AlfalfaGEDB | MS.gene062959

M. sativa cultivar XinJiangDaYe / MS.gene062959

KEGG: -
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062959.t1	AES89319.1	92.9	85	6	0	1	85	1	85	5.80E-38	166.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062959.t1	P33079	69.2	91	22	1	1	85	1	91	1.3e-30	133.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062959.t1	G7JL44	92.9	85	6	0	1	85	1	85	4.2e-38	166.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057811	MS.gene062959	0.950477	1.52E-108	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene057801	MS.gene062959	PPI
MS.gene23371	MS.gene062959	PPI
MS.gene031201	MS.gene062959	PPI
MS.gene062959	MS.gene79885	PPI
MS.gene045362	MS.gene062959	PPI
MS.gene062959	MS.gene50764	PPI
MS.gene77523	MS.gene062959	PPI
MS.gene003587	MS.gene062959	PPI
MS.gene045368	MS.gene062959	PPI
MS.gene063112	MS.gene062959	PPI
MS.gene79890	MS.gene062959	PPI
MS.gene003615	MS.gene062959	PPI
MS.gene062959	MS.gene014670	PPI
MS.gene062973	MS.gene062959	PPI
MS.gene77526	MS.gene062959	PPI
MS.gene047517	MS.gene062959	PPI
MS.gene045360	MS.gene062959	PPI
MS.gene062959	MS.gene01764	PPI
MS.gene057818	MS.gene062959	PPI
MS.gene062959	MS.gene75679	PPI
MS.gene014223	MS.gene062959	PPI
MS.gene50687	MS.gene062959	PPI
MS.gene40327	MS.gene062959	PPI
MS.gene75677	MS.gene062959	PPI
MS.gene057795	MS.gene062959	PPI
MS.gene68165	MS.gene062959	PPI
MS.gene045361	MS.gene062959	PPI
MS.gene50675	MS.gene062959	PPI
MS.gene003591	MS.gene062959	PPI
MS.gene062959	MS.gene79886	PPI
MS.gene062959	MS.gene014671	PPI
MS.gene062959	MS.gene50765	PPI
MS.gene062979	MS.gene062959	PPI
MS.gene003590	MS.gene062959	PPI
MS.gene062943	MS.gene062959	PPI
MS.gene062959	MS.gene75672	PPI
MS.gene062959	MS.gene50654	PPI
MS.gene062959	MS.gene062974	PPI
MS.gene003608	MS.gene062959	PPI
MS.gene062959	MS.gene062951	PPI
MS.gene40326	MS.gene062959	PPI
MS.gene062959	MS.gene79891	PPI
MS.gene062959	MS.gene68162	PPI
MS.gene062959	MS.gene045367	PPI
MS.gene77527	MS.gene062959	PPI
MS.gene062959	MS.gene045363	PPI
MS.gene062959	MS.gene79887	PPI
MS.gene50676	MS.gene062959	PPI
MS.gene003614	MS.gene062959	PPI
MS.gene23370	MS.gene062959	PPI
MS.gene50766	MS.gene062959	PPI
MS.gene003594	MS.gene062959	PPI
MS.gene062959	MS.gene50652	PPI
MS.gene062959	MS.gene002380	PPI
MS.gene79889	MS.gene062959	PPI
MS.gene50677	MS.gene062959	PPI
MS.gene003625	MS.gene062959	PPI
MS.gene68759	MS.gene062959	PPI
MS.gene062959	MS.gene50684	PPI
MS.gene062959	MS.gene014668	PPI
MS.gene062959	MS.gene75315	PPI
MS.gene50763	MS.gene062959	PPI
MS.gene062959	MS.gene68164	PPI
MS.gene40325	MS.gene062959	PPI
MS.gene01358	MS.gene062959	PPI
MS.gene50659	MS.gene062959	PPI
MS.gene75675	MS.gene062959	PPI
MS.gene003583	MS.gene062959	PPI
