGATCATCCAAT+GGG	0.507762	4.2:-35555134	MS.gene062958:CDS
TTTACCTAGTATCAACAAAA+GGG	0.513723	4.2:-35555297	MS.gene062958:CDS
AAATCTATGGGTGTTCCAAA+GGG	0.531901	4.2:-35555263	MS.gene062958:CDS
TATACAGCTAGATATCCCTT+TGG	0.546226	4.2:+35555248	None:intergenic
ATTTGAATATGATCATCCAA+TGG	0.547817	4.2:-35555135	MS.gene062958:CDS
GCATCATCTTCAAAATCTAT+GGG	0.555641	4.2:-35555275	MS.gene062958:CDS
GAGAAAACTTCTTCTCTGCA+AGG	0.572757	4.2:+35555098	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.2:+35555119	None:intergenic
AGAATTGCTGAGCCAAAGTG+AGG	0.630409	4.2:-35555162	MS.gene062958:CDS
GAATATGATCATCCAATGGG+TGG	0.646056	4.2:-35555131	MS.gene062958:CDS
TCTAGCTGTATACGTAGGAG+AGG	0.648096	4.2:-35555237	MS.gene062958:CDS
GGATATCTAGCTGTATACGT+AGG	0.688332	4.2:-35555242	MS.gene062958:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTTGAATATGATCATCCAA+TGG	-	chr4.2:35555246-35555265	MS.gene062958:CDS	25.0%
!	TTTACCTAGTATCAACAAAA+GGG	-	chr4.2:35555084-35555103	MS.gene062958:CDS	25.0%
!	TTTGAATATGATCATCCAAT+GGG	-	chr4.2:35555247-35555266	MS.gene062958:CDS	25.0%
!	TTTGCTTCAAATACGATATA+GGG	+	chr4.2:35555189-35555208	None:intergenic	25.0%
!!	TTTTGCTTCAAATACGATAT+AGG	+	chr4.2:35555190-35555209	None:intergenic	25.0%
	ATTCAAATTGTTCCTCACTT+TGG	+	chr4.2:35555234-35555253	None:intergenic	30.0%
	GCATCATCTTCAAAATCTAT+GGG	-	chr4.2:35555106-35555125	MS.gene062958:CDS	30.0%
	GTTTACCTAGTATCAACAAA+AGG	-	chr4.2:35555083-35555102	MS.gene062958:CDS	30.0%
	AAAATCTATGGGTGTTCCAA+AGG	-	chr4.2:35555117-35555136	MS.gene062958:CDS	35.0%
	AAATCTATGGGTGTTCCAAA+GGG	-	chr4.2:35555118-35555137	MS.gene062958:CDS	35.0%
	GGCATCATCTTCAAAATCTA+TGG	-	chr4.2:35555105-35555124	MS.gene062958:CDS	35.0%
	TATACAGCTAGATATCCCTT+TGG	+	chr4.2:35555136-35555155	None:intergenic	35.0%
	GAATATGATCATCCAATGGG+TGG	-	chr4.2:35555250-35555269	MS.gene062958:CDS	40.0%
	GAGAAAACTTCTTCTCTGCA+AGG	+	chr4.2:35555286-35555305	None:intergenic	40.0%
	GGATATCTAGCTGTATACGT+AGG	-	chr4.2:35555139-35555158	MS.gene062958:CDS	40.0%
!	GATGCCCTTTTGTTGATACT+AGG	+	chr4.2:35555091-35555110	None:intergenic	40.0%
	AGAATTGCTGAGCCAAAGTG+AGG	-	chr4.2:35555219-35555238	MS.gene062958:CDS	45.0%
	TCTAGCTGTATACGTAGGAG+AGG	-	chr4.2:35555144-35555163	MS.gene062958:CDS	45.0%
!	CACTTTGGCTCAGCAATTCT+TGG	+	chr4.2:35555219-35555238	None:intergenic	45.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.2:35555265-35555284	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35555073	35555330	35555073	ID=MS.gene062958
chr4.2	mRNA	35555073	35555330	35555073	ID=MS.gene062958.t1;Parent=MS.gene062958
chr4.2	exon	35555073	35555330	35555073	ID=MS.gene062958.t1.exon1;Parent=MS.gene062958.t1
chr4.2	CDS	35555073	35555330	35555073	ID=cds.MS.gene062958.t1;Parent=MS.gene062958.t1

Gene Sequence	>MS.gene062958 ATGGGTTTTCGTTTACCTAGTATCAACAAAAGGGCATCATCTTCAAAATCTATGGGTGTTCCAAAGGGATATCTAGCTGTATACGTAGGAGAGGAGATGAAGAGATTTGTGATCCCTATATCGTATTTGAAGCAAAAATCATTCCAAGAATTGCTGAGCCAAAGTGAGGAACAATTTGAATATGATCATCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGAAGTTTTCTCAGACATCACTTCTAGATTAAATTGA
Protein sequence	>MS.gene062958.t1 MGFRLPSINKRASSSKSMGVPKGYLAVYVGEEMKRFVIPISYLKQKSFQELLSQSEEQFEYDHPMGGLTIPCREEVFSDITSRLN