MS.gene057790	MS.gene062959	PPI
MS.gene062952	MS.gene062959	PPI
MS.gene003624	MS.gene062959	PPI
MS.gene031199	MS.gene062959	PPI
MS.gene75314	MS.gene062959	PPI
MS.gene057797	MS.gene062959	PPI
MS.gene77529	MS.gene062959	PPI
MS.gene68761	MS.gene062959	PPI
MS.gene014667	MS.gene062959	PPI
MS.gene68760	MS.gene062959	PPI
MS.gene062959	MS.gene014669	PPI
MS.gene062959	MS.gene057808	PPI
MS.gene003596	MS.gene062959	PPI
MS.gene75676	MS.gene062959	PPI
MS.gene50665	MS.gene062959	PPI
MS.gene003586	MS.gene062959	PPI
MS.gene057778	MS.gene062959	PPI
MS.gene062988	MS.gene062959	PPI
MS.gene75673	MS.gene062959	PPI
MS.gene045366	MS.gene062959	PPI
MS.gene062963	MS.gene062959	PPI
MS.gene062959	MS.gene68163	PPI
MS.gene77528	MS.gene062959	PPI
MS.gene031198	MS.gene062959	PPI
MS.gene75674	MS.gene062959	PPI
MS.gene031200	MS.gene062959	PPI
MS.gene045365	MS.gene062959	PPI
MS.gene045364	MS.gene062959	PPI
MS.gene003602	MS.gene062959	PPI
MS.gene23372	MS.gene062959	PPI
MS.gene062959	MS.gene014222	PPI
MS.gene062959	MS.gene79888	PPI
MS.gene75316	MS.gene062959	PPI
MS.gene003627	MS.gene062959	PPI
MS.gene003577	MS.gene062959	PPI
MS.gene062959	MS.gene75678	PPI
MS.gene77524	MS.gene062959	PPI
MS.gene062984	MS.gene062959	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062959.t1	MTR_4g072490	92.941	85	6	0	1	85	1	85	1.09e-56	169
MS.gene062959.t1	MTR_4g072740	91.765	85	7	0	1	85	1	85	1.63e-54	164
MS.gene062959.t1	MTR_4g072465	87.209	86	10	1	1	85	1	86	1.45e-51	156
MS.gene062959.t1	MTR_4g072630	86.047	86	11	1	1	85	1	86	3.10e-51	155
MS.gene062959.t1	MTR_4g072470	88.235	85	10	0	1	85	1	85	3.18e-51	155
MS.gene062959.t1	MTR_4g072580	84.706	85	13	0	1	85	1	85	3.42e-50	152
MS.gene062959.t1	MTR_4g072370	81.818	88	13	1	1	85	1	88	3.23e-48	148
MS.gene062959.t1	MTR_4g072670	89.535	86	8	1	1	85	1	86	5.24e-48	147
MS.gene062959.t1	MTR_4g072600	81.176	85	16	0	1	85	1	85	9.88e-48	146
MS.gene062959.t1	MTR_4g072830	82.759	87	12	1	1	84	1	87	2.07e-47	145
MS.gene062959.t1	MTR_4g072540	84.884	86	12	1	1	85	1	86	5.69e-46	142
MS.gene062959.t1	MTR_4g072720	84.884	86	12	1	1	85	1	86	7.41e-46	142
MS.gene062959.t1	MTR_4g072330	77.273	88	17	1	1	85	1	88	9.84e-46	141
MS.gene062959.t1	MTR_3g084170	74.444	90	18	1	1	85	1	90	2.20e-45	140
MS.gene062959.t1	MTR_4g072510	83.721	86	13	1	1	85	1	86	2.53e-45	140
MS.gene062959.t1	MTR_4g072610	80.000	85	16	1	1	85	1	84	3.12e-45	140
MS.gene062959.t1	MTR_4g072590	87.059	85	11	0	1	85	1	85	1.25e-44	139
MS.gene062959.t1	MTR_5g008350	86.486	74	10	0	1	74	1	74	1.30e-44	138
MS.gene062959.t1	MTR_4g072450	89.412	85	9	0	1	85	1	85	1.41e-44	138
MS.gene062959.t1	MTR_4g072690	88.235	85	10	0	1	85	1	85	1.49e-44	138
MS.gene062959.t1	MTR_3g084150	73.626	91	17	2	1	85	1	90	1.75e-44	138
MS.gene062959.t1	MTR_3g084240	73.333	90	19	1	1	85	1	90	2.60e-44	138
MS.gene062959.t1	MTR_8g461410	72.527	91	18	2	1	85	1	90	4.97e-44	137
MS.gene062959.t1	MTR_4g050700	72.527	91	19	1	1	85	1	91	5.97e-44	137
MS.gene062959.t1	MTR_2g012410	72.527	91	19	1	1	85	1	91	5.97e-44	137
MS.gene062959.t1	MTR_3g084220	72.222	90	20	1	1	85	1	90	6.26e-44	137
MS.gene062959.t1	MTR_3g084180	72.527	91	18	2	1	85	1	90	1.16e-43	136
MS.gene062959.t1	MTR_4g072650	77.647	85	18	1	1	85	1	84	1.21e-43	136
MS.gene062959.t1	MTR_3g110032	71.429	91	20	1	1	85	1	91	2.35e-43	135
MS.gene062959.t1	MTR_3g110038	71.111	90	21	1	1	85	1	90	3.32e-43	135
MS.gene062959.t1	MTR_4g072380	76.744	86	19	1	1	85	1	86	7.28e-43	134
MS.gene062959.t1	MTR_4g072870	70.330	91	21	1	1	85	1	91	7.58e-43	134
MS.gene062959.t1	MTR_3g110042	75.556	90	15	2	1	84	1	89	2.53e-42	133
MS.gene062959.t1	MTR_4g072860	74.725	91	17	1	1	85	1	91	2.87e-42	133
MS.gene062959.t1	MTR_4g072880	69.231	91	22	1	1	85	1	91	8.24e-42	132
MS.gene062959.t1	MTR_4g072250	74.725	91	16	2	1	85	1	90	1.11e-41	131
MS.gene062959.t1	MTR_4g072310	70.330	91	21	1	1	85	1	91	1.28e-41	131
MS.gene062959.t1	MTR_3g084260	70.330	91	21	1	1	85	1	91	4.22e-41	130
MS.gene062959.t1	MTR_4g072480	68.889	90	23	1	1	85	1	90	6.57e-41	129
MS.gene062959.t1	MTR_4g072850	72.826	92	18	1	1	85	1	92	7.53e-41	129
MS.gene062959.t1	MTR_4g072820	75.581	86	19	2	1	85	1	85	9.13e-41	129
MS.gene062959.t1	MTR_4g072620	67.778	90	24	1	1	85	1	90	2.51e-40	128
MS.gene062959.t1	MTR_4g072270	67.033	91	24	1	1	85	1	91	1.24e-39	126
MS.gene062959.t1	MTR_4g072680	67.778	90	24	1	1	85	1	90	1.34e-39	126
MS.gene062959.t1	MTR_4g072240	64.835	91	26	1	1	85	1	91	2.11e-39	125
MS.gene062959.t1	MTR_4g072660	67.059	85	28	0	1	85	1	85	4.05e-39	125
MS.gene062959.t1	MTR_4g072570	70.000	90	22	1	1	85	1	90	4.44e-39	125
MS.gene062959.t1	MTR_3g117630	70.455	88	20	1	4	85	3	90	9.46e-39	124
MS.gene062959.t1	MTR_4g072220	64.835	91	26	1	1	85	1	91	1.03e-38	124
MS.gene062959.t1	MTR_4g072730	65.556	90	26	1	1	85	1	90	1.07e-38	124
MS.gene062959.t1	MTR_4g072500	68.132	91	22	2	1	85	1	90	1.34e-38	124
MS.gene062959.t1	MTR_4g072890	63.736	91	27	1	1	85	1	91	1.47e-38	123
MS.gene062959.t1	MTR_3g084250	66.667	90	25	1	1	85	1	90	3.42e-38	122
MS.gene062959.t1	MTR_4g072460	65.556	90	26	1	1	85	1	90	3.73e-38	122
MS.gene062959.t1	MTR_4g072230	69.231	91	20	2	1	85	1	89	5.14e-38	122
MS.gene062959.t1	MTR_4g072640	68.132	91	22	2	1	85	1	90	6.38e-38	122
MS.gene062959.t1	MTR_4g072530	67.033	91	23	2	1	85	1	90	6.87e-38	122
MS.gene062959.t1	MTR_4g072260	62.637	91	28	1	1	85	1	91	7.92e-38	122
MS.gene062959.t1	MTR_4g072300	62.637	91	28	1	1	85	1	91	9.00e-38	121
MS.gene062959.t1	MTR_3g084210	66.667	90	25	1	1	85	1	90	2.38e-37	120
MS.gene062959.t1	MTR_5g008360	71.795	78	22	0	8	85	4	81	3.24e-37	120
MS.gene062959.t1	MTR_8g461420	66.667	90	25	1	1	85	1	90	5.66e-37	119
MS.gene062959.t1	MTR_3g084190	65.556	90	26	1	1	85	1	90	8.31e-37	119
MS.gene062959.t1	MTR_3g084230	65.556	90	26	1	1	85	1	90	1.95e-36	118
MS.gene062959.t1	MTR_3g084160	65.934	91	24	2	1	85	1	90	1.13e-35	116
MS.gene062959.t1	MTR_4g072940	68.889	90	21	1	3	85	33	122	1.23e-35	117
MS.gene062959.t1	MTR_5g008370	68.889	90	23	2	1	85	1	90	2.41e-35	117
MS.gene062959.t1	MTR_3g110045	67.045	88	24	1	3	85	62	149	7.42e-35	116
MS.gene062959.t1	MTR_3g084200	69.444	72	17	1	1	67	1	72	1.67e-32	108
MS.gene062959.t1	MTR_4g072980	56.522	92	32	2	1	84	1	92	2.77e-32	108
MS.gene062959.t1	MTR_4g072560	52.577	97	33	2	1	84	1	97	3.58e-31	105
MS.gene062959.t1	MTR_4g072770	72.727	66	18	0	20	85	15	80	7.32e-31	103
MS.gene062959.t1	MTR_4g072910	65.278	72	25	0	14	85	29	100	1.40e-30	103
MS.gene062959.t1	MTR_3g117640	49.000	100	36	2	1	85	1	100	2.83e-29	100
MS.gene062959.t1	MTR_4g072550	64.789	71	25	0	15	85	31	101	4.55e-29	100
MS.gene062959.t1	MTR_4g072290	57.647	85	28	1	1	85	1	77	6.69e-27	94.0
MS.gene062959.t1	MTR_3g110035	64.062	64	23	0	22	85	73	136	2.64e-25	91.7
MS.gene062959.t1	MTR_4g072750	77.778	54	12	0	13	66	20	73	3.53e-25	89.7
MS.gene062959.t1	MTR_4g072190	53.659	82	33	2	5	82	17	97	1.60e-23	85.9
MS.gene062959.t1	MTR_6g077850	56.716	67	29	0	19	85	33	99	1.77e-23	85.9
MS.gene062959.t1	MTR_3g117610	60.000	65	25	1	18	82	43	106	3.77e-23	85.5
MS.gene062959.t1	MTR_4g072280	56.000	75	27	1	1	69	1	75	3.95e-23	84.3
MS.gene062959.t1	MTR_3g113310	55.224	67	29	1	18	84	40	105	1.87e-22	83.6
MS.gene062959.t1	MTR_4g072930	48.750	80	36	2	11	85	31	110	6.83e-21	79.7
MS.gene062959.t1	MTR_8g461400	47.778	90	16	2	1	85	1	64	2.27e-20	77.0
MS.gene062959.t1	MTR_4g072840	52.326	86	14	3	1	85	1	60	2.72e-20	76.6
MS.gene062959.t1	MTR_5g021820	53.030	66	30	1	19	84	39	103	3.27e-19	75.1
MS.gene062959.t1	MTR_8g076040	54.688	64	28	1	19	82	40	102	7.53e-19	74.3
MS.gene062959.t1	MTR_2g043960	57.627	59	24	1	19	77	75	132	4.84e-18	73.9
MS.gene062959.t1	MTR_4g124750	55.932	59	25	1	19	77	68	125	1.07e-17	72.8
MS.gene062959.t1	MTR_1g009150	52.174	69	32	1	12	80	63	130	2.68e-16	69.7
MS.gene062959.t1	MTR_1g094750	53.226	62	28	1	19	80	49	109	5.29e-16	67.4
MS.gene062959.t1	MTR_4g005310	46.970	66	34	1	16	80	58	123	2.72e-15	66.6
MS.gene062959.t1	MTR_1g061570	53.030	66	30	1	19	84	18	82	4.26e-15	65.5
MS.gene062959.t1	MTR_7g118010	47.059	68	33	2	20	85	23	89	6.06e-15	64.3
MS.gene062959.t1	MTR_7g101740	50.000	64	31	1	19	82	39	101	6.26e-15	64.7
MS.gene062959.t1	MTR_3g105900	65.909	44	15	0	17	60	1169	1212	9.76e-15	67.8
MS.gene062959.t1	MTR_1g063950	46.774	62	32	1	19	80	47	107	1.20e-14	63.9
MS.gene062959.t1	MTR_3g092220	37.647	85	50	2	3	85	16	99	1.59e-14	63.5
MS.gene062959.t1	MTR_5g008380	90.625	32	3	0	54	85	246	277	3.16e-14	65.5
MS.gene062959.t1	MTR_1g024085	52.542	59	27	1	19	77	36	93	3.73e-14	63.5
MS.gene062959.t1	MTR_4g005320	49.180	61	30	1	20	80	70	129	5.18e-14	63.5
MS.gene062959.t1	MTR_4g025830	44.118	68	34	2	20	84	79	145	7.74e-14	62.8
MS.gene062959.t1	MTR_3g109160	45.455	77	41	1	4	80	53	128	2.53e-13	61.6
MS.gene062959.t1	MTR_0388s0020	41.558	77	41	2	11	84	66	141	2.64e-13	61.2
MS.gene062959.t1	MTR_4g072160	50.000	62	30	1	19	80	36	96	4.55e-13	60.5
MS.gene062959.t1	MTR_8g461210	49.153	59	29	1	19	77	34	91	1.14e-12	58.9
MS.gene062959.t1	MTR_8g026730	41.176	68	37	2	20	85	27	93	1.34e-12	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062959.t1	AT4G38840	72.059	68	18	1	19	85	32	99	2.06e-33	110
MS.gene062959.t1	AT4G34810	66.234	77	22	1	11	83	39	115	1.08e-30	104
MS.gene062959.t1	AT4G34800	58.621	87	32	2	1	83	1	87	5.43e-30	102
MS.gene062959.t1	AT5G18050	59.459	74	29	1	13	85	17	90	8.47e-30	101
MS.gene062959.t1	AT5G18060	60.811	74	28	1	13	85	17	90	1.29e-29	101
MS.gene062959.t1	AT2G21210	57.895	76	30	1	12	85	20	95	1.43e-29	101
MS.gene062959.t1	AT4G38850	59.259	81	26	2	8	85	13	89	1.66e-29	100
MS.gene062959.t1	AT5G18020	61.972	71	26	1	13	82	17	87	3.43e-29	100
MS.gene062959.t1	AT5G18080	56.962	79	32	2	8	85	13	90	4.89e-29	99.8
MS.gene062959.t1	AT4G38825	59.722	72	28	1	15	85	18	89	8.50e-29	99.0
MS.gene062959.t1	AT2G21200	57.895	76	31	1	10	84	11	86	9.84e-29	99.0
MS.gene062959.t1	AT2G21210	57.895	76	30	1	12	85	87	162	1.01e-28	101
MS.gene062959.t1	AT5G18030	56.962	79	30	2	8	85	13	88	1.20e-28	98.6
MS.gene062959.t1	AT5G18010	54.430	79	34	2	8	85	13	90	3.18e-27	95.1
MS.gene062959.t1	AT4G34770	55.952	84	32	2	4	85	22	102	2.56e-26	93.2
MS.gene062959.t1	AT4G13790	47.619	84	42	1	3	84	8	91	3.62e-26	92.4
MS.gene062959.t1	AT3G03820	54.545	77	32	1	12	85	19	95	6.47e-26	92.0
MS.gene062959.t1	AT3G03850	62.687	67	23	1	21	85	26	92	1.43e-25	90.9
MS.gene062959.t1	AT3G03840	56.944	72	29	1	16	85	23	94	2.22e-25	90.5
MS.gene062959.t1	AT3G03830	55.263	76	31	1	13	85	17	92	7.67e-25	89.4
MS.gene062959.t1	AT4G34790	63.636	66	22	1	20	83	39	104	1.17e-24	89.4
MS.gene062959.t1	AT4G38860	49.451	91	36	1	5	85	15	105	1.36e-23	86.3
MS.gene062959.t1	AT4G34780	57.746	71	27	1	17	84	25	95	7.25e-23	84.7
MS.gene062959.t1	AT2G21220	58.462	65	26	1	18	82	38	101	5.98e-22	82.0
MS.gene062959.t1	AT1G75580	47.619	84	43	1	1	84	25	107	2.00e-21	80.9
MS.gene062959.t1	AT4G34760	56.923	65	27	1	18	82	41	104	6.77e-21	79.7
MS.gene062959.t1	AT2G16580	55.385	65	28	1	18	82	42	105	3.03e-20	78.2
MS.gene062959.t1	AT4G36110	47.674	86	36	2	5	82	17	101	1.23e-19	76.3
MS.gene062959.t1	AT1G19830	53.731	67	30	1	18	84	46	111	3.27e-19	75.5
MS.gene062959.t1	AT2G18010	53.125	64	29	1	19	82	47	109	1.66e-18	73.6
MS.gene062959.t1	AT3G43120	55.932	59	25	1	19	77	78	135	1.94e-18	74.7
MS.gene062959.t1	AT5G20810	57.627	59	24	1	19	77	78	135	1.36e-17	72.8
MS.gene062959.t1	AT5G20810	57.627	59	24	1	19	77	78	135	2.06e-17	72.8
MS.gene062959.t1	AT5G66260	45.652	92	41	3	2	85	8	98	3.81e-16	67.4
MS.gene062959.t1	AT3G20220	51.613	62	28	2	20	80	47	107	1.85e-15	66.2
MS.gene062959.t1	AT3G61900	40.964	83	45	2	6	85	16	97	2.62e-15	66.2
MS.gene062959.t1	AT3G51200	45.122	82	39	3	8	84	23	103	9.73e-15	63.9
MS.gene062959.t1	AT2G37030	50.794	63	30	1	19	81	48	109	1.04e-14	64.3
MS.gene062959.t1	AT4G34750	40.541	74	43	1	9	82	26	98	2.27e-14	63.9
MS.gene062959.t1	AT4G34750	40.541	74	43	1	9	82	26	98	2.27e-14	63.9
MS.gene062959.t1	AT2G46690	44.444	72	36	2	9	77	13	83	3.02e-14	63.2
MS.gene062959.t1	AT1G75590	50.847	59	28	1	19	77	41	98	7.27e-14	62.8
MS.gene062959.t1	AT2G24400	49.315	73	35	2	9	80	52	123	2.80e-13	62.0
MS.gene062959.t1	AT5G10990	49.153	59	29	1	19	77	40	97	2.99e-13	61.2
MS.gene062959.t1	AT1G19840	48.529	68	32	2	12	77	31	97	3.87e-13	60.8
MS.gene062959.t1	AT4G31320	46.575	73	37	2	9	80	68	139	4.20e-13	61.6
MS.gene062959.t1	AT3G53250	46.032	63	30	1	19	81	51	109	4.86e-13	60.1
MS.gene062959.t1	AT3G53250	46.032	63	30	1	19	81	82	140	8.86e-13	60.1
MS.gene062959.t1	AT2G45210	46.667	60	28	2	16	72	75	133	6.75e-12	57.8
MS.gene062959.t1	AT4G00880	42.857	77	39	3	3	77	13	86	1.12e-11	56.6
MS.gene062959.t1	AT4G12410	45.714	70	30	3	20	82	76	144	1.24e-11	57.0
MS.gene062959.t1	AT3G12830	38.272	81	49	1	5	85	35	114	1.65e-11	56.2
MS.gene062959.t1	AT3G60690	50.000	56	24	2	20	72	88	142	1.74e-11	57.0

Find 19 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTGGCTCAACAATTCT+TGG	0.248657	4.2:+35526421	None:intergenic
GTTTGGTTCAAATATGATAT+AGG	0.387729	4.2:+35526450	None:intergenic
ACAATTCTTGGAATGAGGTT+TGG	0.392315	4.2:+35526433	None:intergenic
GCTCAACAATTCTTGGAATG+AGG	0.458184	4.2:+35526428	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.477829	4.2:+35526504	None:intergenic
ATTCAAATTGTTCCTCAGCT+TGG	0.481982	4.2:+35526406	None:intergenic
GACATCATCTTCAAAAGTTG+TGG	0.500110	4.2:-35526532	MS.gene062959:CDS
AAAAGTTGTGGACGTTCCAA+AGG	0.530601	4.2:-35526520	MS.gene062959:CDS
TTTGAATACGACCATCCAAT+GGG	0.536776	4.2:-35526390	MS.gene062959:CDS
GTTTACCTAGTATCATCAAA+AGG	0.538666	4.2:-35526554	MS.gene062959:CDS
ATTTGAATACGACCATCCAA+TGG	0.549140	4.2:-35526391	MS.gene062959:CDS
AAAGTTGTGGACGTTCCAAA+GGG	0.571238	4.2:-35526519	MS.gene062959:CDS
AAGAAAACTTCTTCTCTGCA+AGG	0.584904	4.2:+35526354	None:intergenic
TAGTGAGACCACCCATTGGA+TGG	0.596413	4.2:+35526379	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.2:+35526375	None:intergenic
AGAATTGTTGAGCCAAGCTG+AGG	0.641874	4.2:-35526418	MS.gene062959:CDS
GAATACGACCATCCAATGGG+TGG	0.687778	4.2:-35526387	MS.gene062959:CDS
GGATATCTAGCAGTGTACGT+AGG	0.713792	4.2:-35526498	MS.gene062959:CDS
ACGTAGGAGAGAAAATGAAG+CGG	0.744637	4.2:-35526482	MS.gene062959:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTTGGTTCAAATATGATAT+AGG	+	chr4.2:35526446-35526465	None:intergenic	25.0%
!!!	TTTTGATGATACTAGGTAAA+CGG	+	chr4.2:35526340-35526359	None:intergenic	25.0%
	GTTTACCTAGTATCATCAAA+AGG	-	chr4.2:35526339-35526358	MS.gene062959:CDS	30.0%
	AAGAAAACTTCTTCTCTGCA+AGG	+	chr4.2:35526542-35526561	None:intergenic	35.0%
	ACAATTCTTGGAATGAGGTT+TGG	+	chr4.2:35526463-35526482	None:intergenic	35.0%
	ATTCAAATTGTTCCTCAGCT+TGG	+	chr4.2:35526490-35526509	None:intergenic	35.0%
	ATTTGAATACGACCATCCAA+TGG	-	chr4.2:35526502-35526521	MS.gene062959:CDS	35.0%
	GACATCATCTTCAAAAGTTG+TGG	-	chr4.2:35526361-35526380	MS.gene062959:CDS	35.0%
	TTTGAATACGACCATCCAAT+GGG	-	chr4.2:35526503-35526522	MS.gene062959:CDS	35.0%
!!	GATGTCCTTTTGATGATACT+AGG	+	chr4.2:35526347-35526366	None:intergenic	35.0%
	AAAAGTTGTGGACGTTCCAA+AGG	-	chr4.2:35526373-35526392	MS.gene062959:CDS	40.0%
	AAAGTTGTGGACGTTCCAAA+GGG	-	chr4.2:35526374-35526393	MS.gene062959:CDS	40.0%
	ACGTAGGAGAGAAAATGAAG+CGG	-	chr4.2:35526411-35526430	MS.gene062959:CDS	40.0%
	GCTCAACAATTCTTGGAATG+AGG	+	chr4.2:35526468-35526487	None:intergenic	40.0%
	TACACTGCTAGATATCCCTT+TGG	+	chr4.2:35526392-35526411	None:intergenic	40.0%
	AGAATTGTTGAGCCAAGCTG+AGG	-	chr4.2:35526475-35526494	MS.gene062959:CDS	45.0%
	CAGCTTGGCTCAACAATTCT+TGG	+	chr4.2:35526475-35526494	None:intergenic	45.0%
	GGATATCTAGCAGTGTACGT+AGG	-	chr4.2:35526395-35526414	MS.gene062959:CDS	45.0%
	GAATACGACCATCCAATGGG+TGG	-	chr4.2:35526506-35526525	MS.gene062959:CDS	50.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.2:35526521-35526540	None:intergenic	50.0%
	TAGTGAGACCACCCATTGGA+TGG	+	chr4.2:35526517-35526536	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35526329	35526586	35526329	ID=MS.gene062959
chr4.2	mRNA	35526329	35526586	35526329	ID=MS.gene062959.t1;Parent=MS.gene062959
chr4.2	exon	35526329	35526586	35526329	ID=MS.gene062959.t1.exon1;Parent=MS.gene062959.t1
chr4.2	CDS	35526329	35526586	35526329	ID=cds.MS.gene062959.t1;Parent=MS.gene062959.t1

Gene Sequence	>MS.gene062959 ATGGGTTTCCGTTTACCTAGTATCATCAAAAGGACATCATCTTCAAAAGTTGTGGACGTTCCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATTCCTATATCATATTTGAACCAAACCTCATTCCAAGAATTGTTGAGCCAAGCTGAGGAACAATTTGAATACGACCATCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGAAGTTTTCTTAGATATCACTTCTAGCTTGAATTAG
Protein sequence	>MS.gene062959.t1 MGFRLPSIIKRTSSSKVVDVPKGYLAVYVGEKMKRFVIPISYLNQTSFQELLSQAEEQFEYDHPMGGLTIPCREEVFLDITSSLN